Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:50:00 (2169828): wrapper (7.7.26015): starting
08:50:00 (2169828): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:50:00] Arguments: --nthreads 8
[2025-06-04 08:50:00] Threads: 8
[2025-06-04 08:50:00] Checking for CVMFS
[2025-06-04 08:50:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:50:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:50:01] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:50:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:50:01] 2.12.6.0 8763 32808 634688 146780 1 197 30073051 32935937 14337 16776704 0 461606040 99.683 367201492 37043 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:50:01] CVMFS is ok
[2025-06-04 08:50:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:50:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:50:01] Further information can be found at the LHC@home message board.
[2025-06-04 08:50:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:50:01] Checking for apptainer binary...
[2025-06-04 08:50:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:50:01] Running /usr/bin/apptainer --version
[2025-06-04 08:50:01] apptainer version 1.4.1-1.el9
[2025-06-04 08:50:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:50:01] c7-9-14.aglt2.org
[2025-06-04 08:50:01] apptainer works
[2025-06-04 08:50:01] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:50:01] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:50:01] Starting ATLAS job with PandaID=6679113593
[2025-06-04 08:50:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:26:48]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:26:48]  is_tar=False
[2025-06-04 09:26:48]  lfn=log.45006595._055864.job.log.tgz.1
[2025-06-04 09:26:48]  mtime=0
[2025-06-04 09:26:48]  protocol_id=None
[2025-06-04 09:26:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:26:48]  replicas=None
[2025-06-04 09:26:48]  scope=mc23_13p6TeV
[2025-06-04 09:26:48]  status=None
[2025-06-04 09:26:48]  status_code=0
[2025-06-04 09:26:48]  storage_token=
[2025-06-04 09:26:48]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6679113593/log.45006595._055864.job.log.tgz.1
[2025-06-04 09:26:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/36/log.45006595._055864.job.log.tgz.1
[2025-06-04 09:26:48]  workdir=None
[2025-06-04 09:26:48] ]
[2025-06-04 09:26:48] 2025-06-04 13:26:24,274 | INFO     | transferring file log.45006595._055864.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6679113593/log.45006595._055864.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:26:48] 2025-06-04 13:26:24,274 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6679113593/log.45006595._055864.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._055864.job
[2025-06-04 09:26:48] 2025-06-04 13:26:24,290 | INFO     | adding to output.list: log.45006595._055864.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/36/log.45006595._055864.job.log.tg
[2025-06-04 09:26:48] 2025-06-04 13:26:24,290 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:26:48] 2025-06-04 13:26:24,290 | INFO     | summary of transferred files:
[2025-06-04 09:26:48] 2025-06-04 13:26:24,290 | INFO     |  -- lfn=log.45006595._055864.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:26:48] 2025-06-04 13:26:24,290 | INFO     | stage-out finished correctly
[2025-06-04 09:26:48] 2025-06-04 13:26:24,790 | WARNING  | process 2180231 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 09:26:48] 2025-06-04 13:26:24,790 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6679113593/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:26:48] 2025-06-04 13:26:24,987 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:26:48] 2025-06-04 13:26:25,019 | INFO     | job 6679113593 has state=finished
[2025-06-04 09:26:48] 2025-06-04 13:26:25,019 | INFO     | preparing for final server update for job 6679113593 in state='finished'
[2025-06-04 09:26:48] 2025-06-04 13:26:25,020 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:26:48] 2025-06-04 13:26:25,020 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:26:48] 2025-06-04 13:26:25,020 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:26:48] 2025-06-04 13:26:25,020 | INFO     | job 6679113593 has finished - writing final server update
[2025-06-04 09:26:48] 2025-06-04 13:26:25,020 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:26:48] 2025-06-04 13:26:25,041 | INFO     | executing command: lscpu
[2025-06-04 09:26:48] 2025-06-04 13:26:25,051 | INFO     | number of running child processes to parent process 2180231: 1
