Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:54:58 (63570): wrapper (7.7.26015): starting
08:54:58 (63570): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:54:58] Arguments: --nthreads 8
[2025-06-04 08:54:58] Threads: 8
[2025-06-04 08:54:58] Checking for CVMFS
[2025-06-04 08:54:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:54:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:54:58] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:54:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:54:59] 2.11.2.0 73730 11012 342072 146780 2 323 15631671 18432000 16807 130560 0 89668752 99.408 112484249 72250 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 08:54:59] CVMFS is ok
[2025-06-04 08:54:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:54:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:54:59] Further information can be found at the LHC@home message board.
[2025-06-04 08:54:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:54:59] Checking for apptainer binary...
[2025-06-04 08:54:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:54:59] Running /usr/bin/apptainer --version
[2025-06-04 08:54:59] apptainer version 1.3.2-1.el7
[2025-06-04 08:54:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:55:01] c-212-10.aglt2.org
[2025-06-04 08:55:01] apptainer works
[2025-06-04 08:55:01] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:55:01] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:55:01] Starting ATLAS job with PandaID=6678363884
[2025-06-04 08:55:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:17:55]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:17:55]  is_tar=False
[2025-06-04 10:17:55]  lfn=log.45006595._053759.job.log.tgz.1
[2025-06-04 10:17:55]  mtime=0
[2025-06-04 10:17:55]  protocol_id=None
[2025-06-04 10:17:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:17:55]  replicas=None
[2025-06-04 10:17:55]  scope=mc23_13p6TeV
[2025-06-04 10:17:55]  status=None
[2025-06-04 10:17:55]  status_code=0
[2025-06-04 10:17:55]  storage_token=
[2025-06-04 10:17:55]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6678363884/log.45006595._053759.job.log.tgz.1
[2025-06-04 10:17:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/b2/log.45006595._053759.job.log.tgz.1
[2025-06-04 10:17:55]  workdir=None
[2025-06-04 10:17:55] ]
[2025-06-04 10:17:55] 2025-06-04 14:17:25,766 | INFO     | transferring file log.45006595._053759.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6678363884/log.45006595._053759.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:17:55] 2025-06-04 14:17:25,766 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6678363884/log.45006595._053759.job.log.tgz.1 /tmp/boinchome/slots/3/log.45006595._053759.job
[2025-06-04 10:17:55] 2025-06-04 14:17:25,787 | INFO     | adding to output.list: log.45006595._053759.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/b2/log.45006595._053759.job.log.tg
[2025-06-04 10:17:55] 2025-06-04 14:17:25,788 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:17:55] 2025-06-04 14:17:25,788 | INFO     | summary of transferred files:
[2025-06-04 10:17:55] 2025-06-04 14:17:25,788 | INFO     |  -- lfn=log.45006595._053759.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:17:55] 2025-06-04 14:17:25,788 | INFO     | stage-out finished correctly
[2025-06-04 10:17:55] 2025-06-04 14:17:26,155 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:17:55] 2025-06-04 14:17:26,235 | INFO     | job 6678363884 has state=finished
[2025-06-04 10:17:55] 2025-06-04 14:17:26,236 | INFO     | preparing for final server update for job 6678363884 in state='finished'
[2025-06-04 10:17:55] 2025-06-04 14:17:26,236 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:17:55] 2025-06-04 14:17:26,236 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:17:55] 2025-06-04 14:17:26,236 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:17:55] 2025-06-04 14:17:26,236 | INFO     | job 6678363884 has finished - writing final server update
