Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
15:04:23 (558427): wrapper (7.7.26015): starting
15:04:23 (558427): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 15:04:23] Arguments: --nthreads 4
[2025-06-04 15:04:23] Threads: 4
[2025-06-04 15:04:23] Checking for CVMFS
[2025-06-04 15:04:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 15:04:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 15:04:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 15:04:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 15:04:24] 2.12.7.0 470199 112 51016 146780 3 187 8510847 10240001 1822 130560 0 244229 99.991 72922 4718 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-06-04 15:04:24] CVMFS is ok
[2025-06-04 15:04:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:04:24] Checking for apptainer binary...
[2025-06-04 15:04:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 15:04:24] Running /usr/bin/apptainer --version
[2025-06-04 15:04:24] apptainer version 1.3.4
[2025-06-04 15:04:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:04:24] julianvlneu
[2025-06-04 15:04:24] apptainer works
[2025-06-04 15:04:24] Set ATHENA_PROC_NUMBER=4
[2025-06-04 15:04:24] Set ATHENA_CORE_NUMBER=4
[2025-06-04 15:04:24] Starting ATLAS job with PandaID=6679108752
[2025-06-04 15:04:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 15:51:33]  *** The last 200 lines of the pilot log: ***
[2025-06-04 15:51:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 15:51:33]  is_altstaged=None
[2025-06-04 15:51:33]  is_tar=False
[2025-06-04 15:51:33]  lfn=log.45006595._055860.job.log.tgz.1
[2025-06-04 15:51:33]  mtime=0
[2025-06-04 15:51:33]  protocol_id=None
[2025-06-04 15:51:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 15:51:33]  replicas=None
[2025-06-04 15:51:33]  scope=mc23_13p6TeV
[2025-06-04 15:51:33]  status=None
[2025-06-04 15:51:33]  status_code=0
[2025-06-04 15:51:33]  storage_token=
[2025-06-04 15:51:33]  surl=/var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6679108752/log.45006595._055860.job.log.tgz.1
[2025-06-04 15:51:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/67/9d/log.45006595._055860.job.log.tgz.1
[2025-06-04 15:51:33]  workdir=None
[2025-06-04 15:51:33] ]
[2025-06-04 15:51:33] 2025-06-04 13:51:10,593 | INFO     | transferring file log.45006595._055860.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6679108752/log.45006595._055860.job.log.tgz.1 to /var/li
[2025-06-04 15:51:33] 2025-06-04 13:51:10,593 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6679108752/log.45006595._055860.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2025-06-04 15:51:33] 2025-06-04 13:51:10,614 | INFO     | adding to output.list: log.45006595._055860.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/67/9d/log.45006595._055860.job.log.tg
[2025-06-04 15:51:33] 2025-06-04 13:51:10,615 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 15:51:33] 2025-06-04 13:51:10,615 | INFO     | summary of transferred files:
[2025-06-04 15:51:33] 2025-06-04 13:51:10,615 | INFO     |  -- lfn=log.45006595._055860.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 15:51:33] 2025-06-04 13:51:10,616 | INFO     | stage-out finished correctly
[2025-06-04 15:51:33] 2025-06-04 13:51:12,523 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 15:51:33] 2025-06-04 13:51:12,550 | INFO     | job 6679108752 has state=finished
[2025-06-04 15:51:33] 2025-06-04 13:51:12,550 | INFO     | preparing for final server update for job 6679108752 in state='finished'
[2025-06-04 15:51:33] 2025-06-04 13:51:12,551 | INFO     | this job has now completed (state=finished)
