Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:49:11 (11788): wrapper (7.7.26015): starting
08:49:11 (11788): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 08:49:11] Arguments: --nthreads 12
[2025-06-04 08:49:11] Threads: 12
[2025-06-04 08:49:11] Checking for CVMFS
[2025-06-04 08:49:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:49:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:49:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:49:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:49:11] 2.11.2.0 28623 28327 84580 146780 2 58 18591135 20275201 1 130560 0 14235280 99.983 5326867 6613 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 08:49:11] CVMFS is ok
[2025-06-04 08:49:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:49:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:49:11] Further information can be found at the LHC@home message board.
[2025-06-04 08:49:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:49:11] Checking for apptainer binary...
[2025-06-04 08:49:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:49:11] Running /usr/bin/apptainer --version
[2025-06-04 08:49:11] apptainer version 1.3.2-1.el7
[2025-06-04 08:49:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:49:12] c-205-20.aglt2.org
[2025-06-04 08:49:12] apptainer works
[2025-06-04 08:49:12] Set ATHENA_PROC_NUMBER=12
[2025-06-04 08:49:12] Set ATHENA_CORE_NUMBER=12
[2025-06-04 08:49:12] Starting ATLAS job with PandaID=6679405244
[2025-06-04 08:49:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:24:41]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:24:41]  filetype=log
[2025-06-04 10:24:41]  guid=739101f0-324d-4b43-a345-ef774245353a
[2025-06-04 10:24:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 10:24:41]  is_altstaged=None
[2025-06-04 10:24:41]  is_tar=False
[2025-06-04 10:24:41]  lfn=log.44871837._102178.job.log.tgz.1
[2025-06-04 10:24:41]  mtime=0
[2025-06-04 10:24:41]  protocol_id=None
[2025-06-04 10:24:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:24:41]  replicas=None
[2025-06-04 10:24:41]  scope=mc23_13p6TeV
[2025-06-04 10:24:41]  status=None
[2025-06-04 10:24:41]  status_code=0
[2025-06-04 10:24:41]  storage_token=
[2025-06-04 10:24:41]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679405244/log.44871837._102178.job.log.tgz.1
[2025-06-04 10:24:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b4/c5/log.44871837._102178.job.log.tgz.1
[2025-06-04 10:24:41]  workdir=None
[2025-06-04 10:24:41] ]
[2025-06-04 10:24:41] 2025-06-04 14:24:20,672 | INFO     | transferring file log.44871837._102178.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679405244/log.44871837._102178.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:24:41] 2025-06-04 14:24:20,672 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679405244/log.44871837._102178.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._102178.job
[2025-06-04 10:24:41] 2025-06-04 14:24:20,694 | INFO     | adding to output.list: log.44871837._102178.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b4/c5/log.44871837._102178.job.log.tg
[2025-06-04 10:24:41] 2025-06-04 14:24:20,695 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:24:41] 2025-06-04 14:24:20,695 | INFO     | summary of transferred files:
[2025-06-04 10:24:41] 2025-06-04 14:24:20,695 | INFO     |  -- lfn=log.44871837._102178.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:24:41] 2025-06-04 14:24:20,696 | INFO     | stage-out finished correctly
[2025-06-04 10:24:41] 2025-06-04 14:24:24,182 | WARNING  | process 21795 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 10:24:41] 2025-06-04 14:24:24,182 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679405244/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:24:41] 2025-06-04 14:24:24,260 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:24:41] 2025-06-04 14:24:24,347 | INFO     | job 6679405244 has state=finished
