Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:05:08 (13765): wrapper (7.7.26015): starting
09:05:08 (13765): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 09:05:08] Arguments: --nthreads 10
[2025-06-04 09:05:08] Threads: 10
[2025-06-04 09:05:08] Checking for CVMFS
[2025-06-04 09:05:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:05:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:05:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:05:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:05:09] 2.11.2.0 20666 108060 268524 146780 1 476 17605598 18432001 17041 130560 0 549589852 99.216 955107928 35647 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 09:05:09] CVMFS is ok
[2025-06-04 09:05:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:05:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:05:09] Further information can be found at the LHC@home message board.
[2025-06-04 09:05:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:05:09] Checking for apptainer binary...
[2025-06-04 09:05:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:05:09] Running /usr/bin/apptainer --version
[2025-06-04 09:05:09] apptainer version 1.3.2-1.el7
[2025-06-04 09:05:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:05:11] c-210-2.aglt2.org
[2025-06-04 09:05:11] apptainer works
[2025-06-04 09:05:11] Set ATHENA_PROC_NUMBER=10
[2025-06-04 09:05:11] Set ATHENA_CORE_NUMBER=10
[2025-06-04 09:05:11] Starting ATLAS job with PandaID=6679172301
[2025-06-04 09:05:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:05:09]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:05:09] 2025-06-04 18:04:48,824 | INFO     | extracted standard info from prmon json
[2025-06-04 14:05:09] 2025-06-04 18:04:48,824 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:05:09] 2025-06-04 18:04:48,824 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:05:09] 2025-06-04 18:04:48,825 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:05:09] 2025-06-04 18:04:48,825 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:05:09] 2025-06-04 18:04:48,903 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:05:09] 2025-06-04 18:04:48,903 | INFO     | sum of square deviations: 7799737366.300356
[2025-06-04 14:05:09] 2025-06-04 18:04:48,963 | INFO     | sum of deviations: 35697505517.99657
[2025-06-04 14:05:09] 2025-06-04 18:04:48,964 | INFO     | mean x: 1749051282.2081912
[2025-06-04 14:05:09] 2025-06-04 18:04:48,964 | INFO     | mean y: 2545814.9180887374
[2025-06-04 14:05:09] 2025-06-04 18:04:48,964 | INFO     | -- intersect: -8002437541.015274
[2025-06-04 14:05:09] 2025-06-04 18:04:48,964 | INFO     | intersect: -8002437541.015274
[2025-06-04 14:05:09] 2025-06-04 18:04:48,965 | INFO     | chi2: 3.176955002368151
[2025-06-04 14:05:09] 2025-06-04 18:04:48,965 | INFO     | sum of square deviations: 7407191931.913137
[2025-06-04 14:05:09] 2025-06-04 18:04:48,972 | INFO     | sum of deviations: 75768926906.1423
[2025-06-04 14:05:09] 2025-06-04 18:04:48,972 | INFO     | mean x: 1749051129.7048612
[2025-06-04 14:05:09] 2025-06-04 18:04:48,972 | INFO     | mean y: 2561217.684027778
[2025-06-04 14:05:09] 2025-06-04 18:04:48,972 | INFO     | -- intersect: -17888662395.781174
[2025-06-04 14:05:09] 2025-06-04 18:04:48,972 | INFO     | intersect: -17888662395.781174
[2025-06-04 14:05:09] 2025-06-04 18:04:48,973 | INFO     | chi2: 1.5108676966574748
