Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:54:57 (3681111): wrapper (7.7.26015): starting
08:54:57 (3681111): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:54:57] Arguments: --nthreads 8
[2025-06-04 08:54:57] Threads: 8
[2025-06-04 08:54:57] Checking for CVMFS
[2025-06-04 08:54:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:54:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:54:58] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:54:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:54:58] 2.12.6.0 9081 31527 552388 146780 0 458 16556335 32935936 14265 16776704 0 179619270 99.654 159307961 25920 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:54:58] CVMFS is ok
[2025-06-04 08:54:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:54:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:54:58] Further information can be found at the LHC@home message board.
[2025-06-04 08:54:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:54:58] Checking for apptainer binary...
[2025-06-04 08:54:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:54:58] Running /usr/bin/apptainer --version
[2025-06-04 08:54:58] apptainer version 1.4.1-1.el9
[2025-06-04 08:54:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:54:58] c6-12-29-3.aglt2.org
[2025-06-04 08:54:58] apptainer works
[2025-06-04 08:54:58] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:54:58] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:54:58] Starting ATLAS job with PandaID=6679191965
[2025-06-04 08:54:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:01:41]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:01:41]  is_altstaged=None
[2025-06-04 10:01:41]  is_tar=False
[2025-06-04 10:01:41]  lfn=log.45006595._055982.job.log.tgz.1
[2025-06-04 10:01:41]  mtime=0
[2025-06-04 10:01:41]  protocol_id=None
[2025-06-04 10:01:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:01:41]  replicas=None
[2025-06-04 10:01:41]  scope=mc23_13p6TeV
[2025-06-04 10:01:41]  status=None
[2025-06-04 10:01:41]  status_code=0
[2025-06-04 10:01:41]  storage_token=
[2025-06-04 10:01:41]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6679191965/log.45006595._055982.job.log.tgz.1
[2025-06-04 10:01:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/7a/log.45006595._055982.job.log.tgz.1
[2025-06-04 10:01:41]  workdir=None
[2025-06-04 10:01:41] ]
[2025-06-04 10:01:41] 2025-06-04 14:01:18,547 | INFO     | transferring file log.45006595._055982.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6679191965/log.45006595._055982.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:01:41] 2025-06-04 14:01:18,547 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6679191965/log.45006595._055982.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._055982.job
[2025-06-04 10:01:41] 2025-06-04 14:01:18,565 | INFO     | adding to output.list: log.45006595._055982.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/7a/log.45006595._055982.job.log.tg
[2025-06-04 10:01:41] 2025-06-04 14:01:18,566 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:01:41] 2025-06-04 14:01:18,566 | INFO     | summary of transferred files:
[2025-06-04 10:01:41] 2025-06-04 14:01:18,566 | INFO     |  -- lfn=log.45006595._055982.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:01:41] 2025-06-04 14:01:18,566 | INFO     | stage-out finished correctly
[2025-06-04 10:01:41] 2025-06-04 14:01:20,254 | INFO     | monitor loop #293: job 0:6679191965 is in state 'finished'
[2025-06-04 10:01:41] 2025-06-04 14:01:20,254 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:01:41] 2025-06-04 14:01:21,514 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:01:41] 2025-06-04 14:01:22,757 | INFO     | monitor loop #294: job 0:6679191965 is in state 'finished'
