Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:54:01 (45630): wrapper (7.7.26015): starting
08:54:01 (45630): wrapper: running run_atlas (--nthreads 9)
[2025-06-04 08:54:01] Arguments: --nthreads 9
[2025-06-04 08:54:01] Threads: 9
[2025-06-04 08:54:01] Checking for CVMFS
[2025-06-04 08:54:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:54:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:54:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:54:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:54:02] 2.11.2.0 5225 28809 234260 146780 1 258 11933710 18432001 9097 130560 0 57638627 99.409 70612776 29458 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 08:54:02] CVMFS is ok
[2025-06-04 08:54:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:54:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:54:02] Further information can be found at the LHC@home message board.
[2025-06-04 08:54:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:54:02] Checking for apptainer binary...
[2025-06-04 08:54:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:54:02] Running /usr/bin/apptainer --version
[2025-06-04 08:54:02] apptainer version 1.3.2-1.el7
[2025-06-04 08:54:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:54:03] c-210-33-2.aglt2.org
[2025-06-04 08:54:03] apptainer works
[2025-06-04 08:54:03] Set ATHENA_PROC_NUMBER=9
[2025-06-04 08:54:03] Set ATHENA_CORE_NUMBER=9
[2025-06-04 08:54:03] Starting ATLAS job with PandaID=6679100399
[2025-06-04 08:54:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:32:36]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:32:36]  protocol_id=None
[2025-06-04 10:32:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:32:36]  replicas=None
[2025-06-04 10:32:36]  scope=mc23_13p6TeV
[2025-06-04 10:32:36]  status=None
[2025-06-04 10:32:36]  status_code=0
[2025-06-04 10:32:36]  storage_token=
[2025-06-04 10:32:36]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6679100399/log.45006595._055851.job.log.tgz.1
[2025-06-04 10:32:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/d2/log.45006595._055851.job.log.tgz.1
[2025-06-04 10:32:36]  workdir=None
[2025-06-04 10:32:36] ]
[2025-06-04 10:32:36] 2025-06-04 14:32:06,184 | INFO     | transferring file log.45006595._055851.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6679100399/log.45006595._055851.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:32:36] 2025-06-04 14:32:06,185 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6679100399/log.45006595._055851.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._055851.job
[2025-06-04 10:32:36] 2025-06-04 14:32:06,205 | INFO     | adding to output.list: log.45006595._055851.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/d2/log.45006595._055851.job.log.tg
[2025-06-04 10:32:36] 2025-06-04 14:32:06,206 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:32:36] 2025-06-04 14:32:06,207 | INFO     | summary of transferred files:
[2025-06-04 10:32:36] 2025-06-04 14:32:06,207 | INFO     |  -- lfn=log.45006595._055851.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:32:36] 2025-06-04 14:32:06,207 | INFO     | stage-out finished correctly
[2025-06-04 10:32:36] 2025-06-04 14:32:08,078 | INFO     | monitor loop #432: job 0:6679100399 is in state 'finished'
[2025-06-04 10:32:36] 2025-06-04 14:32:08,078 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:32:36] 2025-06-04 14:32:09,692 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:32:36] 2025-06-04 14:32:10,333 | INFO     | job 6679100399 has state=finished
[2025-06-04 10:32:36] 2025-06-04 14:32:10,334 | INFO     | preparing for final server update for job 6679100399 in state='finished'