[2025-06-04 10:17:55] 2025-06-04 14:17:26,236 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:17:55] 2025-06-04 14:17:26,241 | INFO     | executing command: lscpu
[2025-06-04 10:17:55] 2025-06-04 14:17:26,285 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:17:55] 2025-06-04 14:17:27,695 | INFO     | PID=71123 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 10:17:55] 2025-06-04 14:17:27,695 | INFO     | .. there are 18 such processes running
[2025-06-04 10:17:55] 2025-06-04 14:17:30,997 | WARNING  | process 80368 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 10:17:55] 2025-06-04 14:17:30,997 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6678363884/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:17:55] 2025-06-04 14:17:31,304 | INFO     | number of running child processes to parent process 80368: 1
[2025-06-04 10:17:55] 2025-06-04 14:17:31,305 | INFO     | maximum number of monitored processes: 6
[2025-06-04 10:17:55] 2025-06-04 14:17:33,810 | INFO     | monitor loop #380: job 0:6678363884 is in state 'finished'
[2025-06-04 10:17:55] 2025-06-04 14:17:33,810 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:17:55] 2025-06-04 14:17:34,720 | INFO     | 4918s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 10:17:55] 2025-06-04 14:17:35,082 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 10:17:55] 2025-06-04 14:17:35,083 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6678363884/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:17:55] 2025-06-04 14:17:35,084 | INFO     | extracted standard info from prmon json
[2025-06-04 10:17:55] 2025-06-04 14:17:35,084 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:17:55] 2025-06-04 14:17:35,084 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:17:55] 2025-06-04 14:17:35,084 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:17:55] 2025-06-04 14:17:35,084 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:17:55] 2025-06-04 14:17:35,086 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:17:55] 2025-06-04 14:17:35,086 | INFO     | sum of square deviations: 110960220.0
[2025-06-04 10:17:55] 2025-06-04 14:17:35,086 | INFO     | sum of deviations: 103193272.99999996
[2025-06-04 10:17:55] 2025-06-04 14:17:35,086 | INFO     | mean x: 1749044331.0
[2025-06-04 10:17:55] 2025-06-04 14:17:35,086 | INFO     | mean y: 2482403.9577464787
[2025-06-04 10:17:55] 2025-06-04 14:17:35,086 | INFO     | -- intersect: -1624133054.609164
[2025-06-04 10:17:55] 2025-06-04 14:17:35,086 | INFO     | intersect: -1624133054.609164
[2025-06-04 10:17:55] 2025-06-04 14:17:35,087 | INFO     | chi2: 0.005467818391588308
[2025-06-04 10:17:55] 2025-06-04 14:17:35,087 | INFO     | -- intersect: -1624133054.609164
[2025-06-04 10:17:55] 2025-06-04 14:17:35,087 | INFO     | current memory leak: 0.93 B/s (using 71 data points, chi2=0.01)
[2025-06-04 10:17:55] 2025-06-04 14:17:35,087 | INFO     | ..............................
[2025-06-04 10:17:55] 2025-06-04 14:17:35,087 | INFO     | . Timing measurements:
[2025-06-04 10:17:55] 2025-06-04 14:17:35,087 | INFO     | . get job = 0 s
[2025-06-04 10:17:55] 2025-06-04 14:17:35,087 | INFO     | . initial setup = 2 s
[2025-06-04 10:17:55] 2025-06-04 14:17:35,087 | INFO     | . payload setup = 62 s
[2025-06-04 10:17:55] 2025-06-04 14:17:35,088 | INFO     | . stage-in = 0 s
[2025-06-04 10:17:55] 2025-06-04 14:17:35,088 | INFO     | . payload execution = 4785 s
[2025-06-04 10:17:55] 2025-06-04 14:17:35,088 | INFO     | . stage-out = 0 s
[2025-06-04 10:17:55] 2025-06-04 14:17:35,088 | INFO     | . log creation = 0 s
[2025-06-04 10:17:55] 2025-06-04 14:17:35,088 | INFO     | ..............................
