Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:03:07 (1144): wrapper (7.7.26015): starting
23:03:07 (1144): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 23:03:07] Arguments: --nthreads 8
[2025-06-04 23:03:07] Threads: 8
[2025-06-04 23:03:07] Checking for CVMFS
[2025-06-04 23:03:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 23:03:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 23:03:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 23:03:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 23:03:09] 2.11.2.0 6428 33711 94468 146793 3 59 18417256 25165825 3910 130560 0 18531110 99.854 19242725 2120 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 23:03:09] CVMFS is ok
[2025-06-04 23:03:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 23:03:09] Checking for apptainer binary...
[2025-06-04 23:03:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 23:03:09] Running /usr/bin/apptainer --version
[2025-06-04 23:03:10] apptainer version 1.3.2-1.el7
[2025-06-04 23:03:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 23:03:18] cg-vwn335.simple-grid.lan
[2025-06-04 23:03:18] apptainer works
[2025-06-04 23:03:18] Set ATHENA_PROC_NUMBER=8
[2025-06-04 23:03:18] Set ATHENA_CORE_NUMBER=8
[2025-06-04 23:03:18] Starting ATLAS job with PandaID=6679235623
[2025-06-04 23:03:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 03:08:49]  *** The last 200 lines of the pilot log: ***
[2025-06-05 03:08:49] 2025-06-05 00:53:30,304 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6679235623/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 03:08:49] 2025-06-05 00:53:30,305 | INFO     | extracted standard info from prmon json
[2025-06-05 03:08:49] 2025-06-05 00:53:30,305 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 03:08:49] 2025-06-05 00:53:30,305 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 03:08:49] 2025-06-05 00:53:30,305 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 03:08:49] 2025-06-05 00:53:30,305 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 03:08:49] 2025-06-05 00:53:30,311 | INFO     | fitting pss+swap vs Time
[2025-06-05 03:08:49] 2025-06-05 00:53:30,311 | INFO     | sum of square deviations: 3038856977.5
[2025-06-05 03:08:49] 2025-06-05 00:53:30,313 | INFO     | sum of deviations: 39387603619.999954
[2025-06-05 03:08:49] 2025-06-05 00:53:30,313 | INFO     | mean x: 1749078193.5
[2025-06-05 03:08:49] 2025-06-05 00:53:30,313 | INFO     | mean y: 2455790.570093458
[2025-06-05 03:08:49] 2025-06-05 00:53:30,314 | INFO     | -- intersect: -22667909776.498974
[2025-06-05 03:08:49] 2025-06-05 00:53:30,314 | INFO     | intersect: -22667909776.498974
[2025-06-05 03:08:49] 2025-06-05 00:53:30,314 | INFO     | chi2: 7.0311363300309795
[2025-06-05 03:08:49] 2025-06-05 00:53:30,314 | INFO     | sum of square deviations: 2830787960.0
[2025-06-05 03:08:49] 2025-06-05 00:53:30,316 | INFO     | sum of deviations: 52717215527.99998
[2025-06-05 03:08:49] 2025-06-05 00:53:30,316 | INFO     | mean x: 1749078041.0
[2025-06-05 03:08:49] 2025-06-05 00:53:30,316 | INFO     | mean y: 2465364.827751196
[2025-06-05 03:08:49] 2025-06-05 00:53:30,316 | INFO     | -- intersect: -32570275993.973625
[2025-06-05 03:08:49] 2025-06-05 00:53:30,317 | INFO     | intersect: -32570275993.973625
[2025-06-05 03:08:49] 2025-06-05 00:53:30,317 | INFO     | chi2: 6.333439752065308
[2025-06-05 03:08:49] 2025-06-05 00:53:30,317 | INFO     | current chi2=6.333439752065308 (change=9.922956193947066 %)
[2025-06-05 03:08:49] 2025-06-05 00:53:30,317 | INFO     | right removable region: 208
[2025-06-05 03:08:49] 2025-06-05 00:53:30,317 | INFO     | sum of square deviations: 2830787960.0
[2025-06-05 03:08:49] 2025-06-05 00:53:30,319 | INFO     | sum of deviations: -35388920090.99997
[2025-06-05 03:08:49] 2025-06-05 00:53:30,319 | INFO     | mean x: 1749078346.0
[2025-06-05 03:08:49] 2025-06-05 00:53:30,319 | INFO     | mean y: 2510549.966507177
[2025-06-05 03:08:49] 2025-06-05 00:53:30,319 | INFO     | -- intersect: 21868504998.9087
[2025-06-05 03:08:49] 2025-06-05 00:53:30,319 | INFO     | intersect: 21868504998.9087
[2025-06-05 03:08:49] 2025-06-05 00:53:30,320 | INFO     | chi2: 2.1034059025261067
[2025-06-05 03:08:49] 2025-06-05 00:53:30,320 | INFO     | current chi2=2.1034059025261067 (change=70.08441020348074 %)
[2025-06-05 03:08:49] 2025-06-05 00:53:30,320 | INFO     | sum of square deviations: 2632440055.0
[2025-06-05 03:08:49] 2025-06-05 00:53:30,322 | INFO     | sum of deviations: -67120274783.5
[2025-06-05 03:08:49] 2025-06-05 00:53:30,322 | INFO     | mean x: 1749078498.5
[2025-06-05 03:08:49] 2025-06-05 00:53:30,322 | INFO     | mean y: 2534787.1715686275
[2025-06-05 03:08:49] 2025-06-05 00:53:30,322 | INFO     | -- intersect: 44599420940.09541
[2025-06-05 03:08:49] 2025-06-05 00:53:30,322 | INFO     | intersect: 44599420940.09541
[2025-06-05 03:08:49] 2025-06-05 00:53:30,323 | INFO     | chi2: 1.0044632842912775
[2025-06-05 03:08:49] 2025-06-05 00:53:30,323 | INFO     | current chi2=1.0044632842912775 (change=52.24586547537224 %)
[2025-06-05 03:08:49] 2025-06-05 00:53:30,323 | INFO     | sum of square deviations: 2443580700.0
[2025-06-05 03:08:49] 2025-06-05 00:53:30,325 | INFO     | sum of deviations: -66093444428.999985
[2025-06-05 03:08:49] 2025-06-05 00:53:30,325 | INFO     | mean x: 1749078651.0
[2025-06-05 03:08:49] 2025-06-05 00:53:30,325 | INFO     | mean y: 2533915.165829146
[2025-06-05 03:08:49] 2025-06-05 00:53:30,325 | INFO     | -- intersect: 47311236517.79269
[2025-06-05 03:08:49] 2025-06-05 00:53:30,325 | INFO     | intersect: 47311236517.79269
[2025-06-05 03:08:49] 2025-06-05 00:53:30,326 | INFO     | chi2: 0.9853777944447923
[2025-06-05 03:08:49] 2025-06-05 00:53:30,326 | INFO     | current chi2=0.9853777944447923 (change=1.9000684390322324 %)
[2025-06-05 03:08:49] 2025-06-05 00:53:30,326 | INFO     | left removable region: 30
[2025-06-05 03:08:49] 2025-06-05 00:53:30,326 | INFO     | sum of square deviations: 1748737904.5
[2025-06-05 03:08:49] 2025-06-05 00:53:30,328 | INFO     | sum of deviations: -33621091657.00001
[2025-06-05 03:08:49] 2025-06-05 00:53:30,328 | INFO     | mean x: 1749078925.5
[2025-06-05 03:08:49] 2025-06-05 00:53:30,328 | INFO     | mean y: 2529855.438202247
[2025-06-05 03:08:49] 2025-06-05 00:53:30,328 | INFO     | -- intersect: 33630177954.2403
[2025-06-05 03:08:49] 2025-06-05 00:53:30,328 | INFO     | intersect: 33630177954.2403
[2025-06-05 03:08:49] 2025-06-05 00:53:30,329 | INFO     | chi2: 0.1761670243319949
[2025-06-05 03:08:49] 2025-06-05 00:53:30,329 | INFO     | -- intersect: 33630177954.2403
[2025-06-05 03:08:49] 2025-06-05 00:53:30,329 | INFO     | current memory leak: -19.23 B/s (using 178 data points, chi2=0.18)
[2025-06-05 03:08:49] 2025-06-05 00:53:30,330 | INFO     | ..............................
