Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:05:05 (1029622): wrapper (7.7.26015): starting
09:05:05 (1029622): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:05:05] Arguments: --nthreads 8
[2025-06-04 09:05:05] Threads: 8
[2025-06-04 09:05:05] Checking for CVMFS
[2025-06-04 09:05:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:05:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:05:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:05:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:05:06] 2.12.6.0 267692 24508 139748 146780 3 630 24094730 40960000 27107 16776704 1 315130087 99.790 173108847 36871 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 09:05:06] CVMFS is ok
[2025-06-04 09:05:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:05:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:05:06] Further information can be found at the LHC@home message board.
[2025-06-04 09:05:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:05:06] Checking for apptainer binary...
[2025-06-04 09:05:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:05:06] Running /usr/bin/apptainer --version
[2025-06-04 09:05:06] apptainer version 1.4.1-1.el9
[2025-06-04 09:05:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:05:06] c8-16-1.aglt2.org
[2025-06-04 09:05:06] apptainer works
[2025-06-04 09:05:06] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:05:06] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:05:06] Starting ATLAS job with PandaID=6679230559
[2025-06-04 09:05:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:56:18]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:56:18]  is_altstaged=None
[2025-06-04 09:56:18]  is_tar=False
[2025-06-04 09:56:18]  lfn=log.45006595._056023.job.log.tgz.1
[2025-06-04 09:56:18]  mtime=0
[2025-06-04 09:56:18]  protocol_id=None
[2025-06-04 09:56:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:56:18]  replicas=None
[2025-06-04 09:56:18]  scope=mc23_13p6TeV
[2025-06-04 09:56:18]  status=None
[2025-06-04 09:56:18]  status_code=0
[2025-06-04 09:56:18]  storage_token=
[2025-06-04 09:56:18]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6679230559/log.45006595._056023.job.log.tgz.1
[2025-06-04 09:56:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/19/04/log.45006595._056023.job.log.tgz.1
[2025-06-04 09:56:18]  workdir=None
[2025-06-04 09:56:18] ]
[2025-06-04 09:56:18] 2025-06-04 13:55:38,092 | INFO     | transferring file log.45006595._056023.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6679230559/log.45006595._056023.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:56:18] 2025-06-04 13:55:38,092 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6679230559/log.45006595._056023.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._056023.job
[2025-06-04 09:56:18] 2025-06-04 13:55:38,111 | INFO     | adding to output.list: log.45006595._056023.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/19/04/log.45006595._056023.job.log.tg
[2025-06-04 09:56:18] 2025-06-04 13:55:38,112 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:56:18] 2025-06-04 13:55:38,112 | INFO     | summary of transferred files:
[2025-06-04 09:56:18] 2025-06-04 13:55:38,112 | INFO     |  -- lfn=log.45006595._056023.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:56:18] 2025-06-04 13:55:38,112 | INFO     | stage-out finished correctly
[2025-06-04 09:56:18] 2025-06-04 13:55:39,396 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:56:18] 2025-06-04 13:55:42,206 | INFO     | job 6679230559 has state=finished
[2025-06-04 09:56:18] 2025-06-04 13:55:42,206 | INFO     | preparing for final server update for job 6679230559 in state='finished'
