Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
03:44:02 (1966189): wrapper (7.7.26015): starting
03:44:02 (1966189): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 03:44:02] Arguments: --nthreads 12
[2025-06-06 03:44:02] Threads: 12
[2025-06-06 03:44:02] Checking for CVMFS
[2025-06-06 03:44:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 03:44:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 03:44:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 03:44:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 03:44:02] 2.12.7.0 600724 4838 60264 146838 0 56 2215588 4096000 0 130560 0 3795541 99.991 1085196 218 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-06-06 03:44:02] CVMFS is ok
[2025-06-06 03:44:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 03:44:02] Checking for apptainer binary...
[2025-06-06 03:44:02] apptainer is not installed, using version from CVMFS
[2025-06-06 03:44:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 03:44:03] lithium
[2025-06-06 03:44:03] apptainer works
[2025-06-06 03:44:03] Set ATHENA_PROC_NUMBER=12
[2025-06-06 03:44:03] Set ATHENA_CORE_NUMBER=12
[2025-06-06 03:44:03] Starting ATLAS job with PandaID=6678866545
[2025-06-06 03:44:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 05:17:19]  *** The last 200 lines of the pilot log: ***
[2025-06-06 05:17:19] 2025-06-06 03:16:13,708 | INFO     | monitor loop #420: job 0:6678866545 is in state 'finished'
[2025-06-06 05:17:19] 2025-06-06 03:16:13,709 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:17:19] 2025-06-06 03:16:16,212 | INFO     | monitor loop #421: job 0:6678866545 is in state 'finished'
[2025-06-06 05:17:19] 2025-06-06 03:16:16,212 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:17:19] 2025-06-06 03:16:18,713 | INFO     | monitor loop #422: job 0:6678866545 is in state 'finished'
[2025-06-06 05:17:19] 2025-06-06 03:16:18,713 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:17:19] 2025-06-06 03:16:21,217 | INFO     | monitor loop #423: job 0:6678866545 is in state 'finished'
[2025-06-06 05:17:19] 2025-06-06 03:16:21,217 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:17:19] 2025-06-06 03:16:21,733 | INFO     | PID=1969904 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 05:17:19] 2025-06-06 03:16:23,721 | INFO     | monitor loop #424: job 0:6678866545 is in state 'finished'
[2025-06-06 05:17:19] 2025-06-06 03:16:23,722 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:17:19] 2025-06-06 03:16:26,225 | INFO     | monitor loop #425: job 0:6678866545 is in state 'finished'
[2025-06-06 05:17:19] 2025-06-06 03:16:26,225 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:17:19] 2025-06-06 03:16:28,728 | INFO     | monitor loop #426: job 0:6678866545 is in state 'finished'
[2025-06-06 05:17:19] 2025-06-06 03:16:28,729 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:17:19] 2025-06-06 03:16:31,232 | INFO     | monitor loop #427: job 0:6678866545 is in state 'finished'
[2025-06-06 05:17:19] 2025-06-06 03:16:31,232 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:17:19] 2025-06-06 03:16:33,733 | INFO     | monitor loop #428: job 0:6678866545 is in state 'finished'
[2025-06-06 05:17:19] 2025-06-06 03:16:33,734 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:17:19] 2025-06-06 03:16:36,237 | INFO     | monitor loop #429: job 0:6678866545 is in state 'finished'
[2025-06-06 05:17:19] 2025-06-06 03:16:36,238 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:17:19] 2025-06-06 03:16:38,741 | INFO     | monitor loop #430: job 0:6678866545 is in state 'finished'
[2025-06-06 05:17:19] 2025-06-06 03:16:38,741 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:17:19] 2025-06-06 03:16:41,245 | INFO     | monitor loop #431: job 0:6678866545 is in state 'finished'
[2025-06-06 05:17:19] 2025-06-06 03:16:41,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:17:19] 2025-06-06 03:16:43,749 | INFO     | monitor loop #432: job 0:6678866545 is in state 'finished'
[2025-06-06 05:17:19] 2025-06-06 03:16:43,750 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:17:19] 2025-06-06 03:16:43,880 | INFO     | PID=1969904 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 05:17:19] 2025-06-06 03:16:46,253 | INFO     | monitor loop #433: job 0:6678866545 is in state 'finished'
[2025-06-06 05:17:19] 2025-06-06 03:16:46,254 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:17:19] 2025-06-06 03:16:48,757 | INFO     | monitor loop #434: job 0:6678866545 is in state 'finished'
[2025-06-06 05:17:19] 2025-06-06 03:16:48,757 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:17:19] 2025-06-06 03:16:51,261 | INFO     | monitor loop #435: job 0:6678866545 is in state 'finished'
[2025-06-06 05:17:19] 2025-06-06 03:16:51,262 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:17:19] 2025-06-06 03:16:53,766 | INFO     | monitor loop #436: job 0:6678866545 is in state 'finished'
[2025-06-06 05:17:19] 2025-06-06 03:16:53,766 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:17:19] 2025-06-06 03:16:56,269 | INFO     | monitor loop #437: job 0:6678866545 is in state 'finished'
[2025-06-06 05:17:19] 2025-06-06 03:16:56,269 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:17:19] 2025-06-06 03:16:58,773 | INFO     | monitor loop #438: job 0:6678866545 is in state 'finished'
[2025-06-06 05:17:19] 2025-06-06 03:16:58,773 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:17:19] 2025-06-06 03:16:59,861 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-06 05:17:19] 2025-06-06 03:16:59,862 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6678866545/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 05:17:19] 2025-06-06 03:16:59,862 | INFO     | extracted standard info from prmon json
[2025-06-06 05:17:19] 2025-06-06 03:16:59,863 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 05:17:19] 2025-06-06 03:16:59,863 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 05:17:19] 2025-06-06 03:16:59,863 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 05:17:19] 2025-06-06 03:16:59,863 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 05:17:19] 2025-06-06 03:16:59,865 | INFO     | fitting pss+swap vs Time
[2025-06-06 05:17:19] 2025-06-06 03:16:59,865 | INFO     | sum of square deviations: 177275882.0
[2025-06-06 05:17:19] 2025-06-06 03:16:59,866 | INFO     | sum of deviations: -13735461072.999996
[2025-06-06 05:17:19] 2025-06-06 03:16:59,866 | INFO     | mean x: 1749177080.0
[2025-06-06 05:17:19] 2025-06-06 03:16:59,866 | INFO     | mean y: 2791111.7228915663
[2025-06-06 05:17:19] 2025-06-06 03:16:59,866 | INFO     | -- intersect: 135530271900.81184
[2025-06-06 05:17:19] 2025-06-06 03:16:59,866 | INFO     | intersect: 135530271900.81184
[2025-06-06 05:17:19] 2025-06-06 03:16:59,866 | INFO     | chi2: 0.18671620544643877
[2025-06-06 05:17:19] 2025-06-06 03:16:59,866 | INFO     | -- intersect: 135530271900.81184
[2025-06-06 05:17:19] 2025-06-06 03:16:59,866 | INFO     | current memory leak: -77.48 B/s (using 83 data points, chi2=0.19)
[2025-06-06 05:17:19] 2025-06-06 03:16:59,867 | INFO     | ..............................
[2025-06-06 05:17:19] 2025-06-06 03:16:59,867 | INFO     | . Timing measurements:
[2025-06-06 05:17:19] 2025-06-06 03:16:59,867 | INFO     | . get job = 0 s
[2025-06-06 05:17:19] 2025-06-06 03:16:59,867 | INFO     | . initial setup = 1 s
[2025-06-06 05:17:19] 2025-06-06 03:16:59,867 | INFO     | . payload setup = 5 s
[2025-06-06 05:17:19] 2025-06-06 03:16:59,867 | INFO     | . stage-in = 0 s
[2025-06-06 05:17:19] 2025-06-06 03:16:59,867 | INFO     | . payload execution = 5458 s
[2025-06-06 05:17:19] 2025-06-06 03:16:59,867 | INFO     | . stage-out = 0 s
[2025-06-06 05:17:19] 2025-06-06 03:16:59,868 | INFO     | . log creation = 0 s
[2025-06-06 05:17:19] 2025-06-06 03:16:59,868 | INFO     | ..............................
[2025-06-06 05:17:19] 2025-06-06 03:16:59,942 | INFO     | 
[2025-06-06 05:17:19] 2025-06-06 03:16:59,943 | INFO     | job summary report
[2025-06-06 05:17:19] 2025-06-06 03:16:59,943 | INFO     | --------------------------------------------------
[2025-06-06 05:17:19] 2025-06-06 03:16:59,943 | INFO     | PanDA job id: 6678866545
[2025-06-06 05:17:19] 2025-06-06 03:16:59,943 | INFO     | task id: 45006595
[2025-06-06 05:17:19] 2025-06-06 03:16:59,943 | INFO     | errors: (none)
[2025-06-06 05:17:19] 2025-06-06 03:16:59,943 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 05:17:19] 2025-06-06 03:16:59,943 | INFO     | pilot state: finished 
[2025-06-06 05:17:19] 2025-06-06 03:16:59,944 | INFO     | transexitcode: 0
[2025-06-06 05:17:19] 2025-06-06 03:16:59,944 | INFO     | exeerrorcode: 0
[2025-06-06 05:17:19] 2025-06-06 03:16:59,944 | INFO     | exeerrordiag: 
[2025-06-06 05:17:19] 2025-06-06 03:16:59,944 | INFO     | exitcode: 0
[2025-06-06 05:17:19] 2025-06-06 03:16:59,944 | INFO     | exitmsg: OK
[2025-06-06 05:17:19] 2025-06-06 03:16:59,944 | INFO     | cpuconsumptiontime: 57396 s
[2025-06-06 05:17:19] 2025-06-06 03:16:59,944 | INFO     | nevents: 400
[2025-06-06 05:17:19] 2025-06-06 03:16:59,944 | INFO     | neventsw: 0
[2025-06-06 05:17:19] 2025-06-06 03:16:59,944 | INFO     | pid: 1976538
[2025-06-06 05:17:19] 2025-06-06 03:16:59,944 | INFO     | pgrp: 1976538
[2025-06-06 05:17:19] 2025-06-06 03:16:59,944 | INFO     | corecount: 12
[2025-06-06 05:17:19] 2025-06-06 03:16:59,945 | INFO     | event service: False
[2025-06-06 05:17:19] 2025-06-06 03:16:59,945 | INFO     | sizes: {0: 2397019, 1: 2397274, 4: 2397480, 12: 2397508, 5467: 2424054, 5469: 2433009, 5471: 2433193, 5554: 2433363}
[2025-06-06 05:17:19] 2025-06-06 03:16:59,945 | INFO     | --------------------------------------------------
[2025-06-06 05:17:19] 2025-06-06 03:16:59,945 | INFO     | 
[2025-06-06 05:17:19] 2025-06-06 03:16:59,945 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-06 05:17:19] 2025-06-06 03:16:59,960 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 05:17:19] 2025-06-06 03:16:59,961 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 05:17:19] 2025-06-06 03:16:59,961 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 05:17:19] 2025-06-06 03:16:59,961 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 05:17:19] 2025-06-06 03:16:59,961 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 05:17:19] 2025-06-06 03:16:59,961 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 05:17:19] 2025-06-06 03:16:59,961 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 05:17:19] 2025-06-06 03:16:59,961 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 05:17:19] 2025-06-06 03:16:59,961 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 05:17:19] 2025-06-06 03:16:59,962 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 05:17:19] 2025-06-06 03:16:59,962 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 05:17:19] 2025-06-06 03:16:59,962 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 05:17:19] 2025-06-06 03:16:59,962 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 05:17:19] 2025-06-06 03:16:59,962 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 05:17:19] 2025-06-06 03:16:59,962 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 05:17:19] 2025-06-06 03:16:59,962 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 05:17:19] 2025-06-06 03:16:59,962 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 05:17:19] 2025-06-06 03:16:59,962 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 05:17:19] 2025-06-06 03:16:59,962 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 05:17:19] 2025-06-06 03:16:59,963 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 05:17:19] 2025-06-06 03:16:59,963 | INFO     | job 6678866545 has completed (purged errors)
[2025-06-06 05:17:19] 2025-06-06 03:16:59,963 | INFO     | overall cleanup function is called
[2025-06-06 05:17:19] 2025-06-06 03:17:00,965 | INFO     | --- collectZombieJob: --- 10, [1976538]
[2025-06-06 05:17:19] 2025-06-06 03:17:00,965 | INFO     | zombie collector waiting for pid 1976538
[2025-06-06 05:17:19] 2025-06-06 03:17:00,966 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 05:17:19] 2025-06-06 03:17:00,966 | INFO     | collected zombie processes
[2025-06-06 05:17:19] 2025-06-06 03:17:00,966 | INFO     | will attempt to kill all subprocesses of pid=1976538
[2025-06-06 05:17:19] 2025-06-06 03:17:01,046 | INFO     | process IDs to be killed: [1976538] (in reverse order)
[2025-06-06 05:17:19] 2025-06-06 03:17:01,081 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 05:17:19] 2025-06-06 03:17:01,082 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 05:17:19] 2025-06-06 03:17:01,084 | INFO     | did not find any defunct processes belonging to 1976538
[2025-06-06 05:17:19] 2025-06-06 03:17:01,087 | INFO     | did not find any defunct processes belonging to 1976538
[2025-06-06 05:17:19] 2025-06-06 03:17:01,087 | INFO     | ready for new job
[2025-06-06 05:17:19] 2025-06-06 03:17:01,087 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 05:17:19] 2025-06-06 03:17:01,088 | INFO     | **************************************
[2025-06-06 05:17:19] 2025-06-06 03:17:01,089 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 05:17:19] 2025-06-06 03:17:01,089 | INFO     | **************************************
[2025-06-06 05:17:19] 2025-06-06 03:17:01,089 | INFO     | 
[2025-06-06 05:17:19] 2025-06-06 03:17:01,110 | INFO     | architecture information:
[2025-06-06 05:17:19] 2025-06-06 03:17:01,111 | INFO     | executing command: cat /etc/os-release
[2025-06-06 05:17:19] 2025-06-06 03:17:01,121 | INFO     | cat /etc/os-release:
[2025-06-06 05:17:19] NAME="CentOS Linux"
[2025-06-06 05:17:19] VERSION="7 (Core)"
[2025-06-06 05:17:19] ID="centos"
[2025-06-06 05:17:19] ID_LIKE="rhel fedora"
[2025-06-06 05:17:19] VERSION_ID="7"
[2025-06-06 05:17:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 05:17:19] ANSI_COLOR="0;31"
[2025-06-06 05:17:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 05:17:19] HOME_URL="https://www.centos.org/"
[2025-06-06 05:17:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 05:17:19] 
[2025-06-06 05:17:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 05:17:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 05:17:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 05:17:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 05:17:19] 
[2025-06-06 05:17:19] 2025-06-06 03:17:01,121 | INFO     | **************************************
[2025-06-06 05:17:19] 2025-06-06 03:17:01,622 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-06 05:17:19] 2025-06-06 03:17:01,638 | INFO     | sufficient remaining disk space (36776706048 B)
[2025-06-06 05:17:19] 2025-06-06 03:17:01,639 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 05:17:19] 2025-06-06 03:17:01,639 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 05:17:19] 2025-06-06 03:17:01,639 | INFO     | update_server=False
[2025-06-06 05:17:19] 2025-06-06 03:17:01,639 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 05:17:19] 2025-06-06 03:17:01,639 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:17:19] 2025-06-06 03:17:01,949 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 05:17:19] 2025-06-06 03:17:01,949 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 05:17:19] 2025-06-06 03:17:01,949 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 05:17:19] 2025-06-06 03:17:02,334 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:17:19] 2025-06-06 03:17:02,334 | INFO     | aborting loop
[2025-06-06 05:17:19] 2025-06-06 03:17:02,458 | INFO     | all data control threads have been joined
[2025-06-06 05:17:19] 2025-06-06 03:17:02,645 | INFO     | [job] retrieve thread has finished
[2025-06-06 05:17:19] 2025-06-06 03:17:02,645 | INFO     | [job] queue monitor thread has finished
[2025-06-06 05:17:19] 2025-06-06 03:17:02,929 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 05:17:19] 2025-06-06 03:17:02,973 | INFO     | [payload] failed_post thread has finished
[2025-06-06 05:17:19] 2025-06-06 03:17:02,974 | INFO     | [data] copytool_in thread has finished
[2025-06-06 05:17:19] 2025-06-06 03:17:03,109 | INFO     | all job control threads have been joined
[2025-06-06 05:17:19] 2025-06-06 03:17:03,125 | INFO     | all payload control threads have been joined
[2025-06-06 05:17:19] 2025-06-06 03:17:03,308 | INFO     | [job] validate thread has finished
[2025-06-06 05:17:19] 2025-06-06 03:17:03,337 | INFO     | [job] job monitor thread has finished
[2025-06-06 05:17:19] 2025-06-06 03:17:03,464 | INFO     | [data] control thread has finished
[2025-06-06 05:17:19] 2025-06-06 03:17:03,680 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 05:17:19] 2025-06-06 03:17:03,765 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 05:17:19] 2025-06-06 03:17:03,853 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 05:17:19] 2025-06-06 03:17:03,857 | INFO     | [payload] validate_post thread has finished
[2025-06-06 05:17:19] 2025-06-06 03:17:04,111 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 05:17:19] 2025-06-06 03:17:04,113 | INFO     | [job] control thread has finished
[2025-06-06 05:17:19] 2025-06-06 03:17:04,131 | INFO     | [payload] control thread has finished
[2025-06-06 05:17:19] 2025-06-06 03:17:04,933 | INFO     | [data] copytool_out thread has finished
[2025-06-06 05:17:19] 2025-06-06 03:17:07,769 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 05:17:19] 2025-06-06 03:17:11,737 | INFO     | job.realtimelogging is not enabled
[2025-06-06 05:17:19] 2025-06-06 03:17:12,741 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 05:17:19] 2025-06-06 03:17:14,627 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139631663224640)>', '<ExcThread(monitor, started 139631223875328)>']
[2025-06-06 05:17:19] 2025-06-06 03:17:15,001 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 05:17:19] 2025-06-06 03:17:15,001 | INFO     | [monitor] control thread has ended
[2025-06-06 05:17:19] 2025-06-06 03:17:19,637 | INFO     | all workflow threads have been joined
[2025-06-06 05:17:19] 2025-06-06 03:17:19,638 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 05:17:19] 2025-06-06 03:17:19,638 | INFO     | traces error code: 0
[2025-06-06 05:17:19] 2025-06-06 03:17:19,638 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 05:17:19] 2025-06-06 03:17:19,727 [wrapper] ==== pilot stdout END ====
[2025-06-06 05:17:19] 2025-06-06 03:17:19,729 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 05:17:19] 2025-06-06 03:17:19,731 [wrapper] pilotpid: 1969904
[2025-06-06 05:17:19] 2025-06-06 03:17:19,734 [wrapper] Pilot exit status: 0
[2025-06-06 05:17:19] 2025-06-06 03:17:19,742 [wrapper] pandaids: 6678866545
[2025-06-06 05:17:19] 2025-06-06 03:17:19,770 [wrapper] cleanup supervisor_pilot 1988517 1969905
[2025-06-06 05:17:19] 2025-06-06 03:17:19,772 [wrapper] Test setup, not cleaning
[2025-06-06 05:17:19] 2025-06-06 03:17:19,774 [wrapper] apfmon messages muted
[2025-06-06 05:17:19] 2025-06-06 03:17:19,777 [wrapper] ==== wrapper stdout END ====
[2025-06-06 05:17:19] 2025-06-06 03:17:19,779 [wrapper] ==== wrapper stderr END ====
[2025-06-06 05:17:19]  *** Error codes and diagnostics ***
[2025-06-06 05:17:19]     "exeErrorCode": 0,
[2025-06-06 05:17:19]     "exeErrorDiag": "",
[2025-06-06 05:17:19]     "pilotErrorCode": 0,
[2025-06-06 05:17:19]     "pilotErrorDiag": "",
[2025-06-06 05:17:19]  *** Listing of results directory ***
[2025-06-06 05:17:19] total 385116
[2025-06-06 05:17:19] -rw-r--r-- 1 boinc boinc    495897 Jun  4 10:17 pilot3.tar.gz
[2025-06-06 05:17:19] -rw-r--r-- 1 boinc boinc      5111 Jun  4 10:26 queuedata.json
[2025-06-06 05:17:19] -rwx------ 1 boinc boinc     37140 Jun  4 10:27 runpilot2-wrapper.sh
[2025-06-06 05:17:19] -rw-r--r-- 1 boinc boinc       100 Jun  6 03:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 05:17:19] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 03:44 run_atlas
[2025-06-06 05:17:19] -rw-r--r-- 1 boinc boinc       105 Jun  6 03:44 job.xml
[2025-06-06 05:17:19] -rw-r--r-- 1 boinc boinc      6048 Jun  6 03:44 init_data.xml
[2025-06-06 05:17:19] -rw-r--r-- 2 boinc boinc 214961979 Jun  6 03:44 EVNT.45006593._001105.pool.root.1
[2025-06-06 05:17:19] -rw-r--r-- 2 boinc boinc     15093 Jun  6 03:44 start_atlas.sh
[2025-06-06 05:17:19] drwxrwx--x 2 boinc boinc      4096 Jun  6 03:44 shared
[2025-06-06 05:17:19] -rw-r--r-- 2 boinc boinc    508878 Jun  6 03:44 input.tar.gz
[2025-06-06 05:17:19] -rw-r--r-- 1 boinc boinc         0 Jun  6 03:44 boinc_lockfile
[2025-06-06 05:17:19] -rw-r--r-- 1 boinc boinc      2523 Jun  6 03:44 pandaJob.out
[2025-06-06 05:17:19] -rw------- 1 boinc boinc    987721 Jun  6 03:44 agis_schedconf.cvmfs.json
[2025-06-06 05:17:19] -rw------- 1 boinc boinc   1598969 Jun  6 03:44 agis_ddmendpoints.agis.ALL.json
[2025-06-06 05:17:19] drwx------ 4 boinc boinc      4096 Jun  6 03:44 pilot3
[2025-06-06 05:17:19] -rw------- 1 boinc boinc 173799890 Jun  6 05:13 HITS.45006595._055655.pool.root.1
[2025-06-06 05:17:19] -rw-r--r-- 1 boinc boinc       529 Jun  6 05:13 boinc_task_state.xml
[2025-06-06 05:17:19] -rw------- 1 boinc boinc      1069 Jun  6 05:15 memory_monitor_summary.json
[2025-06-06 05:17:19] -rw------- 1 boinc boinc    359417 Jun  6 05:15 log.45006595._055655.job.log.tgz.1
[2025-06-06 05:17:19] -rw------- 1 boinc boinc      7742 Jun  6 05:16 heartbeat.json
[2025-06-06 05:17:19] -rw------- 1 boinc boinc        95 Jun  6 05:16 pilot_heartbeat.json
[2025-06-06 05:17:19] -rw-r--r-- 1 boinc boinc      8192 Jun  6 05:17 boinc_mmap_file
[2025-06-06 05:17:19] -rw-r--r-- 1 boinc boinc        27 Jun  6 05:17 wrapper_checkpoint.txt
[2025-06-06 05:17:19] -rw------- 1 boinc boinc      4432 Jun  6 05:17 pilotlog.txt
[2025-06-06 05:17:19] -rw------- 1 boinc boinc    521863 Jun  6 05:17 log.45006595._055655.job.log.1
[2025-06-06 05:17:19] -rw------- 1 boinc boinc       357 Jun  6 05:17 output.list
[2025-06-06 05:17:19] -rw-r--r-- 1 boinc boinc       620 Jun  6 05:17 runtime_log
[2025-06-06 05:17:19] -rw------- 1 boinc boinc    901120 Jun  6 05:17 result.tar.gz
[2025-06-06 05:17:19] -rw-r--r-- 1 boinc boinc      8716 Jun  6 05:17 runtime_log.err
[2025-06-06 05:17:19] -rw------- 1 boinc boinc       654 Jun  6 05:17 1yoKDmtdyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmemnKDm4tsiHm.diag
[2025-06-06 05:17:19] -rw-r--r-- 1 boinc boinc     22200 Jun  6 05:17 stderr.txt
[2025-06-06 05:17:19] HITS file was successfully produced:
[2025-06-06 05:17:19] -rw------- 1 boinc boinc 173799890 Jun  6 05:13 shared/HITS.pool.root.1
[2025-06-06 05:17:19]  *** Contents of shared directory: ***
[2025-06-06 05:17:19] total 381056
[2025-06-06 05:17:19] -rw-r--r-- 2 boinc boinc 214961979 Jun  6 03:44 ATLAS.root_0
[2025-06-06 05:17:19] -rw-r--r-- 2 boinc boinc     15093 Jun  6 03:44 start_atlas.sh
[2025-06-06 05:17:19] -rw-r--r-- 2 boinc boinc    508878 Jun  6 03:44 input.tar.gz
[2025-06-06 05:17:19] -rw------- 1 boinc boinc 173799890 Jun  6 05:13 HITS.pool.root.1
[2025-06-06 05:17:19] -rw------- 1 boinc boinc    901120 Jun  6 05:17 result.tar.gz
05:17:21 (1966189): run_atlas exited; CPU time 56908.645129
05:17:21 (1966189): called boinc_finish(0)

</stderr_txt>
]]>

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