[2025-06-04 10:24:41] 2025-06-04 14:24:24,347 | INFO     | preparing for final server update for job 6679405244 in state='finished'
[2025-06-04 10:24:41] 2025-06-04 14:24:24,348 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:24:41] 2025-06-04 14:24:24,348 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:24:41] 2025-06-04 14:24:24,349 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:24:41] 2025-06-04 14:24:24,349 | INFO     | job 6679405244 has finished - writing final server update
[2025-06-04 10:24:41] 2025-06-04 14:24:24,349 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:24:41] 2025-06-04 14:24:24,351 | INFO     | executing command: lscpu
[2025-06-04 10:24:41] 2025-06-04 14:24:24,363 | INFO     | number of running child processes to parent process 21795: 1
[2025-06-04 10:24:41] 2025-06-04 14:24:24,364 | INFO     | maximum number of monitored processes: 6
[2025-06-04 10:24:41] 2025-06-04 14:24:24,380 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:24:41] 2025-06-04 14:24:26,867 | INFO     | monitor loop #424: job 0:6679405244 is in state 'finished'
[2025-06-04 10:24:41] 2025-06-04 14:24:26,867 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:24:41] 2025-06-04 14:24:29,018 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 10:24:41] 2025-06-04 14:24:29,018 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679405244/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:24:41] 2025-06-04 14:24:29,019 | INFO     | extracted standard info from prmon json
[2025-06-04 10:24:41] 2025-06-04 14:24:29,019 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:24:41] 2025-06-04 14:24:29,019 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:24:41] 2025-06-04 14:24:29,020 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:24:41] 2025-06-04 14:24:29,020 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:24:41] 2025-06-04 14:24:29,023 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:24:41] 2025-06-04 14:24:29,023 | INFO     | sum of square deviations: 197203697.5
[2025-06-04 10:24:41] 2025-06-04 14:24:29,024 | INFO     | sum of deviations: -8245432037.0
[2025-06-04 10:24:41] 2025-06-04 14:24:29,024 | INFO     | mean x: 1749044293.5
[2025-06-04 10:24:41] 2025-06-04 14:24:29,024 | INFO     | mean y: 2745336.511627907
[2025-06-04 10:24:41] 2025-06-04 14:24:29,024 | INFO     | -- intersect: 73133351073.54112
[2025-06-04 10:24:41] 2025-06-04 14:24:29,025 | INFO     | intersect: 73133351073.54112
[2025-06-04 10:24:41] 2025-06-04 14:24:29,025 | INFO     | chi2: 0.1019540908296077
[2025-06-04 10:24:41] 2025-06-04 14:24:29,025 | INFO     | -- intersect: 73133351073.54112
[2025-06-04 10:24:41] 2025-06-04 14:24:29,025 | INFO     | current memory leak: -41.81 B/s (using 86 data points, chi2=0.10)
[2025-06-04 10:24:41] 2025-06-04 14:24:29,026 | INFO     | ..............................
[2025-06-04 10:24:41] 2025-06-04 14:24:29,026 | INFO     | . Timing measurements:
[2025-06-04 10:24:41] 2025-06-04 14:24:29,026 | INFO     | . get job = 0 s
[2025-06-04 10:24:41] 2025-06-04 14:24:29,026 | INFO     | . initial setup = 2 s
[2025-06-04 10:24:41] 2025-06-04 14:24:29,027 | INFO     | . payload setup = 9 s
[2025-06-04 10:24:41] 2025-06-04 14:24:29,027 | INFO     | . stage-in = 0 s
[2025-06-04 10:24:41] 2025-06-04 14:24:29,027 | INFO     | . payload execution = 5665 s
[2025-06-04 10:24:41] 2025-06-04 14:24:29,027 | INFO     | . stage-out = 0 s
[2025-06-04 10:24:41] 2025-06-04 14:24:29,027 | INFO     | . log creation = 0 s
[2025-06-04 10:24:41] 2025-06-04 14:24:29,027 | INFO     | ..............................
