Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:52:32 (472965): wrapper (7.7.26015): starting
08:52:32 (472965): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:52:32] Arguments: --nthreads 8
[2025-06-04 08:52:32] Threads: 8
[2025-06-04 08:52:32] Checking for CVMFS
[2025-06-04 08:52:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:52:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:52:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:52:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:52:33] 2.12.6.0 5013 37336 651780 146780 1 271 31890709 32935937 11390 16776704 1 532840978 99.688 415284191 36145 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:52:33] CVMFS is ok
[2025-06-04 08:52:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:52:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:52:33] Further information can be found at the LHC@home message board.
[2025-06-04 08:52:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:52:33] Checking for apptainer binary...
[2025-06-04 08:52:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:52:33] Running /usr/bin/apptainer --version
[2025-06-04 08:52:33] apptainer version 1.4.1-1.el9
[2025-06-04 08:52:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:52:33] c7-9-15.aglt2.org
[2025-06-04 08:52:33] apptainer works
[2025-06-04 08:52:33] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:52:33] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:52:33] Starting ATLAS job with PandaID=6679200608
[2025-06-04 08:52:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:30:16]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:30:16]  filetype=log
[2025-06-04 09:30:16]  guid=47e8d658-6988-4f1e-b74b-c682d6017149
[2025-06-04 09:30:16]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 09:30:16]  is_altstaged=None
[2025-06-04 09:30:16]  is_tar=False
[2025-06-04 09:30:16]  lfn=log.45006595._055993.job.log.tgz.1
[2025-06-04 09:30:16]  mtime=0
[2025-06-04 09:30:16]  protocol_id=None
[2025-06-04 09:30:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:30:16]  replicas=None
[2025-06-04 09:30:16]  scope=mc23_13p6TeV
[2025-06-04 09:30:16]  status=None
[2025-06-04 09:30:16]  status_code=0
[2025-06-04 09:30:16]  storage_token=
[2025-06-04 09:30:16]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6679200608/log.45006595._055993.job.log.tgz.1
[2025-06-04 09:30:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d9/1d/log.45006595._055993.job.log.tgz.1
[2025-06-04 09:30:16]  workdir=None
[2025-06-04 09:30:16] ]
[2025-06-04 09:30:16] 2025-06-04 13:29:56,850 | INFO     | transferring file log.45006595._055993.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6679200608/log.45006595._055993.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:30:16] 2025-06-04 13:29:56,850 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6679200608/log.45006595._055993.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._055993.job
[2025-06-04 09:30:16] 2025-06-04 13:29:56,865 | INFO     | adding to output.list: log.45006595._055993.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d9/1d/log.45006595._055993.job.log.tg
[2025-06-04 09:30:16] 2025-06-04 13:29:56,866 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:30:16] 2025-06-04 13:29:56,866 | INFO     | summary of transferred files:
[2025-06-04 09:30:16] 2025-06-04 13:29:56,866 | INFO     |  -- lfn=log.45006595._055993.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:30:16] 2025-06-04 13:29:56,866 | INFO     | stage-out finished correctly
[2025-06-04 09:30:16] 2025-06-04 13:29:57,156 | INFO     | PID=481755 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 09:30:16] 2025-06-04 13:29:57,156 | INFO     | .. there are 20 such processes running
[2025-06-04 09:30:16] 2025-06-04 13:30:00,112 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:30:16] 2025-06-04 13:30:01,356 | INFO     | job 6679200608 has state=finished
[2025-06-04 09:30:16] 2025-06-04 13:30:01,356 | INFO     | preparing for final server update for job 6679200608 in state='finished'
[2025-06-04 09:30:16] 2025-06-04 13:30:01,356 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:30:16] 2025-06-04 13:30:01,356 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:30:16] 2025-06-04 13:30:01,357 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:30:16] 2025-06-04 13:30:01,357 | INFO     | job 6679200608 has finished - writing final server update
[2025-06-04 09:30:16] 2025-06-04 13:30:01,357 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:30:16] 2025-06-04 13:30:01,373 | INFO     | executing command: lscpu