[2025-06-04 10:32:36] 2025-06-04 14:32:10,334 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:32:36] 2025-06-04 14:32:10,335 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:32:36] 2025-06-04 14:32:10,335 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:32:36] 2025-06-04 14:32:10,335 | INFO     | job 6679100399 has finished - writing final server update
[2025-06-04 10:32:36] 2025-06-04 14:32:10,335 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:32:36] 2025-06-04 14:32:10,342 | INFO     | executing command: lscpu
[2025-06-04 10:32:36] 2025-06-04 14:32:10,392 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:32:36] 2025-06-04 14:32:10,582 | INFO     | monitor loop #433: job 0:6679100399 is in state 'finished'
[2025-06-04 10:32:36] 2025-06-04 14:32:10,583 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:32:36] 2025-06-04 14:32:13,087 | INFO     | monitor loop #434: job 0:6679100399 is in state 'finished'
[2025-06-04 10:32:36] 2025-06-04 14:32:13,087 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:32:36] 2025-06-04 14:32:15,592 | INFO     | monitor loop #435: job 0:6679100399 is in state 'finished'
[2025-06-04 10:32:36] 2025-06-04 14:32:15,736 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:32:36] 2025-06-04 14:32:17,048 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 10:32:36] 2025-06-04 14:32:17,049 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6679100399/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:32:36] 2025-06-04 14:32:17,050 | INFO     | extracted standard info from prmon json
[2025-06-04 10:32:36] 2025-06-04 14:32:17,051 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:32:36] 2025-06-04 14:32:17,051 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:32:36] 2025-06-04 14:32:17,051 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:32:36] 2025-06-04 14:32:17,052 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:32:36] 2025-06-04 14:32:17,057 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:32:36] 2025-06-04 14:32:17,057 | INFO     | sum of square deviations: 218571540.0
[2025-06-04 10:32:36] 2025-06-04 14:32:17,058 | INFO     | sum of deviations: -2447362395.0
[2025-06-04 10:32:36] 2025-06-04 14:32:17,058 | INFO     | mean x: 1749044687.0
[2025-06-04 10:32:36] 2025-06-04 14:32:17,058 | INFO     | mean y: 2546452.7528089886
[2025-06-04 10:32:36] 2025-06-04 14:32:17,059 | INFO     | -- intersect: 19586734742.492382
[2025-06-04 10:32:36] 2025-06-04 14:32:17,059 | INFO     | intersect: 19586734742.492382
[2025-06-04 10:32:36] 2025-06-04 14:32:17,059 | INFO     | chi2: 0.03288158802718977
[2025-06-04 10:32:36] 2025-06-04 14:32:17,059 | INFO     | -- intersect: 19586734742.492382
[2025-06-04 10:32:36] 2025-06-04 14:32:17,059 | INFO     | current memory leak: -11.20 B/s (using 89 data points, chi2=0.03)
[2025-06-04 10:32:36] 2025-06-04 14:32:17,060 | INFO     | ..............................
[2025-06-04 10:32:36] 2025-06-04 14:32:17,060 | INFO     | . Timing measurements:
[2025-06-04 10:32:36] 2025-06-04 14:32:17,060 | INFO     | . get job = 0 s
[2025-06-04 10:32:36] 2025-06-04 14:32:17,060 | INFO     | . initial setup = 2 s
[2025-06-04 10:32:36] 2025-06-04 14:32:17,060 | INFO     | . payload setup = 10 s
[2025-06-04 10:32:36] 2025-06-04 14:32:17,060 | INFO     | . stage-in = 0 s
[2025-06-04 10:32:36] 2025-06-04 14:32:17,060 | INFO     | . payload execution = 5832 s
[2025-06-04 10:32:36] 2025-06-04 14:32:17,060 | INFO     | . stage-out = 0 s
[2025-06-04 10:32:36] 2025-06-04 14:32:17,060 | INFO     | . log creation = 0 s
[2025-06-04 10:32:36] 2025-06-04 14:32:17,060 | INFO     | ..............................