[2025-06-04 14:05:09] 2025-06-04 18:04:48,973 | INFO     | current chi2=1.5108676966574748 (change=52.442899080054616 %)
[2025-06-04 14:05:09] 2025-06-04 18:04:48,974 | INFO     | sum of square deviations: 7028059790.11307
[2025-06-04 14:05:09] 2025-06-04 18:04:48,977 | INFO     | sum of deviations: 73933366258.01414
[2025-06-04 14:05:09] 2025-06-04 18:04:48,977 | INFO     | mean x: 1749050977.204947
[2025-06-04 14:05:09] 2025-06-04 18:04:48,978 | INFO     | mean y: 2560479.2756183743
[2025-06-04 14:05:09] 2025-06-04 18:04:48,978 | INFO     | -- intersect: -18397002182.889847
[2025-06-04 14:05:09] 2025-06-04 18:04:48,978 | INFO     | intersect: -18397002182.889847
[2025-06-04 14:05:09] 2025-06-04 18:04:48,978 | INFO     | chi2: 1.5109348545607002
[2025-06-04 14:05:09] 2025-06-04 18:04:48,979 | INFO     | current chi2=1.5109348545607002 (change=-0.00444498902015035 %)
[2025-06-04 14:05:09] 2025-06-04 18:04:48,979 | INFO     | right removable region: 282
[2025-06-04 14:05:09] 2025-06-04 18:04:48,979 | INFO     | sum of square deviations: 7407190471.079864
[2025-06-04 14:05:09] 2025-06-04 18:04:48,986 | INFO     | sum of deviations: -13590773945.791664
[2025-06-04 14:05:09] 2025-06-04 18:04:48,986 | INFO     | mean x: 1749051434.7118056
[2025-06-04 14:05:09] 2025-06-04 18:04:48,986 | INFO     | mean y: 2564840.2916666665
[2025-06-04 14:05:09] 2025-06-04 18:04:48,986 | INFO     | -- intersect: 3211738785.7356896
[2025-06-04 14:05:09] 2025-06-04 18:04:48,986 | INFO     | intersect: 3211738785.7356896
[2025-06-04 14:05:09] 2025-06-04 18:04:48,987 | INFO     | chi2: 1.7419368905012296
[2025-06-04 14:05:09] 2025-06-04 18:04:48,987 | INFO     | current chi2=1.7419368905012296 (change=45.16960771547714 %)
[2025-06-04 14:05:09] 2025-06-04 18:04:48,995 | INFO     | sum of square deviations: 7028039175.851548
[2025-06-04 14:05:09] 2025-06-04 18:04:48,997 | INFO     | sum of deviations: -21741055878.469955
[2025-06-04 14:05:09] 2025-06-04 18:04:48,998 | INFO     | mean x: 1749051587.2155478
[2025-06-04 14:05:09] 2025-06-04 18:04:48,998 | INFO     | mean y: 2568094.51590106
[2025-06-04 14:05:09] 2025-06-04 18:04:48,998 | INFO     | -- intersect: 5413213559.134041
[2025-06-04 14:05:09] 2025-06-04 18:04:48,998 | INFO     | intersect: 5413213559.134041
[2025-06-04 14:05:09] 2025-06-04 18:04:48,999 | INFO     | chi2: 1.698063505083997
[2025-06-04 14:05:09] 2025-06-04 18:04:48,999 | INFO     | current chi2=1.698063505083997 (change=2.518655277150045 %)
[2025-06-04 14:05:09] 2025-06-04 18:04:48,999 | INFO     | left removable region: 20
[2025-06-04 14:05:09] 2025-06-04 18:04:48,999 | INFO     | sum of square deviations: 5576666750.660305
[2025-06-04 14:05:09] 2025-06-04 18:04:49,005 | INFO     | sum of deviations: 14874595527.488552
[2025-06-04 14:05:09] 2025-06-04 18:04:49,006 | INFO     | mean x: 1749051556.721374
[2025-06-04 14:05:09] 2025-06-04 18:04:49,006 | INFO     | mean y: 2585033.1984732826
[2025-06-04 14:05:09] 2025-06-04 18:04:49,006 | INFO     | -- intersect: -4662645224.62071
[2025-06-04 14:05:09] 2025-06-04 18:04:49,006 | INFO     | intersect: -4662645224.62071
[2025-06-04 14:05:09] 2025-06-04 18:04:49,007 | INFO     | chi2: 0.0004381690726252863
[2025-06-04 14:05:09] 2025-06-04 18:04:49,007 | INFO     | -- intersect: -4662645224.62071
[2025-06-04 14:05:09] 2025-06-04 18:04:49,007 | INFO     | current memory leak: 2.67 B/s (using 262 data points, chi2=0.00)
[2025-06-04 14:05:09] 2025-06-04 18:04:49,012 | INFO     | ..............................