[2025-06-04 09:30:16] 2025-06-04 13:30:01,444 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:30:16] 2025-06-04 13:30:02,606 | WARNING  | process 491568 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 09:30:16] 2025-06-04 13:30:02,607 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6679200608/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:30:16] 2025-06-04 13:30:02,801 | INFO     | number of running child processes to parent process 491568: 1
[2025-06-04 09:30:16] 2025-06-04 13:30:02,801 | INFO     | maximum number of monitored processes: 6
[2025-06-04 09:30:16] 2025-06-04 13:30:04,352 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:30:16] 2025-06-04 13:30:04,352 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6679200608/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:30:16] 2025-06-04 13:30:04,353 | INFO     | extracted standard info from prmon json
[2025-06-04 09:30:16] 2025-06-04 13:30:04,353 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:30:16] 2025-06-04 13:30:04,353 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:30:16] 2025-06-04 13:30:04,353 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:30:16] 2025-06-04 13:30:04,353 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:30:16] 2025-06-04 13:30:04,354 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:30:16] 2025-06-04 13:30:04,354 | INFO     | sum of square deviations: 8362947.5
[2025-06-04 09:30:16] 2025-06-04 13:30:04,354 | INFO     | sum of deviations: 2653055157.5
[2025-06-04 09:30:16] 2025-06-04 13:30:04,354 | INFO     | mean x: 1749042769.5
[2025-06-04 09:30:16] 2025-06-04 13:30:04,354 | INFO     | mean y: 2152479.7
[2025-06-04 09:30:16] 2025-06-04 13:30:04,354 | INFO     | -- intersect: -554862856574.83
[2025-06-04 09:30:16] 2025-06-04 13:30:04,354 | INFO     | intersect: -554862856574.83
[2025-06-04 09:30:16] 2025-06-04 13:30:04,354 | INFO     | chi2: 0.6623723897696894
[2025-06-04 09:30:16] 2025-06-04 13:30:04,354 | INFO     | -- intersect: -554862856574.83
[2025-06-04 09:30:16] 2025-06-04 13:30:04,354 | INFO     | current memory leak: 317.24 B/s (using 30 data points, chi2=0.66)
[2025-06-04 09:30:16] 2025-06-04 13:30:04,354 | INFO     | ..............................
[2025-06-04 09:30:16] 2025-06-04 13:30:04,354 | INFO     | . Timing measurements:
[2025-06-04 09:30:16] 2025-06-04 13:30:04,354 | INFO     | . get job = 0 s
[2025-06-04 09:30:16] 2025-06-04 13:30:04,354 | INFO     | . initial setup = 2 s
[2025-06-04 09:30:16] 2025-06-04 13:30:04,354 | INFO     | . payload setup = 3 s
[2025-06-04 09:30:16] 2025-06-04 13:30:04,354 | INFO     | . stage-in = 0 s
[2025-06-04 09:30:16] 2025-06-04 13:30:04,355 | INFO     | . payload execution = 2216 s
[2025-06-04 09:30:16] 2025-06-04 13:30:04,355 | INFO     | . stage-out = 0 s
[2025-06-04 09:30:16] 2025-06-04 13:30:04,355 | INFO     | . log creation = 0 s
[2025-06-04 09:30:16] 2025-06-04 13:30:04,355 | INFO     | ..............................
[2025-06-04 09:30:16] 2025-06-04 13:30:04,390 | INFO     | 
[2025-06-04 09:30:16] 2025-06-04 13:30:04,390 | INFO     | job summary report
[2025-06-04 09:30:16] 2025-06-04 13:30:04,390 | INFO     | --------------------------------------------------
[2025-06-04 09:30:16] 2025-06-04 13:30:04,391 | INFO     | PanDA job id: 6679200608
[2025-06-04 09:30:16] 2025-06-04 13:30:04,391 | INFO     | task id: 45006595
[2025-06-04 09:30:16] 2025-06-04 13:30:04,391 | INFO     | errors: (none)
[2025-06-04 09:30:16] 2025-06-04 13:30:04,391 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:30:16] 2025-06-04 13:30:04,391 | INFO     | pilot state: finished 
[2025-06-04 09:30:16] 2025-06-04 13:30:04,391 | INFO     | transexitcode: 0
[2025-06-04 09:30:16] 2025-06-04 13:30:04,391 | INFO     | exeerrorcode: 0
[2025-06-04 09:30:16] 2025-06-04 13:30:04,391 | INFO     | exeerrordiag: 
[2025-06-04 09:30:16] 2025-06-04 13:30:04,391 | INFO     | exitcode: 0
[2025-06-04 09:30:16] 2025-06-04 13:30:04,391 | INFO     | exitmsg: OK
[2025-06-04 09:30:16] 2025-06-04 13:30:04,391 | INFO     | cpuconsumptiontime: 12973 s
[2025-06-04 09:30:16] 2025-06-04 13:30:04,391 | INFO     | nevents: 400
[2025-06-04 09:30:16] 2025-06-04 13:30:04,391 | INFO     | neventsw: 0
[2025-06-04 09:30:16] 2025-06-04 13:30:04,391 | INFO     | pid: 491568
[2025-06-04 09:30:16] 2025-06-04 13:30:04,391 | INFO     | pgrp: 491568
[2025-06-04 09:30:16] 2025-06-04 13:30:04,391 | INFO     | corecount: 8
[2025-06-04 09:30:16] 2025-06-04 13:30:04,391 | INFO     | event service: False