[2025-06-04 09:56:18] 2025-06-04 13:55:42,206 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:56:18] 2025-06-04 13:55:42,206 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:56:18] 2025-06-04 13:55:42,206 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:56:18] 2025-06-04 13:55:42,206 | INFO     | job 6679230559 has finished - writing final server update
[2025-06-04 09:56:18] 2025-06-04 13:55:42,207 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:56:18] 2025-06-04 13:55:42,207 | INFO     | executing command: lscpu
[2025-06-04 09:56:18] 2025-06-04 13:55:42,271 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:56:18] 2025-06-04 13:55:44,201 | WARNING  | process 1082755 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 09:56:18] 2025-06-04 13:55:44,202 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6679230559/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:56:18] 2025-06-04 13:55:44,559 | INFO     | number of running child processes to parent process 1082755: 1
[2025-06-04 09:56:18] 2025-06-04 13:55:44,559 | INFO     | maximum number of monitored processes: 6
[2025-06-04 09:56:18] 2025-06-04 13:55:45,809 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:56:18] 2025-06-04 13:55:45,827 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3598.1970468749987
[2025-06-04 09:56:18] 2025-06-04 13:55:45,839 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6679230559/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:56:18] 2025-06-04 13:55:45,840 | INFO     | extracted standard info from prmon json
[2025-06-04 09:56:18] 2025-06-04 13:55:45,840 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:56:18] 2025-06-04 13:55:45,840 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:56:18] 2025-06-04 13:55:45,840 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:56:18] 2025-06-04 13:55:45,840 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:56:18] 2025-06-04 13:55:45,841 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:56:18] 2025-06-04 13:55:45,841 | INFO     | sum of square deviations: 24640462.0
[2025-06-04 09:56:18] 2025-06-04 13:55:45,841 | INFO     | sum of deviations: 4868860546.0
[2025-06-04 09:56:18] 2025-06-04 13:55:45,841 | INFO     | mean x: 1749043927.0
[2025-06-04 09:56:18] 2025-06-04 13:55:45,841 | INFO     | mean y: 2402841.581395349
[2025-06-04 09:56:18] 2025-06-04 13:55:45,841 | INFO     | -- intersect: -345601951873.48865
[2025-06-04 09:56:18] 2025-06-04 13:55:45,841 | INFO     | intersect: -345601951873.48865
[2025-06-04 09:56:18] 2025-06-04 13:55:45,841 | INFO     | chi2: 0.6792797856941637
[2025-06-04 09:56:18] 2025-06-04 13:55:45,841 | INFO     | -- intersect: -345601951873.48865
[2025-06-04 09:56:18] 2025-06-04 13:55:45,841 | INFO     | current memory leak: 197.60 B/s (using 43 data points, chi2=0.68)
[2025-06-04 09:56:18] 2025-06-04 13:55:45,842 | INFO     | could have reported an average CPU frequency of 3672 MHz (5 samples)
[2025-06-04 09:56:18] 2025-06-04 13:55:45,842 | INFO     | ..............................
[2025-06-04 09:56:18] 2025-06-04 13:55:45,842 | INFO     | . Timing measurements:
[2025-06-04 09:56:18] 2025-06-04 13:55:45,842 | INFO     | . get job = 0 s
[2025-06-04 09:56:18] 2025-06-04 13:55:45,842 | INFO     | . initial setup = 2 s
[2025-06-04 09:56:18] 2025-06-04 13:55:45,842 | INFO     | . payload setup = 5 s
[2025-06-04 09:56:18] 2025-06-04 13:55:45,842 | INFO     | . stage-in = 0 s
[2025-06-04 09:56:18] 2025-06-04 13:55:45,842 | INFO     | . payload execution = 2997 s
[2025-06-04 09:56:18] 2025-06-04 13:55:45,842 | INFO     | . stage-out = 0 s
[2025-06-04 09:56:18] 2025-06-04 13:55:45,842 | INFO     | . log creation = 0 s
[2025-06-04 09:56:18] 2025-06-04 13:55:45,842 | INFO     | ..............................
[2025-06-04 09:56:18] 2025-06-04 13:55:46,154 | INFO     | 
[2025-06-04 09:56:18] 2025-06-04 13:55:46,154 | INFO     | job summary report
[2025-06-04 09:56:18] 2025-06-04 13:55:46,154 | INFO     | --------------------------------------------------
[2025-06-04 09:56:18] 2025-06-04 13:55:46,154 | INFO     | PanDA job id: 6679230559
[2025-06-04 09:56:18] 2025-06-04 13:55:46,154 | INFO     | task id: 45006595
[2025-06-04 09:56:18] 2025-06-04 13:55:46,154 | INFO     | errors: (none)
[2025-06-04 09:56:18] 2025-06-04 13:55:46,154 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:56:18] 2025-06-04 13:55:46,154 | INFO     | pilot state: finished 
[2025-06-04 09:56:18] 2025-06-04 13:55:46,154 | INFO     | transexitcode: 0
[2025-06-04 09:56:18] 2025-06-04 13:55:46,154 | INFO     | exeerrorcode: 0
[2025-06-04 09:56:18] 2025-06-04 13:55:46,154 | INFO     | exeerrordiag: 
[2025-06-04 09:56:18] 2025-06-04 13:55:46,154 | INFO     | exitcode: 0
[2025-06-04 09:56:18] 2025-06-04 13:55:46,154 | INFO     | exitmsg: OK
[2025-06-04 09:56:18] 2025-06-04 13:55:46,154 | INFO     | cpuconsumptiontime: 19360 s
[2025-06-04 09:56:18] 2025-06-04 13:55:46,154 | INFO     | nevents: 400
[2025-06-04 09:56:18] 2025-06-04 13:55:46,154 | INFO     | neventsw: 0
[2025-06-04 09:56:18] 2025-06-04 13:55:46,154 | INFO     | pid: 1082755
[2025-06-04 09:56:18] 2025-06-04 13:55:46,155 | INFO     | pgrp: 1082755
[2025-06-04 09:56:18] 2025-06-04 13:55:46,155 | INFO     | corecount: 8
[2025-06-04 09:56:18] 2025-06-04 13:55:46,155 | INFO     | event service: False
[2025-06-04 09:56:18] 2025-06-04 13:55:46,155 | INFO     | sizes: {0: 2397633, 4: 2397895, 11: 2397923, 3006: 2423385, 3007: 2432381, 3009: 2432381, 3015: 2432735}
[2025-06-04 09:56:18] 2025-06-04 13:55:46,155 | INFO     | --------------------------------------------------
[2025-06-04 09:56:18] 2025-06-04 13:55:46,155 | INFO     | 
[2025-06-04 09:56:18] 2025-06-04 13:55:46,155 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 09:56:18] 2025-06-04 13:55:46,184 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:56:18] 2025-06-04 13:55:46,184 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:56:18] 2025-06-04 13:55:46,184 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:56:18] 2025-06-04 13:55:46,184 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:56:18] 2025-06-04 13:55:46,184 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:56:18] 2025-06-04 13:55:46,184 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:56:18] 2025-06-04 13:55:46,184 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:56:18] 2025-06-04 13:55:46,185 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:56:18] 2025-06-04 13:55:46,185 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:56:18] 2025-06-04 13:55:46,185 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:56:18] 2025-06-04 13:55:46,185 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:56:18] 2025-06-04 13:55:46,185 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:56:18] 2025-06-04 13:55:46,185 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:56:18] 2025-06-04 13:55:46,185 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:56:18] 2025-06-04 13:55:46,185 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:56:18] 2025-06-04 13:55:46,185 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:56:18] 2025-06-04 13:55:46,185 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:56:18] 2025-06-04 13:55:46,185 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:56:18] 2025-06-04 13:55:46,185 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:56:18] 2025-06-04 13:55:46,185 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:56:18] 2025-06-04 13:55:46,185 | INFO     | job 6679230559 has completed (purged errors)
[2025-06-04 09:56:18] 2025-06-04 13:55:46,185 | INFO     | overall cleanup function is called
[2025-06-04 09:56:18] 2025-06-04 13:55:47,188 | INFO     | --- collectZombieJob: --- 10, [1082755]
[2025-06-04 09:56:18] 2025-06-04 13:55:47,188 | INFO     | zombie collector waiting for pid 1082755
[2025-06-04 09:56:18] 2025-06-04 13:55:47,188 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:56:18] 2025-06-04 13:55:47,189 | INFO     | collected zombie processes
[2025-06-04 09:56:18] 2025-06-04 13:55:47,189 | INFO     | will attempt to kill all subprocesses of pid=1082755
[2025-06-04 09:56:18] 2025-06-04 13:55:47,579 | INFO     | process IDs to be killed: [1082755] (in reverse order)
[2025-06-04 09:56:18] 2025-06-04 13:55:47,734 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:56:18] 2025-06-04 13:55:47,734 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:56:18] 2025-06-04 13:55:47,756 | INFO     | did not find any defunct processes belonging to 1082755
[2025-06-04 09:56:18] 2025-06-04 13:55:47,773 | INFO     | did not find any defunct processes belonging to 1082755
[2025-06-04 09:56:18] 2025-06-04 13:55:47,773 | INFO     | ready for new job
[2025-06-04 09:56:18] 2025-06-04 13:55:47,773 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:56:18] 2025-06-04 13:55:47,774 | INFO     | ***************************************
[2025-06-04 09:56:18] 2025-06-04 13:55:47,775 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-04 09:56:18] 2025-06-04 13:55:47,775 | INFO     | ***************************************
[2025-06-04 09:56:18] 2025-06-04 13:55:47,775 | INFO     | 
[2025-06-04 09:56:18] 2025-06-04 13:55:47,792 | INFO     | architecture information:
[2025-06-04 09:56:18] 2025-06-04 13:55:47,792 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:56:18] 2025-06-04 13:55:47,808 | INFO     | cat /etc/os-release:
[2025-06-04 09:56:18] NAME="CentOS Linux"
[2025-06-04 09:56:18] VERSION="7 (Core)"
[2025-06-04 09:56:18] ID="centos"
[2025-06-04 09:56:18] ID_LIKE="rhel fedora"
[2025-06-04 09:56:18] VERSION_ID="7"
[2025-06-04 09:56:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:56:18] ANSI_COLOR="0;31"
[2025-06-04 09:56:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:56:18] HOME_URL="https://www.centos.org/"
[2025-06-04 09:56:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:56:18] 
[2025-06-04 09:56:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:56:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:56:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:56:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:56:18] 
[2025-06-04 09:56:18] 2025-06-04 13:55:47,808 | INFO     | ***************************************
[2025-06-04 09:56:18] 2025-06-04 13:55:48,311 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 09:56:18] 2025-06-04 13:55:48,327 | INFO     | sufficient remaining disk space (171904598016 B)
[2025-06-04 09:56:18] 2025-06-04 13:55:48,327 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:56:18] 2025-06-04 13:55:48,327 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:56:18] 2025-06-04 13:55:48,327 | INFO     | update_server=False
[2025-06-04 09:56:18] 2025-06-04 13:55:48,327 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:56:18] 2025-06-04 13:55:48,328 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:56:18] 2025-06-04 13:55:48,328 | INFO     | aborting loop
[2025-06-04 09:56:18] 2025-06-04 13:55:48,358 | INFO     | all data control threads have been joined
[2025-06-04 09:56:18] 2025-06-04 13:55:48,493 | INFO     | all payload control threads have been joined
[2025-06-04 09:56:18] 2025-06-04 13:55:48,685 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:56:18] 2025-06-04 13:55:49,197 | INFO     | all job control threads have been joined
[2025-06-04 09:56:18] 2025-06-04 13:55:49,328 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:56:18] 2025-06-04 13:55:49,333 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:56:18] 2025-06-04 13:55:49,364 | INFO     | [data] control thread has finished
[2025-06-04 09:56:18] 2025-06-04 13:55:49,499 | INFO     | [payload] control thread has finished
[2025-06-04 09:56:18] 2025-06-04 13:55:49,769 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:56:18] 2025-06-04 13:55:49,956 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:56:18] 2025-06-04 13:55:50,073 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:56:18] 2025-06-04 13:55:50,160 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:56:18] 2025-06-04 13:55:50,203 | INFO     | [job] control thread has finished
[2025-06-04 09:56:18] 2025-06-04 13:55:50,236 | INFO     | [job] validate thread has finished
[2025-06-04 09:56:18] 2025-06-04 13:55:50,430 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:56:18] 2025-06-04 13:55:50,565 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:56:18] 2025-06-04 13:55:50,691 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:56:18] 2025-06-04 13:55:50,894 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:56:18] 2025-06-04 13:55:50,903 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:56:18] 2025-06-04 13:55:51,909 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:56:18] 2025-06-04 13:55:53,960 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:56:18] 2025-06-04 13:55:58,574 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:56:18] 2025-06-04 13:55:59,579 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:56:18] 2025-06-04 13:56:01,655 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140550676891456)>', '<ExcThread(monitor, started 140549893900032)>']
[2025-06-04 09:56:18] 2025-06-04 13:56:06,680 | INFO     | all workflow threads have been joined
[2025-06-04 09:56:18] 2025-06-04 13:56:06,681 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:56:18] 2025-06-04 13:56:06,681 | INFO     | traces error code: 0
[2025-06-04 09:56:18] 2025-06-04 13:56:06,681 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:56:18] 2025-06-04 13:56:18,022 | INFO     | PID=1036615 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 09:56:18] 2025-06-04 13:56:18,023 | INFO     | .. there are 37 such processes running
[2025-06-04 09:56:18] 2025-06-04 13:56:18,024 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:56:18] 2025-06-04 13:56:18,024 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:56:18] 2025-06-04 13:56:18,024 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:56:18] 2025-06-04 13:56:18,024 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:56:18] 2025-06-04 13:56:18,024 | INFO     | [monitor] control thread has ended
[2025-06-04 09:56:18] 2025-06-04 13:56:18,135 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:56:18] 2025-06-04 13:56:18,138 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:56:18] 2025-06-04 13:56:18,140 [wrapper] pilotpid: 1036615
[2025-06-04 09:56:18] 2025-06-04 13:56:18,142 [wrapper] Pilot exit status: 0
[2025-06-04 09:56:18] 2025-06-04 13:56:18,151 [wrapper] pandaids: 6679230559
[2025-06-04 09:56:18] 2025-06-04 13:56:18,261 [wrapper] cleanup supervisor_pilot 1564535 1036616
[2025-06-04 09:56:18] 2025-06-04 13:56:18,263 [wrapper] Test setup, not cleaning
[2025-06-04 09:56:18] 2025-06-04 13:56:18,266 [wrapper] apfmon messages muted
[2025-06-04 09:56:18] 2025-06-04 13:56:18,268 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:56:18] 2025-06-04 13:56:18,270 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:56:18]  *** Error codes and diagnostics ***
[2025-06-04 09:56:18]     "exeErrorCode": 0,
[2025-06-04 09:56:18]     "exeErrorDiag": "",
[2025-06-04 09:56:18]     "pilotErrorCode": 0,
[2025-06-04 09:56:18]     "pilotErrorDiag": "",
[2025-06-04 09:56:18]  *** Listing of results directory ***
[2025-06-04 09:56:18] total 392224
[2025-06-04 09:56:18] -rw-r--r--. 1 boincer umatlas    549845 Jun  2 05:40 pilot3.tar.gz
[2025-06-04 09:56:18] -rwx------. 1 boincer umatlas     37140 Jun  4 04:54 runpilot2-wrapper.sh
[2025-06-04 09:56:18] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:54 queuedata.json
[2025-06-04 09:56:18] -rw-r--r--. 1 boincer umatlas       100 Jun  4 09:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:56:18] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 09:05 run_atlas
[2025-06-04 09:56:18] -rw-r--r--. 1 boincer umatlas       105 Jun  4 09:05 job.xml
[2025-06-04 09:56:18] -rw-r--r--. 2 boincer umatlas 218750407 Jun  4 09:05 EVNT.45006593._001058.pool.root.1
[2025-06-04 09:56:18] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:05 start_atlas.sh
[2025-06-04 09:56:18] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 09:05 shared
[2025-06-04 09:56:18] -rw-r--r--. 2 boincer umatlas    564119 Jun  4 09:05 input.tar.gz
[2025-06-04 09:56:18] -rw-r--r--. 1 boincer umatlas         0 Jun  4 09:05 boinc_lockfile
[2025-06-04 09:56:18] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 09:05 pandaJob.out
[2025-06-04 09:56:18] -rw-------. 1 boincer umatlas    986811 Jun  4 09:05 agis_schedconf.cvmfs.json
[2025-06-04 09:56:18] -rw-------. 1 boincer umatlas   1598969 Jun  4 09:05 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:56:18] drwx------. 6 boincer umatlas      4096 Jun  4 09:05 pilot3
[2025-06-04 09:56:18] -rw-r--r--. 1 boincer umatlas      7161 Jun  4 09:47 init_data.xml
[2025-06-04 09:56:18] -rw-------. 1 boincer umatlas 177739291 Jun  4 09:55 HITS.45006595._056023.pool.root.1
[2025-06-04 09:56:18] -rw-r--r--. 1 boincer umatlas       529 Jun  4 09:55 boinc_task_state.xml
[2025-06-04 09:56:18] -rw-------. 1 boincer umatlas      1053 Jun  4 09:55 memory_monitor_summary.json
[2025-06-04 09:56:18] -rw-------. 1 boincer umatlas    282487 Jun  4 09:55 log.45006595._056023.job.log.tgz.1
[2025-06-04 09:56:18] -rw-------. 1 boincer umatlas      7720 Jun  4 09:55 heartbeat.json
[2025-06-04 09:56:18] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:56 boinc_mmap_file
[2025-06-04 09:56:18] -rw-r--r--. 1 boincer umatlas        27 Jun  4 09:56 wrapper_checkpoint.txt
[2025-06-04 09:56:18] -rw-------. 1 boincer umatlas       823 Jun  4 09:56 pilotlog.txt
[2025-06-04 09:56:18] -rw-------. 1 boincer umatlas        95 Jun  4 09:56 pilot_heartbeat.json
[2025-06-04 09:56:18] -rw-------. 1 boincer umatlas    325224 Jun  4 09:56 log.45006595._056023.job.log.1
[2025-06-04 09:56:18] -rw-------. 1 boincer umatlas       357 Jun  4 09:56 output.list
[2025-06-04 09:56:18] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:56 runtime_log
[2025-06-04 09:56:18] -rw-------. 1 boincer umatlas    624640 Jun  4 09:56 result.tar.gz
[2025-06-04 09:56:18] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 09:56 runtime_log.err
[2025-06-04 09:56:18] -rw-------. 1 boincer umatlas       654 Jun  4 09:56 dHMLDm73yg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmvzaKDmKkgtLo.diag
[2025-06-04 09:56:18] -rw-r--r--. 1 boincer umatlas     21484 Jun  4 09:56 stderr.txt
[2025-06-04 09:56:18] HITS file was successfully produced:
[2025-06-04 09:56:18] -rw-------. 1 boincer umatlas 177739291 Jun  4 09:55 shared/HITS.pool.root.1
[2025-06-04 09:56:18]  *** Contents of shared directory: ***
[2025-06-04 09:56:18] total 388388
[2025-06-04 09:56:18] -rw-r--r--. 2 boincer umatlas 218750407 Jun  4 09:05 ATLAS.root_0
[2025-06-04 09:56:18] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:05 start_atlas.sh
[2025-06-04 09:56:18] -rw-r--r--. 2 boincer umatlas    564119 Jun  4 09:05 input.tar.gz
[2025-06-04 09:56:18] -rw-------. 1 boincer umatlas 177739291 Jun  4 09:55 HITS.pool.root.1
[2025-06-04 09:56:18] -rw-------. 1 boincer umatlas    624640 Jun  4 09:56 result.tar.gz
09:56:19 (1029622): run_atlas exited; CPU time 19437.092430
09:56:19 (1029622): called boinc_finish(0)

</stderr_txt>
]]>

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