[2025-06-04 14:05:09] 2025-06-04 18:04:49,012 | INFO     | . Timing measurements:
[2025-06-04 14:05:09] 2025-06-04 18:04:49,012 | INFO     | . get job = 0 s
[2025-06-04 14:05:09] 2025-06-04 18:04:49,012 | INFO     | . initial setup = 3 s
[2025-06-04 14:05:09] 2025-06-04 18:04:49,012 | INFO     | . payload setup = 13 s
[2025-06-04 14:05:09] 2025-06-04 18:04:49,012 | INFO     | . stage-in = 0 s
[2025-06-04 14:05:09] 2025-06-04 18:04:49,013 | INFO     | . payload execution = 17854 s
[2025-06-04 14:05:09] 2025-06-04 18:04:49,013 | INFO     | . stage-out = 4 s
[2025-06-04 14:05:09] 2025-06-04 18:04:49,013 | INFO     | . log creation = 0 s
[2025-06-04 14:05:09] 2025-06-04 18:04:49,013 | INFO     | ..............................
[2025-06-04 14:05:09] 2025-06-04 18:04:49,581 | INFO     | 
[2025-06-04 14:05:09] 2025-06-04 18:04:49,581 | INFO     | job summary report
[2025-06-04 14:05:09] 2025-06-04 18:04:49,581 | INFO     | --------------------------------------------------
[2025-06-04 14:05:09] 2025-06-04 18:04:49,581 | INFO     | PanDA job id: 6679172301
[2025-06-04 14:05:09] 2025-06-04 18:04:49,581 | INFO     | task id: 44871837
[2025-06-04 14:05:09] 2025-06-04 18:04:49,581 | INFO     | errors: (none)
[2025-06-04 14:05:09] 2025-06-04 18:04:49,581 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:05:09] 2025-06-04 18:04:49,582 | INFO     | pilot state: finished 
[2025-06-04 14:05:09] 2025-06-04 18:04:49,582 | INFO     | transexitcode: 0
[2025-06-04 14:05:09] 2025-06-04 18:04:49,582 | INFO     | exeerrorcode: 0
[2025-06-04 14:05:09] 2025-06-04 18:04:49,582 | INFO     | exeerrordiag: 
[2025-06-04 14:05:09] 2025-06-04 18:04:49,582 | INFO     | exitcode: 0
[2025-06-04 14:05:09] 2025-06-04 18:04:49,582 | INFO     | exitmsg: OK
[2025-06-04 14:05:09] 2025-06-04 18:04:49,582 | INFO     | cpuconsumptiontime: 67272 s
[2025-06-04 14:05:09] 2025-06-04 18:04:49,582 | INFO     | nevents: 400
[2025-06-04 14:05:09] 2025-06-04 18:04:49,582 | INFO     | neventsw: 0
[2025-06-04 14:05:09] 2025-06-04 18:04:49,583 | INFO     | pid: 25030
[2025-06-04 14:05:09] 2025-06-04 18:04:49,583 | INFO     | pgrp: 25030
[2025-06-04 14:05:09] 2025-06-04 18:04:49,583 | INFO     | corecount: 10
[2025-06-04 14:05:09] 2025-06-04 18:04:49,583 | INFO     | event service: False
[2025-06-04 14:05:09] 2025-06-04 18:04:49,583 | INFO     | sizes: {0: 2397115, 1: 2397370, 9: 2397576, 12: 2397604, 17872: 2429842, 17876: 2438783, 17877: 2438967, 17939: 2439137}
[2025-06-04 14:05:09] 2025-06-04 18:04:49,583 | INFO     | --------------------------------------------------
[2025-06-04 14:05:09] 2025-06-04 18:04:49,583 | INFO     | 
[2025-06-04 14:05:09] 2025-06-04 18:04:49,583 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 14:05:09] 2025-06-04 18:04:49,979 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:05:09] 2025-06-04 18:04:49,979 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:05:09] 2025-06-04 18:04:49,980 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:05:09] 2025-06-04 18:04:49,980 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:05:09] 2025-06-04 18:04:49,980 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:05:09] 2025-06-04 18:04:49,980 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:05:09] 2025-06-04 18:04:49,980 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:05:09] 2025-06-04 18:04:49,980 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:05:09] 2025-06-04 18:04:49,980 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:05:09] 2025-06-04 18:04:49,980 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:05:09] 2025-06-04 18:04:50,002 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:05:09] 2025-06-04 18:04:50,002 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:05:09] 2025-06-04 18:04:50,003 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:05:09] 2025-06-04 18:04:50,003 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:05:09] 2025-06-04 18:04:50,003 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:05:09] 2025-06-04 18:04:50,003 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:05:09] 2025-06-04 18:04:50,003 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:05:09] 2025-06-04 18:04:50,003 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:05:09] 2025-06-04 18:04:50,003 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:05:09] 2025-06-04 18:04:50,003 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:05:09] 2025-06-04 18:04:50,003 | INFO     | job 6679172301 has completed (purged errors)