[2025-06-04 09:30:16] 2025-06-04 13:30:04,391 | INFO     | sizes: {0: 2397292, 1: 2397292, 3: 2397526, 11: 2397554, 2222: 2422598, 2223: 2431539, 2226: 2431723, 2230: 2431893}
[2025-06-04 09:30:16] 2025-06-04 13:30:04,391 | INFO     | --------------------------------------------------
[2025-06-04 09:30:16] 2025-06-04 13:30:04,391 | INFO     | 
[2025-06-04 09:30:16] 2025-06-04 13:30:04,391 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 09:30:16] 2025-06-04 13:30:04,407 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:30:16] 2025-06-04 13:30:04,407 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:30:16] 2025-06-04 13:30:04,407 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:30:16] 2025-06-04 13:30:04,407 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:30:16] 2025-06-04 13:30:04,407 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:30:16] 2025-06-04 13:30:04,407 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:30:16] 2025-06-04 13:30:04,407 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:30:16] 2025-06-04 13:30:04,407 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:30:16] 2025-06-04 13:30:04,408 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:30:16] 2025-06-04 13:30:04,408 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:30:16] 2025-06-04 13:30:04,408 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:30:16] 2025-06-04 13:30:04,408 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:30:16] 2025-06-04 13:30:04,408 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:30:16] 2025-06-04 13:30:04,408 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:30:16] 2025-06-04 13:30:04,408 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:30:16] 2025-06-04 13:30:04,408 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:30:16] 2025-06-04 13:30:04,408 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:30:16] 2025-06-04 13:30:04,408 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:30:16] 2025-06-04 13:30:04,408 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:30:16] 2025-06-04 13:30:04,408 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:30:16] 2025-06-04 13:30:04,408 | INFO     | job 6679200608 has completed (purged errors)
[2025-06-04 09:30:16] 2025-06-04 13:30:04,408 | INFO     | overall cleanup function is called
[2025-06-04 09:30:16] 2025-06-04 13:30:05,415 | INFO     | --- collectZombieJob: --- 10, [491568]
[2025-06-04 09:30:16] 2025-06-04 13:30:05,416 | INFO     | zombie collector waiting for pid 491568
[2025-06-04 09:30:16] 2025-06-04 13:30:05,416 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:30:16] 2025-06-04 13:30:05,416 | INFO     | collected zombie processes
[2025-06-04 09:30:16] 2025-06-04 13:30:05,416 | INFO     | will attempt to kill all subprocesses of pid=491568
[2025-06-04 09:30:16] 2025-06-04 13:30:05,603 | INFO     | process IDs to be killed: [491568] (in reverse order)
[2025-06-04 09:30:16] 2025-06-04 13:30:05,685 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:30:16] 2025-06-04 13:30:05,685 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:30:16] 2025-06-04 13:30:05,698 | INFO     | did not find any defunct processes belonging to 491568
[2025-06-04 09:30:16] 2025-06-04 13:30:05,709 | INFO     | did not find any defunct processes belonging to 491568
[2025-06-04 09:30:16] 2025-06-04 13:30:05,709 | INFO     | ready for new job
[2025-06-04 09:30:16] 2025-06-04 13:30:05,710 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:30:16] 2025-06-04 13:30:05,711 | INFO     | **************************************
[2025-06-04 09:30:16] 2025-06-04 13:30:05,711 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:30:16] 2025-06-04 13:30:05,711 | INFO     | **************************************
[2025-06-04 09:30:16] 2025-06-04 13:30:05,711 | INFO     | 
[2025-06-04 09:30:16] 2025-06-04 13:30:05,727 | INFO     | architecture information:
[2025-06-04 09:30:16] 2025-06-04 13:30:05,727 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:30:16] 2025-06-04 13:30:05,735 | INFO     | cat /etc/os-release:
[2025-06-04 09:30:16] NAME="CentOS Linux"
[2025-06-04 09:30:16] VERSION="7 (Core)"
[2025-06-04 09:30:16] ID="centos"
[2025-06-04 09:30:16] ID_LIKE="rhel fedora"
[2025-06-04 09:30:16] VERSION_ID="7"
[2025-06-04 09:30:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:30:16] ANSI_COLOR="0;31"
[2025-06-04 09:30:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:30:16] HOME_URL="https://www.centos.org/"
[2025-06-04 09:30:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:30:16] 
[2025-06-04 09:30:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:30:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:30:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:30:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:30:16] 
[2025-06-04 09:30:16] 2025-06-04 13:30:05,735 | INFO     | **************************************
[2025-06-04 09:30:16] 2025-06-04 13:30:06,238 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 09:30:16] 2025-06-04 13:30:06,251 | INFO     | sufficient remaining disk space (74749837312 B)
[2025-06-04 09:30:16] 2025-06-04 13:30:06,251 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:30:16] 2025-06-04 13:30:06,251 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:30:16] 2025-06-04 13:30:06,251 | INFO     | update_server=False
[2025-06-04 09:30:16] 2025-06-04 13:30:06,251 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:30:16] 2025-06-04 13:30:06,251 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:30:16] 2025-06-04 13:30:06,252 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:30:16] 2025-06-04 13:30:06,309 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:30:16] 2025-06-04 13:30:06,309 | INFO     | aborting loop
[2025-06-04 09:30:16] 2025-06-04 13:30:07,007 | INFO     | all data control threads have been joined
[2025-06-04 09:30:16] 2025-06-04 13:30:07,186 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:30:16] 2025-06-04 13:30:07,186 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:30:16] 2025-06-04 13:30:07,186 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:30:16] 2025-06-04 13:30:07,256 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:30:16] 2025-06-04 13:30:07,257 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:30:16] 2025-06-04 13:30:07,315 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:30:16] 2025-06-04 13:30:07,410 | INFO     | all job control threads have been joined
[2025-06-04 09:30:16] 2025-06-04 13:30:07,432 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:30:16] 2025-06-04 13:30:07,509 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:30:16] 2025-06-04 13:30:07,595 | INFO     | [job] validate thread has finished
[2025-06-04 09:30:16] 2025-06-04 13:30:07,655 | INFO     | all payload control threads have been joined
[2025-06-04 09:30:16] 2025-06-04 13:30:07,746 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:30:16] 2025-06-04 13:30:07,839 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:30:16] 2025-06-04 13:30:07,922 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:30:16] 2025-06-04 13:30:08,013 | INFO     | [data] control thread has finished
[2025-06-04 09:30:16] 2025-06-04 13:30:08,055 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:30:16] 2025-06-04 13:30:08,111 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:30:16] 2025-06-04 13:30:08,415 | INFO     | [job] control thread has finished
[2025-06-04 09:30:16] 2025-06-04 13:30:08,661 | INFO     | [payload] control thread has finished
[2025-06-04 09:30:16] 2025-06-04 13:30:08,697 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:30:16] 2025-06-04 13:30:09,437 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:30:16] 2025-06-04 13:30:10,258 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:30:16] 2025-06-04 13:30:11,548 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140007236122432)>', '<ExcThread(monitor, started 140006471497472)>']
[2025-06-04 09:30:16] 2025-06-04 13:30:12,202 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:30:16] 2025-06-04 13:30:12,202 | INFO     | [monitor] control thread has ended
[2025-06-04 09:30:16] 2025-06-04 13:30:16,573 | INFO     | all workflow threads have been joined
[2025-06-04 09:30:16] 2025-06-04 13:30:16,573 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:30:16] 2025-06-04 13:30:16,573 | INFO     | traces error code: 0
[2025-06-04 09:30:16] 2025-06-04 13:30:16,573 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:30:16] 2025-06-04 13:30:16,656 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:30:16] 2025-06-04 13:30:16,659 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:30:16] 2025-06-04 13:30:16,660 [wrapper] pilotpid: 481755
[2025-06-04 09:30:16] 2025-06-04 13:30:16,662 [wrapper] Pilot exit status: 0
[2025-06-04 09:30:16] 2025-06-04 13:30:16,669 [wrapper] pandaids: 6679200608
[2025-06-04 09:30:16] 2025-06-04 13:30:16,729 [wrapper] cleanup supervisor_pilot  654916 481759
[2025-06-04 09:30:16] 2025-06-04 13:30:16,731 [wrapper] Test setup, not cleaning
[2025-06-04 09:30:16] 2025-06-04 13:30:16,733 [wrapper] apfmon messages muted
[2025-06-04 09:30:16] 2025-06-04 13:30:16,735 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:30:16] 2025-06-04 13:30:16,737 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:30:16]  *** Error codes and diagnostics ***
[2025-06-04 09:30:16]     "exeErrorCode": 0,
[2025-06-04 09:30:16]     "exeErrorDiag": "",
[2025-06-04 09:30:16]     "pilotErrorCode": 0,
[2025-06-04 09:30:16]     "pilotErrorDiag": "",
[2025-06-04 09:30:16]  *** Listing of results directory ***
[2025-06-04 09:30:16] total 383552
[2025-06-04 09:30:16] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 09:30:16] -rwx------. 1 boincer umatlas     37140 Jun  4 04:54 runpilot2-wrapper.sh
[2025-06-04 09:30:16] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:54 queuedata.json
[2025-06-04 09:30:16] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:30:16] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:52 run_atlas
[2025-06-04 09:30:16] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:52 job.xml
[2025-06-04 09:30:16] -rw-r--r--. 2 boincer umatlas 214817835 Jun  4 08:52 EVNT.45006593._001378.pool.root.1
[2025-06-04 09:30:16] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:52 start_atlas.sh
[2025-06-04 09:30:16] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:52 shared
[2025-06-04 09:30:16] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 08:52 input.tar.gz
[2025-06-04 09:30:16] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:52 boinc_lockfile
[2025-06-04 09:30:16] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 08:52 pandaJob.out
[2025-06-04 09:30:16] -rw-------. 1 boincer umatlas    986811 Jun  4 08:52 agis_schedconf.cvmfs.json
[2025-06-04 09:30:16] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:52 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:30:16] drwx------. 4 boincer umatlas      4096 Jun  4 08:52 pilot3
[2025-06-04 09:30:16] -rw-------. 1 boincer umatlas        95 Jun  4 09:29 pilot_heartbeat.json
[2025-06-04 09:30:16] -rw-r--r--. 1 boincer umatlas      7159 Jun  4 09:29 init_data.xml
[2025-06-04 09:30:16] -rw-------. 1 boincer umatlas 173046158 Jun  4 09:29 HITS.45006595._055993.pool.root.1
[2025-06-04 09:30:16] -rw-r--r--. 1 boincer umatlas       529 Jun  4 09:29 boinc_task_state.xml
[2025-06-04 09:30:16] -rw-------. 1 boincer umatlas      1032 Jun  4 09:29 memory_monitor_summary.json
[2025-06-04 09:30:16] -rw-------. 1 boincer umatlas    281419 Jun  4 09:29 log.45006595._055993.job.log.tgz.1
[2025-06-04 09:30:16] -rw-------. 1 boincer umatlas      7687 Jun  4 09:30 heartbeat.json
[2025-06-04 09:30:16] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:30 boinc_mmap_file
[2025-06-04 09:30:16] -rw-r--r--. 1 boincer umatlas        27 Jun  4 09:30 wrapper_checkpoint.txt
[2025-06-04 09:30:16] -rw-------. 1 boincer umatlas      4353 Jun  4 09:30 pilotlog.txt
[2025-06-04 09:30:16] -rw-------. 1 boincer umatlas    248804 Jun  4 09:30 log.45006595._055993.job.log.1
[2025-06-04 09:30:16] -rw-------. 1 boincer umatlas       357 Jun  4 09:30 output.list
[2025-06-04 09:30:16] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:30 runtime_log
[2025-06-04 09:30:16] -rw-------. 1 boincer umatlas    552960 Jun  4 09:30 result.tar.gz
[2025-06-04 09:30:16] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 09:30 runtime_log.err
[2025-06-04 09:30:16] -rw-------. 1 boincer umatlas       649 Jun  4 09:30 rjKKDm73yg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmSzaKDmdWK7Cn.diag
[2025-06-04 09:30:16] -rw-r--r--. 1 boincer umatlas     21273 Jun  4 09:30 stderr.txt
[2025-06-04 09:30:16] HITS file was successfully produced:
[2025-06-04 09:30:16] -rw-------. 1 boincer umatlas 173046158 Jun  4 09:29 shared/HITS.pool.root.1
[2025-06-04 09:30:16]  *** Contents of shared directory: ***
[2025-06-04 09:30:16] total 379840
[2025-06-04 09:30:16] -rw-r--r--. 2 boincer umatlas 214817835 Jun  4 08:52 ATLAS.root_0
[2025-06-04 09:30:16] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:52 start_atlas.sh
[2025-06-04 09:30:16] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 08:52 input.tar.gz
[2025-06-04 09:30:16] -rw-------. 1 boincer umatlas 173046158 Jun  4 09:29 HITS.pool.root.1
[2025-06-04 09:30:16] -rw-------. 1 boincer umatlas    552960 Jun  4 09:30 result.tar.gz
09:30:18 (472965): run_atlas exited; CPU time 13000.593940
09:30:18 (472965): called boinc_finish(0)

</stderr_txt>
]]>

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