[2025-06-04 10:17:55] 2025-06-04 14:17:35,232 | INFO     | 
[2025-06-04 10:17:55] 2025-06-04 14:17:35,232 | INFO     | job summary report
[2025-06-04 10:17:55] 2025-06-04 14:17:35,232 | INFO     | --------------------------------------------------
[2025-06-04 10:17:55] 2025-06-04 14:17:35,232 | INFO     | PanDA job id: 6678363884
[2025-06-04 10:17:55] 2025-06-04 14:17:35,232 | INFO     | task id: 45006595
[2025-06-04 10:17:55] 2025-06-04 14:17:35,232 | INFO     | errors: (none)
[2025-06-04 10:17:55] 2025-06-04 14:17:35,233 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:17:55] 2025-06-04 14:17:35,233 | INFO     | pilot state: finished 
[2025-06-04 10:17:55] 2025-06-04 14:17:35,233 | INFO     | transexitcode: 0
[2025-06-04 10:17:55] 2025-06-04 14:17:35,233 | INFO     | exeerrorcode: 0
[2025-06-04 10:17:55] 2025-06-04 14:17:35,233 | INFO     | exeerrordiag: 
[2025-06-04 10:17:55] 2025-06-04 14:17:35,233 | INFO     | exitcode: 0
[2025-06-04 10:17:55] 2025-06-04 14:17:35,233 | INFO     | exitmsg: OK
[2025-06-04 10:17:55] 2025-06-04 14:17:35,233 | INFO     | cpuconsumptiontime: 29312 s
[2025-06-04 10:17:55] 2025-06-04 14:17:35,233 | INFO     | nevents: 400
[2025-06-04 10:17:55] 2025-06-04 14:17:35,233 | INFO     | neventsw: 0
[2025-06-04 10:17:55] 2025-06-04 14:17:35,233 | INFO     | pid: 80368
[2025-06-04 10:17:55] 2025-06-04 14:17:35,233 | INFO     | pgrp: 80368
[2025-06-04 10:17:55] 2025-06-04 14:17:35,233 | INFO     | corecount: 8
[2025-06-04 10:17:55] 2025-06-04 14:17:35,233 | INFO     | event service: False
[2025-06-04 10:17:55] 2025-06-04 14:17:35,233 | INFO     | sizes: {0: 2397165, 1: 2397364, 11: 2397364, 22: 2397626, 4851: 2423636, 4852: 2432761, 4861: 2432875}
[2025-06-04 10:17:55] 2025-06-04 14:17:35,233 | INFO     | --------------------------------------------------
[2025-06-04 10:17:55] 2025-06-04 14:17:35,234 | INFO     | 
[2025-06-04 10:17:55] 2025-06-04 14:17:35,234 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-04 10:17:55] 2025-06-04 14:17:35,252 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:17:55] 2025-06-04 14:17:35,252 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:17:55] 2025-06-04 14:17:35,252 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:17:55] 2025-06-04 14:17:35,252 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:17:55] 2025-06-04 14:17:35,252 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:17:55] 2025-06-04 14:17:35,252 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:17:55] 2025-06-04 14:17:35,253 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:17:55] 2025-06-04 14:17:35,253 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:17:55] 2025-06-04 14:17:35,253 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:17:55] 2025-06-04 14:17:35,253 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:17:55] 2025-06-04 14:17:35,253 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:17:55] 2025-06-04 14:17:35,253 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:17:55] 2025-06-04 14:17:35,253 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:17:55] 2025-06-04 14:17:35,253 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:17:55] 2025-06-04 14:17:35,253 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:17:55] 2025-06-04 14:17:35,253 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:17:55] 2025-06-04 14:17:35,253 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:17:55] 2025-06-04 14:17:35,253 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:17:55] 2025-06-04 14:17:35,253 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:17:55] 2025-06-04 14:17:35,253 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:17:55] 2025-06-04 14:17:35,253 | INFO     | job 6678363884 has completed (purged errors)