[2025-06-04 15:51:33] 2025-06-04 13:51:12,551 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 15:51:33] 2025-06-04 13:51:12,551 | INFO     | log transfer has been attempted: DONE
[2025-06-04 15:51:33] 2025-06-04 13:51:12,551 | INFO     | job 6679108752 has finished - writing final server update
[2025-06-04 15:51:33] 2025-06-04 13:51:12,551 | INFO     | total number of processed events: 400 (read)
[2025-06-04 15:51:33] 2025-06-04 13:51:12,552 | INFO     | executing command: lscpu
[2025-06-04 15:51:33] 2025-06-04 13:51:12,575 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 15:51:33] 2025-06-04 13:51:15,646 | INFO     | PID=562164 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 15:51:33] 2025-06-04 13:51:15,647 | INFO     | .. there are 3 such processes running
[2025-06-04 15:51:33] 2025-06-04 13:51:15,673 | WARNING  | process 568840 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 15:51:33] 2025-06-04 13:51:15,673 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6679108752/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 15:51:33] 2025-06-04 13:51:15,793 | INFO     | number of running child processes to parent process 568840: 1
[2025-06-04 15:51:33] 2025-06-04 13:51:15,794 | INFO     | maximum number of monitored processes: 7
[2025-06-04 15:51:33] 2025-06-04 13:51:17,911 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 15:51:33] 2025-06-04 13:51:17,912 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6679108752/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 15:51:33] 2025-06-04 13:51:17,912 | INFO     | extracted standard info from prmon json
[2025-06-04 15:51:33] 2025-06-04 13:51:17,912 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 15:51:33] 2025-06-04 13:51:17,912 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 15:51:33] 2025-06-04 13:51:17,912 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 15:51:33] 2025-06-04 13:51:17,912 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 15:51:33] 2025-06-04 13:51:17,913 | INFO     | fitting pss+swap vs Time
[2025-06-04 15:51:33] 2025-06-04 13:51:17,913 | INFO     | sum of square deviations: 18381740.0
[2025-06-04 15:51:33] 2025-06-04 13:51:17,913 | INFO     | sum of deviations: -1981927393.0000002
[2025-06-04 15:51:33] 2025-06-04 13:51:17,913 | INFO     | mean x: 1749043775.0
[2025-06-04 15:51:33] 2025-06-04 13:51:17,913 | INFO     | mean y: 2398272.128205128
[2025-06-04 15:51:33] 2025-06-04 13:51:17,913 | INFO     | -- intersect: 188585077019.00577
[2025-06-04 15:51:33] 2025-06-04 13:51:17,913 | INFO     | intersect: 188585077019.00577
[2025-06-04 15:51:33] 2025-06-04 13:51:17,913 | INFO     | chi2: 0.012391495706669984
[2025-06-04 15:51:33] 2025-06-04 13:51:17,913 | INFO     | -- intersect: 188585077019.00577
[2025-06-04 15:51:33] 2025-06-04 13:51:17,913 | INFO     | current memory leak: -107.82 B/s (using 39 data points, chi2=0.01)
[2025-06-04 15:51:33] 2025-06-04 13:51:17,914 | INFO     | ..............................
[2025-06-04 15:51:33] 2025-06-04 13:51:17,914 | INFO     | . Timing measurements:
[2025-06-04 15:51:33] 2025-06-04 13:51:17,914 | INFO     | . get job = 0 s
[2025-06-04 15:51:33] 2025-06-04 13:51:17,914 | INFO     | . initial setup = 1 s
[2025-06-04 15:51:33] 2025-06-04 13:51:17,914 | INFO     | . payload setup = 10 s
[2025-06-04 15:51:33] 2025-06-04 13:51:17,914 | INFO     | . stage-in = 0 s
[2025-06-04 15:51:33] 2025-06-04 13:51:17,914 | INFO     | . payload execution = 2760 s
[2025-06-04 15:51:33] 2025-06-04 13:51:17,914 | INFO     | . stage-out = 0 s
[2025-06-04 15:51:33] 2025-06-04 13:51:17,914 | INFO     | . log creation = 0 s
[2025-06-04 15:51:33] 2025-06-04 13:51:17,914 | INFO     | ..............................
