Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:32:38 (22304): wrapper (7.7.26015): starting
02:32:38 (22304): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 02:32:38] Arguments: --nthreads 8
[2025-06-05 02:32:38] Threads: 8
[2025-06-05 02:32:38] Checking for CVMFS
[2025-06-05 02:32:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 02:32:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 02:32:39] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 02:32:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 02:32:40] 2.11.2.0 20313 34114 93544 146799 3 158 12742571 25165824 2409 130560 0 18048753 99.789 20616758 5157 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 02:32:40] CVMFS is ok
[2025-06-05 02:32:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 02:32:40] Checking for apptainer binary...
[2025-06-05 02:32:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 02:32:40] Running /usr/bin/apptainer --version
[2025-06-05 02:32:40] apptainer version 1.3.2-1.el7
[2025-06-05 02:32:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 02:32:42] cg-vwn236.simple-grid.lan
[2025-06-05 02:32:42] apptainer works
[2025-06-05 02:32:42] Set ATHENA_PROC_NUMBER=8
[2025-06-05 02:32:42] Set ATHENA_CORE_NUMBER=8
[2025-06-05 02:32:42] Starting ATLAS job with PandaID=6679235722
[2025-06-05 02:32:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 06:41:12]  *** The last 200 lines of the pilot log: ***
[2025-06-05 06:41:12] 2025-06-05 04:16:53,634 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 06:41:12] 2025-06-05 04:16:53,634 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 06:41:12] 2025-06-05 04:16:53,634 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 06:41:12] 2025-06-05 04:16:53,634 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 06:41:12] 2025-06-05 04:16:53,639 | INFO     | fitting pss+swap vs Time
[2025-06-05 06:41:12] 2025-06-05 04:16:53,640 | INFO     | sum of square deviations: 3212467674.5
[2025-06-05 06:41:12] 2025-06-05 04:16:53,641 | INFO     | sum of deviations: -25401173480.0
[2025-06-05 06:41:12] 2025-06-05 04:16:53,642 | INFO     | mean x: 1749090271.5
[2025-06-05 06:41:12] 2025-06-05 04:16:53,642 | INFO     | mean y: 2496829.4862385322
[2025-06-05 06:41:12] 2025-06-05 04:16:53,642 | INFO     | -- intersect: 13832657914.44311
[2025-06-05 06:41:12] 2025-06-05 04:16:53,642 | INFO     | intersect: 13832657914.44311
[2025-06-05 06:41:12] 2025-06-05 04:16:53,642 | INFO     | chi2: 2.4786810638355457
[2025-06-05 06:41:12] 2025-06-05 04:16:53,651 | INFO     | sum of square deviations: 2996454322.0
[2025-06-05 06:41:12] 2025-06-05 04:16:53,653 | INFO     | sum of deviations: -10389108432.999996
[2025-06-05 06:41:12] 2025-06-05 04:16:53,653 | INFO     | mean x: 1749090119.0
[2025-06-05 06:41:12] 2025-06-05 04:16:53,654 | INFO     | mean y: 2507239.4976525824
[2025-06-05 06:41:12] 2025-06-05 04:16:53,654 | INFO     | -- intersect: 6066836928.078124
[2025-06-05 06:41:12] 2025-06-05 04:16:53,654 | INFO     | intersect: 6066836928.078124
[2025-06-05 06:41:12] 2025-06-05 04:16:53,654 | INFO     | chi2: 1.7114843395727195
[2025-06-05 06:41:12] 2025-06-05 04:16:53,654 | INFO     | current chi2=1.7114843395727195 (change=30.951812859523574 %)
