Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:41:26 (1165203): wrapper (7.7.26015): starting
09:41:26 (1165203): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 09:41:26] Arguments: --nthreads 12
[2025-06-04 09:41:26] Threads: 12
[2025-06-04 09:41:26] Checking for CVMFS
[2025-06-04 09:41:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:41:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:41:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:41:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:41:26] 2.12.6.0 3367424 23361 458556 146781 0 145 19994471 32935936 8228 16776704 0 86877491 99.607 89200544 32548 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 09:41:26] CVMFS is ok
[2025-06-04 09:41:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:41:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:41:26] Further information can be found at the LHC@home message board.
[2025-06-04 09:41:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:41:26] Checking for apptainer binary...
[2025-06-04 09:41:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:41:26] Running /usr/bin/apptainer --version
[2025-06-04 09:41:26] apptainer version 1.4.1-1.el9
[2025-06-04 09:41:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:41:27] c6-2-29-4.aglt2.org
[2025-06-04 09:41:27] apptainer works
[2025-06-04 09:41:27] Set ATHENA_PROC_NUMBER=12
[2025-06-04 09:41:27] Set ATHENA_CORE_NUMBER=12
[2025-06-04 09:41:27] Starting ATLAS job with PandaID=6679182652
[2025-06-04 09:41:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:29:00]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:29:00]  protocol_id=None
[2025-06-04 10:29:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:29:00]  replicas=None
[2025-06-04 10:29:00]  scope=mc23_13p6TeV
[2025-06-04 10:29:00]  status=None
[2025-06-04 10:29:00]  status_code=0
[2025-06-04 10:29:00]  storage_token=
[2025-06-04 10:29:00]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679182652/log.45006595._055963.job.log.tgz.1
[2025-06-04 10:29:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e0/2b/log.45006595._055963.job.log.tgz.1
[2025-06-04 10:29:00]  workdir=None
[2025-06-04 10:29:00] ]
[2025-06-04 10:29:00] 2025-06-04 14:28:37,183 | INFO     | transferring file log.45006595._055963.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679182652/log.45006595._055963.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:29:00] 2025-06-04 14:28:37,183 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679182652/log.45006595._055963.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._055963.job
[2025-06-04 10:29:00] 2025-06-04 14:28:37,195 | INFO     | adding to output.list: log.45006595._055963.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e0/2b/log.45006595._055963.job.log.tg
[2025-06-04 10:29:00] 2025-06-04 14:28:37,195 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:29:00] 2025-06-04 14:28:37,195 | INFO     | summary of transferred files:
[2025-06-04 10:29:00] 2025-06-04 14:28:37,195 | INFO     |  -- lfn=log.45006595._055963.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:29:00] 2025-06-04 14:28:37,195 | INFO     | stage-out finished correctly
[2025-06-04 10:29:00] 2025-06-04 14:28:37,258 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:29:00] 2025-06-04 14:28:37,545 | INFO     | job 6679182652 has state=finished
[2025-06-04 10:29:00] 2025-06-04 14:28:37,546 | INFO     | preparing for final server update for job 6679182652 in state='finished'
[2025-06-04 10:29:00] 2025-06-04 14:28:37,546 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:29:00] 2025-06-04 14:28:37,546 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:29:00] 2025-06-04 14:28:37,546 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:29:00] 2025-06-04 14:28:37,546 | INFO     | job 6679182652 has finished - writing final server update
[2025-06-04 10:29:00] 2025-06-04 14:28:37,546 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:29:00] 2025-06-04 14:28:37,561 | INFO     | executing command: lscpu
[2025-06-04 10:29:00] 2025-06-04 14:28:37,618 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:29:00] 2025-06-04 14:28:40,278 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 10:29:00] 2025-06-04 14:28:40,278 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679182652/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:29:00] 2025-06-04 14:28:40,279 | INFO     | extracted standard info from prmon json
[2025-06-04 10:29:00] 2025-06-04 14:28:40,279 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:29:00] 2025-06-04 14:28:40,279 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:29:00] 2025-06-04 14:28:40,279 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:29:00] 2025-06-04 14:28:40,279 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:29:00] 2025-06-04 14:28:40,280 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:29:00] 2025-06-04 14:28:40,280 | INFO     | sum of square deviations: 18381740.0
[2025-06-04 10:29:00] 2025-06-04 14:28:40,281 | INFO     | sum of deviations: 6624437984.0
[2025-06-04 10:29:00] 2025-06-04 14:28:40,281 | INFO     | mean x: 1749045982.0
[2025-06-04 10:29:00] 2025-06-04 14:28:40,281 | INFO     | mean y: 2669009.230769231
[2025-06-04 10:29:00] 2025-06-04 14:28:40,281 | INFO     | -- intersect: -630321045662.1432
[2025-06-04 10:29:00] 2025-06-04 14:28:40,281 | INFO     | intersect: -630321045662.1432
[2025-06-04 10:29:00] 2025-06-04 14:28:40,281 | INFO     | chi2: 0.7408482067928299
[2025-06-04 10:29:00] 2025-06-04 14:28:40,281 | INFO     | -- intersect: -630321045662.1432
[2025-06-04 10:29:00] 2025-06-04 14:28:40,281 | INFO     | current memory leak: 360.38 B/s (using 39 data points, chi2=0.74)
[2025-06-04 10:29:00] 2025-06-04 14:28:40,281 | INFO     | ..............................
[2025-06-04 10:29:00] 2025-06-04 14:28:40,281 | INFO     | . Timing measurements:
[2025-06-04 10:29:00] 2025-06-04 14:28:40,281 | INFO     | . get job = 0 s
[2025-06-04 10:29:00] 2025-06-04 14:28:40,281 | INFO     | . initial setup = 2 s
[2025-06-04 10:29:00] 2025-06-04 14:28:40,281 | INFO     | . payload setup = 5 s
[2025-06-04 10:29:00] 2025-06-04 14:28:40,281 | INFO     | . stage-in = 0 s
[2025-06-04 10:29:00] 2025-06-04 14:28:40,281 | INFO     | . payload execution = 2797 s
[2025-06-04 10:29:00] 2025-06-04 14:28:40,281 | INFO     | . stage-out = 0 s
[2025-06-04 10:29:00] 2025-06-04 14:28:40,281 | INFO     | . log creation = 0 s
[2025-06-04 10:29:00] 2025-06-04 14:28:40,282 | INFO     | ..............................
[2025-06-04 10:29:00] 2025-06-04 14:28:40,329 | INFO     | 
[2025-06-04 10:29:00] 2025-06-04 14:28:40,330 | INFO     | job summary report
[2025-06-04 10:29:00] 2025-06-04 14:28:40,330 | INFO     | --------------------------------------------------
[2025-06-04 10:29:00] 2025-06-04 14:28:40,330 | INFO     | PanDA job id: 6679182652
[2025-06-04 10:29:00] 2025-06-04 14:28:40,330 | INFO     | task id: 45006595
[2025-06-04 10:29:00] 2025-06-04 14:28:40,330 | INFO     | errors: (none)
[2025-06-04 10:29:00] 2025-06-04 14:28:40,330 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:29:00] 2025-06-04 14:28:40,330 | INFO     | pilot state: finished 
[2025-06-04 10:29:00] 2025-06-04 14:28:40,330 | INFO     | transexitcode: 0
[2025-06-04 10:29:00] 2025-06-04 14:28:40,330 | INFO     | exeerrorcode: 0
[2025-06-04 10:29:00] 2025-06-04 14:28:40,330 | INFO     | exeerrordiag: 
[2025-06-04 10:29:00] 2025-06-04 14:28:40,330 | INFO     | exitcode: 0
[2025-06-04 10:29:00] 2025-06-04 14:28:40,330 | INFO     | exitmsg: OK
[2025-06-04 10:29:00] 2025-06-04 14:28:40,330 | INFO     | cpuconsumptiontime: 25751 s
[2025-06-04 10:29:00] 2025-06-04 14:28:40,330 | INFO     | nevents: 400
[2025-06-04 10:29:00] 2025-06-04 14:28:40,330 | INFO     | neventsw: 0
[2025-06-04 10:29:00] 2025-06-04 14:28:40,330 | INFO     | pid: 1175843
[2025-06-04 10:29:00] 2025-06-04 14:28:40,330 | INFO     | pgrp: 1175843
[2025-06-04 10:29:00] 2025-06-04 14:28:40,330 | INFO     | corecount: 12
[2025-06-04 10:29:00] 2025-06-04 14:28:40,330 | INFO     | event service: False
[2025-06-04 10:29:00] 2025-06-04 14:28:40,330 | INFO     | sizes: {0: 2397288, 4: 2397494, 11: 2397522, 2806: 2422848, 2807: 2431845, 2810: 2431959}
[2025-06-04 10:29:00] 2025-06-04 14:28:40,330 | INFO     | --------------------------------------------------
[2025-06-04 10:29:00] 2025-06-04 14:28:40,330 | INFO     | 
[2025-06-04 10:29:00] 2025-06-04 14:28:40,331 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 10:29:00] 2025-06-04 14:28:40,344 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:29:00] 2025-06-04 14:28:40,344 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:29:00] 2025-06-04 14:28:40,344 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:29:00] 2025-06-04 14:28:40,344 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:29:00] 2025-06-04 14:28:40,344 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:29:00] 2025-06-04 14:28:40,344 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:29:00] 2025-06-04 14:28:40,344 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:29:00] 2025-06-04 14:28:40,344 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:29:00] 2025-06-04 14:28:40,344 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:29:00] 2025-06-04 14:28:40,345 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:29:00] 2025-06-04 14:28:40,345 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:29:00] 2025-06-04 14:28:40,345 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:29:00] 2025-06-04 14:28:40,345 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:29:00] 2025-06-04 14:28:40,345 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:29:00] 2025-06-04 14:28:40,345 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:29:00] 2025-06-04 14:28:40,345 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:29:00] 2025-06-04 14:28:40,345 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:29:00] 2025-06-04 14:28:40,345 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:29:00] 2025-06-04 14:28:40,345 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:29:00] 2025-06-04 14:28:40,345 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:29:00] 2025-06-04 14:28:40,345 | INFO     | job 6679182652 has completed (purged errors)
[2025-06-04 10:29:00] 2025-06-04 14:28:40,345 | INFO     | overall cleanup function is called
[2025-06-04 10:29:00] 2025-06-04 14:28:41,352 | INFO     | --- collectZombieJob: --- 10, [1175843]
[2025-06-04 10:29:00] 2025-06-04 14:28:41,352 | INFO     | zombie collector waiting for pid 1175843
[2025-06-04 10:29:00] 2025-06-04 14:28:41,352 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:29:00] 2025-06-04 14:28:41,352 | INFO     | collected zombie processes
[2025-06-04 10:29:00] 2025-06-04 14:28:41,352 | INFO     | will attempt to kill all subprocesses of pid=1175843
[2025-06-04 10:29:00] 2025-06-04 14:28:41,488 | INFO     | process IDs to be killed: [1175843] (in reverse order)
[2025-06-04 10:29:00] 2025-06-04 14:28:41,540 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:29:00] 2025-06-04 14:28:41,541 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:29:00] 2025-06-04 14:28:41,550 | INFO     | did not find any defunct processes belonging to 1175843
[2025-06-04 10:29:00] 2025-06-04 14:28:41,558 | INFO     | did not find any defunct processes belonging to 1175843
[2025-06-04 10:29:00] 2025-06-04 14:28:41,558 | INFO     | ready for new job
[2025-06-04 10:29:00] 2025-06-04 14:28:41,558 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:29:00] 2025-06-04 14:28:41,559 | INFO     | **************************************
[2025-06-04 10:29:00] 2025-06-04 14:28:41,559 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:29:00] 2025-06-04 14:28:41,559 | INFO     | **************************************
[2025-06-04 10:29:00] 2025-06-04 14:28:41,559 | INFO     | 
[2025-06-04 10:29:00] 2025-06-04 14:28:41,574 | INFO     | architecture information:
[2025-06-04 10:29:00] 2025-06-04 14:28:41,574 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:29:00] 2025-06-04 14:28:41,584 | INFO     | cat /etc/os-release:
[2025-06-04 10:29:00] NAME="CentOS Linux"
[2025-06-04 10:29:00] VERSION="7 (Core)"
[2025-06-04 10:29:00] ID="centos"
[2025-06-04 10:29:00] ID_LIKE="rhel fedora"
[2025-06-04 10:29:00] VERSION_ID="7"
[2025-06-04 10:29:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:29:00] ANSI_COLOR="0;31"
[2025-06-04 10:29:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:29:00] HOME_URL="https://www.centos.org/"
[2025-06-04 10:29:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:29:00] 
[2025-06-04 10:29:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:29:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:29:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:29:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:29:00] 
[2025-06-04 10:29:00] 2025-06-04 14:28:41,585 | INFO     | **************************************
[2025-06-04 10:29:00] 2025-06-04 14:28:42,087 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 10:29:00] 2025-06-04 14:28:42,096 | INFO     | sufficient remaining disk space (76384567296 B)
[2025-06-04 10:29:00] 2025-06-04 14:28:42,096 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:29:00] 2025-06-04 14:28:42,096 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:29:00] 2025-06-04 14:28:42,096 | INFO     | update_server=False
[2025-06-04 10:29:00] 2025-06-04 14:28:42,096 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:29:00] 2025-06-04 14:28:42,097 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:29:00] 2025-06-04 14:28:42,097 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 10:29:00] 2025-06-04 14:28:42,097 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:29:00] 2025-06-04 14:28:42,097 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:29:00] 2025-06-04 14:28:42,098 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:29:00] 2025-06-04 14:28:42,116 | INFO     | all payload control threads have been joined
[2025-06-04 10:29:00] 2025-06-04 14:28:42,647 | INFO     | all job control threads have been joined
[2025-06-04 10:29:00] 2025-06-04 14:28:42,767 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:29:00] 2025-06-04 14:28:42,804 | INFO     | all data control threads have been joined
[2025-06-04 10:29:00] 2025-06-04 14:28:42,813 | WARNING  | process 1175843 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 10:29:00] 2025-06-04 14:28:42,931 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:29:00] 2025-06-04 14:28:42,931 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:29:00] 2025-06-04 14:28:42,932 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-6679182652/payload.stdout) since it has not been created yet
[2025-06-04 10:29:00] 2025-06-04 14:28:42,932 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 10:29:00] 2025-06-04 14:28:42,941 | INFO     | sufficient remaining disk space (76384567296 B)
[2025-06-04 10:29:00] 2025-06-04 14:28:42,942 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-06-04 10:29:00] 2025-06-04 14:28:42,942 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6679182652/HITS.45006595._055963.pool.root.1 since it does not exist
[2025-06-04 10:29:00] 2025-06-04 14:28:43,072 | INFO     | number of running child processes to parent process 1175843: 1
[2025-06-04 10:29:00] 2025-06-04 14:28:43,072 | INFO     | maximum number of monitored processes: 6
[2025-06-04 10:29:00] 2025-06-04 14:28:43,072 | INFO     | aborting job monitoring since job object (job id=6679182652) has expired
[2025-06-04 10:29:00] 2025-06-04 14:28:43,072 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:29:00] 2025-06-04 14:28:43,072 | INFO     | will abort loop
[2025-06-04 10:29:00] 2025-06-04 14:28:43,101 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:29:00] 2025-06-04 14:28:43,102 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:29:00] 2025-06-04 14:28:43,121 | INFO     | [payload] control thread has finished
[2025-06-04 10:29:00] 2025-06-04 14:28:43,148 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:29:00] 2025-06-04 14:28:43,311 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:29:00] 2025-06-04 14:28:43,388 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:29:00] 2025-06-04 14:28:43,542 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:29:00] 2025-06-04 14:28:43,653 | INFO     | [job] control thread has finished
[2025-06-04 10:29:00] 2025-06-04 14:28:43,810 | INFO     | [data] control thread has finished
[2025-06-04 10:29:00] 2025-06-04 14:28:43,847 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:29:00] 2025-06-04 14:28:44,077 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:29:00] 2025-06-04 14:28:44,269 | INFO     | [job] validate thread has finished
[2025-06-04 10:29:00] 2025-06-04 14:28:44,446 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:29:00] 2025-06-04 14:28:44,555 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:29:00] 2025-06-04 14:28:44,772 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:29:00] 2025-06-04 14:28:47,317 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:29:00] 2025-06-04 14:28:53,089 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:29:00] 2025-06-04 14:28:54,094 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:29:00] 2025-06-04 14:28:55,770 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140236211599168)>', '<ExcThread(monitor, started 140235446941440)>']
[2025-06-04 10:29:00] 2025-06-04 14:28:56,162 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:29:00] 2025-06-04 14:28:56,162 | INFO     | [monitor] control thread has ended
[2025-06-04 10:29:00] 2025-06-04 14:29:00,795 | INFO     | all workflow threads have been joined
[2025-06-04 10:29:00] 2025-06-04 14:29:00,795 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:29:00] 2025-06-04 14:29:00,796 | INFO     | traces error code: 0
[2025-06-04 10:29:00] 2025-06-04 14:29:00,796 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:29:00] 2025-06-04 14:29:00,884 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:29:00] 2025-06-04 14:29:00,887 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:29:00] 2025-06-04 14:29:00,889 [wrapper] pilotpid: 1169085
[2025-06-04 10:29:00] 2025-06-04 14:29:00,891 [wrapper] Pilot exit status: 0
[2025-06-04 10:29:00] 2025-06-04 14:29:00,898 [wrapper] pandaids: 6679182652
[2025-06-04 10:29:00] 2025-06-04 14:29:00,935 [wrapper] cleanup supervisor_pilot 1281648 1169086
[2025-06-04 10:29:00] 2025-06-04 14:29:00,937 [wrapper] Test setup, not cleaning
[2025-06-04 10:29:00] 2025-06-04 14:29:00,939 [wrapper] apfmon messages muted
[2025-06-04 10:29:00] 2025-06-04 14:29:00,941 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:29:00] 2025-06-04 14:29:00,943 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:29:00]  *** Error codes and diagnostics ***
[2025-06-04 10:29:00]     "exeErrorCode": 0,
[2025-06-04 10:29:00]     "exeErrorDiag": "",
[2025-06-04 10:29:00]     "pilotErrorCode": 0,
[2025-06-04 10:29:00]     "pilotErrorDiag": "",
[2025-06-04 10:29:00]  *** Listing of results directory ***
[2025-06-04 10:29:00] total 379400
[2025-06-04 10:29:00] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 10:29:00] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:51 queuedata.json
[2025-06-04 10:29:00] -rwx------. 1 boincer umatlas     37140 Jun  4 04:52 runpilot2-wrapper.sh
[2025-06-04 10:29:00] -rw-r--r--. 1 boincer umatlas       100 Jun  4 09:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:29:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 09:41 run_atlas
[2025-06-04 10:29:00] -rw-r--r--. 1 boincer umatlas       105 Jun  4 09:41 job.xml
[2025-06-04 10:29:00] -rw-r--r--. 2 boincer umatlas 212119937 Jun  4 09:41 EVNT.45006593._000939.pool.root.1
[2025-06-04 10:29:00] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:41 start_atlas.sh
[2025-06-04 10:29:00] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 09:41 shared
[2025-06-04 10:29:00] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 09:41 input.tar.gz
[2025-06-04 10:29:00] -rw-r--r--. 1 boincer umatlas         0 Jun  4 09:41 boinc_lockfile
[2025-06-04 10:29:00] -rw-r--r--. 1 boincer umatlas      2523 Jun  4 09:41 pandaJob.out
[2025-06-04 10:29:00] -rw-------. 1 boincer umatlas    986819 Jun  4 09:41 agis_schedconf.cvmfs.json
[2025-06-04 10:29:00] -rw-------. 1 boincer umatlas   1598969 Jun  4 09:41 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:29:00] drwx------. 4 boincer umatlas      4096 Jun  4 09:41 pilot3
[2025-06-04 10:29:00] -rw-r--r--. 1 boincer umatlas      6842 Jun  4 10:28 init_data.xml
[2025-06-04 10:29:00] -rw-------. 1 boincer umatlas 171279629 Jun  4 10:28 HITS.45006595._055963.pool.root.1
[2025-06-04 10:29:00] -rw-------. 1 boincer umatlas        95 Jun  4 10:28 pilot_heartbeat.json
[2025-06-04 10:29:00] -rw-r--r--. 1 boincer umatlas       529 Jun  4 10:28 boinc_task_state.xml
[2025-06-04 10:29:00] -rw-------. 1 boincer umatlas      1045 Jun  4 10:28 memory_monitor_summary.json
[2025-06-04 10:29:00] -rw-------. 1 boincer umatlas    333825 Jun  4 10:28 log.45006595._055963.job.log.tgz.1
[2025-06-04 10:29:00] -rw-------. 1 boincer umatlas      7711 Jun  4 10:28 heartbeat.json
[2025-06-04 10:29:00] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 10:28 boinc_mmap_file
[2025-06-04 10:29:00] -rw-r--r--. 1 boincer umatlas        27 Jun  4 10:28 wrapper_checkpoint.txt
[2025-06-04 10:29:00] -rw-------. 1 boincer umatlas      5827 Jun  4 10:29 pilotlog.txt
[2025-06-04 10:29:00] -rw-------. 1 boincer umatlas    301009 Jun  4 10:29 log.45006595._055963.job.log.1
[2025-06-04 10:29:00] -rw-------. 1 boincer umatlas       357 Jun  4 10:29 output.list
[2025-06-04 10:29:00] -rw-r--r--. 1 boincer umatlas       620 Jun  4 10:29 runtime_log
[2025-06-04 10:29:00] -rw-------. 1 boincer umatlas    655360 Jun  4 10:29 result.tar.gz
[2025-06-04 10:29:00] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 10:29 runtime_log.err
[2025-06-04 10:29:00] -rw-------. 1 boincer umatlas       651 Jun  4 10:29 3sKNDmz1yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtqnKDmKyRtHo.diag
[2025-06-04 10:29:00] -rw-r--r--. 1 boincer umatlas     21855 Jun  4 10:29 stderr.txt
[2025-06-04 10:29:00] HITS file was successfully produced:
[2025-06-04 10:29:01] -rw-------. 1 boincer umatlas 171279629 Jun  4 10:28 shared/HITS.pool.root.1
[2025-06-04 10:29:01]  *** Contents of shared directory: ***
[2025-06-04 10:29:01] total 375584
[2025-06-04 10:29:01] -rw-r--r--. 2 boincer umatlas 212119937 Jun  4 09:41 ATLAS.root_0
[2025-06-04 10:29:01] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:41 start_atlas.sh
[2025-06-04 10:29:01] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 09:41 input.tar.gz
[2025-06-04 10:29:01] -rw-------. 1 boincer umatlas 171279629 Jun  4 10:28 HITS.pool.root.1
[2025-06-04 10:29:01] -rw-------. 1 boincer umatlas    655360 Jun  4 10:29 result.tar.gz
10:29:02 (1165203): run_atlas exited; CPU time 25792.046946
10:29:02 (1165203): called boinc_finish(0)

</stderr_txt>
]]>

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