[2025-06-04 10:24:41] 2025-06-04 14:24:29,113 | INFO     | 
[2025-06-04 10:24:41] 2025-06-04 14:24:29,113 | INFO     | job summary report
[2025-06-04 10:24:41] 2025-06-04 14:24:29,114 | INFO     | --------------------------------------------------
[2025-06-04 10:24:41] 2025-06-04 14:24:29,114 | INFO     | PanDA job id: 6679405244
[2025-06-04 10:24:41] 2025-06-04 14:24:29,114 | INFO     | task id: 44871837
[2025-06-04 10:24:41] 2025-06-04 14:24:29,114 | INFO     | errors: (none)
[2025-06-04 10:24:41] 2025-06-04 14:24:29,114 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:24:41] 2025-06-04 14:24:29,114 | INFO     | pilot state: finished 
[2025-06-04 10:24:41] 2025-06-04 14:24:29,115 | INFO     | transexitcode: 0
[2025-06-04 10:24:41] 2025-06-04 14:24:29,115 | INFO     | exeerrorcode: 0
[2025-06-04 10:24:41] 2025-06-04 14:24:29,115 | INFO     | exeerrordiag: 
[2025-06-04 10:24:41] 2025-06-04 14:24:29,115 | INFO     | exitcode: 0
[2025-06-04 10:24:41] 2025-06-04 14:24:29,115 | INFO     | exitmsg: OK
[2025-06-04 10:24:41] 2025-06-04 14:24:29,115 | INFO     | cpuconsumptiontime: 62301 s
[2025-06-04 10:24:41] 2025-06-04 14:24:29,116 | INFO     | nevents: 400
[2025-06-04 10:24:41] 2025-06-04 14:24:29,116 | INFO     | neventsw: 0
[2025-06-04 10:24:41] 2025-06-04 14:24:29,116 | INFO     | pid: 21795
[2025-06-04 10:24:41] 2025-06-04 14:24:29,116 | INFO     | pgrp: 21795
[2025-06-04 10:24:41] 2025-06-04 14:24:29,116 | INFO     | corecount: 12
[2025-06-04 10:24:41] 2025-06-04 14:24:29,116 | INFO     | event service: False
[2025-06-04 10:24:41] 2025-06-04 14:24:29,117 | INFO     | sizes: {0: 2397171, 1: 2397370, 5: 2397576, 11: 2397632, 5678: 2424104, 5679: 2433045, 5682: 2433229, 5687: 2433399}
[2025-06-04 10:24:41] 2025-06-04 14:24:29,117 | INFO     | --------------------------------------------------
[2025-06-04 10:24:41] 2025-06-04 14:24:29,117 | INFO     | 
[2025-06-04 10:24:41] 2025-06-04 14:24:29,117 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 10:24:41] 2025-06-04 14:24:29,141 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:24:41] 2025-06-04 14:24:29,142 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:24:41] 2025-06-04 14:24:29,142 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:24:41] 2025-06-04 14:24:29,142 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:24:41] 2025-06-04 14:24:29,142 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:24:41] 2025-06-04 14:24:29,143 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:24:41] 2025-06-04 14:24:29,143 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:24:41] 2025-06-04 14:24:29,143 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:24:41] 2025-06-04 14:24:29,143 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:24:41] 2025-06-04 14:24:29,143 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:24:41] 2025-06-04 14:24:29,143 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:24:41] 2025-06-04 14:24:29,144 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:24:41] 2025-06-04 14:24:29,144 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:24:41] 2025-06-04 14:24:29,144 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:24:41] 2025-06-04 14:24:29,144 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:24:41] 2025-06-04 14:24:29,144 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:24:41] 2025-06-04 14:24:29,144 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:24:41] 2025-06-04 14:24:29,145 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:24:41] 2025-06-04 14:24:29,145 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:24:41] 2025-06-04 14:24:29,145 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:24:41] 2025-06-04 14:24:29,145 | INFO     | job 6679405244 has completed (purged errors)
[2025-06-04 10:24:41] 2025-06-04 14:24:29,145 | INFO     | overall cleanup function is called
[2025-06-04 10:24:41] 2025-06-04 14:24:30,154 | INFO     | --- collectZombieJob: --- 10, [21795]
[2025-06-04 10:24:41] 2025-06-04 14:24:30,154 | INFO     | zombie collector waiting for pid 21795
[2025-06-04 10:24:41] 2025-06-04 14:24:30,166 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:24:41] 2025-06-04 14:24:30,166 | INFO     | collected zombie processes
[2025-06-04 10:24:41] 2025-06-04 14:24:30,166 | INFO     | will attempt to kill all subprocesses of pid=21795
[2025-06-04 10:24:41] 2025-06-04 14:24:30,256 | INFO     | process IDs to be killed: [21795] (in reverse order)
[2025-06-04 10:24:41] 2025-06-04 14:24:30,331 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:24:41] 2025-06-04 14:24:30,331 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:24:41] 2025-06-04 14:24:30,333 | INFO     | did not find any defunct processes belonging to 21795
[2025-06-04 10:24:41] 2025-06-04 14:24:30,337 | INFO     | did not find any defunct processes belonging to 21795
[2025-06-04 10:24:41] 2025-06-04 14:24:30,337 | INFO     | ready for new job
[2025-06-04 10:24:41] 2025-06-04 14:24:30,337 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:24:41] 2025-06-04 14:24:30,339 | INFO     | **************************************
[2025-06-04 10:24:41] 2025-06-04 14:24:30,339 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:24:41] 2025-06-04 14:24:30,339 | INFO     | **************************************
[2025-06-04 10:24:41] 2025-06-04 14:24:30,339 | INFO     | 
[2025-06-04 10:24:41] 2025-06-04 14:24:30,340 | INFO     | architecture information:
[2025-06-04 10:24:41] 2025-06-04 14:24:30,340 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:24:41] 2025-06-04 14:24:30,356 | INFO     | cat /etc/os-release:
[2025-06-04 10:24:41] NAME="CentOS Linux"
[2025-06-04 10:24:41] VERSION="7 (Core)"
[2025-06-04 10:24:41] ID="centos"
[2025-06-04 10:24:41] ID_LIKE="rhel fedora"
[2025-06-04 10:24:41] VERSION_ID="7"
[2025-06-04 10:24:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:24:41] ANSI_COLOR="0;31"
[2025-06-04 10:24:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:24:41] HOME_URL="https://www.centos.org/"
[2025-06-04 10:24:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:24:41] 
[2025-06-04 10:24:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:24:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:24:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:24:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:24:41] 
[2025-06-04 10:24:41] 2025-06-04 14:24:30,356 | INFO     | **************************************
[2025-06-04 10:24:41] 2025-06-04 14:24:30,859 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 10:24:41] 2025-06-04 14:24:30,876 | INFO     | sufficient remaining disk space (29379002368 B)
[2025-06-04 10:24:41] 2025-06-04 14:24:30,876 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:24:41] 2025-06-04 14:24:30,877 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:24:41] 2025-06-04 14:24:30,877 | INFO     | update_server=False
[2025-06-04 10:24:41] 2025-06-04 14:24:30,877 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:24:41] 2025-06-04 14:24:30,877 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:24:41] 2025-06-04 14:24:30,878 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:24:41] 2025-06-04 14:24:30,878 | INFO     | aborting loop
[2025-06-04 10:24:41] 2025-06-04 14:24:30,878 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:24:41] 2025-06-04 14:24:31,171 | INFO     | all data control threads have been joined
[2025-06-04 10:24:41] 2025-06-04 14:24:31,278 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:24:41] 2025-06-04 14:24:31,279 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:24:41] 2025-06-04 14:24:31,279 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:24:41] 2025-06-04 14:24:31,296 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:24:41] 2025-06-04 14:24:31,580 | INFO     | all job control threads have been joined
[2025-06-04 10:24:41] 2025-06-04 14:24:31,880 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:24:41] 2025-06-04 14:24:31,882 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:24:41] 2025-06-04 14:24:31,882 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:24:41] 2025-06-04 14:24:32,097 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:24:41] 2025-06-04 14:24:32,140 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:24:41] 2025-06-04 14:24:32,176 | INFO     | [data] control thread has finished
[2025-06-04 10:24:41] 2025-06-04 14:24:32,231 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:24:41] 2025-06-04 14:24:32,239 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:24:41] 2025-06-04 14:24:32,317 | INFO     | all payload control threads have been joined
[2025-06-04 10:24:41] 2025-06-04 14:24:32,585 | INFO     | [job] control thread has finished
[2025-06-04 10:24:41] 2025-06-04 14:24:32,629 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:24:41] 2025-06-04 14:24:32,864 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:24:41] 2025-06-04 14:24:32,901 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:24:41] 2025-06-04 14:24:33,170 | INFO     | [job] validate thread has finished
[2025-06-04 10:24:41] 2025-06-04 14:24:33,301 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:24:41] 2025-06-04 14:24:33,322 | INFO     | [payload] control thread has finished
[2025-06-04 10:24:41] 2025-06-04 14:24:34,884 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:24:41] 2025-06-04 14:24:36,087 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140652679690048)>', '<ExcThread(monitor, started 140652243310336)>']
[2025-06-04 10:24:41] 2025-06-04 14:24:36,304 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:24:41] 2025-06-04 14:24:36,305 | INFO     | [monitor] control thread has ended
[2025-06-04 10:24:41] 2025-06-04 14:24:41,108 | INFO     | all workflow threads have been joined
[2025-06-04 10:24:41] 2025-06-04 14:24:41,115 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:24:41] 2025-06-04 14:24:41,116 | INFO     | traces error code: 0
[2025-06-04 10:24:41] 2025-06-04 14:24:41,116 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:24:41] 2025-06-04 14:24:41,206 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:24:41] 2025-06-04 14:24:41,209 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:24:41] 2025-06-04 14:24:41,213 [wrapper] pilotpid: 15393
[2025-06-04 10:24:41] 2025-06-04 14:24:41,217 [wrapper] Pilot exit status: 0
[2025-06-04 10:24:41] 2025-06-04 14:24:41,234 [wrapper] pandaids: 6679405244
[2025-06-04 10:24:41] 2025-06-04 14:24:41,273 [wrapper] cleanup supervisor_pilot 19089 15394
[2025-06-04 10:24:41] 2025-06-04 14:24:41,277 [wrapper] Test setup, not cleaning
[2025-06-04 10:24:41] 2025-06-04 14:24:41,281 [wrapper] apfmon messages muted
[2025-06-04 10:24:41] 2025-06-04 14:24:41,285 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:24:41] 2025-06-04 14:24:41,289 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:24:41]  *** Error codes and diagnostics ***
[2025-06-04 10:24:41]     "exeErrorCode": 0,
[2025-06-04 10:24:41]     "exeErrorDiag": "",
[2025-06-04 10:24:41]     "pilotErrorCode": 0,
[2025-06-04 10:24:41]     "pilotErrorDiag": "",
[2025-06-04 10:24:41]  *** Listing of results directory ***
[2025-06-04 10:24:41] total 420232
[2025-06-04 10:24:41] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 10:24:41] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 05:01 queuedata.json
[2025-06-04 10:24:41] -rwx------ 1 boincer umatlas     37140 Jun  4 05:03 runpilot2-wrapper.sh
[2025-06-04 10:24:41] -rw-r--r-- 1 boincer umatlas       100 Jun  4 08:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:24:41] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 08:49 run_atlas
[2025-06-04 10:24:41] -rw-r--r-- 1 boincer umatlas       105 Jun  4 08:49 job.xml
[2025-06-04 10:24:41] -rw-r--r-- 2 boincer umatlas 223346592 Jun  4 08:49 EVNT.44871834._002534.pool.root.1
[2025-06-04 10:24:41] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:49 start_atlas.sh
[2025-06-04 10:24:41] drwxrwx--x 2 boincer umatlas      4096 Jun  4 08:49 shared
[2025-06-04 10:24:41] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 08:49 input.tar.gz
[2025-06-04 10:24:41] -rw-r--r-- 1 boincer umatlas         0 Jun  4 08:49 boinc_lockfile
[2025-06-04 10:24:41] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 08:49 pandaJob.out
[2025-06-04 10:24:41] -rw------- 1 boincer umatlas    986811 Jun  4 08:49 agis_schedconf.cvmfs.json
[2025-06-04 10:24:41] -rw------- 1 boincer umatlas   1598969 Jun  4 08:49 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:24:41] drwx------ 4 boincer umatlas      4096 Jun  4 08:49 pilot3
[2025-06-04 10:24:41] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 10:21 init_data.xml
[2025-06-04 10:24:41] -rw------- 1 boincer umatlas        95 Jun  4 10:23 pilot_heartbeat.json
[2025-06-04 10:24:41] -rw------- 1 boincer umatlas 201321225 Jun  4 10:23 HITS.44871837._102178.pool.root.1
[2025-06-04 10:24:41] -rw-r--r-- 1 boincer umatlas       530 Jun  4 10:23 boinc_task_state.xml
[2025-06-04 10:24:41] -rw------- 1 boincer umatlas      1048 Jun  4 10:24 memory_monitor_summary.json
[2025-06-04 10:24:41] -rw------- 1 boincer umatlas    376095 Jun  4 10:24 log.44871837._102178.job.log.tgz.1
[2025-06-04 10:24:41] -rw-r--r-- 1 boincer umatlas        27 Jun  4 10:24 wrapper_checkpoint.txt
[2025-06-04 10:24:41] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 10:24 boinc_mmap_file
[2025-06-04 10:24:41] -rw------- 1 boincer umatlas      7753 Jun  4 10:24 heartbeat.json
[2025-06-04 10:24:41] -rw------- 1 boincer umatlas      4353 Jun  4 10:24 pilotlog.txt
[2025-06-04 10:24:41] -rw------- 1 boincer umatlas    533068 Jun  4 10:24 log.44871837._102178.job.log.1
[2025-06-04 10:24:41] -rw------- 1 boincer umatlas       357 Jun  4 10:24 output.list
[2025-06-04 10:24:41] -rw-r--r-- 1 boincer umatlas       620 Jun  4 10:24 runtime_log
[2025-06-04 10:24:41] -rw------- 1 boincer umatlas    931840 Jun  4 10:24 result.tar.gz
[2025-06-04 10:24:41] -rw------- 1 boincer umatlas       659 Jun  4 10:24 s5kLDmdCzg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmF0aKDmlkNbJn.diag
[2025-06-04 10:24:41] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 10:24 runtime_log.err
[2025-06-04 10:24:41] -rw-r--r-- 1 boincer umatlas     21203 Jun  4 10:24 stderr.txt
[2025-06-04 10:24:41] HITS file was successfully produced:
[2025-06-04 10:24:41] -rw------- 1 boincer umatlas 201321225 Jun  4 10:23 shared/HITS.pool.root.1
[2025-06-04 10:24:41]  *** Contents of shared directory: ***
[2025-06-04 10:24:41] total 416148
[2025-06-04 10:24:41] -rw-r--r-- 2 boincer umatlas 223346592 Jun  4 08:49 ATLAS.root_0
[2025-06-04 10:24:41] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:49 start_atlas.sh
[2025-06-04 10:24:41] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 08:49 input.tar.gz
[2025-06-04 10:24:41] -rw------- 1 boincer umatlas 201321225 Jun  4 10:23 HITS.pool.root.1
[2025-06-04 10:24:41] -rw------- 1 boincer umatlas    931840 Jun  4 10:24 result.tar.gz
10:24:43 (11788): run_atlas exited; CPU time 62269.550128
10:24:43 (11788): called boinc_finish(0)

</stderr_txt>
]]>

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