[2025-06-04 09:26:48] 2025-06-04 13:26:25,052 | INFO     | maximum number of monitored processes: 6
[2025-06-04 09:26:48] 2025-06-04 13:26:25,100 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:26:48] 2025-06-04 13:26:27,555 | INFO     | monitor loop #166: job 0:6679113593 is in state 'finished'
[2025-06-04 09:26:48] 2025-06-04 13:26:27,555 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:26:48] 2025-06-04 13:26:27,659 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:26:48] 2025-06-04 13:26:27,659 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6679113593/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:26:48] 2025-06-04 13:26:27,660 | INFO     | extracted standard info from prmon json
[2025-06-04 09:26:48] 2025-06-04 13:26:27,660 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:26:48] 2025-06-04 13:26:27,660 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:26:48] 2025-06-04 13:26:27,660 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:26:48] 2025-06-04 13:26:27,660 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:26:48] 2025-06-04 13:26:27,661 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:26:48] 2025-06-04 13:26:27,661 | INFO     | sum of square deviations: 7553630.0
[2025-06-04 09:26:48] 2025-06-04 13:26:27,661 | INFO     | sum of deviations: 2216451470.0
[2025-06-04 09:26:48] 2025-06-04 13:26:27,661 | INFO     | mean x: 1749042588.0
[2025-06-04 09:26:48] 2025-06-04 13:26:27,661 | INFO     | mean y: 2175228.7586206896
[2025-06-04 09:26:48] 2025-06-04 13:26:27,661 | INFO     | -- intersect: -513217033981.27747
[2025-06-04 09:26:48] 2025-06-04 13:26:27,661 | INFO     | intersect: -513217033981.27747
[2025-06-04 09:26:48] 2025-06-04 13:26:27,661 | INFO     | chi2: 0.6966979219295798
[2025-06-04 09:26:48] 2025-06-04 13:26:27,661 | INFO     | -- intersect: -513217033981.27747
[2025-06-04 09:26:48] 2025-06-04 13:26:27,661 | INFO     | current memory leak: 293.43 B/s (using 29 data points, chi2=0.70)
[2025-06-04 09:26:48] 2025-06-04 13:26:27,661 | INFO     | ..............................
[2025-06-04 09:26:48] 2025-06-04 13:26:27,661 | INFO     | . Timing measurements:
[2025-06-04 09:26:48] 2025-06-04 13:26:27,661 | INFO     | . get job = 0 s
[2025-06-04 09:26:48] 2025-06-04 13:26:27,661 | INFO     | . initial setup = 2 s
[2025-06-04 09:26:48] 2025-06-04 13:26:27,661 | INFO     | . payload setup = 4 s
[2025-06-04 09:26:48] 2025-06-04 13:26:27,661 | INFO     | . stage-in = 0 s
[2025-06-04 09:26:48] 2025-06-04 13:26:27,661 | INFO     | . payload execution = 2155 s
[2025-06-04 09:26:48] 2025-06-04 13:26:27,661 | INFO     | . stage-out = 0 s
[2025-06-04 09:26:48] 2025-06-04 13:26:27,662 | INFO     | . log creation = 0 s
[2025-06-04 09:26:48] 2025-06-04 13:26:27,662 | INFO     | ..............................
[2025-06-04 09:26:48] 2025-06-04 13:26:27,697 | INFO     | 
[2025-06-04 09:26:48] 2025-06-04 13:26:27,698 | INFO     | job summary report
[2025-06-04 09:26:48] 2025-06-04 13:26:27,698 | INFO     | --------------------------------------------------
[2025-06-04 09:26:48] 2025-06-04 13:26:27,698 | INFO     | PanDA job id: 6679113593
[2025-06-04 09:26:48] 2025-06-04 13:26:27,698 | INFO     | task id: 45006595
[2025-06-04 09:26:48] 2025-06-04 13:26:27,698 | INFO     | errors: (none)
[2025-06-04 09:26:48] 2025-06-04 13:26:27,698 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:26:48] 2025-06-04 13:26:27,698 | INFO     | pilot state: finished 
[2025-06-04 09:26:48] 2025-06-04 13:26:27,698 | INFO     | transexitcode: 0
[2025-06-04 09:26:48] 2025-06-04 13:26:27,698 | INFO     | exeerrorcode: 0
[2025-06-04 09:26:48] 2025-06-04 13:26:27,698 | INFO     | exeerrordiag: 
[2025-06-04 09:26:48] 2025-06-04 13:26:27,698 | INFO     | exitcode: 0
[2025-06-04 09:26:48] 2025-06-04 13:26:27,698 | INFO     | exitmsg: OK
[2025-06-04 09:26:48] 2025-06-04 13:26:27,698 | INFO     | cpuconsumptiontime: 13281 s
[2025-06-04 09:26:48] 2025-06-04 13:26:27,698 | INFO     | nevents: 400
[2025-06-04 09:26:48] 2025-06-04 13:26:27,698 | INFO     | neventsw: 0
[2025-06-04 09:26:48] 2025-06-04 13:26:27,698 | INFO     | pid: 2180231
[2025-06-04 09:26:48] 2025-06-04 13:26:27,698 | INFO     | pgrp: 2180231
[2025-06-04 09:26:48] 2025-06-04 13:26:27,698 | INFO     | corecount: 8
[2025-06-04 09:26:48] 2025-06-04 13:26:27,698 | INFO     | event service: False
[2025-06-04 09:26:48] 2025-06-04 13:26:27,698 | INFO     | sizes: {0: 2397292, 3: 2397498, 11: 2397526, 2162: 2431484, 2163: 2431484, 2166: 2431654}
[2025-06-04 09:26:48] 2025-06-04 13:26:27,698 | INFO     | --------------------------------------------------
