Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
15:16:49 (597095): wrapper (7.7.26015): starting
15:16:49 (597095): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 15:16:49] Arguments: --nthreads 4
[2025-06-04 15:16:49] Threads: 4
[2025-06-04 15:16:49] Checking for CVMFS
[2025-06-04 15:16:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 15:16:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 15:16:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 15:16:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 15:16:49] 2.12.7.0 470199 124 54704 146780 3 187 8511007 10240001 1778 130560 0 355511 99.994 72924 4522 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-06-04 15:16:49] CVMFS is ok
[2025-06-04 15:16:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:16:49] Checking for apptainer binary...
[2025-06-04 15:16:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 15:16:49] Running /usr/bin/apptainer --version
[2025-06-04 15:16:49] apptainer version 1.3.4
[2025-06-04 15:16:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:16:50] julianvlneu
[2025-06-04 15:16:50] apptainer works
[2025-06-04 15:16:50] Set ATHENA_PROC_NUMBER=4
[2025-06-04 15:16:50] Set ATHENA_CORE_NUMBER=4
[2025-06-04 15:16:50] Starting ATLAS job with PandaID=6679145546
[2025-06-04 15:16:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:02:54]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:02:54]  is_tar=False
[2025-06-04 16:02:54]  lfn=log.45006595._055907.job.log.tgz.1
[2025-06-04 16:02:54]  mtime=0
[2025-06-04 16:02:54]  protocol_id=None
[2025-06-04 16:02:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 16:02:54]  replicas=None
[2025-06-04 16:02:54]  scope=mc23_13p6TeV
[2025-06-04 16:02:54]  status=None
[2025-06-04 16:02:54]  status_code=0
[2025-06-04 16:02:54]  storage_token=
[2025-06-04 16:02:54]  surl=/var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6679145546/log.45006595._055907.job.log.tgz.1
[2025-06-04 16:02:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bc/35/log.45006595._055907.job.log.tgz.1
[2025-06-04 16:02:54]  workdir=None
[2025-06-04 16:02:54] ]
[2025-06-04 16:02:54] 2025-06-04 14:02:27,232 | INFO     | transferring file log.45006595._055907.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6679145546/log.45006595._055907.job.log.tgz.1 to /var/li
[2025-06-04 16:02:54] 2025-06-04 14:02:27,232 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6679145546/log.45006595._055907.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2025-06-04 16:02:54] 2025-06-04 14:02:27,252 | INFO     | adding to output.list: log.45006595._055907.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bc/35/log.45006595._055907.job.log.tg
[2025-06-04 16:02:54] 2025-06-04 14:02:27,253 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 16:02:54] 2025-06-04 14:02:27,253 | INFO     | summary of transferred files:
[2025-06-04 16:02:54] 2025-06-04 14:02:27,253 | INFO     |  -- lfn=log.45006595._055907.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 16:02:54] 2025-06-04 14:02:27,253 | INFO     | stage-out finished correctly
[2025-06-04 16:02:54] 2025-06-04 14:02:29,250 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 16:02:54] 2025-06-04 14:02:29,272 | INFO     | job 6679145546 has state=finished
[2025-06-04 16:02:54] 2025-06-04 14:02:29,272 | INFO     | preparing for final server update for job 6679145546 in state='finished'
[2025-06-04 16:02:54] 2025-06-04 14:02:29,273 | INFO     | this job has now completed (state=finished)
[2025-06-04 16:02:54] 2025-06-04 14:02:29,273 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 16:02:54] 2025-06-04 14:02:29,273 | INFO     | log transfer has been attempted: DONE