[2025-06-04 15:51:33] 2025-06-04 13:51:18,273 | INFO     | 
[2025-06-04 15:51:33] 2025-06-04 13:51:18,273 | INFO     | job summary report
[2025-06-04 15:51:33] 2025-06-04 13:51:18,273 | INFO     | --------------------------------------------------
[2025-06-04 15:51:33] 2025-06-04 13:51:18,273 | INFO     | PanDA job id: 6679108752
[2025-06-04 15:51:33] 2025-06-04 13:51:18,273 | INFO     | task id: 45006595
[2025-06-04 15:51:33] 2025-06-04 13:51:18,274 | INFO     | errors: (none)
[2025-06-04 15:51:33] 2025-06-04 13:51:18,274 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 15:51:33] 2025-06-04 13:51:18,274 | INFO     | pilot state: finished 
[2025-06-04 15:51:33] 2025-06-04 13:51:18,274 | INFO     | transexitcode: 0
[2025-06-04 15:51:33] 2025-06-04 13:51:18,274 | INFO     | exeerrorcode: 0
[2025-06-04 15:51:33] 2025-06-04 13:51:18,274 | INFO     | exeerrordiag: 
[2025-06-04 15:51:33] 2025-06-04 13:51:18,274 | INFO     | exitcode: 0
[2025-06-04 15:51:33] 2025-06-04 13:51:18,274 | INFO     | exitmsg: OK
[2025-06-04 15:51:33] 2025-06-04 13:51:18,274 | INFO     | cpuconsumptiontime: 10167 s
[2025-06-04 15:51:33] 2025-06-04 13:51:18,274 | INFO     | nevents: 400
[2025-06-04 15:51:33] 2025-06-04 13:51:18,274 | INFO     | neventsw: 0
[2025-06-04 15:51:33] 2025-06-04 13:51:18,274 | INFO     | pid: 568840
[2025-06-04 15:51:33] 2025-06-04 13:51:18,274 | INFO     | pgrp: 568840
[2025-06-04 15:51:33] 2025-06-04 13:51:18,274 | INFO     | corecount: 4
[2025-06-04 15:51:33] 2025-06-04 13:51:18,274 | INFO     | event service: False
[2025-06-04 15:51:33] 2025-06-04 13:51:18,274 | INFO     | sizes: {0: 2397300, 6: 2397506, 10: 2397534, 2775: 2422743, 2777: 2431712, 2779: 2431768, 2784: 2432066}
[2025-06-04 15:51:33] 2025-06-04 13:51:18,274 | INFO     | --------------------------------------------------
[2025-06-04 15:51:33] 2025-06-04 13:51:18,274 | INFO     | 
[2025-06-04 15:51:33] 2025-06-04 13:51:18,274 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/2
[2025-06-04 15:51:33] 2025-06-04 13:51:18,296 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 15:51:33] 2025-06-04 13:51:18,296 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 15:51:33] 2025-06-04 13:51:18,296 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 15:51:33] 2025-06-04 13:51:18,296 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 15:51:33] 2025-06-04 13:51:18,296 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 15:51:33] 2025-06-04 13:51:18,296 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 15:51:33] 2025-06-04 13:51:18,296 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 15:51:33] 2025-06-04 13:51:18,296 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 15:51:33] 2025-06-04 13:51:18,296 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 15:51:33] 2025-06-04 13:51:18,296 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 15:51:33] 2025-06-04 13:51:18,296 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 15:51:33] 2025-06-04 13:51:18,296 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 15:51:33] 2025-06-04 13:51:18,296 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 15:51:33] 2025-06-04 13:51:18,296 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 15:51:33] 2025-06-04 13:51:18,296 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 15:51:33] 2025-06-04 13:51:18,296 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 15:51:33] 2025-06-04 13:51:18,296 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 15:51:33] 2025-06-04 13:51:18,296 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 15:51:33] 2025-06-04 13:51:18,296 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 15:51:33] 2025-06-04 13:51:18,296 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 15:51:33] 2025-06-04 13:51:18,297 | INFO     | job 6679108752 has completed (purged errors)
[2025-06-04 15:51:33] 2025-06-04 13:51:18,297 | INFO     | overall cleanup function is called
[2025-06-04 15:51:33] 2025-06-04 13:51:19,303 | INFO     | --- collectZombieJob: --- 10, [568840]
[2025-06-04 15:51:33] 2025-06-04 13:51:19,304 | INFO     | zombie collector waiting for pid 568840
[2025-06-04 15:51:33] 2025-06-04 13:51:19,304 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 15:51:33] 2025-06-04 13:51:19,304 | INFO     | collected zombie processes
[2025-06-04 15:51:33] 2025-06-04 13:51:19,304 | INFO     | will attempt to kill all subprocesses of pid=568840
[2025-06-04 15:51:33] 2025-06-04 13:51:19,409 | INFO     | process IDs to be killed: [568840] (in reverse order)
[2025-06-04 15:51:33] 2025-06-04 13:51:19,470 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 15:51:33] 2025-06-04 13:51:19,471 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 15:51:33] 2025-06-04 13:51:19,474 | INFO     | did not find any defunct processes belonging to 568840
[2025-06-04 15:51:33] 2025-06-04 13:51:19,478 | INFO     | did not find any defunct processes belonging to 568840
[2025-06-04 15:51:33] 2025-06-04 13:51:19,478 | INFO     | ready for new job
[2025-06-04 15:51:33] 2025-06-04 13:51:19,478 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 15:51:33] 2025-06-04 13:51:19,480 | INFO     | **************************************
[2025-06-04 15:51:33] 2025-06-04 13:51:19,480 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 15:51:33] 2025-06-04 13:51:19,480 | INFO     | **************************************
[2025-06-04 15:51:33] 2025-06-04 13:51:19,480 | INFO     | 
[2025-06-04 15:51:33] 2025-06-04 13:51:19,480 | INFO     | pilot is running in a VM
[2025-06-04 15:51:33] 2025-06-04 13:51:19,480 | INFO     | architecture information:
[2025-06-04 15:51:33] 2025-06-04 13:51:19,481 | INFO     | executing command: cat /etc/os-release
[2025-06-04 15:51:33] 2025-06-04 13:51:19,495 | INFO     | cat /etc/os-release:
[2025-06-04 15:51:33] NAME="CentOS Linux"
[2025-06-04 15:51:33] VERSION="7 (Core)"
[2025-06-04 15:51:33] ID="centos"
[2025-06-04 15:51:33] ID_LIKE="rhel fedora"
[2025-06-04 15:51:33] VERSION_ID="7"
[2025-06-04 15:51:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 15:51:33] ANSI_COLOR="0;31"
[2025-06-04 15:51:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 15:51:33] HOME_URL="https://www.centos.org/"
[2025-06-04 15:51:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 15:51:33] 
[2025-06-04 15:51:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 15:51:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 15:51:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 15:51:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 15:51:33] 
[2025-06-04 15:51:33] 2025-06-04 13:51:19,496 | INFO     | **************************************
[2025-06-04 15:51:33] 2025-06-04 13:51:20,000 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/2
[2025-06-04 15:51:33] 2025-06-04 13:51:20,013 | INFO     | sufficient remaining disk space (27542945792 B)
[2025-06-04 15:51:33] 2025-06-04 13:51:20,014 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 15:51:33] 2025-06-04 13:51:20,014 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 15:51:33] 2025-06-04 13:51:20,014 | INFO     | update_server=False
[2025-06-04 15:51:33] 2025-06-04 13:51:20,014 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 15:51:33] 2025-06-04 13:51:20,014 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:51:33] 2025-06-04 13:51:20,015 | INFO     | aborting loop
[2025-06-04 15:51:33] 2025-06-04 13:51:20,015 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 15:51:33] 2025-06-04 13:51:20,015 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 15:51:33] 2025-06-04 13:51:20,015 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 15:51:33] 2025-06-04 13:51:20,015 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 15:51:33] 2025-06-04 13:51:20,629 | INFO     | all payload control threads have been joined