[2025-06-04 09:26:48] 2025-06-04 13:26:27,698 | INFO     | 
[2025-06-04 09:26:48] 2025-06-04 13:26:27,698 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 09:26:48] 2025-06-04 13:26:27,712 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:26:48] 2025-06-04 13:26:27,712 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:26:48] 2025-06-04 13:26:27,712 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:26:48] 2025-06-04 13:26:27,712 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:26:48] 2025-06-04 13:26:27,712 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:26:48] 2025-06-04 13:26:27,713 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:26:48] 2025-06-04 13:26:27,713 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:26:48] 2025-06-04 13:26:27,713 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:26:48] 2025-06-04 13:26:27,713 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:26:48] 2025-06-04 13:26:27,713 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:26:48] 2025-06-04 13:26:27,713 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:26:48] 2025-06-04 13:26:27,713 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:26:48] 2025-06-04 13:26:27,713 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:26:48] 2025-06-04 13:26:27,713 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:26:48] 2025-06-04 13:26:27,713 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:26:48] 2025-06-04 13:26:27,713 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:26:48] 2025-06-04 13:26:27,713 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:26:48] 2025-06-04 13:26:27,713 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:26:48] 2025-06-04 13:26:27,713 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:26:48] 2025-06-04 13:26:27,713 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:26:48] 2025-06-04 13:26:27,713 | INFO     | job 6679113593 has completed (purged errors)
[2025-06-04 09:26:48] 2025-06-04 13:26:27,713 | INFO     | overall cleanup function is called
[2025-06-04 09:26:48] 2025-06-04 13:26:28,720 | INFO     | --- collectZombieJob: --- 10, [2180231]
[2025-06-04 09:26:48] 2025-06-04 13:26:28,720 | INFO     | zombie collector waiting for pid 2180231
[2025-06-04 09:26:48] 2025-06-04 13:26:28,720 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:26:48] 2025-06-04 13:26:28,720 | INFO     | collected zombie processes
[2025-06-04 09:26:48] 2025-06-04 13:26:28,720 | INFO     | will attempt to kill all subprocesses of pid=2180231
[2025-06-04 09:26:48] 2025-06-04 13:26:28,921 | INFO     | process IDs to be killed: [2180231] (in reverse order)
[2025-06-04 09:26:48] 2025-06-04 13:26:29,010 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:26:48] 2025-06-04 13:26:29,010 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:26:48] 2025-06-04 13:26:29,021 | INFO     | did not find any defunct processes belonging to 2180231
[2025-06-04 09:26:48] 2025-06-04 13:26:29,029 | INFO     | did not find any defunct processes belonging to 2180231
[2025-06-04 09:26:48] 2025-06-04 13:26:29,029 | INFO     | ready for new job
[2025-06-04 09:26:48] 2025-06-04 13:26:29,029 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:26:48] 2025-06-04 13:26:29,031 | INFO     | **************************************
[2025-06-04 09:26:48] 2025-06-04 13:26:29,031 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:26:48] 2025-06-04 13:26:29,031 | INFO     | **************************************
[2025-06-04 09:26:48] 2025-06-04 13:26:29,031 | INFO     | 
[2025-06-04 09:26:48] 2025-06-04 13:26:29,046 | INFO     | architecture information:
[2025-06-04 09:26:48] 2025-06-04 13:26:29,046 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:26:48] 2025-06-04 13:26:29,058 | INFO     | cat /etc/os-release:
[2025-06-04 09:26:48] NAME="CentOS Linux"
[2025-06-04 09:26:48] VERSION="7 (Core)"
[2025-06-04 09:26:48] ID="centos"
[2025-06-04 09:26:48] ID_LIKE="rhel fedora"
[2025-06-04 09:26:48] VERSION_ID="7"
[2025-06-04 09:26:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:26:48] ANSI_COLOR="0;31"
[2025-06-04 09:26:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:26:48] HOME_URL="https://www.centos.org/"
[2025-06-04 09:26:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:26:48] 
[2025-06-04 09:26:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:26:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:26:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:26:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:26:48] 