[2025-06-04 16:02:54] 2025-06-04 14:02:29,273 | INFO     | job 6679145546 has finished - writing final server update
[2025-06-04 16:02:54] 2025-06-04 14:02:29,273 | INFO     | total number of processed events: 400 (read)
[2025-06-04 16:02:54] 2025-06-04 14:02:29,274 | INFO     | executing command: lscpu
[2025-06-04 16:02:54] 2025-06-04 14:02:29,297 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 16:02:54] 2025-06-04 14:02:30,256 | WARNING  | process 607521 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 16:02:54] 2025-06-04 14:02:30,257 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6679145546/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:02:54] 2025-06-04 14:02:30,368 | INFO     | number of running child processes to parent process 607521: 1
[2025-06-04 16:02:54] 2025-06-04 14:02:30,368 | INFO     | maximum number of monitored processes: 6
[2025-06-04 16:02:54] 2025-06-04 14:02:32,872 | INFO     | monitor loop #212: job 0:6679145546 is in state 'finished'
[2025-06-04 16:02:54] 2025-06-04 14:02:32,872 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 16:02:54] 2025-06-04 14:02:33,355 | INFO     | PID=600843 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 16:02:54] 2025-06-04 14:02:33,355 | INFO     | .. there are 3 such processes running
[2025-06-04 16:02:54] 2025-06-04 14:02:34,377 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 16:02:54] 2025-06-04 14:02:34,378 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6679145546/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:02:54] 2025-06-04 14:02:34,378 | INFO     | extracted standard info from prmon json
[2025-06-04 16:02:54] 2025-06-04 14:02:34,378 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 16:02:54] 2025-06-04 14:02:34,378 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 16:02:54] 2025-06-04 14:02:34,378 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 16:02:54] 2025-06-04 14:02:34,378 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 16:02:54] 2025-06-04 14:02:34,379 | INFO     | fitting pss+swap vs Time
[2025-06-04 16:02:54] 2025-06-04 14:02:34,379 | INFO     | sum of square deviations: 17003109.5
[2025-06-04 16:02:54] 2025-06-04 14:02:34,379 | INFO     | sum of deviations: -534185540.0
[2025-06-04 16:02:54] 2025-06-04 14:02:34,379 | INFO     | mean x: 1749044487.5
[2025-06-04 16:02:54] 2025-06-04 14:02:34,379 | INFO     | mean y: 2349165.6315789474
[2025-06-04 16:02:54] 2025-06-04 14:02:34,379 | INFO     | -- intersect: 54951961413.86245
[2025-06-04 16:02:54] 2025-06-04 14:02:34,379 | INFO     | intersect: 54951961413.86245
[2025-06-04 16:02:54] 2025-06-04 14:02:34,379 | INFO     | chi2: 0.00914029792102837
[2025-06-04 16:02:54] 2025-06-04 14:02:34,379 | INFO     | -- intersect: 54951961413.86245
[2025-06-04 16:02:54] 2025-06-04 14:02:34,379 | INFO     | current memory leak: -31.42 B/s (using 38 data points, chi2=0.01)
[2025-06-04 16:02:54] 2025-06-04 14:02:34,380 | INFO     | ..............................
[2025-06-04 16:02:54] 2025-06-04 14:02:34,380 | INFO     | . Timing measurements:
[2025-06-04 16:02:54] 2025-06-04 14:02:34,380 | INFO     | . get job = 0 s
[2025-06-04 16:02:54] 2025-06-04 14:02:34,380 | INFO     | . initial setup = 1 s
[2025-06-04 16:02:54] 2025-06-04 14:02:34,380 | INFO     | . payload setup = 10 s
[2025-06-04 16:02:54] 2025-06-04 14:02:34,380 | INFO     | . stage-in = 0 s
[2025-06-04 16:02:54] 2025-06-04 14:02:34,380 | INFO     | . payload execution = 2694 s
[2025-06-04 16:02:54] 2025-06-04 14:02:34,380 | INFO     | . stage-out = 0 s
[2025-06-04 16:02:54] 2025-06-04 14:02:34,380 | INFO     | . log creation = 0 s
[2025-06-04 16:02:54] 2025-06-04 14:02:34,380 | INFO     | ..............................