[2025-06-04 10:17:55] 2025-06-04 14:17:35,254 | INFO     | overall cleanup function is called
[2025-06-04 10:17:55] 2025-06-04 14:17:36,261 | INFO     | --- collectZombieJob: --- 10, [80368]
[2025-06-04 10:17:55] 2025-06-04 14:17:36,261 | INFO     | zombie collector waiting for pid 80368
[2025-06-04 10:17:55] 2025-06-04 14:17:36,261 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:17:55] 2025-06-04 14:17:36,261 | INFO     | collected zombie processes
[2025-06-04 10:17:55] 2025-06-04 14:17:36,261 | INFO     | will attempt to kill all subprocesses of pid=80368
[2025-06-04 10:17:55] 2025-06-04 14:17:36,550 | INFO     | process IDs to be killed: [80368] (in reverse order)
[2025-06-04 10:17:55] 2025-06-04 14:17:36,684 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:17:55] 2025-06-04 14:17:36,684 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:17:55] 2025-06-04 14:17:36,694 | INFO     | did not find any defunct processes belonging to 80368
[2025-06-04 10:17:55] 2025-06-04 14:17:36,702 | INFO     | did not find any defunct processes belonging to 80368
[2025-06-04 10:17:55] 2025-06-04 14:17:36,702 | INFO     | ready for new job
[2025-06-04 10:17:55] 2025-06-04 14:17:36,703 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:17:55] 2025-06-04 14:17:36,704 | INFO     | **************************************
[2025-06-04 10:17:55] 2025-06-04 14:17:36,704 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:17:55] 2025-06-04 14:17:36,704 | INFO     | **************************************
[2025-06-04 10:17:55] 2025-06-04 14:17:36,704 | INFO     | 
[2025-06-04 10:17:55] 2025-06-04 14:17:36,709 | INFO     | architecture information:
[2025-06-04 10:17:55] 2025-06-04 14:17:36,709 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:17:55] 2025-06-04 14:17:36,796 | INFO     | cat /etc/os-release:
[2025-06-04 10:17:55] NAME="CentOS Linux"
[2025-06-04 10:17:55] VERSION="7 (Core)"
[2025-06-04 10:17:55] ID="centos"
[2025-06-04 10:17:55] ID_LIKE="rhel fedora"
[2025-06-04 10:17:55] VERSION_ID="7"
[2025-06-04 10:17:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:17:55] ANSI_COLOR="0;31"
[2025-06-04 10:17:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:17:55] HOME_URL="https://www.centos.org/"
[2025-06-04 10:17:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:17:55] 
[2025-06-04 10:17:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:17:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:17:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:17:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:17:55] 
[2025-06-04 10:17:55] 2025-06-04 14:17:36,797 | INFO     | **************************************
[2025-06-04 10:17:55] 2025-06-04 14:17:37,300 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-04 10:17:55] 2025-06-04 14:17:37,353 | INFO     | sufficient remaining disk space (103921221632 B)
[2025-06-04 10:17:55] 2025-06-04 14:17:37,353 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:17:55] 2025-06-04 14:17:37,353 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:17:55] 2025-06-04 14:17:37,353 | INFO     | update_server=False
[2025-06-04 10:17:55] 2025-06-04 14:17:37,354 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:17:55] 2025-06-04 14:17:37,354 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:17:55] 2025-06-04 14:17:37,354 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:17:55] 2025-06-04 14:17:37,354 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:17:55] 2025-06-04 14:17:37,354 | INFO     | aborting loop
[2025-06-04 10:17:55] 2025-06-04 14:17:37,354 | INFO     | all payload control threads have been joined
[2025-06-04 10:17:55] 2025-06-04 14:17:37,732 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:17:55] 2025-06-04 14:17:37,733 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:17:55] 2025-06-04 14:17:37,733 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:17:55] 2025-06-04 14:17:37,847 | INFO     | all data control threads have been joined