[2025-06-04 14:05:09] 2025-06-04 18:04:50,004 | INFO     | overall cleanup function is called
[2025-06-04 14:05:09] 2025-06-04 18:04:51,018 | INFO     | --- collectZombieJob: --- 10, [25030]
[2025-06-04 14:05:09] 2025-06-04 18:04:51,018 | INFO     | zombie collector waiting for pid 25030
[2025-06-04 14:05:09] 2025-06-04 18:04:51,018 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:05:09] 2025-06-04 18:04:51,018 | INFO     | collected zombie processes
[2025-06-04 14:05:09] 2025-06-04 18:04:51,018 | INFO     | will attempt to kill all subprocesses of pid=25030
[2025-06-04 14:05:09] 2025-06-04 18:04:52,712 | INFO     | process IDs to be killed: [25030] (in reverse order)
[2025-06-04 14:05:09] 2025-06-04 18:04:53,200 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:05:09] 2025-06-04 18:04:53,201 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:05:09] 2025-06-04 18:04:53,211 | INFO     | did not find any defunct processes belonging to 25030
[2025-06-04 14:05:09] 2025-06-04 18:04:53,221 | INFO     | did not find any defunct processes belonging to 25030
[2025-06-04 14:05:09] 2025-06-04 18:04:53,222 | INFO     | ready for new job
[2025-06-04 14:05:09] 2025-06-04 18:04:53,222 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:05:09] 2025-06-04 18:04:53,224 | INFO     | **************************************
[2025-06-04 14:05:09] 2025-06-04 18:04:53,224 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:05:09] 2025-06-04 18:04:53,224 | INFO     | **************************************
[2025-06-04 14:05:09] 2025-06-04 18:04:53,225 | INFO     | 
[2025-06-04 14:05:09] 2025-06-04 18:04:53,227 | INFO     | architecture information:
[2025-06-04 14:05:09] 2025-06-04 18:04:53,227 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:05:09] 2025-06-04 18:04:53,380 | INFO     | cat /etc/os-release:
[2025-06-04 14:05:09] NAME="CentOS Linux"
[2025-06-04 14:05:09] VERSION="7 (Core)"
[2025-06-04 14:05:09] ID="centos"
[2025-06-04 14:05:09] ID_LIKE="rhel fedora"
[2025-06-04 14:05:09] VERSION_ID="7"
[2025-06-04 14:05:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:05:09] ANSI_COLOR="0;31"
[2025-06-04 14:05:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:05:09] HOME_URL="https://www.centos.org/"
[2025-06-04 14:05:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:05:09] 
[2025-06-04 14:05:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:05:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:05:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:05:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:05:09] 
[2025-06-04 14:05:09] 2025-06-04 18:04:53,381 | INFO     | **************************************
[2025-06-04 14:05:09] 2025-06-04 18:04:53,884 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 14:05:09] 2025-06-04 18:04:54,028 | INFO     | sufficient remaining disk space (57100206080 B)
[2025-06-04 14:05:09] 2025-06-04 18:04:54,028 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:05:09] 2025-06-04 18:04:54,028 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:05:09] 2025-06-04 18:04:54,028 | INFO     | update_server=False
[2025-06-04 14:05:09] 2025-06-04 18:04:54,028 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:05:09] 2025-06-04 18:04:54,029 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:05:09] 2025-06-04 18:04:54,029 | INFO     | aborting loop
[2025-06-04 14:05:09] 2025-06-04 18:04:54,039 | INFO     | all data control threads have been joined