[2025-06-04 16:02:54] 2025-06-04 14:02:34,902 | INFO     | 
[2025-06-04 16:02:54] 2025-06-04 14:02:34,902 | INFO     | job summary report
[2025-06-04 16:02:54] 2025-06-04 14:02:34,902 | INFO     | --------------------------------------------------
[2025-06-04 16:02:54] 2025-06-04 14:02:34,902 | INFO     | PanDA job id: 6679145546
[2025-06-04 16:02:54] 2025-06-04 14:02:34,902 | INFO     | task id: 45006595
[2025-06-04 16:02:54] 2025-06-04 14:02:34,902 | INFO     | errors: (none)
[2025-06-04 16:02:54] 2025-06-04 14:02:34,902 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:02:54] 2025-06-04 14:02:34,902 | INFO     | pilot state: finished 
[2025-06-04 16:02:54] 2025-06-04 14:02:34,902 | INFO     | transexitcode: 0
[2025-06-04 16:02:54] 2025-06-04 14:02:34,902 | INFO     | exeerrorcode: 0
[2025-06-04 16:02:54] 2025-06-04 14:02:34,902 | INFO     | exeerrordiag: 
[2025-06-04 16:02:54] 2025-06-04 14:02:34,902 | INFO     | exitcode: 0
[2025-06-04 16:02:54] 2025-06-04 14:02:34,902 | INFO     | exitmsg: OK
[2025-06-04 16:02:54] 2025-06-04 14:02:34,902 | INFO     | cpuconsumptiontime: 9889 s
[2025-06-04 16:02:54] 2025-06-04 14:02:34,902 | INFO     | nevents: 400
[2025-06-04 16:02:54] 2025-06-04 14:02:34,902 | INFO     | neventsw: 0
[2025-06-04 16:02:54] 2025-06-04 14:02:34,902 | INFO     | pid: 607521
[2025-06-04 16:02:54] 2025-06-04 14:02:34,902 | INFO     | pgrp: 607521
[2025-06-04 16:02:54] 2025-06-04 14:02:34,902 | INFO     | corecount: 4
[2025-06-04 16:02:54] 2025-06-04 14:02:34,902 | INFO     | event service: False
[2025-06-04 16:02:54] 2025-06-04 14:02:34,902 | INFO     | sizes: {0: 2397306, 5: 2397512, 11: 2397568, 2707: 2422797, 2708: 2422796, 2709: 2431821, 2711: 2432005, 2716: 2432175}
[2025-06-04 16:02:54] 2025-06-04 14:02:34,902 | INFO     | --------------------------------------------------
[2025-06-04 16:02:54] 2025-06-04 14:02:34,902 | INFO     | 
[2025-06-04 16:02:54] 2025-06-04 14:02:34,903 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/1
[2025-06-04 16:02:54] 2025-06-04 14:02:34,923 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:02:54] 2025-06-04 14:02:34,924 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:02:54] 2025-06-04 14:02:34,924 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:02:54] 2025-06-04 14:02:34,924 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:02:54] 2025-06-04 14:02:34,924 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:02:54] 2025-06-04 14:02:34,924 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:02:54] 2025-06-04 14:02:34,924 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:02:54] 2025-06-04 14:02:34,924 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:02:54] 2025-06-04 14:02:34,924 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:02:54] 2025-06-04 14:02:34,924 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:02:54] 2025-06-04 14:02:34,924 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:02:54] 2025-06-04 14:02:34,924 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:02:54] 2025-06-04 14:02:34,924 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:02:54] 2025-06-04 14:02:34,925 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:02:54] 2025-06-04 14:02:34,925 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:02:54] 2025-06-04 14:02:34,925 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:02:54] 2025-06-04 14:02:34,925 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:02:54] 2025-06-04 14:02:34,925 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:02:54] 2025-06-04 14:02:34,925 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:02:54] 2025-06-04 14:02:34,925 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:02:54] 2025-06-04 14:02:34,925 | INFO     | job 6679145546 has completed (purged errors)