[2025-06-04 15:51:33] 2025-06-04 13:51:20,708 | INFO     | all job control threads have been joined
[2025-06-04 15:51:33] 2025-06-04 13:51:20,957 | INFO     | all data control threads have been joined
[2025-06-04 15:51:33] 2025-06-04 13:51:21,020 | INFO     | [job] retrieve thread has finished
[2025-06-04 15:51:33] 2025-06-04 13:51:21,020 | INFO     | [job] job monitor thread has finished
[2025-06-04 15:51:33] 2025-06-04 13:51:21,065 | INFO     | [payload] validate_post thread has finished
[2025-06-04 15:51:33] 2025-06-04 13:51:21,163 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 15:51:33] 2025-06-04 13:51:21,635 | INFO     | [payload] control thread has finished
[2025-06-04 15:51:33] 2025-06-04 13:51:21,713 | INFO     | [job] control thread has finished
[2025-06-04 15:51:33] 2025-06-04 13:51:21,749 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 15:51:33] 2025-06-04 13:51:21,963 | INFO     | [data] control thread has finished
[2025-06-04 15:51:33] 2025-06-04 13:51:22,070 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 15:51:33] 2025-06-04 13:51:22,115 | INFO     | [payload] failed_post thread has finished
[2025-06-04 15:51:33] 2025-06-04 13:51:22,237 | INFO     | [data] copytool_in thread has finished
[2025-06-04 15:51:33] 2025-06-04 13:51:22,318 | INFO     | [job] validate thread has finished
[2025-06-04 15:51:33] 2025-06-04 13:51:22,358 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 15:51:33] 2025-06-04 13:51:22,392 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 15:51:33] 2025-06-04 13:51:22,951 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:51:33] 2025-06-04 13:51:23,063 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 15:51:33] 2025-06-04 13:51:23,170 | INFO     | [data] copytool_out thread has finished
[2025-06-04 15:51:33] 2025-06-04 13:51:23,957 | INFO     | [job] queue monitor thread has finished
[2025-06-04 15:51:33] 2025-06-04 13:51:27,070 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 15:51:33] 2025-06-04 13:51:27,931 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138178477954880)>', '<ExcThread(monitor, started 138177520056064)>']
[2025-06-04 15:51:33] 2025-06-04 13:51:28,059 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 15:51:33] 2025-06-04 13:51:28,059 | INFO     | [monitor] control thread has ended
[2025-06-04 15:51:33] 2025-06-04 13:51:32,936 | INFO     | all workflow threads have been joined
[2025-06-04 15:51:33] 2025-06-04 13:51:32,936 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 15:51:33] 2025-06-04 13:51:32,936 | INFO     | traces error code: 0
[2025-06-04 15:51:33] 2025-06-04 13:51:32,937 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 15:51:33] 2025-06-04 13:51:33,007 [wrapper] ==== pilot stdout END ====
[2025-06-04 15:51:33] 2025-06-04 13:51:33,012 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 15:51:33] 2025-06-04 13:51:33,017 [wrapper] pilotpid: 562164
[2025-06-04 15:51:33] 2025-06-04 13:51:33,021 [wrapper] Pilot exit status: 0
[2025-06-04 15:51:33] 2025-06-04 13:51:33,040 [wrapper] pandaids: 6679108752
[2025-06-04 15:51:33] 2025-06-04 13:51:33,084 [wrapper] cleanup supervisor_pilot  621326 562165
[2025-06-04 15:51:33] 2025-06-04 13:51:33,089 [wrapper] Test setup, not cleaning
[2025-06-04 15:51:33] 2025-06-04 13:51:33,095 [wrapper] apfmon messages muted
[2025-06-04 15:51:33] 2025-06-04 13:51:33,099 [wrapper] ==== wrapper stdout END ====
[2025-06-04 15:51:33] 2025-06-04 13:51:33,104 [wrapper] ==== wrapper stderr END ====
[2025-06-04 15:51:33]  *** Error codes and diagnostics ***
[2025-06-04 15:51:33]     "exeErrorCode": 0,
[2025-06-04 15:51:33]     "exeErrorDiag": "",
[2025-06-04 15:51:33]     "pilotErrorCode": 0,