[2025-06-04 10:17:55] 2025-06-04 14:17:38,358 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:17:55] 2025-06-04 14:17:38,360 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:17:55] 2025-06-04 14:17:38,365 | INFO     | [payload] control thread has finished
[2025-06-04 10:17:55] 2025-06-04 14:17:38,609 | INFO     | [job] validate thread has finished
[2025-06-04 10:17:55] 2025-06-04 14:17:38,842 | INFO     | all job control threads have been joined
[2025-06-04 10:17:55] 2025-06-04 14:17:38,852 | INFO     | [data] control thread has finished
[2025-06-04 10:17:55] 2025-06-04 14:17:38,867 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:17:55] 2025-06-04 14:17:38,887 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:17:55] 2025-06-04 14:17:39,275 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:17:55] 2025-06-04 14:17:39,336 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:17:55] 2025-06-04 14:17:39,360 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:17:55] 2025-06-04 14:17:39,373 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:17:55] 2025-06-04 14:17:39,494 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:17:55] 2025-06-04 14:17:39,848 | INFO     | [job] control thread has finished
[2025-06-04 10:17:55] 2025-06-04 14:17:40,186 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:17:55] 2025-06-04 14:17:41,192 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:17:55] 2025-06-04 14:17:41,361 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:17:55] 2025-06-04 14:17:48,035 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:17:55] 2025-06-04 14:17:49,041 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:17:55] 2025-06-04 14:17:49,251 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140706097092416)>', '<ExcThread(monitor, started 140705653573376)>']
[2025-06-04 10:17:55] 2025-06-04 14:17:49,800 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:17:55] 2025-06-04 14:17:49,800 | INFO     | [monitor] control thread has ended
[2025-06-04 10:17:55] 2025-06-04 14:17:54,284 | INFO     | all workflow threads have been joined
[2025-06-04 10:17:55] 2025-06-04 14:17:54,284 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:17:55] 2025-06-04 14:17:54,284 | INFO     | traces error code: 0
[2025-06-04 10:17:55] 2025-06-04 14:17:54,284 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:17:55] 2025-06-04 14:17:54,601 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:17:55] 2025-06-04 14:17:54,608 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:17:55] 2025-06-04 14:17:54,613 [wrapper] pilotpid: 71123
[2025-06-04 10:17:55] 2025-06-04 14:17:54,637 [wrapper] Pilot exit status: 0
[2025-06-04 10:17:55] 2025-06-04 14:17:54,735 [wrapper] pandaids: 6678363884
[2025-06-04 10:17:55] 2025-06-04 14:17:54,979 [wrapper] cleanup supervisor_pilot  3813 71124
[2025-06-04 10:17:55] 2025-06-04 14:17:55,013 [wrapper] Test setup, not cleaning
[2025-06-04 10:17:55] 2025-06-04 14:17:55,046 [wrapper] apfmon messages muted
[2025-06-04 10:17:55] 2025-06-04 14:17:55,067 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:17:55] 2025-06-04 14:17:55,071 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:17:55]  *** Error codes and diagnostics ***
[2025-06-04 10:17:55]     "exeErrorCode": 0,
[2025-06-04 10:17:55]     "exeErrorDiag": "",
[2025-06-04 10:17:55]     "pilotErrorCode": 0,
[2025-06-04 10:17:55]     "pilotErrorDiag": "",
[2025-06-04 10:17:55]  *** Listing of results directory ***
[2025-06-04 10:17:55] total 395648
[2025-06-04 10:17:55] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-04 10:17:55] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 01:57 queuedata.json