[2025-06-04 16:02:54] 2025-06-04 14:02:34,925 | INFO     | overall cleanup function is called
[2025-06-04 16:02:54] 2025-06-04 14:02:35,932 | INFO     | --- collectZombieJob: --- 10, [607521]
[2025-06-04 16:02:54] 2025-06-04 14:02:35,932 | INFO     | zombie collector waiting for pid 607521
[2025-06-04 16:02:54] 2025-06-04 14:02:35,932 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:02:54] 2025-06-04 14:02:35,932 | INFO     | collected zombie processes
[2025-06-04 16:02:54] 2025-06-04 14:02:35,932 | INFO     | will attempt to kill all subprocesses of pid=607521
[2025-06-04 16:02:54] 2025-06-04 14:02:36,036 | INFO     | process IDs to be killed: [607521] (in reverse order)
[2025-06-04 16:02:54] 2025-06-04 14:02:36,095 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:02:54] 2025-06-04 14:02:36,095 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:02:54] 2025-06-04 14:02:36,099 | INFO     | did not find any defunct processes belonging to 607521
[2025-06-04 16:02:54] 2025-06-04 14:02:36,102 | INFO     | did not find any defunct processes belonging to 607521
[2025-06-04 16:02:54] 2025-06-04 14:02:36,102 | INFO     | ready for new job
[2025-06-04 16:02:54] 2025-06-04 14:02:36,102 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:02:54] 2025-06-04 14:02:36,103 | INFO     | **************************************
[2025-06-04 16:02:54] 2025-06-04 14:02:36,103 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:02:54] 2025-06-04 14:02:36,104 | INFO     | **************************************
[2025-06-04 16:02:54] 2025-06-04 14:02:36,104 | INFO     | 
[2025-06-04 16:02:54] 2025-06-04 14:02:36,104 | INFO     | pilot is running in a VM
[2025-06-04 16:02:54] 2025-06-04 14:02:36,104 | INFO     | architecture information:
[2025-06-04 16:02:54] 2025-06-04 14:02:36,105 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:02:54] 2025-06-04 14:02:36,118 | INFO     | cat /etc/os-release:
[2025-06-04 16:02:54] NAME="CentOS Linux"
[2025-06-04 16:02:54] VERSION="7 (Core)"
[2025-06-04 16:02:54] ID="centos"
[2025-06-04 16:02:54] ID_LIKE="rhel fedora"
[2025-06-04 16:02:54] VERSION_ID="7"
[2025-06-04 16:02:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:02:54] ANSI_COLOR="0;31"
[2025-06-04 16:02:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:02:54] HOME_URL="https://www.centos.org/"
[2025-06-04 16:02:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:02:54] 
[2025-06-04 16:02:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:02:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:02:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:02:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:02:54] 
[2025-06-04 16:02:54] 2025-06-04 14:02:36,118 | INFO     | **************************************
[2025-06-04 16:02:54] 2025-06-04 14:02:36,622 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/1
[2025-06-04 16:02:54] 2025-06-04 14:02:36,635 | INFO     | sufficient remaining disk space (27807186944 B)
[2025-06-04 16:02:54] 2025-06-04 14:02:36,636 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:02:54] 2025-06-04 14:02:36,636 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:02:54] 2025-06-04 14:02:36,636 | INFO     | update_server=False
[2025-06-04 16:02:54] 2025-06-04 14:02:36,636 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:02:54] 2025-06-04 14:02:36,636 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:02:54] 2025-06-04 14:02:36,637 | INFO     | aborting loop
[2025-06-04 16:02:54] 2025-06-04 14:02:36,642 | INFO     | all job control threads have been joined
[2025-06-04 16:02:54] 2025-06-04 14:02:36,759 | INFO     | all data control threads have been joined
[2025-06-04 16:02:54] 2025-06-04 14:02:37,027 | INFO     | all payload control threads have been joined
[2025-06-04 16:02:54] 2025-06-04 14:02:37,367 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:02:54] 2025-06-04 14:02:37,368 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:02:54] 2025-06-04 14:02:37,368 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:02:54] 2025-06-04 14:02:37,642 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:02:54] 2025-06-04 14:02:37,642 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:02:54] 2025-06-04 14:02:37,648 | INFO     | [job] control thread has finished
[2025-06-04 16:02:54] 2025-06-04 14:02:37,765 | INFO     | [data] control thread has finished
[2025-06-04 16:02:54] 2025-06-04 14:02:37,800 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:02:54] 2025-06-04 14:02:37,910 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:02:54] 2025-06-04 14:02:38,032 | INFO     | [payload] control thread has finished
[2025-06-04 16:02:54] 2025-06-04 14:02:38,260 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:02:54] 2025-06-04 14:02:38,272 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:02:54] 2025-06-04 14:02:38,991 | INFO     | [job] validate thread has finished
[2025-06-04 16:02:54] 2025-06-04 14:02:39,056 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:02:54] 2025-06-04 14:02:39,067 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:02:54] 2025-06-04 14:02:39,101 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:02:54] 2025-06-04 14:02:39,422 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:02:54] 2025-06-04 14:02:39,784 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:02:54] 2025-06-04 14:02:39,806 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:02:54] 2025-06-04 14:02:40,428 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:02:54] 2025-06-04 14:02:43,791 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:02:54] 2025-06-04 14:02:47,681 | INFO     | job.realtimelogging is not enabled
[2025-06-04 16:02:54] 2025-06-04 14:02:48,687 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:02:54] 2025-06-04 14:02:48,852 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137099539064640)>', '<ExcThread(monitor, started 137098166265600)>']
[2025-06-04 16:02:54] 2025-06-04 14:02:49,433 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:02:54] 2025-06-04 14:02:49,433 | INFO     | [monitor] control thread has ended
[2025-06-04 16:02:54] 2025-06-04 14:02:53,877 | INFO     | all workflow threads have been joined
[2025-06-04 16:02:54] 2025-06-04 14:02:53,878 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:02:54] 2025-06-04 14:02:53,878 | INFO     | traces error code: 0
[2025-06-04 16:02:54] 2025-06-04 14:02:53,878 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:02:54] 2025-06-04 14:02:53,944 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:02:54] 2025-06-04 14:02:53,950 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:02:54] 2025-06-04 14:02:53,954 [wrapper] pilotpid: 600843
[2025-06-04 16:02:54] 2025-06-04 14:02:53,959 [wrapper] Pilot exit status: 0
[2025-06-04 16:02:54] 2025-06-04 14:02:53,976 [wrapper] pandaids: 6679145546
[2025-06-04 16:02:54] 2025-06-04 14:02:54,018 [wrapper] cleanup supervisor_pilot  652767 600844
[2025-06-04 16:02:54] 2025-06-04 14:02:54,023 [wrapper] Test setup, not cleaning
[2025-06-04 16:02:54] 2025-06-04 14:02:54,028 [wrapper] apfmon messages muted
[2025-06-04 16:02:54] 2025-06-04 14:02:54,032 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:02:54] 2025-06-04 14:02:54,037 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:02:54]  *** Error codes and diagnostics ***
[2025-06-04 16:02:54]     "exeErrorCode": 0,
[2025-06-04 16:02:54]     "exeErrorDiag": "",
[2025-06-04 16:02:54]     "pilotErrorCode": 0,
[2025-06-04 16:02:54]     "pilotErrorDiag": "",
[2025-06-04 16:02:54]  *** Listing of results directory ***
[2025-06-04 16:02:54] insgesamt 389276
[2025-06-04 16:02:54] -rw-r--r-- 1 yeti boinc    495897 Jun  4 10:46 pilot3.tar.gz
[2025-06-04 16:02:54] -rwx------ 1 yeti boinc     37140 Jun  4 10:51 runpilot2-wrapper.sh
[2025-06-04 16:02:54] -rw-r--r-- 1 yeti boinc      5111 Jun  4 10:51 queuedata.json
[2025-06-04 16:02:54] -rw-r--r-- 1 yeti boinc       100 Jun  4 15:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:02:54] -rwxr-xr-x 1 yeti boinc      7986 Jun  4 15:16 run_atlas
[2025-06-04 16:02:54] -rw-r--r-- 1 yeti boinc       105 Jun  4 15:16 job.xml
[2025-06-04 16:02:54] -rw-r--r-- 2 yeti boinc 216880188 Jun  4 15:16 EVNT.45006593._001393.pool.root.1
[2025-06-04 16:02:54] -rw-r--r-- 2 yeti boinc     15093 Jun  4 15:16 start_atlas.sh
[2025-06-04 16:02:54] drwxrwx--x 2 yeti boinc      4096 Jun  4 15:16 shared
[2025-06-04 16:02:54] -rw-r--r-- 2 yeti boinc    508877 Jun  4 15:16 input.tar.gz
[2025-06-04 16:02:54] -rw-r--r-- 1 yeti boinc      6766 Jun  4 15:16 init_data.xml
[2025-06-04 16:02:54] -rw-r--r-- 1 yeti boinc         0 Jun  4 15:16 boinc_lockfile
[2025-06-04 16:02:54] -rw-r--r-- 1 yeti boinc      2525 Jun  4 15:16 pandaJob.out
[2025-06-04 16:02:54] -rw------- 1 yeti boinc    986811 Jun  4 15:17 agis_schedconf.cvmfs.json
[2025-06-04 16:02:54] -rw------- 1 yeti boinc   1598969 Jun  4 15:17 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:02:54] drwx------ 4 yeti boinc      4096 Jun  4 15:17 pilot3
[2025-06-04 16:02:54] -rw------- 1 yeti boinc 176877737 Jun  4 16:02 HITS.45006595._055907.pool.root.1
[2025-06-04 16:02:54] -rw-r--r-- 1 yeti boinc       528 Jun  4 16:02 boinc_task_state.xml
[2025-06-04 16:02:54] -rw------- 1 yeti boinc      1020 Jun  4 16:02 memory_monitor_summary.json
[2025-06-04 16:02:54] -rw------- 1 yeti boinc        95 Jun  4 16:02 pilot_heartbeat.json
[2025-06-04 16:02:54] -rw------- 1 yeti boinc    212866 Jun  4 16:02 log.45006595._055907.job.log.tgz.1
[2025-06-04 16:02:54] -rw------- 1 yeti boinc      7650 Jun  4 16:02 heartbeat.json
[2025-06-04 16:02:54] -rw-r--r-- 1 yeti boinc        26 Jun  4 16:02 wrapper_checkpoint.txt
[2025-06-04 16:02:54] -rw-r--r-- 1 yeti boinc      8192 Jun  4 16:02 boinc_mmap_file
[2025-06-04 16:02:54] -rw------- 1 yeti boinc      4501 Jun  4 16:02 pilotlog.txt
[2025-06-04 16:02:54] -rw------- 1 yeti boinc    299107 Jun  4 16:02 log.45006595._055907.job.log.1
[2025-06-04 16:02:54] -rw------- 1 yeti boinc       357 Jun  4 16:02 output.list
[2025-06-04 16:02:54] -rw-r--r-- 1 yeti boinc       620 Jun  4 16:02 runtime_log
[2025-06-04 16:02:54] -rw------- 1 yeti boinc    532480 Jun  4 16:02 result.tar.gz
[2025-06-04 16:02:54] -rw------- 1 yeti boinc       638 Jun  4 16:02 w9eLDmT1yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3pnKDmBZWrBo.diag
[2025-06-04 16:02:54] -rw-r--r-- 1 yeti boinc      8843 Jun  4 16:02 runtime_log.err
[2025-06-04 16:02:54] -rw-r--r-- 1 yeti boinc     21264 Jun  4 16:02 stderr.txt
[2025-06-04 16:02:54] HITS file was successfully produced:
[2025-06-04 16:02:54] -rw------- 1 yeti boinc 176877737 Jun  4 16:02 shared/HITS.pool.root.1
[2025-06-04 16:02:54]  *** Contents of shared directory: ***
[2025-06-04 16:02:54] insgesamt 385580
[2025-06-04 16:02:54] -rw-r--r-- 2 yeti boinc 216880188 Jun  4 15:16 ATLAS.root_0
[2025-06-04 16:02:54] -rw-r--r-- 2 yeti boinc     15093 Jun  4 15:16 start_atlas.sh
[2025-06-04 16:02:54] -rw-r--r-- 2 yeti boinc    508877 Jun  4 15:16 input.tar.gz
[2025-06-04 16:02:54] -rw------- 1 yeti boinc 176877737 Jun  4 16:02 HITS.pool.root.1
[2025-06-04 16:02:54] -rw------- 1 yeti boinc    532480 Jun  4 16:02 result.tar.gz
16:02:55 (597095): run_atlas exited; CPU time 9956.047444
16:02:55 (597095): called boinc_finish(0)

</stderr_txt>
]]>

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