[2025-06-04 10:01:41] 2025-06-04 14:01:22,757 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:01:41] 2025-06-04 14:01:23,602 | INFO     | job 6679191965 has state=finished
[2025-06-04 10:01:41] 2025-06-04 14:01:23,603 | INFO     | preparing for final server update for job 6679191965 in state='finished'
[2025-06-04 10:01:41] 2025-06-04 14:01:23,604 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:01:41] 2025-06-04 14:01:23,604 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:01:41] 2025-06-04 14:01:23,604 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:01:41] 2025-06-04 14:01:23,604 | INFO     | job 6679191965 has finished - writing final server update
[2025-06-04 10:01:41] 2025-06-04 14:01:23,604 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:01:41] 2025-06-04 14:01:23,621 | INFO     | executing command: lscpu
[2025-06-04 10:01:41] 2025-06-04 14:01:23,703 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:01:41] 2025-06-04 14:01:25,260 | INFO     | monitor loop #295: job 0:6679191965 is in state 'finished'
[2025-06-04 10:01:41] 2025-06-04 14:01:25,261 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:01:41] 2025-06-04 14:01:27,764 | INFO     | monitor loop #296: job 0:6679191965 is in state 'finished'
[2025-06-04 10:01:41] 2025-06-04 14:01:27,764 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:01:41] 2025-06-04 14:01:28,114 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 10:01:41] 2025-06-04 14:01:28,114 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6679191965/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:01:41] 2025-06-04 14:01:28,115 | INFO     | extracted standard info from prmon json
[2025-06-04 10:01:41] 2025-06-04 14:01:28,116 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:01:41] 2025-06-04 14:01:28,116 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:01:41] 2025-06-04 14:01:28,116 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:01:41] 2025-06-04 14:01:28,116 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:01:41] 2025-06-04 14:01:28,119 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:01:41] 2025-06-04 14:01:28,120 | INFO     | sum of square deviations: 60482994.5
[2025-06-04 10:01:41] 2025-06-04 14:01:28,120 | INFO     | sum of deviations: 6824808405.0
[2025-06-04 10:01:41] 2025-06-04 14:01:28,120 | INFO     | mean x: 1749043775.5
[2025-06-04 10:01:41] 2025-06-04 14:01:28,120 | INFO     | mean y: 2145883.620689655
[2025-06-04 10:01:41] 2025-06-04 14:01:28,120 | INFO     | -- intersect: -197357273213.02032
[2025-06-04 10:01:41] 2025-06-04 14:01:28,120 | INFO     | intersect: -197357273213.02032
[2025-06-04 10:01:41] 2025-06-04 14:01:28,120 | INFO     | chi2: 0.8992679126169003
[2025-06-04 10:01:41] 2025-06-04 14:01:28,121 | INFO     | -- intersect: -197357273213.02032
[2025-06-04 10:01:41] 2025-06-04 14:01:28,121 | INFO     | current memory leak: 112.84 B/s (using 58 data points, chi2=0.90)
[2025-06-04 10:01:41] 2025-06-04 14:01:28,121 | INFO     | ..............................
[2025-06-04 10:01:41] 2025-06-04 14:01:28,121 | INFO     | . Timing measurements:
[2025-06-04 10:01:41] 2025-06-04 14:01:28,121 | INFO     | . get job = 0 s
[2025-06-04 10:01:41] 2025-06-04 14:01:28,121 | INFO     | . initial setup = 2 s
[2025-06-04 10:01:41] 2025-06-04 14:01:28,121 | INFO     | . payload setup = 5 s
[2025-06-04 10:01:41] 2025-06-04 14:01:28,121 | INFO     | . stage-in = 0 s
[2025-06-04 10:01:41] 2025-06-04 14:01:28,121 | INFO     | . payload execution = 3945 s
[2025-06-04 10:01:41] 2025-06-04 14:01:28,121 | INFO     | . stage-out = 0 s
[2025-06-04 10:01:41] 2025-06-04 14:01:28,121 | INFO     | . log creation = 0 s
[2025-06-04 10:01:41] 2025-06-04 14:01:28,121 | INFO     | ..............................
