Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:59:08 (280500): wrapper (7.7.26015): starting
08:59:08 (280500): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:59:08] Arguments: --nthreads 8
[2025-06-04 08:59:08] Threads: 8
[2025-06-04 08:59:08] Checking for CVMFS
[2025-06-04 08:59:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:59:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:59:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:59:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:59:09] 2.12.6.0 3854649 23304 479880 146780 2 622 25420845 32935936 13576 16776704 0 110900581 99.678 101490329 32703 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:59:09] CVMFS is ok
[2025-06-04 08:59:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:59:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:59:09] Further information can be found at the LHC@home message board.
[2025-06-04 08:59:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:59:09] Checking for apptainer binary...
[2025-06-04 08:59:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:59:09] Running /usr/bin/apptainer --version
[2025-06-04 08:59:09] apptainer version 1.4.1-1.el9
[2025-06-04 08:59:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:59:09] c6-4-5-3.aglt2.org
[2025-06-04 08:59:09] apptainer works
[2025-06-04 08:59:09] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:59:09] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:59:09] Starting ATLAS job with PandaID=6678915132
[2025-06-04 08:59:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:05:21]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:05:21]  guid=8b472f87-f030-4c69-ba02-c5c479e7d1bc
[2025-06-04 10:05:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 10:05:21]  is_altstaged=None
[2025-06-04 10:05:21]  is_tar=False
[2025-06-04 10:05:21]  lfn=log.45006595._055685.job.log.tgz.1
[2025-06-04 10:05:21]  mtime=0
[2025-06-04 10:05:21]  protocol_id=None
[2025-06-04 10:05:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:05:21]  replicas=None
[2025-06-04 10:05:21]  scope=mc23_13p6TeV
[2025-06-04 10:05:21]  status=None
[2025-06-04 10:05:21]  status_code=0
[2025-06-04 10:05:21]  storage_token=
[2025-06-04 10:05:21]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678915132/log.45006595._055685.job.log.tgz.1
[2025-06-04 10:05:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/24/log.45006595._055685.job.log.tgz.1
[2025-06-04 10:05:21]  workdir=None
[2025-06-04 10:05:21] ]
[2025-06-04 10:05:21] 2025-06-04 14:04:55,713 | INFO     | transferring file log.45006595._055685.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678915132/log.45006595._055685.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:05:21] 2025-06-04 14:04:55,713 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678915132/log.45006595._055685.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._055685.job
[2025-06-04 10:05:21] 2025-06-04 14:04:55,726 | INFO     | adding to output.list: log.45006595._055685.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/24/log.45006595._055685.job.log.tg
[2025-06-04 10:05:21] 2025-06-04 14:04:55,727 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:05:21] 2025-06-04 14:04:55,727 | INFO     | summary of transferred files:
[2025-06-04 10:05:21] 2025-06-04 14:04:55,727 | INFO     |  -- lfn=log.45006595._055685.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:05:21] 2025-06-04 14:04:55,728 | INFO     | stage-out finished correctly
[2025-06-04 10:05:21] 2025-06-04 14:04:55,809 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:05:21] 2025-06-04 14:04:55,950 | INFO     | monitor loop #294: job 0:6678915132 is in state 'finished'
[2025-06-04 10:05:21] 2025-06-04 14:04:55,950 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:05:21] 2025-06-04 14:04:57,161 | INFO     | job 6678915132 has state=finished
[2025-06-04 10:05:21] 2025-06-04 14:04:57,161 | INFO     | preparing for final server update for job 6678915132 in state='finished'
[2025-06-04 10:05:21] 2025-06-04 14:04:57,162 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:05:21] 2025-06-04 14:04:57,162 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:05:21] 2025-06-04 14:04:57,162 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:05:21] 2025-06-04 14:04:57,162 | INFO     | job 6678915132 has finished - writing final server update
[2025-06-04 10:05:21] 2025-06-04 14:04:57,162 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:05:21] 2025-06-04 14:04:57,178 | INFO     | executing command: lscpu
[2025-06-04 10:05:21] 2025-06-04 14:04:57,248 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:05:21] 2025-06-04 14:04:58,451 | INFO     | monitor loop #295: job 0:6678915132 is in state 'finished'
[2025-06-04 10:05:21] 2025-06-04 14:04:58,451 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:05:21] 2025-06-04 14:05:00,517 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 10:05:21] 2025-06-04 14:05:00,517 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678915132/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:05:21] 2025-06-04 14:05:00,519 | INFO     | extracted standard info from prmon json
[2025-06-04 10:05:21] 2025-06-04 14:05:00,519 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:05:21] 2025-06-04 14:05:00,519 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:05:21] 2025-06-04 14:05:00,520 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:05:21] 2025-06-04 14:05:00,520 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:05:21] 2025-06-04 14:05:00,521 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:05:21] 2025-06-04 14:05:00,522 | INFO     | sum of square deviations: 60482994.5
[2025-06-04 10:05:21] 2025-06-04 14:05:00,522 | INFO     | sum of deviations: 4973396337.5
[2025-06-04 10:05:21] 2025-06-04 14:05:00,522 | INFO     | mean x: 1749044025.5
[2025-06-04 10:05:21] 2025-06-04 14:05:00,522 | INFO     | mean y: 2157244.8103448274
[2025-06-04 10:05:21] 2025-06-04 14:05:00,522 | INFO     | -- intersect: -143818254136.24252
[2025-06-04 10:05:21] 2025-06-04 14:05:00,523 | INFO     | intersect: -143818254136.24252
[2025-06-04 10:05:21] 2025-06-04 14:05:00,523 | INFO     | chi2: 0.7064996430216155
[2025-06-04 10:05:21] 2025-06-04 14:05:00,523 | INFO     | -- intersect: -143818254136.24252
[2025-06-04 10:05:21] 2025-06-04 14:05:00,523 | INFO     | current memory leak: 82.23 B/s (using 58 data points, chi2=0.71)
[2025-06-04 10:05:21] 2025-06-04 14:05:00,523 | INFO     | ..............................
[2025-06-04 10:05:21] 2025-06-04 14:05:00,523 | INFO     | . Timing measurements:
[2025-06-04 10:05:21] 2025-06-04 14:05:00,524 | INFO     | . get job = 0 s
[2025-06-04 10:05:21] 2025-06-04 14:05:00,524 | INFO     | . initial setup = 2 s
[2025-06-04 10:05:21] 2025-06-04 14:05:00,524 | INFO     | . payload setup = 5 s
[2025-06-04 10:05:21] 2025-06-04 14:05:00,524 | INFO     | . stage-in = 0 s
[2025-06-04 10:05:21] 2025-06-04 14:05:00,524 | INFO     | . payload execution = 3912 s
[2025-06-04 10:05:21] 2025-06-04 14:05:00,524 | INFO     | . stage-out = 0 s
[2025-06-04 10:05:21] 2025-06-04 14:05:00,524 | INFO     | . log creation = 0 s
[2025-06-04 10:05:21] 2025-06-04 14:05:00,524 | INFO     | ..............................
[2025-06-04 10:05:21] 2025-06-04 14:05:00,612 | INFO     | 
[2025-06-04 10:05:21] 2025-06-04 14:05:00,612 | INFO     | job summary report
[2025-06-04 10:05:21] 2025-06-04 14:05:00,613 | INFO     | --------------------------------------------------
[2025-06-04 10:05:21] 2025-06-04 14:05:00,613 | INFO     | PanDA job id: 6678915132
[2025-06-04 10:05:21] 2025-06-04 14:05:00,613 | INFO     | task id: 45006595
[2025-06-04 10:05:21] 2025-06-04 14:05:00,613 | INFO     | errors: (none)
[2025-06-04 10:05:21] 2025-06-04 14:05:00,613 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:05:21] 2025-06-04 14:05:00,613 | INFO     | pilot state: finished 
[2025-06-04 10:05:21] 2025-06-04 14:05:00,613 | INFO     | transexitcode: 0
[2025-06-04 10:05:21] 2025-06-04 14:05:00,613 | INFO     | exeerrorcode: 0
[2025-06-04 10:05:21] 2025-06-04 14:05:00,613 | INFO     | exeerrordiag: 
[2025-06-04 10:05:21] 2025-06-04 14:05:00,614 | INFO     | exitcode: 0
[2025-06-04 10:05:21] 2025-06-04 14:05:00,614 | INFO     | exitmsg: OK
[2025-06-04 10:05:21] 2025-06-04 14:05:00,614 | INFO     | cpuconsumptiontime: 26101 s
[2025-06-04 10:05:21] 2025-06-04 14:05:00,614 | INFO     | nevents: 400
[2025-06-04 10:05:21] 2025-06-04 14:05:00,614 | INFO     | neventsw: 0
[2025-06-04 10:05:21] 2025-06-04 14:05:00,614 | INFO     | pid: 293787
[2025-06-04 10:05:21] 2025-06-04 14:05:00,614 | INFO     | pgrp: 293787
[2025-06-04 10:05:21] 2025-06-04 14:05:00,614 | INFO     | corecount: 8
[2025-06-04 10:05:21] 2025-06-04 14:05:00,614 | INFO     | event service: False
[2025-06-04 10:05:21] 2025-06-04 14:05:00,614 | INFO     | sizes: {0: 2397290, 4: 2397496, 11: 2397524, 3922: 2423343, 3924: 2432340, 3929: 2432454}
[2025-06-04 10:05:21] 2025-06-04 14:05:00,614 | INFO     | --------------------------------------------------
[2025-06-04 10:05:21] 2025-06-04 14:05:00,614 | INFO     | 
[2025-06-04 10:05:21] 2025-06-04 14:05:00,615 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 10:05:21] 2025-06-04 14:05:00,633 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:05:21] 2025-06-04 14:05:00,633 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:05:21] 2025-06-04 14:05:00,633 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:05:21] 2025-06-04 14:05:00,633 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:05:21] 2025-06-04 14:05:00,633 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:05:21] 2025-06-04 14:05:00,634 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:05:21] 2025-06-04 14:05:00,634 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:05:21] 2025-06-04 14:05:00,634 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:05:21] 2025-06-04 14:05:00,634 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:05:21] 2025-06-04 14:05:00,634 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:05:21] 2025-06-04 14:05:00,634 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:05:21] 2025-06-04 14:05:00,634 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:05:21] 2025-06-04 14:05:00,634 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:05:21] 2025-06-04 14:05:00,634 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:05:21] 2025-06-04 14:05:00,634 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:05:21] 2025-06-04 14:05:00,634 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:05:21] 2025-06-04 14:05:00,634 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:05:21] 2025-06-04 14:05:00,634 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:05:21] 2025-06-04 14:05:00,635 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:05:21] 2025-06-04 14:05:00,635 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:05:21] 2025-06-04 14:05:00,635 | INFO     | job 6678915132 has completed (purged errors)
[2025-06-04 10:05:21] 2025-06-04 14:05:00,635 | INFO     | overall cleanup function is called
[2025-06-04 10:05:21] 2025-06-04 14:05:00,851 | INFO     | PID=284139 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 10:05:21] 2025-06-04 14:05:00,851 | INFO     | .. there are 24 such processes running
[2025-06-04 10:05:21] 2025-06-04 14:05:01,643 | INFO     | --- collectZombieJob: --- 10, [293787]
[2025-06-04 10:05:21] 2025-06-04 14:05:01,643 | INFO     | zombie collector waiting for pid 293787
[2025-06-04 10:05:21] 2025-06-04 14:05:01,643 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:05:21] 2025-06-04 14:05:01,643 | INFO     | collected zombie processes
[2025-06-04 10:05:21] 2025-06-04 14:05:01,643 | INFO     | will attempt to kill all subprocesses of pid=293787
[2025-06-04 10:05:21] 2025-06-04 14:05:01,898 | INFO     | process IDs to be killed: [293787] (in reverse order)
[2025-06-04 10:05:21] 2025-06-04 14:05:01,985 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:05:21] 2025-06-04 14:05:01,985 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:05:21] 2025-06-04 14:05:01,996 | INFO     | did not find any defunct processes belonging to 293787
[2025-06-04 10:05:21] 2025-06-04 14:05:02,007 | INFO     | did not find any defunct processes belonging to 293787
[2025-06-04 10:05:21] 2025-06-04 14:05:02,008 | INFO     | ready for new job
[2025-06-04 10:05:21] 2025-06-04 14:05:02,008 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:05:21] 2025-06-04 14:05:02,009 | INFO     | **************************************
[2025-06-04 10:05:21] 2025-06-04 14:05:02,009 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:05:21] 2025-06-04 14:05:02,009 | INFO     | **************************************
[2025-06-04 10:05:21] 2025-06-04 14:05:02,009 | INFO     | 
[2025-06-04 10:05:21] 2025-06-04 14:05:02,024 | INFO     | architecture information:
[2025-06-04 10:05:21] 2025-06-04 14:05:02,025 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:05:21] 2025-06-04 14:05:02,039 | INFO     | cat /etc/os-release:
[2025-06-04 10:05:21] NAME="CentOS Linux"
[2025-06-04 10:05:21] VERSION="7 (Core)"
[2025-06-04 10:05:21] ID="centos"
[2025-06-04 10:05:21] ID_LIKE="rhel fedora"
[2025-06-04 10:05:21] VERSION_ID="7"
[2025-06-04 10:05:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:05:21] ANSI_COLOR="0;31"
[2025-06-04 10:05:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:05:21] HOME_URL="https://www.centos.org/"
[2025-06-04 10:05:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:05:21] 
[2025-06-04 10:05:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:05:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:05:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:05:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:05:21] 
[2025-06-04 10:05:21] 2025-06-04 14:05:02,040 | INFO     | **************************************
[2025-06-04 10:05:21] 2025-06-04 14:05:02,543 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 10:05:21] 2025-06-04 14:05:02,558 | INFO     | sufficient remaining disk space (76065800192 B)
[2025-06-04 10:05:21] 2025-06-04 14:05:02,558 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:05:21] 2025-06-04 14:05:02,558 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:05:21] 2025-06-04 14:05:02,558 | INFO     | update_server=False
[2025-06-04 10:05:21] 2025-06-04 14:05:02,559 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:05:21] 2025-06-04 14:05:02,559 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:05:21] 2025-06-04 14:05:02,559 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:05:21] 2025-06-04 14:05:02,559 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:05:21] 2025-06-04 14:05:02,560 | INFO     | aborting loop
[2025-06-04 10:05:21] 2025-06-04 14:05:02,583 | INFO     | all data control threads have been joined
[2025-06-04 10:05:21] 2025-06-04 14:05:02,850 | INFO     | all job control threads have been joined
[2025-06-04 10:05:21] 2025-06-04 14:05:02,857 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:05:21] 2025-06-04 14:05:02,857 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:05:21] 2025-06-04 14:05:02,857 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:05:21] 2025-06-04 14:05:03,109 | INFO     | all payload control threads have been joined
[2025-06-04 10:05:21] 2025-06-04 14:05:03,564 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:05:21] 2025-06-04 14:05:03,565 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:05:21] 2025-06-04 14:05:03,566 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:05:21] 2025-06-04 14:05:03,589 | INFO     | [data] control thread has finished
[2025-06-04 10:05:21] 2025-06-04 14:05:03,820 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:05:21] 2025-06-04 14:05:03,842 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:05:21] 2025-06-04 14:05:03,855 | INFO     | [job] control thread has finished
[2025-06-04 10:05:21] 2025-06-04 14:05:03,890 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:05:21] 2025-06-04 14:05:04,114 | INFO     | [payload] control thread has finished
[2025-06-04 10:05:21] 2025-06-04 14:05:04,197 | INFO     | [job] validate thread has finished
[2025-06-04 10:05:21] 2025-06-04 14:05:04,413 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:05:21] 2025-06-04 14:05:04,521 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:05:21] 2025-06-04 14:05:04,545 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:05:21] 2025-06-04 14:05:04,600 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:05:21] 2025-06-04 14:05:05,825 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:05:21] 2025-06-04 14:05:06,565 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:05:21] 2025-06-04 14:05:13,059 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:05:21] 2025-06-04 14:05:14,064 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:05:21] 2025-06-04 14:05:15,874 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140404751394624)>', '<ExcThread(monitor, started 140404242487040)>']
[2025-06-04 10:05:21] 2025-06-04 14:05:15,915 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:05:21] 2025-06-04 14:05:15,915 | INFO     | [monitor] control thread has ended
[2025-06-04 10:05:21] 2025-06-04 14:05:20,900 | INFO     | all workflow threads have been joined
[2025-06-04 10:05:21] 2025-06-04 14:05:20,900 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:05:21] 2025-06-04 14:05:20,900 | INFO     | traces error code: 0
[2025-06-04 10:05:21] 2025-06-04 14:05:20,900 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:05:21] 2025-06-04 14:05:21,053 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:05:21] 2025-06-04 14:05:21,055 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:05:21] 2025-06-04 14:05:21,058 [wrapper] pilotpid: 284139
[2025-06-04 10:05:21] 2025-06-04 14:05:21,060 [wrapper] Pilot exit status: 0
[2025-06-04 10:05:21] 2025-06-04 14:05:21,071 [wrapper] pandaids: 6678915132
[2025-06-04 10:05:21] 2025-06-04 14:05:21,128 [wrapper] cleanup supervisor_pilot  552570 284140
[2025-06-04 10:05:21] 2025-06-04 14:05:21,130 [wrapper] Test setup, not cleaning
[2025-06-04 10:05:21] 2025-06-04 14:05:21,133 [wrapper] apfmon messages muted
[2025-06-04 10:05:21] 2025-06-04 14:05:21,135 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:05:21] 2025-06-04 14:05:21,137 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:05:21]  *** Error codes and diagnostics ***
[2025-06-04 10:05:21]     "exeErrorCode": 0,
[2025-06-04 10:05:21]     "exeErrorDiag": "",
[2025-06-04 10:05:21]     "pilotErrorCode": 0,
[2025-06-04 10:05:21]     "pilotErrorDiag": "",
[2025-06-04 10:05:21]  *** Listing of results directory ***
[2025-06-04 10:05:21] total 388108
[2025-06-04 10:05:21] -rwx------. 1 boincer umatlas     37140 Jun  4 04:31 runpilot2-wrapper.sh
[2025-06-04 10:05:21] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:31 pilot3.tar.gz
[2025-06-04 10:05:21] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:32 queuedata.json
[2025-06-04 10:05:21] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:05:21] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:59 run_atlas
[2025-06-04 10:05:21] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:59 job.xml
[2025-06-04 10:05:21] -rw-r--r--. 2 boincer umatlas 215760625 Jun  4 08:59 EVNT.45006593._000681.pool.root.1
[2025-06-04 10:05:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:59 start_atlas.sh
[2025-06-04 10:05:21] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:59 shared
[2025-06-04 10:05:21] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 08:59 input.tar.gz
[2025-06-04 10:05:21] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:59 boinc_lockfile
[2025-06-04 10:05:21] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 08:59 pandaJob.out
[2025-06-04 10:05:21] -rw-------. 1 boincer umatlas    986811 Jun  4 08:59 agis_schedconf.cvmfs.json
[2025-06-04 10:05:21] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:59 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:05:21] drwx------. 4 boincer umatlas      4096 Jun  4 08:59 pilot3
[2025-06-04 10:05:21] -rw-r--r--. 1 boincer umatlas      6855 Jun  4 10:03 init_data.xml
[2025-06-04 10:05:21] -rw-------. 1 boincer umatlas 176445985 Jun  4 10:04 HITS.45006595._055685.pool.root.1
[2025-06-04 10:05:21] -rw-------. 1 boincer umatlas        95 Jun  4 10:04 pilot_heartbeat.json
[2025-06-04 10:05:21] -rw-r--r--. 1 boincer umatlas       529 Jun  4 10:04 boinc_task_state.xml
[2025-06-04 10:05:21] -rw-------. 1 boincer umatlas      1035 Jun  4 10:04 memory_monitor_summary.json
[2025-06-04 10:05:21] -rw-------. 1 boincer umatlas    298214 Jun  4 10:04 log.45006595._055685.job.log.tgz.1
[2025-06-04 10:05:21] -rw-------. 1 boincer umatlas      7709 Jun  4 10:05 heartbeat.json
[2025-06-04 10:05:21] -rw-r--r--. 1 boincer umatlas        27 Jun  4 10:05 wrapper_checkpoint.txt
[2025-06-04 10:05:21] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 10:05 boinc_mmap_file
[2025-06-04 10:05:21] -rw-------. 1 boincer umatlas      4425 Jun  4 10:05 pilotlog.txt
[2025-06-04 10:05:21] -rw-------. 1 boincer umatlas    396906 Jun  4 10:05 log.45006595._055685.job.log.1
[2025-06-04 10:05:21] -rw-------. 1 boincer umatlas       357 Jun  4 10:05 output.list
[2025-06-04 10:05:21] -rw-r--r--. 1 boincer umatlas       620 Jun  4 10:05 runtime_log
[2025-06-04 10:05:21] -rw-------. 1 boincer umatlas    716800 Jun  4 10:05 result.tar.gz
[2025-06-04 10:05:21] -rw-------. 1 boincer umatlas       650 Jun  4 10:05 ydaNDmZiyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9mnKDmJxipTn.diag
[2025-06-04 10:05:21] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 10:05 runtime_log.err
[2025-06-04 10:05:21] -rw-r--r--. 1 boincer umatlas     21322 Jun  4 10:05 stderr.txt
[2025-06-04 10:05:21] HITS file was successfully produced:
[2025-06-04 10:05:21] -rw-------. 1 boincer umatlas 176445985 Jun  4 10:04 shared/HITS.pool.root.1
[2025-06-04 10:05:21]  *** Contents of shared directory: ***
[2025-06-04 10:05:21] total 384236
[2025-06-04 10:05:21] -rw-r--r--. 2 boincer umatlas 215760625 Jun  4 08:59 ATLAS.root_0
[2025-06-04 10:05:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:59 start_atlas.sh
[2025-06-04 10:05:21] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 08:59 input.tar.gz
[2025-06-04 10:05:21] -rw-------. 1 boincer umatlas 176445985 Jun  4 10:04 HITS.pool.root.1
[2025-06-04 10:05:21] -rw-------. 1 boincer umatlas    716800 Jun  4 10:05 result.tar.gz
10:05:23 (280500): run_atlas exited; CPU time 26212.437704
10:05:23 (280500): called boinc_finish(0)

</stderr_txt>
]]>

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