[2025-06-04 14:05:09] 2025-06-04 18:04:54,264 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:05:09] 2025-06-04 18:04:54,375 | INFO     | all payload control threads have been joined
[2025-06-04 14:05:09] 2025-06-04 18:04:55,035 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:05:09] 2025-06-04 18:04:55,035 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:05:09] 2025-06-04 18:04:55,050 | INFO     | [data] control thread has finished
[2025-06-04 14:05:09] 2025-06-04 18:04:55,245 | INFO     | PID=17768 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 14:05:09] 2025-06-04 18:04:55,246 | INFO     | .. there are 28 such processes running
[2025-06-04 14:05:09] 2025-06-04 18:04:55,246 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:05:09] 2025-06-04 18:04:55,246 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:05:09] 2025-06-04 18:04:55,246 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:05:09] 2025-06-04 18:04:55,270 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:05:09] 2025-06-04 18:04:55,342 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:05:09] 2025-06-04 18:04:55,367 | INFO     | all job control threads have been joined
[2025-06-04 14:05:09] 2025-06-04 18:04:55,381 | INFO     | [payload] control thread has finished
[2025-06-04 14:05:09] 2025-06-04 18:04:55,439 | INFO     | [job] validate thread has finished
[2025-06-04 14:05:09] 2025-06-04 18:04:55,507 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:05:09] 2025-06-04 18:04:55,511 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:05:09] 2025-06-04 18:04:56,066 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:05:09] 2025-06-04 18:04:56,096 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:05:09] 2025-06-04 18:04:56,103 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:05:09] 2025-06-04 18:04:56,356 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:05:09] 2025-06-04 18:04:56,372 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:05:09] 2025-06-04 18:04:56,372 | INFO     | [job] control thread has finished
[2025-06-04 14:05:09] 2025-06-04 18:04:57,051 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:05:09] 2025-06-04 18:04:57,349 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:05:09] 2025-06-04 18:05:01,060 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:05:09] 2025-06-04 18:05:01,724 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139692034819904)>', '<ExcThread(monitor, started 139691328272128)>']
[2025-06-04 14:05:09] 2025-06-04 18:05:02,288 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:05:09] 2025-06-04 18:05:02,288 | INFO     | [monitor] control thread has ended
[2025-06-04 14:05:09] 2025-06-04 18:05:06,752 | INFO     | all workflow threads have been joined
[2025-06-04 14:05:09] 2025-06-04 18:05:06,752 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:05:09] 2025-06-04 18:05:06,756 | INFO     | traces error code: 0
[2025-06-04 14:05:09] 2025-06-04 18:05:06,756 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:05:09] 2025-06-04 18:05:07,241 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:05:09] 2025-06-04 18:05:07,277 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:05:09] 2025-06-04 18:05:07,324 [wrapper] pilotpid: 17768
[2025-06-04 14:05:09] 2025-06-04 18:05:07,351 [wrapper] Pilot exit status: 0
[2025-06-04 14:05:09] 2025-06-04 18:05:07,563 [wrapper] pandaids: 6679172301
[2025-06-04 14:05:09] 2025-06-04 18:05:08,085 [wrapper] cleanup supervisor_pilot 15219 17769
[2025-06-04 14:05:09] 2025-06-04 18:05:08,117 [wrapper] Test setup, not cleaning
[2025-06-04 14:05:09] 2025-06-04 18:05:08,198 [wrapper] apfmon messages muted
[2025-06-04 14:05:09] 2025-06-04 18:05:08,239 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:05:09] 2025-06-04 18:05:08,269 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:05:09]  *** Error codes and diagnostics ***
[2025-06-04 14:05:09]     "exeErrorCode": 0,
[2025-06-04 14:05:09]     "exeErrorDiag": "",
[2025-06-04 14:05:09]     "pilotErrorCode": 0,
[2025-06-04 14:05:09]     "pilotErrorDiag": "",
[2025-06-04 14:05:09]  *** Listing of results directory ***
[2025-06-04 14:05:09] total 422216
[2025-06-04 14:05:09] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 14:05:09] -rwx------ 1 boincer umatlas     37140 Jun  4 04:51 runpilot2-wrapper.sh
[2025-06-04 14:05:09] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 04:51 queuedata.json
[2025-06-04 14:05:09] -rw-r--r-- 1 boincer umatlas       100 Jun  4 09:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:05:09] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 09:05 run_atlas
[2025-06-04 14:05:09] -rw-r--r-- 1 boincer umatlas       105 Jun  4 09:05 job.xml
[2025-06-04 14:05:09] -rw-r--r-- 2 boincer umatlas 223360885 Jun  4 09:05 EVNT.44871834._003577.pool.root.1
[2025-06-04 14:05:09] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:05 start_atlas.sh
[2025-06-04 14:05:09] drwxrwx--x 2 boincer umatlas      4096 Jun  4 09:05 shared
[2025-06-04 14:05:09] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 09:05 input.tar.gz
[2025-06-04 14:05:09] -rw-r--r-- 1 boincer umatlas         0 Jun  4 09:05 boinc_lockfile
[2025-06-04 14:05:09] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 09:05 pandaJob.out
[2025-06-04 14:05:09] -rw------- 1 boincer umatlas    986811 Jun  4 09:05 agis_schedconf.cvmfs.json
[2025-06-04 14:05:09] drwx------ 4 boincer umatlas      4096 Jun  4 09:05 pilot3
[2025-06-04 14:05:09] -rw------- 1 boincer umatlas 201141063 Jun  4 14:01 HITS.44871837._102156.pool.root.1
[2025-06-04 14:05:09] -rw-r--r-- 1 boincer umatlas       531 Jun  4 14:02 boinc_task_state.xml
[2025-06-04 14:05:09] -rw------- 1 boincer umatlas      1063 Jun  4 14:03 memory_monitor_summary.json
[2025-06-04 14:05:09] -rw------- 1 boincer umatlas   1598969 Jun  4 14:03 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:05:09] -rw------- 1 boincer umatlas    467269 Jun  4 14:03 log.44871837._102156.job.log.tgz.1
[2025-06-04 14:05:09] -rw------- 1 boincer umatlas      7757 Jun  4 14:04 heartbeat.json
[2025-06-04 14:05:09] -rw------- 1 boincer umatlas        95 Jun  4 14:04 pilot_heartbeat.json
[2025-06-04 14:05:09] -rw-r--r-- 1 boincer umatlas      6228 Jun  4 14:04 init_data.xml
[2025-06-04 14:05:09] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 14:05 boinc_mmap_file
[2025-06-04 14:05:09] -rw-r--r-- 1 boincer umatlas        28 Jun  4 14:05 wrapper_checkpoint.txt
[2025-06-04 14:05:09] -rw------- 1 boincer umatlas      4746 Jun  4 14:05 pilotlog.txt
[2025-06-04 14:05:09] -rw------- 1 boincer umatlas   1537790 Jun  4 14:05 log.44871837._102156.job.log.1
[2025-06-04 14:05:09] -rw------- 1 boincer umatlas       357 Jun  4 14:05 output.list
[2025-06-04 14:05:09] -rw-r--r-- 1 boincer umatlas       620 Jun  4 14:05 runtime_log
[2025-06-04 14:05:09] -rw------- 1 boincer umatlas   2027520 Jun  4 14:05 result.tar.gz
[2025-06-04 14:05:09] -rw-r--r-- 1 boincer umatlas      8657 Jun  4 14:05 runtime_log.err
[2025-06-04 14:05:09] -rw------- 1 boincer umatlas       661 Jun  4 14:05 bX8NDmS1yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjpnKDmRhVYqn.diag
[2025-06-04 14:05:09] -rw-r--r-- 1 boincer umatlas     20942 Jun  4 14:05 stderr.txt
[2025-06-04 14:05:09] HITS file was successfully produced:
[2025-06-04 14:05:09] -rw------- 1 boincer umatlas 201141063 Jun  4 14:01 shared/HITS.pool.root.1
[2025-06-04 14:05:09]  *** Contents of shared directory: ***
[2025-06-04 14:05:09] total 417060
[2025-06-04 14:05:09] -rw-r--r-- 2 boincer umatlas 223360885 Jun  4 09:05 ATLAS.root_0
[2025-06-04 14:05:09] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:05 start_atlas.sh
[2025-06-04 14:05:09] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 09:05 input.tar.gz
[2025-06-04 14:05:09] -rw------- 1 boincer umatlas 201141063 Jun  4 14:01 HITS.pool.root.1
[2025-06-04 14:05:09] -rw------- 1 boincer umatlas   2027520 Jun  4 14:05 result.tar.gz
14:05:11 (13765): run_atlas exited; CPU time 67775.727184
14:05:11 (13765): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN