Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:05:35 (386075): wrapper (7.7.26015): starting
03:05:35 (386075): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 03:05:35] Arguments: --nthreads 4
[2025-06-06 03:05:35] Threads: 4
[2025-06-06 03:05:35] Checking for CVMFS
[2025-06-06 03:05:35] No cvmfs_config command found, will try listing directly
[2025-06-06 03:05:35] CVMFS is ok
[2025-06-06 03:05:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 03:05:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 03:05:35] Further information can be found at the LHC@home message board.
[2025-06-06 03:05:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 03:05:35] Checking for apptainer binary...
[2025-06-06 03:05:35] which: no apptainer in ((null))
[2025-06-06 03:05:35] apptainer is not installed, using version from CVMFS
[2025-06-06 03:05:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 03:05:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-06-06 03:05:35] apptainer works
[2025-06-06 03:05:35] Set ATHENA_PROC_NUMBER=4
[2025-06-06 03:05:35] Set ATHENA_CORE_NUMBER=4
[2025-06-06 03:05:35] Starting ATLAS job with PandaID=6679261887
[2025-06-06 03:05:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 05:45:07]  *** The last 200 lines of the pilot log: ***
[2025-06-06 05:45:07] 2025-06-06 03:39:19,992 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 05:45:07] 2025-06-06 03:39:19,993 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6679261887/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 05:45:07] 2025-06-06 03:39:19,993 | INFO     | extracted standard info from prmon json
[2025-06-06 05:45:07] 2025-06-06 03:39:19,993 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 05:45:07] 2025-06-06 03:39:19,993 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 05:45:07] 2025-06-06 03:39:19,994 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 05:45:07] 2025-06-06 03:39:19,994 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 05:45:07] 2025-06-06 03:39:19,997 | INFO     | fitting pss+swap vs Time
[2025-06-06 05:45:07] 2025-06-06 03:39:19,998 | INFO     | sum of square deviations: 1067554900.0
[2025-06-06 05:45:07] 2025-06-06 03:39:19,998 | INFO     | sum of deviations: 18237942747.999996
[2025-06-06 05:45:07] 2025-06-06 03:39:19,998 | INFO     | mean x: 1749176547.0
[2025-06-06 05:45:07] 2025-06-06 03:39:19,999 | INFO     | mean y: 2266211.2913907287
[2025-06-06 05:45:07] 2025-06-06 03:39:19,999 | INFO     | -- intersect: -29880395298.978786
[2025-06-06 05:45:07] 2025-06-06 03:39:19,999 | INFO     | intersect: -29880395298.978786
[2025-06-06 05:45:07] 2025-06-06 03:39:19,999 | INFO     | chi2: 2.5604686949005515
[2025-06-06 05:45:07] 2025-06-06 03:39:19,999 | INFO     | sum of square deviations: 964976232.5
[2025-06-06 05:45:07] 2025-06-06 03:39:20,000 | INFO     | sum of deviations: 27115389380.0
[2025-06-06 05:45:07] 2025-06-06 03:39:20,000 | INFO     | mean x: 1749176394.5
[2025-06-06 05:45:07] 2025-06-06 03:39:20,000 | INFO     | mean y: 2279019.7260273974
[2025-06-06 05:45:07] 2025-06-06 03:39:20,000 | INFO     | -- intersect: -49148775103.435486
[2025-06-06 05:45:07] 2025-06-06 03:39:20,001 | INFO     | intersect: -49148775103.435486
[2025-06-06 05:45:07] 2025-06-06 03:39:20,001 | INFO     | chi2: 1.7016886337044503
[2025-06-06 05:45:07] 2025-06-06 03:39:20,001 | INFO     | current chi2=1.7016886337044503 (change=33.539955513084536 %)
[2025-06-06 05:45:07] 2025-06-06 03:39:20,001 | INFO     | sum of square deviations: 869188390.0
[2025-06-06 05:45:07] 2025-06-06 03:39:20,002 | INFO     | sum of deviations: 26054179578.0
[2025-06-06 05:45:07] 2025-06-06 03:39:20,002 | INFO     | mean x: 1749176242.0
[2025-06-06 05:45:07] 2025-06-06 03:39:20,002 | INFO     | mean y: 2277329.5460992907
[2025-06-06 05:45:07] 2025-06-06 03:39:20,002 | INFO     | -- intersect: -52429798900.37132
[2025-06-06 05:45:07] 2025-06-06 03:39:20,002 | INFO     | intersect: -52429798900.37132
[2025-06-06 05:45:07] 2025-06-06 03:39:20,002 | INFO     | chi2: 1.7029475926402458
[2025-06-06 05:45:07] 2025-06-06 03:39:20,003 | INFO     | current chi2=1.7029475926402458 (change=-0.07398291972220307 %)
[2025-06-06 05:45:07] 2025-06-06 03:39:20,003 | INFO     | right removable region: 140
[2025-06-06 05:45:07] 2025-06-06 03:39:20,003 | INFO     | sum of square deviations: 964976232.5
[2025-06-06 05:45:07] 2025-06-06 03:39:20,004 | INFO     | sum of deviations: -6693358437.499999
[2025-06-06 05:45:07] 2025-06-06 03:39:20,004 | INFO     | mean x: 1749176699.5
[2025-06-06 05:45:07] 2025-06-06 03:39:20,004 | INFO     | mean y: 2302835.47260274
[2025-06-06 05:45:07] 2025-06-06 03:39:20,004 | INFO     | -- intersect: 12135105930.471863
[2025-06-06 05:45:07] 2025-06-06 03:39:20,004 | INFO     | intersect: 12135105930.471863
[2025-06-06 05:45:07] 2025-06-06 03:39:20,004 | INFO     | chi2: 0.8956625646097259
[2025-06-06 05:45:07] 2025-06-06 03:39:20,005 | INFO     | current chi2=0.8956625646097259 (change=65.01958542224968 %)
[2025-06-06 05:45:07] 2025-06-06 03:39:20,005 | INFO     | sum of square deviations: 869188390.0
[2025-06-06 05:45:07] 2025-06-06 03:39:20,005 | INFO     | sum of deviations: -6646245911.0
[2025-06-06 05:45:07] 2025-06-06 03:39:20,006 | INFO     | mean x: 1749176852.0
[2025-06-06 05:45:07] 2025-06-06 03:39:20,006 | INFO     | mean y: 2302745.709219858
[2025-06-06 05:45:07] 2025-06-06 03:39:20,006 | INFO     | -- intersect: 13377377279.575062
[2025-06-06 05:45:07] 2025-06-06 03:39:20,006 | INFO     | intersect: 13377377279.575062
[2025-06-06 05:45:07] 2025-06-06 03:39:20,006 | INFO     | chi2: 0.8937583026231289
[2025-06-06 05:45:07] 2025-06-06 03:39:20,006 | INFO     | current chi2=0.8937583026231289 (change=0.21260930866600947 %)
[2025-06-06 05:45:07] 2025-06-06 03:39:20,006 | INFO     | left removable region: 20
[2025-06-06 05:45:07] 2025-06-06 03:39:20,007 | INFO     | sum of square deviations: 535786790.0
[2025-06-06 05:45:07] 2025-06-06 03:39:20,007 | INFO     | sum of deviations: 1443890343.5000002
[2025-06-06 05:45:07] 2025-06-06 03:39:20,007 | INFO     | mean x: 1749176821.5
[2025-06-06 05:45:07] 2025-06-06 03:39:20,007 | INFO     | mean y: 2319045.091666667
[2025-06-06 05:45:07] 2025-06-06 03:39:20,007 | INFO     | -- intersect: -4711532749.645329
[2025-06-06 05:45:07] 2025-06-06 03:39:20,008 | INFO     | intersect: -4711532749.645329
[2025-06-06 05:45:07] 2025-06-06 03:39:20,008 | INFO     | chi2: 0.00019462339486236015
[2025-06-06 05:45:07] 2025-06-06 03:39:20,008 | INFO     | -- intersect: -4711532749.645329
[2025-06-06 05:45:07] 2025-06-06 03:39:20,008 | INFO     | current memory leak: 2.69 B/s (using 120 data points, chi2=0.00)
[2025-06-06 05:45:07] 2025-06-06 03:39:20,009 | INFO     | ..............................
[2025-06-06 05:45:07] 2025-06-06 03:39:20,009 | INFO     | . Timing measurements:
[2025-06-06 05:45:07] 2025-06-06 03:39:20,009 | INFO     | . get job = 0 s
[2025-06-06 05:45:07] 2025-06-06 03:39:20,009 | INFO     | . initial setup = 1 s
[2025-06-06 05:45:07] 2025-06-06 03:39:20,009 | INFO     | . payload setup = 7 s
[2025-06-06 05:45:07] 2025-06-06 03:39:20,009 | INFO     | . stage-in = 0 s
[2025-06-06 05:45:07] 2025-06-06 03:39:20,009 | INFO     | . payload execution = 9181 s
[2025-06-06 05:45:07] 2025-06-06 03:39:20,009 | INFO     | . stage-out = 0 s
[2025-06-06 05:45:07] 2025-06-06 03:39:20,009 | INFO     | . log creation = 0 s
[2025-06-06 05:45:07] 2025-06-06 03:39:20,009 | INFO     | ..............................
[2025-06-06 05:45:07] 2025-06-06 03:39:20,591 | INFO     | 
[2025-06-06 05:45:07] 2025-06-06 03:39:20,592 | INFO     | job summary report
[2025-06-06 05:45:07] 2025-06-06 03:39:20,592 | INFO     | --------------------------------------------------
[2025-06-06 05:45:07] 2025-06-06 03:39:20,592 | INFO     | PanDA job id: 6679261887
[2025-06-06 05:45:07] 2025-06-06 03:39:20,592 | INFO     | task id: 45006595
[2025-06-06 05:45:07] 2025-06-06 03:39:20,592 | INFO     | errors: (none)
[2025-06-06 05:45:07] 2025-06-06 03:39:20,592 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 05:45:07] 2025-06-06 03:39:20,592 | INFO     | pilot state: finished 
[2025-06-06 05:45:07] 2025-06-06 03:39:20,592 | INFO     | transexitcode: 0
[2025-06-06 05:45:07] 2025-06-06 03:39:20,592 | INFO     | exeerrorcode: 0
[2025-06-06 05:45:07] 2025-06-06 03:39:20,593 | INFO     | exeerrordiag: 
[2025-06-06 05:45:07] 2025-06-06 03:39:20,593 | INFO     | exitcode: 0
[2025-06-06 05:45:07] 2025-06-06 03:39:20,593 | INFO     | exitmsg: OK
[2025-06-06 05:45:07] 2025-06-06 03:39:20,593 | INFO     | cpuconsumptiontime: 35228 s
[2025-06-06 05:45:07] 2025-06-06 03:39:20,593 | INFO     | nevents: 400
[2025-06-06 05:45:07] 2025-06-06 03:39:20,593 | INFO     | neventsw: 0
[2025-06-06 05:45:07] 2025-06-06 03:39:20,593 | INFO     | pid: 421669
[2025-06-06 05:45:07] 2025-06-06 03:39:20,593 | INFO     | pgrp: 421669
[2025-06-06 05:45:07] 2025-06-06 03:39:20,593 | INFO     | corecount: 4
[2025-06-06 05:45:07] 2025-06-06 03:39:20,593 | INFO     | event service: False
[2025-06-06 05:45:07] 2025-06-06 03:39:20,593 | INFO     | sizes: {0: 2397129, 1: 2397328, 5: 2397534, 11: 2397590, 9192: 2425769, 9193: 2434732, 9194: 2434916, 9199: 2435086}
[2025-06-06 05:45:07] 2025-06-06 03:39:20,593 | INFO     | --------------------------------------------------
[2025-06-06 05:45:07] 2025-06-06 03:39:20,593 | INFO     | 
[2025-06-06 05:45:07] 2025-06-06 03:39:20,594 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2025-06-06 05:45:07] 2025-06-06 03:39:20,615 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 05:45:07] 2025-06-06 03:39:20,616 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 05:45:07] 2025-06-06 03:39:20,616 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 05:45:07] 2025-06-06 03:39:20,616 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 05:45:07] 2025-06-06 03:39:20,616 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 05:45:07] 2025-06-06 03:39:20,616 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 05:45:07] 2025-06-06 03:39:20,616 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 05:45:07] 2025-06-06 03:39:20,616 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 05:45:07] 2025-06-06 03:39:20,616 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 05:45:07] 2025-06-06 03:39:20,616 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 05:45:07] 2025-06-06 03:39:20,616 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 05:45:07] 2025-06-06 03:39:20,617 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 05:45:07] 2025-06-06 03:39:20,617 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 05:45:07] 2025-06-06 03:39:20,617 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 05:45:07] 2025-06-06 03:39:20,617 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 05:45:07] 2025-06-06 03:39:20,617 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 05:45:07] 2025-06-06 03:39:20,617 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 05:45:07] 2025-06-06 03:39:20,617 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 05:45:07] 2025-06-06 03:39:20,617 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 05:45:07] 2025-06-06 03:39:20,617 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 05:45:07] 2025-06-06 03:39:20,617 | INFO     | job 6679261887 has completed (purged errors)
[2025-06-06 05:45:07] 2025-06-06 03:39:20,618 | INFO     | overall cleanup function is called
[2025-06-06 05:45:07] 2025-06-06 03:39:21,625 | INFO     | --- collectZombieJob: --- 10, [421669]
[2025-06-06 05:45:07] 2025-06-06 03:39:21,625 | INFO     | zombie collector waiting for pid 421669
[2025-06-06 05:45:07] 2025-06-06 03:39:21,626 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 05:45:07] 2025-06-06 03:39:21,626 | INFO     | collected zombie processes
[2025-06-06 05:45:07] 2025-06-06 03:39:21,626 | INFO     | will attempt to kill all subprocesses of pid=421669
[2025-06-06 05:45:07] 2025-06-06 03:39:21,997 | INFO     | process IDs to be killed: [421669] (in reverse order)
[2025-06-06 05:45:07] 2025-06-06 03:39:22,103 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 05:45:07] 2025-06-06 03:39:22,104 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 05:45:07] 2025-06-06 03:39:22,115 | INFO     | did not find any defunct processes belonging to 421669
[2025-06-06 05:45:07] 2025-06-06 03:39:22,126 | INFO     | did not find any defunct processes belonging to 421669
[2025-06-06 05:45:07] 2025-06-06 03:39:22,126 | INFO     | ready for new job
[2025-06-06 05:45:07] 2025-06-06 03:39:22,127 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 05:45:07] 2025-06-06 03:39:22,129 | INFO     | **************************************
[2025-06-06 05:45:07] 2025-06-06 03:39:22,129 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 05:45:07] 2025-06-06 03:39:22,129 | INFO     | **************************************
[2025-06-06 05:45:07] 2025-06-06 03:39:22,129 | INFO     | 
[2025-06-06 05:45:07] 2025-06-06 03:39:22,132 | INFO     | architecture information:
[2025-06-06 05:45:07] 2025-06-06 03:39:22,133 | INFO     | executing command: cat /etc/os-release
[2025-06-06 05:45:07] 2025-06-06 03:39:22,149 | INFO     | cat /etc/os-release:
[2025-06-06 05:45:07] NAME="CentOS Linux"
[2025-06-06 05:45:07] VERSION="7 (Core)"
[2025-06-06 05:45:07] ID="centos"
[2025-06-06 05:45:07] ID_LIKE="rhel fedora"
[2025-06-06 05:45:07] VERSION_ID="7"
[2025-06-06 05:45:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 05:45:07] ANSI_COLOR="0;31"
[2025-06-06 05:45:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 05:45:07] HOME_URL="https://www.centos.org/"
[2025-06-06 05:45:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 05:45:07] 
[2025-06-06 05:45:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 05:45:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 05:45:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 05:45:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 05:45:07] 
[2025-06-06 05:45:07] 2025-06-06 03:39:22,149 | INFO     | **************************************
[2025-06-06 05:45:07] 2025-06-06 03:39:22,652 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2025-06-06 05:45:07] 2025-06-06 03:39:22,668 | INFO     | sufficient remaining disk space (632367874048 B)
[2025-06-06 05:45:07] 2025-06-06 03:39:22,668 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 05:45:07] 2025-06-06 03:39:22,668 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 05:45:07] 2025-06-06 03:39:22,668 | INFO     | update_server=False
[2025-06-06 05:45:07] 2025-06-06 03:39:22,669 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 05:45:07] 2025-06-06 03:39:22,798 | INFO     | all payload control threads have been joined
[2025-06-06 05:45:07] 2025-06-06 03:39:23,006 | INFO     | all data control threads have been joined
[2025-06-06 05:45:07] 2025-06-06 03:39:23,257 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:45:07] 2025-06-06 03:39:23,257 | INFO     | aborting loop
[2025-06-06 05:45:07] 2025-06-06 03:39:23,352 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 05:45:07] 2025-06-06 03:39:23,352 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 05:45:07] 2025-06-06 03:39:23,352 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 05:45:07] 2025-06-06 03:39:23,674 | INFO     | [job] retrieve thread has finished
[2025-06-06 05:45:07] 2025-06-06 03:39:23,809 | INFO     | [payload] control thread has finished
[2025-06-06 05:45:07] 2025-06-06 03:39:23,980 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 05:45:07] 2025-06-06 03:39:24,011 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 05:45:07] 2025-06-06 03:39:24,012 | INFO     | [data] control thread has finished
[2025-06-06 05:45:07] 2025-06-06 03:39:24,213 | INFO     | all job control threads have been joined
[2025-06-06 05:45:07] 2025-06-06 03:39:24,263 | INFO     | [job] job monitor thread has finished
[2025-06-06 05:45:07] 2025-06-06 03:39:24,466 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 05:45:07] 2025-06-06 03:39:24,468 | INFO     | [job] validate thread has finished
[2025-06-06 05:45:07] 2025-06-06 03:39:24,777 | INFO     | [payload] validate_post thread has finished
[2025-06-06 05:45:07] 2025-06-06 03:39:24,866 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 05:45:07] 2025-06-06 03:39:24,899 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 05:45:07] 2025-06-06 03:39:25,116 | INFO     | [data] copytool_in thread has finished
[2025-06-06 05:45:07] 2025-06-06 03:39:25,118 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:45:07] 2025-06-06 03:39:25,217 | INFO     | [job] control thread has finished
[2025-06-06 05:45:07] 2025-06-06 03:39:25,264 | INFO     | [payload] failed_post thread has finished
[2025-06-06 05:45:07] 2025-06-06 03:39:25,834 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 05:45:07] 2025-06-06 03:39:26,017 | INFO     | [data] copytool_out thread has finished
[2025-06-06 05:45:07] 2025-06-06 03:39:26,123 | INFO     | [job] queue monitor thread has finished
[2025-06-06 05:45:07] 2025-06-06 03:39:29,840 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 05:45:07] 2025-06-06 03:39:30,540 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22855779661632)>', '<ExcThread(monitor, started 22855538403072)>']
[2025-06-06 05:45:07] 2025-06-06 03:39:31,392 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 05:45:07] 2025-06-06 03:39:31,393 | INFO     | [monitor] control thread has ended
[2025-06-06 05:45:07] 2025-06-06 03:39:35,551 | INFO     | all workflow threads have been joined
[2025-06-06 05:45:07] 2025-06-06 03:39:35,551 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 05:45:07] 2025-06-06 03:39:35,552 | INFO     | traces error code: 0
[2025-06-06 05:45:07] 2025-06-06 03:39:35,552 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 05:45:07] 2025-06-06 03:39:35,702 [wrapper] ==== pilot stdout END ====
[2025-06-06 05:45:07] 2025-06-06 03:39:35,705 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 05:45:07] 2025-06-06 03:39:35,708 [wrapper] pilotpid: 395263
[2025-06-06 05:45:07] 2025-06-06 03:39:35,710 [wrapper] Pilot exit status: 0
[2025-06-06 05:45:07] 2025-06-06 03:39:35,719 [wrapper] pandaids: 6679261887
[2025-06-06 05:45:07] 2025-06-06 03:39:35,789 [wrapper] cleanup supervisor_pilot  630616 395264
[2025-06-06 05:45:07] 2025-06-06 03:39:35,792 [wrapper] Test setup, not cleaning
[2025-06-06 05:45:07] 2025-06-06 03:39:35,795 [wrapper] apfmon messages muted
[2025-06-06 05:45:07] 2025-06-06 03:39:35,797 [wrapper] ==== wrapper stdout END ====
[2025-06-06 05:45:07] 2025-06-06 03:39:35,800 [wrapper] ==== wrapper stderr END ====
[2025-06-06 05:45:07]  *** Error codes and diagnostics ***
[2025-06-06 05:45:07]     "exeErrorCode": 0,
[2025-06-06 05:45:07]     "exeErrorDiag": "",
[2025-06-06 05:45:07]     "pilotErrorCode": 0,
[2025-06-06 05:45:07]     "pilotErrorDiag": "",
[2025-06-06 05:45:07]  *** Listing of results directory ***
[2025-06-06 05:45:07] total 391892
[2025-06-06 05:45:07] -rw-r--r-- 1 boinc boinc    495897 Jun  4 10:46 pilot3.tar.gz
[2025-06-06 05:45:07] -rw-r--r-- 1 boinc boinc      5111 Jun  4 10:56 queuedata.json
[2025-06-06 05:45:07] -rwx------ 1 boinc boinc     37140 Jun  4 10:56 runpilot2-wrapper.sh
[2025-06-06 05:45:07] -rw-r--r-- 1 boinc boinc       100 Jun  6 03:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 05:45:07] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 03:05 run_atlas
[2025-06-06 05:45:07] -rw-r--r-- 1 boinc boinc       105 Jun  6 03:05 job.xml
[2025-06-06 05:45:07] -rw-r--r-- 1 boinc boinc      6636 Jun  6 03:05 init_data.xml
[2025-06-06 05:45:07] -rw-r--r-- 2 boinc boinc 218601258 Jun  6 03:05 EVNT.45006593._000830.pool.root.1
[2025-06-06 05:45:07] -rw-r--r-- 2 boinc boinc     15093 Jun  6 03:05 start_atlas.sh
[2025-06-06 05:45:07] drwxrwx--x 2 boinc boinc      4096 Jun  6 03:05 shared
[2025-06-06 05:45:07] -rw-r--r-- 2 boinc boinc    508880 Jun  6 03:05 input.tar.gz
[2025-06-06 05:45:07] -rw-r--r-- 1 boinc boinc         0 Jun  6 03:05 boinc_lockfile
[2025-06-06 05:45:07] -rw-r--r-- 1 boinc boinc      2523 Jun  6 03:05 pandaJob.out
[2025-06-06 05:45:07] -rw------- 1 boinc boinc    987721 Jun  6 03:05 agis_schedconf.cvmfs.json
[2025-06-06 05:45:07] -rw------- 1 boinc boinc   1598969 Jun  6 03:05 agis_ddmendpoints.agis.ALL.json
[2025-06-06 05:45:07] drwx------ 4 boinc boinc      4096 Jun  6 03:05 pilot3
[2025-06-06 05:45:07] -rw------- 1 boinc boinc 176528238 Jun  6 05:38 HITS.45006595._056069.pool.root.1
[2025-06-06 05:45:07] -rw-r--r-- 1 boinc boinc       528 Jun  6 05:38 boinc_task_state.xml
[2025-06-06 05:45:07] -rw------- 1 boinc boinc      1033 Jun  6 05:39 memory_monitor_summary.json
[2025-06-06 05:45:07] -rw------- 1 boinc boinc    289482 Jun  6 05:39 log.45006595._056069.job.log.tgz.1
[2025-06-06 05:45:07] -rw------- 1 boinc boinc        95 Jun  6 05:39 pilot_heartbeat.json
[2025-06-06 05:45:07] -rw------- 1 boinc boinc      7730 Jun  6 05:39 heartbeat.json
[2025-06-06 05:45:07] -rw------- 1 boinc boinc      4363 Jun  6 05:39 pilotlog.txt
[2025-06-06 05:45:07] -rw------- 1 boinc boinc    874967 Jun  6 05:39 log.45006595._056069.job.log.1
[2025-06-06 05:45:07] -rw------- 1 boinc boinc       357 Jun  6 05:39 output.list
[2025-06-06 05:45:07] -rw-r--r-- 1 boinc boinc       620 Jun  6 05:39 runtime_log
[2025-06-06 05:45:07] -rw------- 1 boinc boinc   1187840 Jun  6 05:39 result.tar.gz
[2025-06-06 05:45:07] -rw-r--r-- 1 boinc boinc      9025 Jun  6 05:39 runtime_log.err
[2025-06-06 05:45:07] -rw------- 1 boinc boinc       662 Jun  6 05:39 phjKDmM6yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvrnKDmmFQJEn.diag
[2025-06-06 05:45:07] -rw-r--r-- 1 boinc boinc        26 Jun  6 05:44 wrapper_checkpoint.txt
[2025-06-06 05:45:07] -rw-r--r-- 1 boinc boinc      8192 Jun  6 05:45 boinc_mmap_file
[2025-06-06 05:45:07] -rw-r--r-- 1 boinc boinc     20592 Jun  6 05:45 stderr.txt
[2025-06-06 05:45:07] HITS file was successfully produced:
[2025-06-06 05:45:07] -rw------- 1 boinc boinc 176528238 Jun  6 05:38 shared/HITS.pool.root.1
[2025-06-06 05:45:07]  *** Contents of shared directory: ***
[2025-06-06 05:45:07] total 387556
[2025-06-06 05:45:07] -rw-r--r-- 2 boinc boinc 218601258 Jun  6 03:05 ATLAS.root_0
[2025-06-06 05:45:07] -rw-r--r-- 2 boinc boinc     15093 Jun  6 03:05 start_atlas.sh
[2025-06-06 05:45:07] -rw-r--r-- 2 boinc boinc    508880 Jun  6 03:05 input.tar.gz
[2025-06-06 05:45:07] -rw------- 1 boinc boinc 176528238 Jun  6 05:38 HITS.pool.root.1
[2025-06-06 05:45:07] -rw------- 1 boinc boinc   1187840 Jun  6 05:39 result.tar.gz
05:45:09 (386075): run_atlas exited; CPU time 35609.718884
05:45:09 (386075): called boinc_finish(0)

</stderr_txt>
]]>

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