[2025-06-04 10:32:36] 2025-06-04 14:32:17,141 | INFO     | 
[2025-06-04 10:32:36] 2025-06-04 14:32:17,141 | INFO     | job summary report
[2025-06-04 10:32:36] 2025-06-04 14:32:17,141 | INFO     | --------------------------------------------------
[2025-06-04 10:32:36] 2025-06-04 14:32:17,141 | INFO     | PanDA job id: 6679100399
[2025-06-04 10:32:36] 2025-06-04 14:32:17,141 | INFO     | task id: 45006595
[2025-06-04 10:32:36] 2025-06-04 14:32:17,141 | INFO     | errors: (none)
[2025-06-04 10:32:36] 2025-06-04 14:32:17,141 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:32:36] 2025-06-04 14:32:17,141 | INFO     | pilot state: finished 
[2025-06-04 10:32:36] 2025-06-04 14:32:17,141 | INFO     | transexitcode: 0
[2025-06-04 10:32:36] 2025-06-04 14:32:17,142 | INFO     | exeerrorcode: 0
[2025-06-04 10:32:36] 2025-06-04 14:32:17,142 | INFO     | exeerrordiag: 
[2025-06-04 10:32:36] 2025-06-04 14:32:17,142 | INFO     | exitcode: 0
[2025-06-04 10:32:36] 2025-06-04 14:32:17,142 | INFO     | exitmsg: OK
[2025-06-04 10:32:36] 2025-06-04 14:32:17,142 | INFO     | cpuconsumptiontime: 33877 s
[2025-06-04 10:32:36] 2025-06-04 14:32:17,142 | INFO     | nevents: 400
[2025-06-04 10:32:36] 2025-06-04 14:32:17,142 | INFO     | neventsw: 0
[2025-06-04 10:32:36] 2025-06-04 14:32:17,142 | INFO     | pid: 57782
[2025-06-04 10:32:36] 2025-06-04 14:32:17,142 | INFO     | pgrp: 57782
[2025-06-04 10:32:36] 2025-06-04 14:32:17,142 | INFO     | corecount: 9
[2025-06-04 10:32:36] 2025-06-04 14:32:17,142 | INFO     | event service: False
[2025-06-04 10:32:36] 2025-06-04 14:32:17,142 | INFO     | sizes: {0: 2397070, 1: 2397269, 6: 2397475, 11: 2397503, 5846: 2424044, 5848: 2432985, 5852: 2433169, 5859: 2433339}
[2025-06-04 10:32:36] 2025-06-04 14:32:17,142 | INFO     | --------------------------------------------------
[2025-06-04 10:32:36] 2025-06-04 14:32:17,142 | INFO     | 
[2025-06-04 10:32:36] 2025-06-04 14:32:17,142 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 10:32:36] 2025-06-04 14:32:17,162 | INFO     | 5880s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 10:32:36] 2025-06-04 14:32:17,166 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:32:36] 2025-06-04 14:32:17,166 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:32:36] 2025-06-04 14:32:17,166 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:32:36] 2025-06-04 14:32:17,166 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:32:36] 2025-06-04 14:32:17,166 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:32:36] 2025-06-04 14:32:17,166 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:32:36] 2025-06-04 14:32:17,166 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:32:36] 2025-06-04 14:32:17,166 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:32:36] 2025-06-04 14:32:17,166 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:32:36] 2025-06-04 14:32:17,166 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:32:36] 2025-06-04 14:32:17,166 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:32:36] 2025-06-04 14:32:17,166 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:32:36] 2025-06-04 14:32:17,167 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:32:36] 2025-06-04 14:32:17,167 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:32:36] 2025-06-04 14:32:17,167 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:32:36] 2025-06-04 14:32:17,167 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:32:36] 2025-06-04 14:32:17,167 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:32:36] 2025-06-04 14:32:17,167 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:32:36] 2025-06-04 14:32:17,167 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:32:36] 2025-06-04 14:32:17,167 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:32:36] 2025-06-04 14:32:17,167 | INFO     | job 6679100399 has completed (purged errors)
[2025-06-04 10:32:36] 2025-06-04 14:32:17,167 | INFO     | overall cleanup function is called
[2025-06-04 10:32:36] 2025-06-04 14:32:18,175 | INFO     | --- collectZombieJob: --- 10, [57782]
[2025-06-04 10:32:36] 2025-06-04 14:32:18,175 | INFO     | zombie collector waiting for pid 57782
[2025-06-04 10:32:36] 2025-06-04 14:32:18,175 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:32:36] 2025-06-04 14:32:18,176 | INFO     | collected zombie processes
[2025-06-04 10:32:36] 2025-06-04 14:32:18,176 | INFO     | will attempt to kill all subprocesses of pid=57782
[2025-06-04 10:32:36] 2025-06-04 14:32:18,584 | INFO     | PID=49322 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 10:32:36] 2025-06-04 14:32:18,584 | INFO     | .. there are 10 such processes running
[2025-06-04 10:32:36] 2025-06-04 14:32:18,602 | INFO     | process IDs to be killed: [57782] (in reverse order)
[2025-06-04 10:32:36] 2025-06-04 14:32:18,666 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:32:36] 2025-06-04 14:32:18,666 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:32:36] 2025-06-04 14:32:18,671 | INFO     | did not find any defunct processes belonging to 57782
[2025-06-04 10:32:36] 2025-06-04 14:32:18,676 | INFO     | did not find any defunct processes belonging to 57782
[2025-06-04 10:32:36] 2025-06-04 14:32:18,676 | INFO     | ready for new job
[2025-06-04 10:32:36] 2025-06-04 14:32:18,676 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:32:36] 2025-06-04 14:32:18,677 | INFO     | **************************************
[2025-06-04 10:32:36] 2025-06-04 14:32:18,677 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:32:36] 2025-06-04 14:32:18,677 | INFO     | **************************************
[2025-06-04 10:32:36] 2025-06-04 14:32:18,677 | INFO     | 
[2025-06-04 10:32:36] 2025-06-04 14:32:18,679 | INFO     | architecture information:
[2025-06-04 10:32:36] 2025-06-04 14:32:18,680 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:32:36] 2025-06-04 14:32:18,777 | INFO     | cat /etc/os-release:
[2025-06-04 10:32:36] NAME="CentOS Linux"
[2025-06-04 10:32:36] VERSION="7 (Core)"
[2025-06-04 10:32:36] ID="centos"
[2025-06-04 10:32:36] ID_LIKE="rhel fedora"
[2025-06-04 10:32:36] VERSION_ID="7"
[2025-06-04 10:32:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:32:36] ANSI_COLOR="0;31"
[2025-06-04 10:32:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:32:36] HOME_URL="https://www.centos.org/"
[2025-06-04 10:32:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:32:36] 
[2025-06-04 10:32:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:32:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:32:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:32:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:32:36] 
[2025-06-04 10:32:36] 2025-06-04 14:32:18,777 | INFO     | **************************************
[2025-06-04 10:32:36] 2025-06-04 14:32:19,280 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 10:32:36] 2025-06-04 14:32:19,406 | INFO     | sufficient remaining disk space (56589549568 B)
[2025-06-04 10:32:36] 2025-06-04 14:32:19,406 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:32:36] 2025-06-04 14:32:19,406 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:32:36] 2025-06-04 14:32:19,407 | INFO     | update_server=False
[2025-06-04 10:32:36] 2025-06-04 14:32:19,407 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:32:36] 2025-06-04 14:32:19,407 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:32:36] 2025-06-04 14:32:19,407 | INFO     | aborting loop
[2025-06-04 10:32:36] 2025-06-04 14:32:19,407 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 10:32:36] 2025-06-04 14:32:19,408 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:32:36] 2025-06-04 14:32:19,408 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:32:36] 2025-06-04 14:32:19,408 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:32:36] 2025-06-04 14:32:19,408 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:32:36] 2025-06-04 14:32:19,535 | INFO     | all job control threads have been joined
[2025-06-04 10:32:36] 2025-06-04 14:32:19,959 | INFO     | all data control threads have been joined
[2025-06-04 10:32:36] 2025-06-04 14:32:20,216 | INFO     | all payload control threads have been joined
[2025-06-04 10:32:36] 2025-06-04 14:32:20,275 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:32:36] 2025-06-04 14:32:20,411 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:32:36] 2025-06-04 14:32:20,412 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:32:36] 2025-06-04 14:32:20,541 | INFO     | [job] control thread has finished
[2025-06-04 10:32:36] 2025-06-04 14:32:20,695 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:32:36] 2025-06-04 14:32:20,937 | INFO     | [job] validate thread has finished
[2025-06-04 10:32:36] 2025-06-04 14:32:20,964 | INFO     | [data] control thread has finished
[2025-06-04 10:32:36] 2025-06-04 14:32:20,978 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:32:36] 2025-06-04 14:32:21,000 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:32:36] 2025-06-04 14:32:21,183 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:32:36] 2025-06-04 14:32:21,222 | INFO     | [payload] control thread has finished
[2025-06-04 10:32:36] 2025-06-04 14:32:21,413 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:32:36] 2025-06-04 14:32:21,591 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:32:36] 2025-06-04 14:32:21,591 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:32:36] 2025-06-04 14:32:22,152 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:32:36] 2025-06-04 14:32:23,158 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:32:36] 2025-06-04 14:32:24,280 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:32:36] 2025-06-04 14:32:29,883 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:32:36] 2025-06-04 14:32:30,890 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:32:36] 2025-06-04 14:32:31,254 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140451242592064)>', '<ExcThread(monitor, started 140451015702272)>']
[2025-06-04 10:32:36] 2025-06-04 14:32:31,466 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:32:36] 2025-06-04 14:32:31,466 | INFO     | [monitor] control thread has ended
[2025-06-04 10:32:36] 2025-06-04 14:32:36,280 | INFO     | all workflow threads have been joined
[2025-06-04 10:32:36] 2025-06-04 14:32:36,280 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:32:36] 2025-06-04 14:32:36,281 | INFO     | traces error code: 0
[2025-06-04 10:32:36] 2025-06-04 14:32:36,281 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:32:36] 2025-06-04 14:32:36,437 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:32:36] 2025-06-04 14:32:36,439 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:32:36] 2025-06-04 14:32:36,442 [wrapper] pilotpid: 49322
[2025-06-04 10:32:36] 2025-06-04 14:32:36,445 [wrapper] Pilot exit status: 0
[2025-06-04 10:32:36] 2025-06-04 14:32:36,457 [wrapper] pandaids: 6679100399
[2025-06-04 10:32:36] 2025-06-04 14:32:36,511 [wrapper] cleanup supervisor_pilot 206739 49323
[2025-06-04 10:32:36] 2025-06-04 14:32:36,514 [wrapper] Test setup, not cleaning
[2025-06-04 10:32:36] 2025-06-04 14:32:36,517 [wrapper] apfmon messages muted
[2025-06-04 10:32:36] 2025-06-04 14:32:36,520 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:32:36] 2025-06-04 14:32:36,523 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:32:36]  *** Error codes and diagnostics ***
[2025-06-04 10:32:36]     "exeErrorCode": 0,
[2025-06-04 10:32:36]     "exeErrorDiag": "",
[2025-06-04 10:32:36]     "pilotErrorCode": 0,
[2025-06-04 10:32:36]     "pilotErrorDiag": "",
[2025-06-04 10:32:36]  *** Listing of results directory ***
[2025-06-04 10:32:36] total 391564
[2025-06-04 10:32:36] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 10:32:36] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 04:48 queuedata.json
[2025-06-04 10:32:36] -rwx------ 1 boincer umatlas     37140 Jun  4 04:48 runpilot2-wrapper.sh
[2025-06-04 10:32:36] -rw-r--r-- 1 boincer umatlas       100 Jun  4 08:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:32:36] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 08:54 run_atlas
[2025-06-04 10:32:36] -rw-r--r-- 1 boincer umatlas       105 Jun  4 08:54 job.xml
[2025-06-04 10:32:36] -rw-r--r-- 2 boincer umatlas 215429284 Jun  4 08:54 EVNT.45006593._001384.pool.root.1
[2025-06-04 10:32:36] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:54 start_atlas.sh
[2025-06-04 10:32:36] drwxrwx--x 2 boincer umatlas      4096 Jun  4 08:54 shared
[2025-06-04 10:32:36] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 08:54 input.tar.gz
[2025-06-04 10:32:36] -rw-r--r-- 1 boincer umatlas         0 Jun  4 08:54 boinc_lockfile
[2025-06-04 10:32:36] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 08:54 pandaJob.out
[2025-06-04 10:32:36] -rw------- 1 boincer umatlas    986811 Jun  4 08:54 agis_schedconf.cvmfs.json
[2025-06-04 10:32:36] -rw------- 1 boincer umatlas   1598969 Jun  4 08:54 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:32:36] drwx------ 4 boincer umatlas      4096 Jun  4 08:54 pilot3
[2025-06-04 10:32:36] -rw-r--r-- 1 boincer umatlas      6269 Jun  4 10:27 init_data.xml
[2025-06-04 10:32:36] -rw------- 1 boincer umatlas 179832087 Jun  4 10:31 HITS.45006595._055851.pool.root.1
[2025-06-04 10:32:36] -rw-r--r-- 1 boincer umatlas       529 Jun  4 10:31 boinc_task_state.xml
[2025-06-04 10:32:36] -rw------- 1 boincer umatlas      1051 Jun  4 10:32 memory_monitor_summary.json
[2025-06-04 10:32:36] -rw------- 1 boincer umatlas    341938 Jun  4 10:32 log.45006595._055851.job.log.tgz.1
[2025-06-04 10:32:36] -rw------- 1 boincer umatlas        95 Jun  4 10:32 pilot_heartbeat.json
[2025-06-04 10:32:36] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 10:32 boinc_mmap_file
[2025-06-04 10:32:36] -rw-r--r-- 1 boincer umatlas        27 Jun  4 10:32 wrapper_checkpoint.txt
[2025-06-04 10:32:36] -rw------- 1 boincer umatlas      7745 Jun  4 10:32 heartbeat.json
[2025-06-04 10:32:36] -rw------- 1 boincer umatlas      4548 Jun  4 10:32 pilotlog.txt
[2025-06-04 10:32:36] -rw------- 1 boincer umatlas    591874 Jun  4 10:32 log.45006595._055851.job.log.1
[2025-06-04 10:32:36] -rw------- 1 boincer umatlas       357 Jun  4 10:32 output.list
[2025-06-04 10:32:36] -rw-r--r-- 1 boincer umatlas       620 Jun  4 10:32 runtime_log
[2025-06-04 10:32:36] -rw------- 1 boincer umatlas    952320 Jun  4 10:32 result.tar.gz
[2025-06-04 10:32:36] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 10:32 runtime_log.err
[2025-06-04 10:32:36] -rw------- 1 boincer umatlas       658 Jun  4 10:32 9l8MDm3yyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLpnKDm0CD06n.diag
[2025-06-04 10:32:36] -rw-r--r-- 1 boincer umatlas     21817 Jun  4 10:32 stderr.txt
[2025-06-04 10:32:36] HITS file was successfully produced:
[2025-06-04 10:32:36] -rw------- 1 boincer umatlas 179832087 Jun  4 10:31 shared/HITS.pool.root.1
[2025-06-04 10:32:36]  *** Contents of shared directory: ***
[2025-06-04 10:32:36] total 387456
[2025-06-04 10:32:36] -rw-r--r-- 2 boincer umatlas 215429284 Jun  4 08:54 ATLAS.root_0
[2025-06-04 10:32:36] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:54 start_atlas.sh
[2025-06-04 10:32:36] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 08:54 input.tar.gz
[2025-06-04 10:32:36] -rw------- 1 boincer umatlas 179832087 Jun  4 10:31 HITS.pool.root.1
[2025-06-04 10:32:36] -rw------- 1 boincer umatlas    952320 Jun  4 10:32 result.tar.gz
10:32:38 (45630): run_atlas exited; CPU time 33952.398751
10:32:38 (45630): called boinc_finish(0)

</stderr_txt>
]]>

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