[2025-06-05 06:41:12] 2025-06-05 04:16:53,655 | INFO     | sum of square deviations: 2790348132.0
[2025-06-05 06:41:12] 2025-06-05 04:16:53,656 | INFO     | sum of deviations: -9926524510.000004
[2025-06-05 06:41:12] 2025-06-05 04:16:53,656 | INFO     | mean x: 1749089966.5
[2025-06-05 06:41:12] 2025-06-05 04:16:53,657 | INFO     | mean y: 2507581.221153846
[2025-06-05 06:41:12] 2025-06-05 04:16:53,657 | INFO     | -- intersect: 6224808025.937612
[2025-06-05 06:41:12] 2025-06-05 04:16:53,657 | INFO     | intersect: 6224808025.937612
[2025-06-05 06:41:12] 2025-06-05 04:16:53,657 | INFO     | chi2: 1.7109345263715003
[2025-06-05 06:41:12] 2025-06-05 04:16:53,657 | INFO     | current chi2=1.7109345263715003 (change=0.03212493322354478 %)
[2025-06-05 06:41:12] 2025-06-05 04:16:53,657 | INFO     | right removable region: 207
[2025-06-05 06:41:12] 2025-06-05 04:16:53,658 | INFO     | sum of square deviations: 2996454322.0
[2025-06-05 06:41:12] 2025-06-05 04:16:53,659 | INFO     | sum of deviations: -59639534507.0
[2025-06-05 06:41:12] 2025-06-05 04:16:53,660 | INFO     | mean x: 1749090424.0
[2025-06-05 06:41:12] 2025-06-05 04:16:53,660 | INFO     | mean y: 2520772.6948356805
[2025-06-05 06:41:12] 2025-06-05 04:16:53,660 | INFO     | -- intersect: 34815311988.008835
[2025-06-05 06:41:12] 2025-06-05 04:16:53,660 | INFO     | intersect: 34815311988.008835
[2025-06-05 06:41:12] 2025-06-05 04:16:53,660 | INFO     | chi2: 1.0009888038253572
[2025-06-05 06:41:12] 2025-06-05 04:16:53,660 | INFO     | current chi2=1.0009888038253572 (change=59.61607088423013 %)
[2025-06-05 06:41:12] 2025-06-05 04:16:53,661 | INFO     | sum of square deviations: 2790348132.0
[2025-06-05 06:41:12] 2025-06-05 04:16:53,662 | INFO     | sum of deviations: -58193705766.5
[2025-06-05 06:41:12] 2025-06-05 04:16:53,662 | INFO     | mean x: 1749090576.5
[2025-06-05 06:41:12] 2025-06-05 04:16:53,663 | INFO     | mean y: 2519665.091346154
[2025-06-05 06:41:12] 2025-06-05 04:16:53,663 | INFO     | -- intersect: 36480427636.68307
[2025-06-05 06:41:12] 2025-06-05 04:16:53,663 | INFO     | intersect: 36480427636.68307
[2025-06-05 06:41:12] 2025-06-05 04:16:53,663 | INFO     | chi2: 0.9866466007174375
[2025-06-05 06:41:12] 2025-06-05 04:16:53,663 | INFO     | current chi2=0.9866466007174375 (change=1.4328035491615707 %)
[2025-06-05 06:41:12] 2025-06-05 04:16:53,663 | INFO     | left removable region: 20
[2025-06-05 06:41:12] 2025-06-05 04:16:53,664 | INFO     | sum of square deviations: 2027639878.0
[2025-06-05 06:41:12] 2025-06-05 04:16:53,665 | INFO     | sum of deviations: -29546741714.999992
[2025-06-05 06:41:12] 2025-06-05 04:16:53,665 | INFO     | mean x: 1749090546.0
[2025-06-05 06:41:12] 2025-06-05 04:16:53,665 | INFO     | mean y: 2521430.2887700535
[2025-06-05 06:41:12] 2025-06-05 04:16:53,665 | INFO     | -- intersect: 25490245931.83377
[2025-06-05 06:41:12] 2025-06-05 04:16:53,666 | INFO     | intersect: 25490245931.83377
[2025-06-05 06:41:12] 2025-06-05 04:16:53,674 | INFO     | chi2: 0.1720921313724776
[2025-06-05 06:41:12] 2025-06-05 04:16:53,675 | INFO     | -- intersect: 25490245931.83377
[2025-06-05 06:41:12] 2025-06-05 04:16:53,675 | INFO     | current memory leak: -14.57 B/s (using 187 data points, chi2=0.17)
[2025-06-05 06:41:12] 2025-06-05 04:16:53,676 | INFO     | ..............................