[2025-06-04 09:26:48] 2025-06-04 13:26:29,058 | INFO     | **************************************
[2025-06-04 09:26:48] 2025-06-04 13:26:29,561 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 09:26:48] 2025-06-04 13:26:29,572 | INFO     | sufficient remaining disk space (74684825600 B)
[2025-06-04 09:26:48] 2025-06-04 13:26:29,572 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:26:48] 2025-06-04 13:26:29,572 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:26:48] 2025-06-04 13:26:29,572 | INFO     | update_server=False
[2025-06-04 09:26:48] 2025-06-04 13:26:29,572 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:26:48] 2025-06-04 13:26:29,572 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:26:48] 2025-06-04 13:26:29,572 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:26:48] 2025-06-04 13:26:29,573 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:26:48] 2025-06-04 13:26:29,573 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:26:48] 2025-06-04 13:26:29,573 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:26:48] 2025-06-04 13:26:29,827 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:26:48] 2025-06-04 13:26:29,859 | INFO     | all data control threads have been joined
[2025-06-04 09:26:48] 2025-06-04 13:26:30,058 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 09:26:48] 2025-06-04 13:26:30,058 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 09:26:48] 2025-06-04 13:26:30,058 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:26:48] 2025-06-04 13:26:30,058 | INFO     | will abort loop
[2025-06-04 09:26:48] 2025-06-04 13:26:30,577 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:26:48] 2025-06-04 13:26:30,578 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:26:48] 2025-06-04 13:26:30,656 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:26:48] 2025-06-04 13:26:30,762 | INFO     | all job control threads have been joined
[2025-06-04 09:26:48] 2025-06-04 13:26:30,853 | INFO     | [job] validate thread has finished
[2025-06-04 09:26:48] 2025-06-04 13:26:30,860 | INFO     | all payload control threads have been joined
[2025-06-04 09:26:48] 2025-06-04 13:26:30,864 | INFO     | [data] control thread has finished
[2025-06-04 09:26:48] 2025-06-04 13:26:30,908 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:26:48] 2025-06-04 13:26:30,988 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:26:48] 2025-06-04 13:26:31,025 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:26:48] 2025-06-04 13:26:31,054 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:26:48] 2025-06-04 13:26:31,064 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:26:48] 2025-06-04 13:26:31,364 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:26:48] 2025-06-04 13:26:31,768 | INFO     | [job] control thread has finished
[2025-06-04 09:26:48] 2025-06-04 13:26:31,832 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:26:48] 2025-06-04 13:26:31,865 | INFO     | [payload] control thread has finished
[2025-06-04 09:26:48] 2025-06-04 13:26:32,040 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:26:48] 2025-06-04 13:26:35,031 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:26:48] 2025-06-04 13:26:40,008 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:26:48] 2025-06-04 13:26:41,013 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:26:48] 2025-06-04 13:26:42,924 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139717641459520)>', '<ExcThread(monitor, started 139717030967040)>']
[2025-06-04 09:26:48] 2025-06-04 13:26:43,640 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:26:48] 2025-06-04 13:26:43,640 | INFO     | [monitor] control thread has ended
[2025-06-04 09:26:48] 2025-06-04 13:26:47,931 | INFO     | all workflow threads have been joined
[2025-06-04 09:26:48] 2025-06-04 13:26:47,931 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:26:48] 2025-06-04 13:26:47,931 | INFO     | traces error code: 0
[2025-06-04 09:26:48] 2025-06-04 13:26:47,931 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:26:48] 2025-06-04 13:26:48,060 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:26:48] 2025-06-04 13:26:48,062 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:26:48] 2025-06-04 13:26:48,064 [wrapper] pilotpid: 2173609
[2025-06-04 09:26:48] 2025-06-04 13:26:48,066 [wrapper] Pilot exit status: 0
[2025-06-04 09:26:48] 2025-06-04 13:26:48,073 [wrapper] pandaids: 6679113593
[2025-06-04 09:26:48] 2025-06-04 13:26:48,135 [wrapper] cleanup supervisor_pilot 2303238 2173610