[2025-06-05 03:08:49] 2025-06-05 00:53:30,330 | INFO     | . Timing measurements:
[2025-06-05 03:08:49] 2025-06-05 00:53:30,330 | INFO     | . get job = 0 s
[2025-06-05 03:08:49] 2025-06-05 00:53:30,330 | INFO     | . initial setup = 6 s
[2025-06-05 03:08:49] 2025-06-05 00:53:30,331 | INFO     | . payload setup = 164 s
[2025-06-05 03:08:49] 2025-06-05 00:53:30,331 | INFO     | . stage-in = 0 s
[2025-06-05 03:08:49] 2025-06-05 00:53:30,331 | INFO     | . payload execution = 13167 s
[2025-06-05 03:08:49] 2025-06-05 00:53:30,331 | INFO     | . stage-out = 3 s
[2025-06-05 03:08:49] 2025-06-05 00:53:30,331 | INFO     | . log creation = 1 s
[2025-06-05 03:08:49] 2025-06-05 00:53:30,331 | INFO     | ..............................
[2025-06-05 03:08:49] 2025-06-05 00:53:30,484 | INFO     | 
[2025-06-05 03:08:49] 2025-06-05 00:53:30,484 | INFO     | job summary report
[2025-06-05 03:08:49] 2025-06-05 00:53:30,484 | INFO     | --------------------------------------------------
[2025-06-05 03:08:49] 2025-06-05 00:53:30,485 | INFO     | PanDA job id: 6679235623
[2025-06-05 03:08:49] 2025-06-05 00:53:30,485 | INFO     | task id: 45006595
[2025-06-05 03:08:49] 2025-06-05 00:53:30,485 | INFO     | errors: (none)
[2025-06-05 03:08:49] 2025-06-05 00:53:30,485 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 03:08:49] 2025-06-05 00:53:30,485 | INFO     | pilot state: finished 
[2025-06-05 03:08:49] 2025-06-05 00:53:30,485 | INFO     | transexitcode: 0
[2025-06-05 03:08:49] 2025-06-05 00:53:30,485 | INFO     | exeerrorcode: 0
[2025-06-05 03:08:49] 2025-06-05 00:53:30,485 | INFO     | exeerrordiag: 
[2025-06-05 03:08:49] 2025-06-05 00:53:30,485 | INFO     | exitcode: 0
[2025-06-05 03:08:49] 2025-06-05 00:53:30,485 | INFO     | exitmsg: OK
[2025-06-05 03:08:49] 2025-06-05 00:53:30,486 | INFO     | cpuconsumptiontime: 48716 s
[2025-06-05 03:08:49] 2025-06-05 00:53:30,486 | INFO     | nevents: 400
[2025-06-05 03:08:49] 2025-06-05 00:53:30,486 | INFO     | neventsw: 0
[2025-06-05 03:08:49] 2025-06-05 00:53:30,486 | INFO     | pid: 16461
[2025-06-05 03:08:49] 2025-06-05 00:53:30,486 | INFO     | pgrp: 16461
[2025-06-05 03:08:49] 2025-06-05 00:53:30,486 | INFO     | corecount: 8
[2025-06-05 03:08:49] 2025-06-05 00:53:30,486 | INFO     | event service: False
[2025-06-05 03:08:49] 2025-06-05 00:53:30,486 | INFO     | sizes: {0: 2397119, 1: 2397318, 12: 2397318, 23: 2397346, 33: 2397374, 44: 2397430, 55: 2397586, 66: 2397614, 76: 2397642, 87: 2397698, 91: 2397932, 98: 2398240, 1
[2025-06-05 03:08:49] 2025-06-05 00:53:30,486 | INFO     | --------------------------------------------------
[2025-06-05 03:08:49] 2025-06-05 00:53:30,486 | INFO     | 
[2025-06-05 03:08:49] 2025-06-05 00:53:30,486 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-05 03:08:49] 2025-06-05 00:53:30,966 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 03:08:49] 2025-06-05 00:53:30,966 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 03:08:49] 2025-06-05 00:53:30,966 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 03:08:49] 2025-06-05 00:53:30,967 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 03:08:49] 2025-06-05 00:53:30,967 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 03:08:49] 2025-06-05 00:53:30,967 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 03:08:49] 2025-06-05 00:53:30,967 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 03:08:49] 2025-06-05 00:53:30,967 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 03:08:49] 2025-06-05 00:53:30,967 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 03:08:49] 2025-06-05 00:53:30,967 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 03:08:49] 2025-06-05 00:53:30,967 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 03:08:49] 2025-06-05 00:53:30,967 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 03:08:49] 2025-06-05 00:53:30,967 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 03:08:49] 2025-06-05 00:53:30,968 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 03:08:49] 2025-06-05 00:53:30,968 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 03:08:49] 2025-06-05 00:53:30,968 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 03:08:49] 2025-06-05 00:53:30,968 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 03:08:49] 2025-06-05 00:53:30,968 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 03:08:49] 2025-06-05 00:53:30,968 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 03:08:49] 2025-06-05 00:53:30,968 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 03:08:49] 2025-06-05 00:53:30,968 | INFO     | job 6679235623 has completed (purged errors)
[2025-06-05 03:08:49] 2025-06-05 00:53:30,969 | INFO     | overall cleanup function is called
[2025-06-05 03:08:49] 2025-06-05 00:53:31,977 | INFO     | --- collectZombieJob: --- 10, [16461]
[2025-06-05 03:08:49] 2025-06-05 00:53:31,978 | INFO     | zombie collector waiting for pid 16461
[2025-06-05 03:08:49] 2025-06-05 00:53:31,978 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 03:08:49] 2025-06-05 00:53:31,978 | INFO     | collected zombie processes
[2025-06-05 03:08:49] 2025-06-05 00:53:31,978 | INFO     | will attempt to kill all subprocesses of pid=16461
[2025-06-05 03:08:49] 2025-06-05 00:53:32,085 | INFO     | process IDs to be killed: [16461] (in reverse order)
[2025-06-05 03:08:49] 2025-06-05 00:53:32,816 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 03:08:49] 2025-06-05 00:53:32,817 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 03:08:49] 2025-06-05 00:53:32,820 | INFO     | did not find any defunct processes belonging to 16461
[2025-06-05 03:08:49] 2025-06-05 00:53:32,823 | INFO     | did not find any defunct processes belonging to 16461
[2025-06-05 03:08:49] 2025-06-05 00:53:32,824 | INFO     | ready for new job
[2025-06-05 03:08:49] 2025-06-05 00:53:32,824 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 03:08:49] 2025-06-05 00:53:32,826 | INFO     | **************************************
[2025-06-05 03:08:49] 2025-06-05 00:53:32,827 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 03:08:49] 2025-06-05 00:53:32,827 | INFO     | **************************************
[2025-06-05 03:08:49] 2025-06-05 00:53:32,827 | INFO     | 
[2025-06-05 03:08:49] 2025-06-05 00:53:32,827 | INFO     | pilot is running in a VM
[2025-06-05 03:08:49] 2025-06-05 00:53:32,828 | INFO     | architecture information:
[2025-06-05 03:08:49] 2025-06-05 00:53:32,841 | INFO     | executing command: cat /etc/os-release
[2025-06-05 03:08:49] 2025-06-05 00:53:32,965 | INFO     | cat /etc/os-release:
[2025-06-05 03:08:49] NAME="CentOS Linux"
[2025-06-05 03:08:49] VERSION="7 (Core)"
[2025-06-05 03:08:49] ID="centos"
[2025-06-05 03:08:49] ID_LIKE="rhel fedora"
[2025-06-05 03:08:49] VERSION_ID="7"
[2025-06-05 03:08:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 03:08:49] ANSI_COLOR="0;31"
[2025-06-05 03:08:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 03:08:49] HOME_URL="https://www.centos.org/"
[2025-06-05 03:08:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 03:08:49] 
[2025-06-05 03:08:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 03:08:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 03:08:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 03:08:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 03:08:49] 
[2025-06-05 03:08:49] 2025-06-05 00:53:32,970 | INFO     | **************************************
[2025-06-05 03:08:49] 2025-06-05 00:53:33,474 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-05 03:08:49] 2025-06-05 00:53:33,698 | INFO     | sufficient remaining disk space (497145610240 B)
[2025-06-05 03:08:49] 2025-06-05 00:53:33,698 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 03:08:49] 2025-06-05 00:53:33,699 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 03:08:49] 2025-06-05 00:53:33,699 | INFO     | update_server=False
[2025-06-05 03:08:49] 2025-06-05 00:53:33,699 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 03:08:49] 2025-06-05 00:53:33,771 | INFO     | all payload control threads have been joined
[2025-06-05 03:08:49] 2025-06-05 00:53:33,827 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 03:08:49] 2025-06-05 00:53:34,410 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 03:08:49] 2025-06-05 00:53:34,410 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 03:08:49] 2025-06-05 00:53:34,410 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 03:08:49] 2025-06-05 00:53:34,553 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:08:49] 2025-06-05 00:53:34,554 | INFO     | aborting loop
[2025-06-05 03:08:49] 2025-06-05 00:53:34,634 | INFO     | all data control threads have been joined
[2025-06-05 03:08:49] 2025-06-05 00:53:34,705 | INFO     | [job] retrieve thread has finished
[2025-06-05 03:08:49] 2025-06-05 00:53:34,778 | INFO     | [payload] control thread has finished
[2025-06-05 03:08:49] 2025-06-05 00:53:34,858 | INFO     | [job] validate thread has finished
[2025-06-05 03:08:49] 2025-06-05 00:53:35,054 | INFO     | [data] copytool_in thread has finished
[2025-06-05 03:08:49] 2025-06-05 00:53:35,218 | INFO     | all job control threads have been joined
[2025-06-05 03:08:49] 2025-06-05 00:53:35,436 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 03:08:49] 2025-06-05 00:53:35,472 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 03:08:49] 2025-06-05 00:53:35,497 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:08:49] 2025-06-05 00:53:35,519 | INFO     | [payload] failed_post thread has finished
[2025-06-05 03:08:49] 2025-06-05 00:53:35,559 | INFO     | [job] job monitor thread has finished
[2025-06-05 03:08:49] 2025-06-05 00:53:35,640 | INFO     | [data] control thread has finished
[2025-06-05 03:08:49] 2025-06-05 00:53:35,658 | INFO     | [payload] validate_post thread has finished
[2025-06-05 03:08:49] 2025-06-05 00:53:35,833 | INFO     | [data] copytool_out thread has finished
[2025-06-05 03:08:49] 2025-06-05 00:53:36,013 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 03:08:49] 2025-06-05 00:53:36,116 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 03:08:49] 2025-06-05 00:53:36,224 | INFO     | [job] control thread has finished
[2025-06-05 03:08:49] 2025-06-05 00:53:36,377 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 03:08:49] 2025-06-05 00:53:36,503 | INFO     | [job] queue monitor thread has finished
[2025-06-05 03:08:49] 2025-06-05 00:53:40,386 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 03:08:49] 2025-06-05 00:53:42,414 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139628402788160)>', '<ExcThread(monitor, started 139627809715968)>']
[2025-06-05 03:08:49] 2025-06-05 00:53:42,457 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 03:08:49] 2025-06-05 00:53:42,458 | INFO     | [monitor] control thread has ended
[2025-06-05 03:08:49] 2025-06-05 00:53:47,440 | INFO     | all workflow threads have been joined
[2025-06-05 03:08:49] 2025-06-05 00:53:47,441 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 03:08:49] 2025-06-05 00:53:47,441 | INFO     | traces error code: 0
[2025-06-05 03:08:49] 2025-06-05 00:53:47,441 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 03:08:49] 2025-06-05 00:53:47,815 [wrapper] ==== pilot stdout END ====
[2025-06-05 03:08:49] 2025-06-05 00:53:47,941 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 03:08:49] 2025-06-05 00:53:48,034 [wrapper] pilotpid: 5906
[2025-06-05 03:08:49] 2025-06-05 00:53:48,066 [wrapper] Pilot exit status: 0
[2025-06-05 03:08:49] 2025-06-05 00:53:48,499 [wrapper] pandaids: 6679235623
[2025-06-05 03:08:49] 2025-06-05 00:53:49,375 [wrapper] cleanup supervisor_pilot 26313 5907
[2025-06-05 03:08:49] 2025-06-05 00:53:49,434 [wrapper] Test setup, not cleaning
[2025-06-05 03:08:49] 2025-06-05 00:53:49,556 [wrapper] apfmon messages muted
[2025-06-05 03:08:49] 2025-06-05 00:53:49,659 [wrapper] ==== wrapper stdout END ====
[2025-06-05 03:08:49] 2025-06-05 00:53:49,757 [wrapper] ==== wrapper stderr END ====
[2025-06-05 03:08:49]  *** Error codes and diagnostics ***
[2025-06-05 03:08:49]     "exeErrorCode": 0,
[2025-06-05 03:08:49]     "exeErrorDiag": "",
[2025-06-05 03:08:49]     "pilotErrorCode": 0,
[2025-06-05 03:08:49]     "pilotErrorDiag": "",
[2025-06-05 03:08:49]  *** Listing of results directory ***
[2025-06-05 03:08:49] total 389540
[2025-06-05 03:08:49] -rw-r--r--. 1 boinc boinc    495897 Jun  4 10:46 pilot3.tar.gz
[2025-06-05 03:08:49] -rwx------. 1 boinc boinc     37140 Jun  4 10:56 runpilot2-wrapper.sh
[2025-06-05 03:08:49] -rw-r--r--. 1 boinc boinc      5111 Jun  4 10:56 queuedata.json
[2025-06-05 03:08:49] -rw-r--r--. 1 boinc boinc       100 Jun  4 23:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 03:08:49] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 23:03 run_atlas
[2025-06-05 03:08:49] -rw-r--r--. 1 boinc boinc       105 Jun  4 23:03 job.xml
[2025-06-05 03:08:49] -rw-r--r--. 2 boinc boinc 216998597 Jun  4 23:03 EVNT.45006593._000781.pool.root.1
[2025-06-05 03:08:49] -rw-r--r--. 2 boinc boinc     15093 Jun  4 23:03 start_atlas.sh
[2025-06-05 03:08:49] drwxrwx--x. 2 boinc boinc        68 Jun  4 23:03 shared
[2025-06-05 03:08:49] -rw-r--r--. 2 boinc boinc    508875 Jun  4 23:03 input.tar.gz
[2025-06-05 03:08:49] -rw-r--r--. 1 boinc boinc      6391 Jun  4 23:03 init_data.xml
[2025-06-05 03:08:49] -rw-r--r--. 1 boinc boinc         0 Jun  4 23:03 boinc_lockfile
[2025-06-05 03:08:49] -rw-r--r--. 1 boinc boinc      2524 Jun  4 23:03 pandaJob.out
[2025-06-05 03:08:49] -rw-------. 1 boinc boinc    987032 Jun  4 23:06 agis_schedconf.cvmfs.json
[2025-06-05 03:08:49] drwx------. 4 boinc boinc      4096 Jun  4 23:06 pilot3
[2025-06-05 03:08:49] -rw-------. 1 boinc boinc 174979381 Jun  5 02:50 HITS.45006595._056043.pool.root.1
[2025-06-05 03:08:49] -rw-r--r--. 1 boinc boinc       531 Jun  5 02:50 boinc_task_state.xml
[2025-06-05 03:08:49] -rw-------. 1 boinc boinc      1015 Jun  5 02:51 memory_monitor_summary.json
[2025-06-05 03:08:49] -rw-------. 1 boinc boinc   1598969 Jun  5 02:51 agis_ddmendpoints.agis.ALL.json
[2025-06-05 03:08:49] -rw-------. 1 boinc boinc    384492 Jun  5 02:51 log.45006595._056043.job.log.tgz.1
[2025-06-05 03:08:49] -rw-------. 1 boinc boinc        95 Jun  5 02:52 pilot_heartbeat.json
[2025-06-05 03:08:49] -rw-------. 1 boinc boinc      7693 Jun  5 02:53 heartbeat.json
[2025-06-05 03:08:49] -rw-------. 1 boinc boinc      4416 Jun  5 02:53 pilotlog.txt
[2025-06-05 03:08:49] -rw-------. 1 boinc boinc   1159731 Jun  5 02:53 log.45006595._056043.job.log.1
[2025-06-05 03:08:49] -rw-------. 1 boinc boinc       357 Jun  5 02:53 output.list
[2025-06-05 03:08:49] -rw-r--r--. 1 boinc boinc       620 Jun  5 02:53 runtime_log
[2025-06-05 03:08:49] -rw-------. 1 boinc boinc   1566720 Jun  5 02:53 result.tar.gz
[2025-06-05 03:08:49] -rw-r--r--. 1 boinc boinc      8659 Jun  5 02:53 runtime_log.err
[2025-06-05 03:08:49] -rw-------. 1 boinc boinc       657 Jun  5 02:53 cu2LDm45yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVrnKDmwifBBn.diag
[2025-06-05 03:08:49] -rw-r--r--. 1 boinc boinc      8192 Jun  5 03:08 boinc_mmap_file
[2025-06-05 03:08:49] -rw-r--r--. 1 boinc boinc        28 Jun  5 03:08 wrapper_checkpoint.txt
[2025-06-05 03:08:49] -rw-r--r--. 1 boinc boinc     20521 Jun  5 03:08 stderr.txt
[2025-06-05 03:08:49] HITS file was successfully produced:
[2025-06-05 03:08:49] -rw-------. 1 boinc boinc 174979381 Jun  5 02:50 shared/HITS.pool.root.1
[2025-06-05 03:08:49]  *** Contents of shared directory: ***
[2025-06-05 03:08:49] total 384844
[2025-06-05 03:08:49] -rw-r--r--. 2 boinc boinc 216998597 Jun  4 23:03 ATLAS.root_0
[2025-06-05 03:08:49] -rw-r--r--. 2 boinc boinc     15093 Jun  4 23:03 start_atlas.sh
[2025-06-05 03:08:49] -rw-r--r--. 2 boinc boinc    508875 Jun  4 23:03 input.tar.gz
[2025-06-05 03:08:49] -rw-------. 1 boinc boinc 174979381 Jun  5 02:50 HITS.pool.root.1
[2025-06-05 03:08:49] -rw-------. 1 boinc boinc   1566720 Jun  5 02:53 result.tar.gz
03:08:51 (1144): run_atlas exited; CPU time 48908.319779
03:08:51 (1144): called boinc_finish(0)

</stderr_txt>
]]>

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