[2025-06-05 06:41:12] 2025-06-05 04:16:53,676 | INFO     | . Timing measurements:
[2025-06-05 06:41:12] 2025-06-05 04:16:53,676 | INFO     | . get job = 0 s
[2025-06-05 06:41:12] 2025-06-05 04:16:53,676 | INFO     | . initial setup = 2 s
[2025-06-05 06:41:12] 2025-06-05 04:16:53,676 | INFO     | . payload setup = 15 s
[2025-06-05 06:41:12] 2025-06-05 04:16:53,676 | INFO     | . stage-in = 0 s
[2025-06-05 06:41:12] 2025-06-05 04:16:53,676 | INFO     | . payload execution = 13284 s
[2025-06-05 06:41:12] 2025-06-05 04:16:53,676 | INFO     | . stage-out = 6 s
[2025-06-05 06:41:12] 2025-06-05 04:16:53,676 | INFO     | . log creation = 1 s
[2025-06-05 06:41:12] 2025-06-05 04:16:53,676 | INFO     | ..............................
[2025-06-05 06:41:12] 2025-06-05 04:16:53,958 | INFO     | 
[2025-06-05 06:41:12] 2025-06-05 04:16:53,958 | INFO     | job summary report
[2025-06-05 06:41:12] 2025-06-05 04:16:53,958 | INFO     | --------------------------------------------------
[2025-06-05 06:41:12] 2025-06-05 04:16:53,959 | INFO     | PanDA job id: 6679235722
[2025-06-05 06:41:12] 2025-06-05 04:16:53,959 | INFO     | task id: 45006595
[2025-06-05 06:41:12] 2025-06-05 04:16:53,959 | INFO     | errors: (none)
[2025-06-05 06:41:12] 2025-06-05 04:16:53,959 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 06:41:12] 2025-06-05 04:16:53,959 | INFO     | pilot state: finished 
[2025-06-05 06:41:12] 2025-06-05 04:16:53,959 | INFO     | transexitcode: 0
[2025-06-05 06:41:12] 2025-06-05 04:16:53,959 | INFO     | exeerrorcode: 0
[2025-06-05 06:41:12] 2025-06-05 04:16:53,959 | INFO     | exeerrordiag: 
[2025-06-05 06:41:12] 2025-06-05 04:16:53,959 | INFO     | exitcode: 0
[2025-06-05 06:41:12] 2025-06-05 04:16:53,959 | INFO     | exitmsg: OK
[2025-06-05 06:41:12] 2025-06-05 04:16:53,959 | INFO     | cpuconsumptiontime: 50531 s
[2025-06-05 06:41:12] 2025-06-05 04:16:53,960 | INFO     | nevents: 400
[2025-06-05 06:41:12] 2025-06-05 04:16:53,960 | INFO     | neventsw: 0
[2025-06-05 06:41:12] 2025-06-05 04:16:53,960 | INFO     | pid: 2163
[2025-06-05 06:41:12] 2025-06-05 04:16:53,960 | INFO     | pgrp: 2163
[2025-06-05 06:41:12] 2025-06-05 04:16:53,960 | INFO     | corecount: 8
[2025-06-05 06:41:12] 2025-06-05 04:16:53,960 | INFO     | event service: False
[2025-06-05 06:41:12] 2025-06-05 04:16:53,960 | INFO     | sizes: {0: 2397122, 1: 2397321, 11: 2397527, 12: 2397555, 13303: 2427166, 13310: 2436109, 13313: 2436293, 13402: 2436463}
[2025-06-05 06:41:12] 2025-06-05 04:16:53,960 | INFO     | --------------------------------------------------
[2025-06-05 06:41:12] 2025-06-05 04:16:53,960 | INFO     | 
[2025-06-05 06:41:12] 2025-06-05 04:16:53,961 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2025-06-05 06:41:12] 2025-06-05 04:16:54,082 | INFO     | PID=26002 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 06:41:12] 2025-06-05 04:16:54,082 | INFO     | .. there are 9 such processes running