[2025-06-04 10:01:41] 2025-06-04 14:01:28,309 | INFO     | 
[2025-06-04 10:01:41] 2025-06-04 14:01:28,310 | INFO     | job summary report
[2025-06-04 10:01:41] 2025-06-04 14:01:28,310 | INFO     | --------------------------------------------------
[2025-06-04 10:01:41] 2025-06-04 14:01:28,310 | INFO     | PanDA job id: 6679191965
[2025-06-04 10:01:41] 2025-06-04 14:01:28,310 | INFO     | task id: 45006595
[2025-06-04 10:01:41] 2025-06-04 14:01:28,310 | INFO     | errors: (none)
[2025-06-04 10:01:41] 2025-06-04 14:01:28,310 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:01:41] 2025-06-04 14:01:28,310 | INFO     | pilot state: finished 
[2025-06-04 10:01:41] 2025-06-04 14:01:28,310 | INFO     | transexitcode: 0
[2025-06-04 10:01:41] 2025-06-04 14:01:28,310 | INFO     | exeerrorcode: 0
[2025-06-04 10:01:41] 2025-06-04 14:01:28,310 | INFO     | exeerrordiag: 
[2025-06-04 10:01:41] 2025-06-04 14:01:28,310 | INFO     | exitcode: 0
[2025-06-04 10:01:41] 2025-06-04 14:01:28,311 | INFO     | exitmsg: OK
[2025-06-04 10:01:41] 2025-06-04 14:01:28,311 | INFO     | cpuconsumptiontime: 26340 s
[2025-06-04 10:01:41] 2025-06-04 14:01:28,311 | INFO     | nevents: 400
[2025-06-04 10:01:41] 2025-06-04 14:01:28,311 | INFO     | neventsw: 0
[2025-06-04 10:01:41] 2025-06-04 14:01:28,311 | INFO     | pid: 3691896
[2025-06-04 10:01:41] 2025-06-04 14:01:28,311 | INFO     | pgrp: 3691896
[2025-06-04 10:01:41] 2025-06-04 14:01:28,311 | INFO     | corecount: 8
[2025-06-04 10:01:41] 2025-06-04 14:01:28,311 | INFO     | event service: False
[2025-06-04 10:01:41] 2025-06-04 14:01:28,311 | INFO     | sizes: {0: 2397239, 4: 2397445, 11: 2397473, 3955: 2423241, 3956: 2432182, 3959: 2432238, 3966: 2432536}
[2025-06-04 10:01:41] 2025-06-04 14:01:28,311 | INFO     | --------------------------------------------------
[2025-06-04 10:01:41] 2025-06-04 14:01:28,311 | INFO     | 
[2025-06-04 10:01:41] 2025-06-04 14:01:28,311 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 10:01:41] 2025-06-04 14:01:28,337 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:01:41] 2025-06-04 14:01:28,337 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:01:41] 2025-06-04 14:01:28,337 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:01:41] 2025-06-04 14:01:28,337 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:01:41] 2025-06-04 14:01:28,337 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:01:41] 2025-06-04 14:01:28,337 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:01:41] 2025-06-04 14:01:28,337 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:01:41] 2025-06-04 14:01:28,337 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:01:41] 2025-06-04 14:01:28,337 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:01:41] 2025-06-04 14:01:28,337 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:01:41] 2025-06-04 14:01:28,338 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:01:41] 2025-06-04 14:01:28,338 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:01:41] 2025-06-04 14:01:28,338 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:01:41] 2025-06-04 14:01:28,338 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:01:41] 2025-06-04 14:01:28,338 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:01:41] 2025-06-04 14:01:28,338 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:01:41] 2025-06-04 14:01:28,338 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:01:41] 2025-06-04 14:01:28,338 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:01:41] 2025-06-04 14:01:28,338 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:01:41] 2025-06-04 14:01:28,338 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:01:41] 2025-06-04 14:01:28,338 | INFO     | job 6679191965 has completed (purged errors)