[2025-06-04 10:17:55] -rwx------ 1 boincer umatlas     37140 Jun  4 01:57 runpilot2-wrapper.sh
[2025-06-04 10:17:55] -rw-r--r-- 1 boincer umatlas       100 Jun  4 08:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:17:55] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 08:54 run_atlas
[2025-06-04 10:17:55] -rw-r--r-- 1 boincer umatlas       105 Jun  4 08:54 job.xml
[2025-06-04 10:17:55] -rw-r--r-- 2 boincer umatlas 215709344 Jun  4 08:54 EVNT.45006593._002152.pool.root.1
[2025-06-04 10:17:55] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:54 start_atlas.sh
[2025-06-04 10:17:55] drwxrwx--x 2 boincer umatlas      4096 Jun  4 08:54 shared
[2025-06-04 10:17:55] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 08:54 input.tar.gz
[2025-06-04 10:17:55] -rw-r--r-- 1 boincer umatlas         0 Jun  4 08:54 boinc_lockfile
[2025-06-04 10:17:55] -rw-r--r-- 1 boincer umatlas      2522 Jun  4 08:55 pandaJob.out
[2025-06-04 10:17:55] -rw------- 1 boincer umatlas    986811 Jun  4 08:55 agis_schedconf.cvmfs.json
[2025-06-04 10:17:55] -rw------- 1 boincer umatlas   1598969 Jun  4 08:55 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:17:55] drwx------ 4 boincer umatlas      4096 Jun  4 08:55 pilot3
[2025-06-04 10:17:55] -rw-r--r-- 1 boincer umatlas      6388 Jun  4 10:09 init_data.xml
[2025-06-04 10:17:55] -rw------- 1 boincer umatlas 184069095 Jun  4 10:16 HITS.45006595._053759.pool.root.1
[2025-06-04 10:17:55] -rw-r--r-- 1 boincer umatlas       530 Jun  4 10:17 boinc_task_state.xml
[2025-06-04 10:17:55] -rw------- 1 boincer umatlas        95 Jun  4 10:17 pilot_heartbeat.json
[2025-06-04 10:17:55] -rw------- 1 boincer umatlas      1065 Jun  4 10:17 memory_monitor_summary.json
[2025-06-04 10:17:55] -rw------- 1 boincer umatlas    293922 Jun  4 10:17 log.45006595._053759.job.log.tgz.1
[2025-06-04 10:17:55] -rw------- 1 boincer umatlas      7729 Jun  4 10:17 heartbeat.json
[2025-06-04 10:17:55] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 10:17 boinc_mmap_file
[2025-06-04 10:17:55] -rw-r--r-- 1 boincer umatlas        27 Jun  4 10:17 wrapper_checkpoint.txt
[2025-06-04 10:17:55] -rw------- 1 boincer umatlas      4426 Jun  4 10:17 pilotlog.txt
[2025-06-04 10:17:55] -rw------- 1 boincer umatlas    472111 Jun  4 10:17 log.45006595._053759.job.log.1
[2025-06-04 10:17:55] -rw------- 1 boincer umatlas       357 Jun  4 10:17 output.list
[2025-06-04 10:17:55] -rw-r--r-- 1 boincer umatlas       620 Jun  4 10:17 runtime_log
[2025-06-04 10:17:55] -rw------- 1 boincer umatlas    788480 Jun  4 10:17 result.tar.gz
[2025-06-04 10:17:55] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 10:17 runtime_log.err
[2025-06-04 10:17:55] -rw------- 1 boincer umatlas       658 Jun  4 10:17 6MFKDmoIwg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmFpaKDmIIhLQm.diag
[2025-06-04 10:17:55] -rw-r--r-- 1 boincer umatlas     21537 Jun  4 10:17 stderr.txt
[2025-06-04 10:17:55] HITS file was successfully produced:
[2025-06-04 10:17:55] -rw------- 1 boincer umatlas 184069095 Jun  4 10:16 shared/HITS.pool.root.1
[2025-06-04 10:17:55]  *** Contents of shared directory: ***
[2025-06-04 10:17:55] total 391704
[2025-06-04 10:17:55] -rw-r--r-- 2 boincer umatlas 215709344 Jun  4 08:54 ATLAS.root_0
[2025-06-04 10:17:55] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:54 start_atlas.sh
[2025-06-04 10:17:55] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 08:54 input.tar.gz
[2025-06-04 10:17:55] -rw------- 1 boincer umatlas 184069095 Jun  4 10:16 HITS.pool.root.1
[2025-06-04 10:17:55] -rw------- 1 boincer umatlas    788480 Jun  4 10:17 result.tar.gz
10:17:57 (63570): run_atlas exited; CPU time 29121.282996
10:17:57 (63570): called boinc_finish(0)

</stderr_txt>
]]>

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