[2025-06-05 06:41:12] 2025-06-05 04:16:54,596 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 06:41:12] 2025-06-05 04:16:54,597 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 06:41:12] 2025-06-05 04:16:54,597 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 06:41:12] 2025-06-05 04:16:54,597 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 06:41:12] 2025-06-05 04:16:54,597 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 06:41:12] 2025-06-05 04:16:54,597 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 06:41:12] 2025-06-05 04:16:54,597 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 06:41:12] 2025-06-05 04:16:54,597 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 06:41:12] 2025-06-05 04:16:54,597 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 06:41:12] 2025-06-05 04:16:54,597 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 06:41:12] 2025-06-05 04:16:54,598 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 06:41:12] 2025-06-05 04:16:54,598 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 06:41:12] 2025-06-05 04:16:54,598 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 06:41:12] 2025-06-05 04:16:54,598 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 06:41:12] 2025-06-05 04:16:54,598 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 06:41:12] 2025-06-05 04:16:54,598 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 06:41:12] 2025-06-05 04:16:54,598 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 06:41:12] 2025-06-05 04:16:54,598 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 06:41:12] 2025-06-05 04:16:54,598 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 06:41:12] 2025-06-05 04:16:54,598 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 06:41:12] 2025-06-05 04:16:54,599 | INFO     | job 6679235722 has completed (purged errors)
[2025-06-05 06:41:12] 2025-06-05 04:16:54,599 | INFO     | overall cleanup function is called
[2025-06-05 06:41:12] 2025-06-05 04:16:55,611 | INFO     | --- collectZombieJob: --- 10, [2163]
[2025-06-05 06:41:12] 2025-06-05 04:16:55,611 | INFO     | zombie collector waiting for pid 2163
[2025-06-05 06:41:12] 2025-06-05 04:16:55,611 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 06:41:12] 2025-06-05 04:16:55,611 | INFO     | collected zombie processes
[2025-06-05 06:41:12] 2025-06-05 04:16:55,612 | INFO     | will attempt to kill all subprocesses of pid=2163
[2025-06-05 06:41:12] 2025-06-05 04:16:55,722 | INFO     | process IDs to be killed: [2163] (in reverse order)
[2025-06-05 06:41:12] 2025-06-05 04:16:56,499 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 06:41:12] 2025-06-05 04:16:56,499 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 06:41:12] 2025-06-05 04:16:56,503 | INFO     | did not find any defunct processes belonging to 2163
[2025-06-05 06:41:12] 2025-06-05 04:16:56,507 | INFO     | did not find any defunct processes belonging to 2163
[2025-06-05 06:41:12] 2025-06-05 04:16:56,507 | INFO     | ready for new job
[2025-06-05 06:41:12] 2025-06-05 04:16:56,508 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 06:41:12] 2025-06-05 04:16:56,510 | INFO     | **************************************
[2025-06-05 06:41:12] 2025-06-05 04:16:56,510 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 06:41:12] 2025-06-05 04:16:56,510 | INFO     | **************************************
[2025-06-05 06:41:12] 2025-06-05 04:16:56,510 | INFO     | 
[2025-06-05 06:41:12] 2025-06-05 04:16:56,511 | INFO     | pilot is running in a VM
[2025-06-05 06:41:12] 2025-06-05 04:16:56,511 | INFO     | architecture information:
[2025-06-05 06:41:12] 2025-06-05 04:16:56,515 | INFO     | executing command: cat /etc/os-release
[2025-06-05 06:41:12] 2025-06-05 04:16:56,651 | INFO     | cat /etc/os-release:
[2025-06-05 06:41:12] NAME="CentOS Linux"
[2025-06-05 06:41:12] VERSION="7 (Core)"
[2025-06-05 06:41:12] ID="centos"
[2025-06-05 06:41:12] ID_LIKE="rhel fedora"
[2025-06-05 06:41:12] VERSION_ID="7"
[2025-06-05 06:41:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 06:41:12] ANSI_COLOR="0;31"
[2025-06-05 06:41:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 06:41:12] HOME_URL="https://www.centos.org/"
[2025-06-05 06:41:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 06:41:12] 
[2025-06-05 06:41:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 06:41:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 06:41:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 06:41:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 06:41:12] 
[2025-06-05 06:41:12] 2025-06-05 04:16:56,651 | INFO     | **************************************
[2025-06-05 06:41:12] 2025-06-05 04:16:57,155 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2025-06-05 06:41:12] 2025-06-05 04:16:57,271 | INFO     | sufficient remaining disk space (497345888256 B)
[2025-06-05 06:41:12] 2025-06-05 04:16:57,271 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 06:41:12] 2025-06-05 04:16:57,271 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 06:41:12] 2025-06-05 04:16:57,271 | INFO     | update_server=False
[2025-06-05 06:41:12] 2025-06-05 04:16:57,271 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 06:41:12] 2025-06-05 04:16:57,272 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 06:41:12] 2025-06-05 04:16:57,350 | INFO     | all job control threads have been joined
[2025-06-05 06:41:12] 2025-06-05 04:16:57,430 | INFO     | all data control threads have been joined
[2025-06-05 06:41:12] 2025-06-05 04:16:57,580 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:41:12] 2025-06-05 04:16:57,580 | INFO     | aborting loop
[2025-06-05 06:41:12] 2025-06-05 04:16:58,101 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 06:41:12] 2025-06-05 04:16:58,101 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 06:41:12] 2025-06-05 04:16:58,102 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 06:41:12] 2025-06-05 04:16:58,197 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 06:41:12] 2025-06-05 04:16:58,277 | INFO     | [job] retrieve thread has finished
[2025-06-05 06:41:12] 2025-06-05 04:16:58,356 | INFO     | [job] control thread has finished
[2025-06-05 06:41:12] 2025-06-05 04:16:58,436 | INFO     | [data] control thread has finished
[2025-06-05 06:41:12] 2025-06-05 04:16:58,458 | INFO     | all payload control threads have been joined
[2025-06-05 06:41:12] 2025-06-05 04:16:58,496 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 06:41:12] 2025-06-05 04:16:58,564 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 06:41:12] 2025-06-05 04:16:58,586 | INFO     | [job] job monitor thread has finished
[2025-06-05 06:41:12] 2025-06-05 04:16:58,757 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 06:41:12] 2025-06-05 04:16:58,965 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:41:12] 2025-06-05 04:16:59,071 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 06:41:12] 2025-06-05 04:16:59,217 | INFO     | [payload] validate_post thread has finished
[2025-06-05 06:41:12] 2025-06-05 04:16:59,316 | INFO     | [data] copytool_in thread has finished
[2025-06-05 06:41:12] 2025-06-05 04:16:59,416 | INFO     | [job] validate thread has finished
[2025-06-05 06:41:12] 2025-06-05 04:16:59,464 | INFO     | [payload] control thread has finished
[2025-06-05 06:41:12] 2025-06-05 04:16:59,643 | INFO     | [payload] failed_post thread has finished
[2025-06-05 06:41:12] 2025-06-05 04:16:59,971 | INFO     | [job] queue monitor thread has finished
[2025-06-05 06:41:12] 2025-06-05 04:17:00,204 | INFO     | [data] copytool_out thread has finished
[2025-06-05 06:41:12] 2025-06-05 04:17:01,281 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 06:41:12] 2025-06-05 04:17:01,472 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139976718440256)>', '<ExcThread(monitor, started 139976423479040)>']
[2025-06-05 06:41:12] 2025-06-05 04:17:02,126 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 06:41:12] 2025-06-05 04:17:02,126 | INFO     | [monitor] control thread has ended
[2025-06-05 06:41:12] 2025-06-05 04:17:06,498 | INFO     | all workflow threads have been joined
[2025-06-05 06:41:12] 2025-06-05 04:17:06,498 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 06:41:12] 2025-06-05 04:17:06,499 | INFO     | traces error code: 0
[2025-06-05 06:41:12] 2025-06-05 04:17:06,499 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 06:41:12] 2025-06-05 04:17:06,970 [wrapper] ==== pilot stdout END ====
[2025-06-05 06:41:12] 2025-06-05 04:17:07,069 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 06:41:12] 2025-06-05 04:17:07,167 [wrapper] pilotpid: 26002
[2025-06-05 06:41:12] 2025-06-05 04:17:07,253 [wrapper] Pilot exit status: 0
[2025-06-05 06:41:12] 2025-06-05 04:17:07,730 [wrapper] pandaids: 6679235722
[2025-06-05 06:41:12] 2025-06-05 04:17:08,480 [wrapper] cleanup supervisor_pilot 23188 26003
[2025-06-05 06:41:12] 2025-06-05 04:17:08,515 [wrapper] Test setup, not cleaning
[2025-06-05 06:41:12] 2025-06-05 04:17:08,525 [wrapper] apfmon messages muted
[2025-06-05 06:41:12] 2025-06-05 04:17:08,534 [wrapper] ==== wrapper stdout END ====
[2025-06-05 06:41:12] 2025-06-05 04:17:08,544 [wrapper] ==== wrapper stderr END ====
[2025-06-05 06:41:12]  *** Error codes and diagnostics ***
[2025-06-05 06:41:12]     "exeErrorCode": 0,
[2025-06-05 06:41:12]     "exeErrorDiag": "",
[2025-06-05 06:41:12]     "pilotErrorCode": 0,
[2025-06-05 06:41:12]     "pilotErrorDiag": "",
[2025-06-05 06:41:12]  *** Listing of results directory ***
[2025-06-05 06:41:12] total 393932
[2025-06-05 06:41:12] -rw-r--r--. 1 boinc boinc    495897 Jun  4 10:46 pilot3.tar.gz
[2025-06-05 06:41:12] -rwx------. 1 boinc boinc     37140 Jun  4 10:56 runpilot2-wrapper.sh
[2025-06-05 06:41:12] -rw-r--r--. 1 boinc boinc      5111 Jun  4 10:56 queuedata.json
[2025-06-05 06:41:12] -rw-r--r--. 1 boinc boinc       100 Jun  5 02:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 06:41:12] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 02:32 run_atlas
[2025-06-05 06:41:12] -rw-r--r--. 1 boinc boinc       105 Jun  5 02:32 job.xml
[2025-06-05 06:41:12] -rw-r--r--. 1 boinc boinc      6392 Jun  5 02:32 init_data.xml
[2025-06-05 06:41:12] -rw-r--r--. 2 boinc boinc 216338965 Jun  5 02:32 EVNT.45006593._001076.pool.root.1
[2025-06-05 06:41:12] -rw-r--r--. 2 boinc boinc     15093 Jun  5 02:32 start_atlas.sh
[2025-06-05 06:41:12] drwxrwx--x. 2 boinc boinc        68 Jun  5 02:32 shared
[2025-06-05 06:41:12] -rw-r--r--. 2 boinc boinc    508881 Jun  5 02:32 input.tar.gz
[2025-06-05 06:41:12] -rw-r--r--. 1 boinc boinc         0 Jun  5 02:32 boinc_lockfile
[2025-06-05 06:41:12] -rw-r--r--. 1 boinc boinc      2525 Jun  5 02:32 pandaJob.out
[2025-06-05 06:41:12] -rw-------. 1 boinc boinc    987117 Jun  5 02:33 agis_schedconf.cvmfs.json
[2025-06-05 06:41:12] drwx------. 4 boinc boinc      4096 Jun  5 02:33 pilot3
[2025-06-05 06:41:12] -rw-------. 1 boinc boinc 180155689 Jun  5 06:14 HITS.45006595._056044.pool.root.1
[2025-06-05 06:41:12] -rw-r--r--. 1 boinc boinc       531 Jun  5 06:14 boinc_task_state.xml
[2025-06-05 06:41:12] -rw-------. 1 boinc boinc      1032 Jun  5 06:15 memory_monitor_summary.json
[2025-06-05 06:41:12] -rw-------. 1 boinc boinc   1598969 Jun  5 06:15 agis_ddmendpoints.agis.ALL.json
[2025-06-05 06:41:12] -rw-------. 1 boinc boinc    369841 Jun  5 06:15 log.45006595._056044.job.log.tgz.1
[2025-06-05 06:41:12] -rw-------. 1 boinc boinc        95 Jun  5 06:16 pilot_heartbeat.json
[2025-06-05 06:41:12] -rw-------. 1 boinc boinc      7688 Jun  5 06:16 heartbeat.json
[2025-06-05 06:41:12] -rw-------. 1 boinc boinc      4417 Jun  5 06:17 pilotlog.txt
[2025-06-05 06:41:12] -rw-------. 1 boinc boinc   1163469 Jun  5 06:17 log.45006595._056044.job.log.1
[2025-06-05 06:41:12] -rw-------. 1 boinc boinc       357 Jun  5 06:17 output.list
[2025-06-05 06:41:12] -rw-r--r--. 1 boinc boinc       620 Jun  5 06:17 runtime_log
[2025-06-05 06:41:12] -rw-------. 1 boinc boinc   1556480 Jun  5 06:17 result.tar.gz
[2025-06-05 06:41:12] -rw-r--r--. 1 boinc boinc      8673 Jun  5 06:17 runtime_log.err
[2025-06-05 06:41:12] -rw-------. 1 boinc boinc       657 Jun  5 06:17 cG4LDm45yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWrnKDmzwbMVn.diag
[2025-06-05 06:41:12] -rw-r--r--. 1 boinc boinc      8192 Jun  5 06:41 boinc_mmap_file
[2025-06-05 06:41:12] -rw-r--r--. 1 boinc boinc        28 Jun  5 06:41 wrapper_checkpoint.txt
[2025-06-05 06:41:12] -rw-r--r--. 1 boinc boinc     20539 Jun  5 06:41 stderr.txt
[2025-06-05 06:41:12] HITS file was successfully produced:
[2025-06-05 06:41:12] -rw-------. 1 boinc boinc 180155689 Jun  5 06:14 shared/HITS.pool.root.1
[2025-06-05 06:41:12]  *** Contents of shared directory: ***
[2025-06-05 06:41:12] total 389244
[2025-06-05 06:41:12] -rw-r--r--. 2 boinc boinc 216338965 Jun  5 02:32 ATLAS.root_0
[2025-06-05 06:41:12] -rw-r--r--. 2 boinc boinc     15093 Jun  5 02:32 start_atlas.sh
[2025-06-05 06:41:12] -rw-r--r--. 2 boinc boinc    508881 Jun  5 02:32 input.tar.gz
[2025-06-05 06:41:12] -rw-------. 1 boinc boinc 180155689 Jun  5 06:14 HITS.pool.root.1
[2025-06-05 06:41:12] -rw-------. 1 boinc boinc   1556480 Jun  5 06:17 result.tar.gz
06:41:14 (22304): run_atlas exited; CPU time 50699.264693
06:41:14 (22304): called boinc_finish(0)

</stderr_txt>
]]>

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