[2025-06-04 09:26:48] 2025-06-04 13:26:48,137 [wrapper] Test setup, not cleaning
[2025-06-04 09:26:48] 2025-06-04 13:26:48,139 [wrapper] apfmon messages muted
[2025-06-04 09:26:48] 2025-06-04 13:26:48,141 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:26:48] 2025-06-04 13:26:48,143 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:26:48]  *** Error codes and diagnostics ***
[2025-06-04 09:26:48]     "exeErrorCode": 0,
[2025-06-04 09:26:48]     "exeErrorDiag": "",
[2025-06-04 09:26:48]     "pilotErrorCode": 0,
[2025-06-04 09:26:48]     "pilotErrorDiag": "",
[2025-06-04 09:26:48]  *** Listing of results directory ***
[2025-06-04 09:26:48] total 388756
[2025-06-04 09:26:48] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 09:26:48] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:48 queuedata.json
[2025-06-04 09:26:48] -rwx------. 1 boincer umatlas     37140 Jun  4 04:48 runpilot2-wrapper.sh
[2025-06-04 09:26:48] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:26:48] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:50 run_atlas
[2025-06-04 09:26:48] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:50 job.xml
[2025-06-04 09:26:48] -rw-r--r--. 2 boincer umatlas 217100333 Jun  4 08:50 EVNT.45006593._001339.pool.root.1
[2025-06-04 09:26:48] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:50 start_atlas.sh
[2025-06-04 09:26:48] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:50 shared
[2025-06-04 09:26:48] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 08:50 input.tar.gz
[2025-06-04 09:26:48] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:50 boinc_lockfile
[2025-06-04 09:26:48] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 08:50 pandaJob.out
[2025-06-04 09:26:48] -rw-------. 1 boincer umatlas    986811 Jun  4 08:50 agis_schedconf.cvmfs.json
[2025-06-04 09:26:48] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:50 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:26:48] drwx------. 4 boincer umatlas      4096 Jun  4 08:50 pilot3
[2025-06-04 09:26:48] -rw-r--r--. 1 boincer umatlas      7159 Jun  4 09:21 init_data.xml
[2025-06-04 09:26:48] -rw-------. 1 boincer umatlas        95 Jun  4 09:25 pilot_heartbeat.json
[2025-06-04 09:26:48] -rw-------. 1 boincer umatlas 176126661 Jun  4 09:26 HITS.45006595._055864.pool.root.1
[2025-06-04 09:26:48] -rw-r--r--. 1 boincer umatlas       529 Jun  4 09:26 boinc_task_state.xml
[2025-06-04 09:26:48] -rw-------. 1 boincer umatlas      1030 Jun  4 09:26 memory_monitor_summary.json
[2025-06-04 09:26:48] -rw-------. 1 boincer umatlas    269565 Jun  4 09:26 log.45006595._055864.job.log.tgz.1
[2025-06-04 09:26:48] -rw-------. 1 boincer umatlas      7685 Jun  4 09:26 heartbeat.json
[2025-06-04 09:26:48] -rw-r--r--. 1 boincer umatlas        27 Jun  4 09:26 wrapper_checkpoint.txt
[2025-06-04 09:26:48] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:26 boinc_mmap_file
[2025-06-04 09:26:48] -rw-------. 1 boincer umatlas      4734 Jun  4 09:26 pilotlog.txt
[2025-06-04 09:26:48] -rw-------. 1 boincer umatlas    243676 Jun  4 09:26 log.45006595._055864.job.log.1
[2025-06-04 09:26:48] -rw-------. 1 boincer umatlas       357 Jun  4 09:26 output.list
[2025-06-04 09:26:48] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:26 runtime_log
[2025-06-04 09:26:48] -rw-------. 1 boincer umatlas    532480 Jun  4 09:26 result.tar.gz
[2025-06-04 09:26:48] -rw-------. 1 boincer umatlas       649 Jun  4 09:26 tPQNDm3yyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYpnKDm1UH8ym.diag
[2025-06-04 09:26:48] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 09:26 runtime_log.err
[2025-06-04 09:26:48] -rw-r--r--. 1 boincer umatlas     21465 Jun  4 09:26 stderr.txt
[2025-06-04 09:26:48] HITS file was successfully produced:
[2025-06-04 09:26:48] -rw-------. 1 boincer umatlas 176126661 Jun  4 09:26 shared/HITS.pool.root.1
[2025-06-04 09:26:48]  *** Contents of shared directory: ***
[2025-06-04 09:26:48] total 385060
[2025-06-04 09:26:48] -rw-r--r--. 2 boincer umatlas 217100333 Jun  4 08:50 ATLAS.root_0
[2025-06-04 09:26:48] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:50 start_atlas.sh
[2025-06-04 09:26:48] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 08:50 input.tar.gz
[2025-06-04 09:26:48] -rw-------. 1 boincer umatlas 176126661 Jun  4 09:26 HITS.pool.root.1
[2025-06-04 09:26:48] -rw-------. 1 boincer umatlas    532480 Jun  4 09:26 result.tar.gz
09:26:49 (2169828): run_atlas exited; CPU time 13305.991110
09:26:49 (2169828): called boinc_finish(0)

</stderr_txt>
]]>

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