[2025-06-04 15:51:33]     "pilotErrorDiag": "",
[2025-06-04 15:51:33]  *** Listing of results directory ***
[2025-06-04 15:51:33] insgesamt 392584
[2025-06-04 15:51:33] -rw-r--r-- 1 yeti boinc    495897 Jun  4 10:46 pilot3.tar.gz
[2025-06-04 15:51:33] -rw-r--r-- 1 yeti boinc      5111 Jun  4 10:48 queuedata.json
[2025-06-04 15:51:33] -rwx------ 1 yeti boinc     37140 Jun  4 10:48 runpilot2-wrapper.sh
[2025-06-04 15:51:33] -rw-r--r-- 1 yeti boinc       100 Jun  4 15:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 15:51:33] -rwxr-xr-x 1 yeti boinc      7986 Jun  4 15:04 run_atlas
[2025-06-04 15:51:33] -rw-r--r-- 1 yeti boinc       105 Jun  4 15:04 job.xml
[2025-06-04 15:51:33] -rw-r--r-- 1 yeti boinc      6766 Jun  4 15:04 init_data.xml
[2025-06-04 15:51:33] -rw-r--r-- 2 yeti boinc 213410802 Jun  4 15:04 EVNT.45006593._000114.pool.root.1
[2025-06-04 15:51:33] -rw-r--r-- 2 yeti boinc     15093 Jun  4 15:04 start_atlas.sh
[2025-06-04 15:51:33] drwxrwx--x 2 yeti boinc      4096 Jun  4 15:04 shared
[2025-06-04 15:51:33] -rw-r--r-- 2 yeti boinc    508883 Jun  4 15:04 input.tar.gz
[2025-06-04 15:51:33] -rw-r--r-- 1 yeti boinc         0 Jun  4 15:04 boinc_lockfile
[2025-06-04 15:51:33] -rw-r--r-- 1 yeti boinc      2522 Jun  4 15:04 pandaJob.out
[2025-06-04 15:51:33] -rw------- 1 yeti boinc    986811 Jun  4 15:04 agis_schedconf.cvmfs.json
[2025-06-04 15:51:33] -rw------- 1 yeti boinc   1598969 Jun  4 15:04 agis_ddmendpoints.agis.ALL.json
[2025-06-04 15:51:33] drwx------ 4 yeti boinc      4096 Jun  4 15:04 pilot3
[2025-06-04 15:51:33] -rw------- 1 yeti boinc 183691318 Jun  4 15:50 HITS.45006595._055860.pool.root.1
[2025-06-04 15:51:33] -rw-r--r-- 1 yeti boinc       529 Jun  4 15:50 boinc_task_state.xml
[2025-06-04 15:51:33] -rw------- 1 yeti boinc        95 Jun  4 15:51 pilot_heartbeat.json
[2025-06-04 15:51:33] -rw------- 1 yeti boinc      1021 Jun  4 15:51 memory_monitor_summary.json
[2025-06-04 15:51:33] -rw------- 1 yeti boinc    231182 Jun  4 15:51 log.45006595._055860.job.log.tgz.1
[2025-06-04 15:51:33] -rw------- 1 yeti boinc      7659 Jun  4 15:51 heartbeat.json
[2025-06-04 15:51:33] -rw-r--r-- 1 yeti boinc      8192 Jun  4 15:51 boinc_mmap_file
[2025-06-04 15:51:33] -rw-r--r-- 1 yeti boinc        27 Jun  4 15:51 wrapper_checkpoint.txt
[2025-06-04 15:51:33] -rw------- 1 yeti boinc      4552 Jun  4 15:51 pilotlog.txt
[2025-06-04 15:51:33] -rw------- 1 yeti boinc    305843 Jun  4 15:51 log.45006595._055860.job.log.1
[2025-06-04 15:51:33] -rw------- 1 yeti boinc       357 Jun  4 15:51 output.list
[2025-06-04 15:51:33] -rw-r--r-- 1 yeti boinc       620 Jun  4 15:51 runtime_log
[2025-06-04 15:51:33] -rw------- 1 yeti boinc    552960 Jun  4 15:51 result.tar.gz
[2025-06-04 15:51:33] -rw------- 1 yeti boinc       640 Jun  4 15:51 VeKNDm3yyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUpnKDm8xhFbn.diag
[2025-06-04 15:51:33] -rw-r--r-- 1 yeti boinc      8843 Jun  4 15:51 runtime_log.err
[2025-06-04 15:51:33] -rw-r--r-- 1 yeti boinc     21172 Jun  4 15:51 stderr.txt
[2025-06-04 15:51:33] HITS file was successfully produced:
[2025-06-04 15:51:33] -rw------- 1 yeti boinc 183691318 Jun  4 15:50 shared/HITS.pool.root.1
[2025-06-04 15:51:33]  *** Contents of shared directory: ***
[2025-06-04 15:51:33] insgesamt 388864
[2025-06-04 15:51:33] -rw-r--r-- 2 yeti boinc 213410802 Jun  4 15:04 ATLAS.root_0
[2025-06-04 15:51:33] -rw-r--r-- 2 yeti boinc     15093 Jun  4 15:04 start_atlas.sh
[2025-06-04 15:51:33] -rw-r--r-- 2 yeti boinc    508883 Jun  4 15:04 input.tar.gz
[2025-06-04 15:51:33] -rw------- 1 yeti boinc 183691318 Jun  4 15:50 HITS.pool.root.1
[2025-06-04 15:51:33] -rw------- 1 yeti boinc    552960 Jun  4 15:51 result.tar.gz
15:51:34 (558427): run_atlas exited; CPU time 10237.742598
15:51:34 (558427): called boinc_finish(0)

</stderr_txt>
]]>

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