[2025-06-04 10:01:41] 2025-06-04 14:01:28,338 | INFO     | overall cleanup function is called
[2025-06-04 10:01:41] 2025-06-04 14:01:29,346 | INFO     | --- collectZombieJob: --- 10, [3691896]
[2025-06-04 10:01:41] 2025-06-04 14:01:29,346 | INFO     | zombie collector waiting for pid 3691896
[2025-06-04 10:01:41] 2025-06-04 14:01:29,346 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:01:41] 2025-06-04 14:01:29,347 | INFO     | collected zombie processes
[2025-06-04 10:01:41] 2025-06-04 14:01:29,347 | INFO     | will attempt to kill all subprocesses of pid=3691896
[2025-06-04 10:01:41] 2025-06-04 14:01:29,674 | INFO     | process IDs to be killed: [3691896] (in reverse order)
[2025-06-04 10:01:41] 2025-06-04 14:01:29,749 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:01:41] 2025-06-04 14:01:29,750 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:01:41] 2025-06-04 14:01:29,765 | INFO     | did not find any defunct processes belonging to 3691896
[2025-06-04 10:01:41] 2025-06-04 14:01:29,781 | INFO     | did not find any defunct processes belonging to 3691896
[2025-06-04 10:01:41] 2025-06-04 14:01:29,782 | INFO     | ready for new job
[2025-06-04 10:01:41] 2025-06-04 14:01:29,782 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:01:41] 2025-06-04 14:01:29,785 | INFO     | **************************************
[2025-06-04 10:01:41] 2025-06-04 14:01:29,785 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:01:41] 2025-06-04 14:01:29,785 | INFO     | **************************************
[2025-06-04 10:01:41] 2025-06-04 14:01:29,785 | INFO     | 
[2025-06-04 10:01:41] 2025-06-04 14:01:29,803 | INFO     | architecture information:
[2025-06-04 10:01:41] 2025-06-04 14:01:29,803 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:01:41] 2025-06-04 14:01:29,819 | INFO     | cat /etc/os-release:
[2025-06-04 10:01:41] NAME="CentOS Linux"
[2025-06-04 10:01:41] VERSION="7 (Core)"
[2025-06-04 10:01:41] ID="centos"
[2025-06-04 10:01:41] ID_LIKE="rhel fedora"
[2025-06-04 10:01:41] VERSION_ID="7"
[2025-06-04 10:01:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:01:41] ANSI_COLOR="0;31"
[2025-06-04 10:01:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:01:41] HOME_URL="https://www.centos.org/"
[2025-06-04 10:01:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:01:41] 
[2025-06-04 10:01:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:01:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:01:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:01:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:01:41] 
[2025-06-04 10:01:41] 2025-06-04 14:01:29,820 | INFO     | **************************************
[2025-06-04 10:01:41] 2025-06-04 14:01:30,322 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 10:01:41] 2025-06-04 14:01:30,341 | INFO     | sufficient remaining disk space (95754911744 B)
[2025-06-04 10:01:41] 2025-06-04 14:01:30,342 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:01:41] 2025-06-04 14:01:30,342 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:01:41] 2025-06-04 14:01:30,342 | INFO     | update_server=False
[2025-06-04 10:01:41] 2025-06-04 14:01:30,342 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:01:41] 2025-06-04 14:01:30,342 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 10:01:41] 2025-06-04 14:01:30,343 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:01:41] 2025-06-04 14:01:30,343 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:01:41] 2025-06-04 14:01:30,343 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:01:41] 2025-06-04 14:01:30,444 | INFO     | all payload control threads have been joined
[2025-06-04 10:01:41] 2025-06-04 14:01:31,155 | INFO     | all data control threads have been joined
[2025-06-04 10:01:41] 2025-06-04 14:01:31,272 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:01:41] 2025-06-04 14:01:31,273 | INFO     | aborting loop
[2025-06-04 10:01:41] 2025-06-04 14:01:31,348 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:01:41] 2025-06-04 14:01:31,450 | INFO     | [payload] control thread has finished
[2025-06-04 10:01:41] 2025-06-04 14:01:31,502 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:01:41] 2025-06-04 14:01:31,560 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:01:41] 2025-06-04 14:01:31,634 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:01:41] 2025-06-04 14:01:31,664 | INFO     | all job control threads have been joined
[2025-06-04 10:01:41] 2025-06-04 14:01:31,877 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:01:41] 2025-06-04 14:01:32,113 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:01:41] 2025-06-04 14:01:32,141 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:01:41] 2025-06-04 14:01:32,161 | INFO     | [data] control thread has finished
[2025-06-04 10:01:41] 2025-06-04 14:01:32,190 | INFO     | [job] validate thread has finished
[2025-06-04 10:01:41] 2025-06-04 14:01:32,248 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:01:41] 2025-06-04 14:01:32,279 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:01:41] 2025-06-04 14:01:32,524 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:01:41] 2025-06-04 14:01:32,630 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:01:41] 2025-06-04 14:01:32,670 | INFO     | [job] control thread has finished
[2025-06-04 10:01:41] 2025-06-04 14:01:33,182 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:01:41] 2025-06-04 14:01:33,640 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:01:41] 2025-06-04 14:01:34,188 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:01:41] 2025-06-04 14:01:36,118 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:01:41] 2025-06-04 14:01:36,602 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139679560709952)>', '<ExcThread(monitor, started 139679206713088)>']
[2025-06-04 10:01:41] 2025-06-04 14:01:37,378 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:01:41] 2025-06-04 14:01:37,379 | INFO     | [monitor] control thread has ended
[2025-06-04 10:01:41] 2025-06-04 14:01:41,628 | INFO     | all workflow threads have been joined
[2025-06-04 10:01:41] 2025-06-04 14:01:41,628 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:01:41] 2025-06-04 14:01:41,628 | INFO     | traces error code: 0
[2025-06-04 10:01:41] 2025-06-04 14:01:41,629 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:01:41] 2025-06-04 14:01:41,783 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:01:41] 2025-06-04 14:01:41,786 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:01:41] 2025-06-04 14:01:41,789 [wrapper] pilotpid: 3684877
[2025-06-04 10:01:41] 2025-06-04 14:01:41,792 [wrapper] Pilot exit status: 0
[2025-06-04 10:01:41] 2025-06-04 14:01:41,802 [wrapper] pandaids: 6679191965
[2025-06-04 10:01:41] 2025-06-04 14:01:41,857 [wrapper] cleanup supervisor_pilot 3879211 3684878
[2025-06-04 10:01:41] 2025-06-04 14:01:41,859 [wrapper] Test setup, not cleaning
[2025-06-04 10:01:41] 2025-06-04 14:01:41,863 [wrapper] apfmon messages muted
[2025-06-04 10:01:41] 2025-06-04 14:01:41,865 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:01:41] 2025-06-04 14:01:41,868 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:01:41]  *** Error codes and diagnostics ***
[2025-06-04 10:01:41]     "exeErrorCode": 0,
[2025-06-04 10:01:41]     "exeErrorDiag": "",
[2025-06-04 10:01:41]     "pilotErrorCode": 0,
[2025-06-04 10:01:41]     "pilotErrorDiag": "",
[2025-06-04 10:01:41]  *** Listing of results directory ***
[2025-06-04 10:01:41] total 391880
[2025-06-04 10:01:41] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 10:01:41] -rwx------. 1 boincer umatlas     37140 Jun  4 04:53 runpilot2-wrapper.sh
[2025-06-04 10:01:41] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:53 queuedata.json
[2025-06-04 10:01:41] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:01:41] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:54 run_atlas
[2025-06-04 10:01:41] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:54 job.xml
[2025-06-04 10:01:41] -rw-r--r--. 2 boincer umatlas 214321277 Jun  4 08:54 EVNT.45006593._000648.pool.root.1
[2025-06-04 10:01:41] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:54 shared
[2025-06-04 10:01:41] -rw-r--r--. 2 boincer umatlas    508875 Jun  4 08:54 input.tar.gz
[2025-06-04 10:01:41] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:54 start_atlas.sh
[2025-06-04 10:01:41] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:54 boinc_lockfile
[2025-06-04 10:01:41] -rw-r--r--. 1 boincer umatlas      2523 Jun  4 08:54 pandaJob.out
[2025-06-04 10:01:41] -rw-------. 1 boincer umatlas    986811 Jun  4 08:55 agis_schedconf.cvmfs.json
[2025-06-04 10:01:41] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:55 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:01:41] drwx------. 4 boincer umatlas      4096 Jun  4 08:55 pilot3
[2025-06-04 10:01:41] -rw-r--r--. 1 boincer umatlas      6859 Jun  4 09:55 init_data.xml
[2025-06-04 10:01:41] -rw-------. 1 boincer umatlas        95 Jun  4 10:00 pilot_heartbeat.json
[2025-06-04 10:01:41] -rw-------. 1 boincer umatlas 181751456 Jun  4 10:00 HITS.45006595._055982.pool.root.1
[2025-06-04 10:01:41] -rw-r--r--. 1 boincer umatlas       529 Jun  4 10:00 boinc_task_state.xml
[2025-06-04 10:01:41] -rw-------. 1 boincer umatlas      1032 Jun  4 10:01 memory_monitor_summary.json
[2025-06-04 10:01:41] -rw-------. 1 boincer umatlas    291985 Jun  4 10:01 log.45006595._055982.job.log.tgz.1
[2025-06-04 10:01:41] -rw-------. 1 boincer umatlas      7712 Jun  4 10:01 heartbeat.json
[2025-06-04 10:01:41] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 10:01 boinc_mmap_file
[2025-06-04 10:01:41] -rw-r--r--. 1 boincer umatlas        27 Jun  4 10:01 wrapper_checkpoint.txt
[2025-06-04 10:01:41] -rw-------. 1 boincer umatlas      4476 Jun  4 10:01 pilotlog.txt
[2025-06-04 10:01:41] -rw-------. 1 boincer umatlas    397449 Jun  4 10:01 log.45006595._055982.job.log.1
[2025-06-04 10:01:41] -rw-------. 1 boincer umatlas       357 Jun  4 10:01 output.list
[2025-06-04 10:01:41] -rw-r--r--. 1 boincer umatlas       620 Jun  4 10:01 runtime_log
[2025-06-04 10:01:41] -rw-------. 1 boincer umatlas    706560 Jun  4 10:01 result.tar.gz
[2025-06-04 10:01:41] -rw-r--r--. 1 boincer umatlas      8669 Jun  4 10:01 runtime_log.err
[2025-06-04 10:01:41] -rw-------. 1 boincer umatlas       653 Jun  4 10:01 l96NDmP3yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCrnKDmSOSCsn.diag
[2025-06-04 10:01:41] -rw-r--r--. 1 boincer umatlas     21451 Jun  4 10:01 stderr.txt
[2025-06-04 10:01:41] HITS file was successfully produced:
[2025-06-04 10:01:41] -rw-------. 1 boincer umatlas 181751456 Jun  4 10:00 shared/HITS.pool.root.1
[2025-06-04 10:01:41]  *** Contents of shared directory: ***
[2025-06-04 10:01:41] total 388008
[2025-06-04 10:01:41] -rw-r--r--. 2 boincer umatlas 214321277 Jun  4 08:54 ATLAS.root_0
[2025-06-04 10:01:41] -rw-r--r--. 2 boincer umatlas    508875 Jun  4 08:54 input.tar.gz
[2025-06-04 10:01:41] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:54 start_atlas.sh
[2025-06-04 10:01:41] -rw-------. 1 boincer umatlas 181751456 Jun  4 10:00 HITS.pool.root.1
[2025-06-04 10:01:41] -rw-------. 1 boincer umatlas    706560 Jun  4 10:01 result.tar.gz
10:01:43 (3681111): run_atlas exited; CPU time 26492.313573
10:01:43 (3681111): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN