Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:40:42 (613025): wrapper (7.7.26015): starting
03:40:42 (613025): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 03:40:42] Arguments: --nthreads 4
[2025-06-06 03:40:42] Threads: 4
[2025-06-06 03:40:42] Checking for CVMFS
[2025-06-06 03:40:42] No cvmfs_config command found, will try listing directly
[2025-06-06 03:40:42] CVMFS is ok
[2025-06-06 03:40:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 03:40:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 03:40:42] Further information can be found at the LHC@home message board.
[2025-06-06 03:40:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 03:40:42] Checking for apptainer binary...
[2025-06-06 03:40:42] which: no apptainer in ((null))
[2025-06-06 03:40:42] apptainer is not installed, using version from CVMFS
[2025-06-06 03:40:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 03:40:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2025-06-06 03:40:42] apptainer works
[2025-06-06 03:40:42] Set ATHENA_PROC_NUMBER=4
[2025-06-06 03:40:42] Set ATHENA_CORE_NUMBER=4
[2025-06-06 03:40:42] Starting ATLAS job with PandaID=6679117826
[2025-06-06 03:40:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 06:42:05]  *** The last 200 lines of the pilot log: ***
[2025-06-06 06:42:05] 2025-06-06 04:37:08,285 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3209485/.job.ad'
[2025-06-06 06:42:05] 2025-06-06 04:37:08,285 | INFO     | total number of processed events: 400 (read)
[2025-06-06 06:42:05] 2025-06-06 04:37:08,288 | INFO     | executing command: lscpu
[2025-06-06 06:42:05] 2025-06-06 04:37:08,334 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 06:42:05] 2025-06-06 04:37:08,789 | INFO     | monitor loop #779: job 0:6679117826 is in state 'finished'
[2025-06-06 06:42:05] 2025-06-06 04:37:08,790 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 06:42:05] 2025-06-06 04:37:11,292 | INFO     | monitor loop #780: job 0:6679117826 is in state 'finished'
[2025-06-06 06:42:05] 2025-06-06 04:37:11,293 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 06:42:05] 2025-06-06 04:37:12,069 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 06:42:05] 2025-06-06 04:37:12,069 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6679117826/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 06:42:05] 2025-06-06 04:37:12,070 | INFO     | extracted standard info from prmon json
[2025-06-06 06:42:05] 2025-06-06 04:37:12,070 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 06:42:05] 2025-06-06 04:37:12,070 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 06:42:05] 2025-06-06 04:37:12,071 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 06:42:05] 2025-06-06 04:37:12,071 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 06:42:05] 2025-06-06 04:37:12,075 | INFO     | fitting pss+swap vs Time
[2025-06-06 06:42:05] 2025-06-06 04:37:12,075 | INFO     | sum of square deviations: 1605470102.0
[2025-06-06 06:42:05] 2025-06-06 04:37:12,077 | INFO     | sum of deviations: -13698702472.999996
[2025-06-06 06:42:05] 2025-06-06 04:37:12,077 | INFO     | mean x: 1749179323.0
[2025-06-06 06:42:05] 2025-06-06 04:37:12,077 | INFO     | mean y: 2365598.61849711
[2025-06-06 06:42:05] 2025-06-06 04:37:12,077 | INFO     | -- intersect: 14927269580.231579
[2025-06-06 06:42:05] 2025-06-06 04:37:12,077 | INFO     | intersect: 14927269580.231579
[2025-06-06 06:42:05] 2025-06-06 04:37:12,077 | INFO     | chi2: 1.8928267558338425
[2025-06-06 06:42:05] 2025-06-06 04:37:12,078 | INFO     | sum of square deviations: 1470248962.0
[2025-06-06 06:42:05] 2025-06-06 04:37:12,079 | INFO     | sum of deviations: -13082996685.500002
[2025-06-06 06:42:05] 2025-06-06 04:37:12,079 | INFO     | mean x: 1749179170.5
[2025-06-06 06:42:05] 2025-06-06 04:37:12,079 | INFO     | mean y: 2366293.2321428573
[2025-06-06 06:42:05] 2025-06-06 04:37:12,079 | INFO     | -- intersect: 15567420839.413923
[2025-06-06 06:42:05] 2025-06-06 04:37:12,079 | INFO     | intersect: 15567420839.413923
[2025-06-06 06:42:05] 2025-06-06 04:37:12,080 | INFO     | chi2: 1.8906094802881557
[2025-06-06 06:42:05] 2025-06-06 04:37:12,080 | INFO     | current chi2=1.8906094802881557 (change=0.11714096595755677 %)
[2025-06-06 06:42:05] 2025-06-06 04:37:12,080 | INFO     | right removable region: 167
[2025-06-06 06:42:05] 2025-06-06 04:37:12,080 | INFO     | sum of square deviations: 1470248962.0
[2025-06-06 06:42:05] 2025-06-06 04:37:12,081 | INFO     | sum of deviations: -39161578795.0
[2025-06-06 06:42:05] 2025-06-06 04:37:12,081 | INFO     | mean x: 1749179475.5
[2025-06-06 06:42:05] 2025-06-06 04:37:12,082 | INFO     | mean y: 2393941.9404761903
[2025-06-06 06:42:05] 2025-06-06 04:37:12,082 | INFO     | -- intersect: 46593571100.948746
[2025-06-06 06:42:05] 2025-06-06 04:37:12,082 | INFO     | intersect: 46593571100.948746
[2025-06-06 06:42:05] 2025-06-06 04:37:12,082 | INFO     | chi2: 0.3331998222416627
[2025-06-06 06:42:05] 2025-06-06 04:37:12,082 | INFO     | current chi2=0.3331998222416627 (change=82.39670792824994 %)
[2025-06-06 06:42:05] 2025-06-06 04:37:12,083 | INFO     | sum of square deviations: 1342841922.0
[2025-06-06 06:42:05] 2025-06-06 04:37:12,084 | INFO     | sum of deviations: -33259697340.000004
[2025-06-06 06:42:05] 2025-06-06 04:37:12,084 | INFO     | mean x: 1749179628.0
[2025-06-06 06:42:05] 2025-06-06 04:37:12,084 | INFO     | mean y: 2386838.7484662575
[2025-06-06 06:42:05] 2025-06-06 04:37:12,084 | INFO     | -- intersect: 43326313555.2498
[2025-06-06 06:42:05] 2025-06-06 04:37:12,084 | INFO     | intersect: 43326313555.2498
[2025-06-06 06:42:05] 2025-06-06 04:37:12,085 | INFO     | chi2: 0.32040918948360864
[2025-06-06 06:42:05] 2025-06-06 04:37:12,085 | INFO     | current chi2=0.32040918948360864 (change=3.8387273654597918 %)
[2025-06-06 06:42:05] 2025-06-06 04:37:12,085 | INFO     | left removable region: 20
[2025-06-06 06:42:05] 2025-06-06 04:37:12,085 | INFO     | sum of square deviations: 984941258.0
[2025-06-06 06:42:05] 2025-06-06 04:37:12,086 | INFO     | sum of deviations: -16045574382.999996
[2025-06-06 06:42:05] 2025-06-06 04:37:12,086 | INFO     | mean x: 1749179750.0
[2025-06-06 06:42:05] 2025-06-06 04:37:12,086 | INFO     | mean y: 2365952.088435374
[2025-06-06 06:42:05] 2025-06-06 04:37:12,086 | INFO     | -- intersect: 28498069183.013844
[2025-06-06 06:42:05] 2025-06-06 04:37:12,087 | INFO     | intersect: 28498069183.013844
[2025-06-06 06:42:05] 2025-06-06 04:37:12,087 | INFO     | chi2: 0.22387875630432627
[2025-06-06 06:42:05] 2025-06-06 04:37:12,087 | INFO     | -- intersect: 28498069183.013844
[2025-06-06 06:42:05] 2025-06-06 04:37:12,087 | INFO     | current memory leak: -16.29 B/s (using 147 data points, chi2=0.22)
[2025-06-06 06:42:05] 2025-06-06 04:37:12,088 | INFO     | ..............................
[2025-06-06 06:42:05] 2025-06-06 04:37:12,088 | INFO     | . Timing measurements:
[2025-06-06 06:42:05] 2025-06-06 04:37:12,088 | INFO     | . get job = 0 s
[2025-06-06 06:42:05] 2025-06-06 04:37:12,088 | INFO     | . initial setup = 1 s
[2025-06-06 06:42:05] 2025-06-06 04:37:12,088 | INFO     | . payload setup = 6 s
[2025-06-06 06:42:05] 2025-06-06 04:37:12,088 | INFO     | . stage-in = 0 s
[2025-06-06 06:42:05] 2025-06-06 04:37:12,088 | INFO     | . payload execution = 10548 s
[2025-06-06 06:42:05] 2025-06-06 04:37:12,089 | INFO     | . stage-out = 0 s
[2025-06-06 06:42:05] 2025-06-06 04:37:12,089 | INFO     | . log creation = 0 s
[2025-06-06 06:42:05] 2025-06-06 04:37:12,089 | INFO     | ..............................
[2025-06-06 06:42:05] 2025-06-06 04:37:12,484 | INFO     | 
[2025-06-06 06:42:05] 2025-06-06 04:37:12,485 | INFO     | job summary report
[2025-06-06 06:42:05] 2025-06-06 04:37:12,485 | INFO     | --------------------------------------------------
[2025-06-06 06:42:05] 2025-06-06 04:37:12,485 | INFO     | PanDA job id: 6679117826
[2025-06-06 06:42:05] 2025-06-06 04:37:12,485 | INFO     | task id: 45006595
[2025-06-06 06:42:05] 2025-06-06 04:37:12,485 | INFO     | errors: (none)
[2025-06-06 06:42:05] 2025-06-06 04:37:12,485 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 06:42:05] 2025-06-06 04:37:12,486 | INFO     | pilot state: finished 
[2025-06-06 06:42:05] 2025-06-06 04:37:12,486 | INFO     | transexitcode: 0
[2025-06-06 06:42:05] 2025-06-06 04:37:12,486 | INFO     | exeerrorcode: 0
[2025-06-06 06:42:05] 2025-06-06 04:37:12,486 | INFO     | exeerrordiag: 
[2025-06-06 06:42:05] 2025-06-06 04:37:12,486 | INFO     | exitcode: 0
[2025-06-06 06:42:05] 2025-06-06 04:37:12,486 | INFO     | exitmsg: OK
[2025-06-06 06:42:05] 2025-06-06 04:37:12,486 | INFO     | cpuconsumptiontime: 40301 s
[2025-06-06 06:42:05] 2025-06-06 04:37:12,486 | INFO     | nevents: 400
[2025-06-06 06:42:05] 2025-06-06 04:37:12,487 | INFO     | neventsw: 0
[2025-06-06 06:42:05] 2025-06-06 04:37:12,487 | INFO     | pid: 623472
[2025-06-06 06:42:05] 2025-06-06 04:37:12,487 | INFO     | pgrp: 623472
[2025-06-06 06:42:05] 2025-06-06 04:37:12,487 | INFO     | corecount: 4
[2025-06-06 06:42:05] 2025-06-06 04:37:12,487 | INFO     | event service: False
[2025-06-06 06:42:05] 2025-06-06 04:37:12,487 | INFO     | sizes: {0: 2397303, 4: 2397509, 11: 2397537, 10558: 2426351, 10559: 2435314, 10560: 2435370, 10565: 2435668}
[2025-06-06 06:42:05] 2025-06-06 04:37:12,487 | INFO     | --------------------------------------------------
[2025-06-06 06:42:05] 2025-06-06 04:37:12,488 | INFO     | 
[2025-06-06 06:42:05] 2025-06-06 04:37:12,488 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-06-06 06:42:05] 2025-06-06 04:37:12,506 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 06:42:05] 2025-06-06 04:37:12,506 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 06:42:05] 2025-06-06 04:37:12,507 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 06:42:05] 2025-06-06 04:37:12,507 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 06:42:05] 2025-06-06 04:37:12,507 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 06:42:05] 2025-06-06 04:37:12,507 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 06:42:05] 2025-06-06 04:37:12,507 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 06:42:05] 2025-06-06 04:37:12,507 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 06:42:05] 2025-06-06 04:37:12,507 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 06:42:05] 2025-06-06 04:37:12,507 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 06:42:05] 2025-06-06 04:37:12,507 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 06:42:05] 2025-06-06 04:37:12,508 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 06:42:05] 2025-06-06 04:37:12,508 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 06:42:05] 2025-06-06 04:37:12,508 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 06:42:05] 2025-06-06 04:37:12,508 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 06:42:05] 2025-06-06 04:37:12,508 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 06:42:05] 2025-06-06 04:37:12,508 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 06:42:05] 2025-06-06 04:37:12,508 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 06:42:05] 2025-06-06 04:37:12,508 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 06:42:05] 2025-06-06 04:37:12,508 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 06:42:05] 2025-06-06 04:37:12,509 | INFO     | job 6679117826 has completed (purged errors)
[2025-06-06 06:42:05] 2025-06-06 04:37:12,509 | INFO     | overall cleanup function is called
[2025-06-06 06:42:05] 2025-06-06 04:37:13,517 | INFO     | --- collectZombieJob: --- 10, [623472]
[2025-06-06 06:42:05] 2025-06-06 04:37:13,517 | INFO     | zombie collector waiting for pid 623472
[2025-06-06 06:42:05] 2025-06-06 04:37:13,517 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 06:42:05] 2025-06-06 04:37:13,517 | INFO     | collected zombie processes
[2025-06-06 06:42:05] 2025-06-06 04:37:13,517 | INFO     | will attempt to kill all subprocesses of pid=623472
[2025-06-06 06:42:05] 2025-06-06 04:37:13,781 | INFO     | process IDs to be killed: [623472] (in reverse order)
[2025-06-06 06:42:05] 2025-06-06 04:37:13,854 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 06:42:05] 2025-06-06 04:37:13,855 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 06:42:05] 2025-06-06 04:37:13,863 | INFO     | did not find any defunct processes belonging to 623472
[2025-06-06 06:42:05] 2025-06-06 04:37:13,871 | INFO     | did not find any defunct processes belonging to 623472
[2025-06-06 06:42:05] 2025-06-06 04:37:13,871 | INFO     | ready for new job
[2025-06-06 06:42:05] 2025-06-06 04:37:13,871 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 06:42:05] 2025-06-06 04:37:13,873 | INFO     | **************************************
[2025-06-06 06:42:05] 2025-06-06 04:37:13,873 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 06:42:05] 2025-06-06 04:37:13,874 | INFO     | **************************************
[2025-06-06 06:42:05] 2025-06-06 04:37:13,874 | INFO     | 
[2025-06-06 06:42:05] 2025-06-06 04:37:13,876 | INFO     | architecture information:
[2025-06-06 06:42:05] 2025-06-06 04:37:13,877 | INFO     | executing command: cat /etc/os-release
[2025-06-06 06:42:05] 2025-06-06 04:37:13,889 | INFO     | cat /etc/os-release:
[2025-06-06 06:42:05] NAME="CentOS Linux"
[2025-06-06 06:42:05] VERSION="7 (Core)"
[2025-06-06 06:42:05] ID="centos"
[2025-06-06 06:42:05] ID_LIKE="rhel fedora"
[2025-06-06 06:42:05] VERSION_ID="7"
[2025-06-06 06:42:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 06:42:05] ANSI_COLOR="0;31"
[2025-06-06 06:42:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 06:42:05] HOME_URL="https://www.centos.org/"
[2025-06-06 06:42:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 06:42:05] 
[2025-06-06 06:42:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 06:42:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 06:42:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 06:42:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 06:42:05] 
[2025-06-06 06:42:05] 2025-06-06 04:37:13,890 | INFO     | **************************************
[2025-06-06 06:42:05] 2025-06-06 04:37:14,393 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-06-06 06:42:05] 2025-06-06 04:37:14,408 | INFO     | sufficient remaining disk space (1643252809728 B)
[2025-06-06 06:42:05] 2025-06-06 04:37:14,408 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 06:42:05] 2025-06-06 04:37:14,408 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 06:42:05] 2025-06-06 04:37:14,408 | INFO     | update_server=False
[2025-06-06 06:42:05] 2025-06-06 04:37:14,409 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 06:42:05] 2025-06-06 04:37:14,409 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 06:42:05] 2025-06-06 04:37:14,663 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 06:42:05] 2025-06-06 04:37:14,664 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 06:42:05] 2025-06-06 04:37:14,664 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 06:42:05] 2025-06-06 04:37:14,791 | INFO     | all payload control threads have been joined
[2025-06-06 06:42:05] 2025-06-06 04:37:14,800 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 06:42:05] 2025-06-06 04:37:14,801 | INFO     | aborting loop
[2025-06-06 06:42:05] 2025-06-06 04:37:15,269 | INFO     | all job control threads have been joined
[2025-06-06 06:42:05] 2025-06-06 04:37:15,414 | INFO     | [job] retrieve thread has finished
[2025-06-06 06:42:05] 2025-06-06 04:37:15,427 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 06:42:05] 2025-06-06 04:37:15,473 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 06:42:05] 2025-06-06 04:37:15,478 | INFO     | [payload] validate_post thread has finished
[2025-06-06 06:42:05] 2025-06-06 04:37:15,494 | INFO     | all data control threads have been joined
[2025-06-06 06:42:05] 2025-06-06 04:37:15,796 | INFO     | [payload] control thread has finished
[2025-06-06 06:42:05] 2025-06-06 04:37:15,805 | INFO     | [job] job monitor thread has finished
[2025-06-06 06:42:05] 2025-06-06 04:37:15,910 | INFO     | [payload] failed_post thread has finished
[2025-06-06 06:42:05] 2025-06-06 04:37:16,270 | INFO     | [job] control thread has finished
[2025-06-06 06:42:05] 2025-06-06 04:37:16,302 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 06:42:05] 2025-06-06 04:37:16,342 | INFO     | [data] copytool_in thread has finished
[2025-06-06 06:42:05] 2025-06-06 04:37:16,414 | INFO     | [data] copytool_out thread has finished
[2025-06-06 06:42:05] 2025-06-06 04:37:16,500 | INFO     | [data] control thread has finished
[2025-06-06 06:42:05] 2025-06-06 04:37:16,760 | INFO     | [job] validate thread has finished
[2025-06-06 06:42:05] 2025-06-06 04:37:16,855 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 06:42:05] 2025-06-06 04:37:17,209 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 06:42:05] 2025-06-06 04:37:17,762 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 06:42:05] 2025-06-06 04:37:18,214 | INFO     | [job] queue monitor thread has finished
[2025-06-06 06:42:05] 2025-06-06 04:37:21,765 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 06:42:05] 2025-06-06 04:37:23,486 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22608881035072)>', '<ExcThread(monitor, started 22608170972928)>']
[2025-06-06 06:42:05] 2025-06-06 04:37:23,706 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 06:42:05] 2025-06-06 04:37:23,706 | INFO     | [monitor] control thread has ended
[2025-06-06 06:42:05] 2025-06-06 04:37:28,512 | INFO     | all workflow threads have been joined
[2025-06-06 06:42:05] 2025-06-06 04:37:28,512 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 06:42:05] 2025-06-06 04:37:28,513 | INFO     | traces error code: 0
[2025-06-06 06:42:05] 2025-06-06 04:37:28,513 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 06:42:05] 2025-06-06 04:37:28,643 [wrapper] ==== pilot stdout END ====
[2025-06-06 06:42:05] 2025-06-06 04:37:28,646 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 06:42:05] 2025-06-06 04:37:28,648 [wrapper] pilotpid: 616612
[2025-06-06 06:42:05] 2025-06-06 04:37:28,650 [wrapper] Pilot exit status: 0
[2025-06-06 06:42:05] 2025-06-06 04:37:28,660 [wrapper] pandaids: 6679117826
[2025-06-06 06:42:05] 2025-06-06 04:37:28,709 [wrapper] cleanup supervisor_pilot  784850 616613
[2025-06-06 06:42:05] 2025-06-06 04:37:28,712 [wrapper] Test setup, not cleaning
[2025-06-06 06:42:05] 2025-06-06 04:37:28,714 [wrapper] apfmon messages muted
[2025-06-06 06:42:05] 2025-06-06 04:37:28,717 [wrapper] ==== wrapper stdout END ====
[2025-06-06 06:42:05] 2025-06-06 04:37:28,719 [wrapper] ==== wrapper stderr END ====
[2025-06-06 06:42:05]  *** Error codes and diagnostics ***
[2025-06-06 06:42:05]     "exeErrorCode": 0,
[2025-06-06 06:42:05]     "exeErrorDiag": "",
[2025-06-06 06:42:05]     "pilotErrorCode": 0,
[2025-06-06 06:42:05]     "pilotErrorDiag": "",
[2025-06-06 06:42:05]  *** Listing of results directory ***
[2025-06-06 06:42:05] total 393520
[2025-06-06 06:42:05] -rw-r--r-- 1 boinc boinc    495897 Jun  4 10:46 pilot3.tar.gz
[2025-06-06 06:42:05] -rw-r--r-- 1 boinc boinc      5111 Jun  4 10:48 queuedata.json
[2025-06-06 06:42:05] -rwx------ 1 boinc boinc     37140 Jun  4 10:48 runpilot2-wrapper.sh
[2025-06-06 06:42:05] -rw-r--r-- 1 boinc boinc       100 Jun  6 03:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 06:42:05] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 03:40 run_atlas
[2025-06-06 06:42:05] -rw-r--r-- 1 boinc boinc       105 Jun  6 03:40 job.xml
[2025-06-06 06:42:05] -rw-r--r-- 2 boinc boinc 219121329 Jun  6 03:40 EVNT.45006593._001034.pool.root.1
[2025-06-06 06:42:05] -rw-r--r-- 1 boinc boinc      6422 Jun  6 03:40 init_data.xml
[2025-06-06 06:42:05] -rw-r--r-- 2 boinc boinc     15093 Jun  6 03:40 start_atlas.sh
[2025-06-06 06:42:05] drwxrwx--x 2 boinc boinc      4096 Jun  6 03:40 shared
[2025-06-06 06:42:05] -rw-r--r-- 2 boinc boinc    508888 Jun  6 03:40 input.tar.gz
[2025-06-06 06:42:05] -rw-r--r-- 1 boinc boinc         0 Jun  6 03:40 boinc_lockfile
[2025-06-06 06:42:05] -rw-r--r-- 1 boinc boinc      2525 Jun  6 03:40 pandaJob.out
[2025-06-06 06:42:05] -rw------- 1 boinc boinc    987721 Jun  6 03:40 agis_schedconf.cvmfs.json
[2025-06-06 06:42:05] -rw------- 1 boinc boinc   1598969 Jun  6 03:40 agis_ddmendpoints.agis.ALL.json
[2025-06-06 06:42:05] drwx------ 4 boinc boinc      4096 Jun  6 03:40 pilot3
[2025-06-06 06:42:05] -rw------- 1 boinc boinc        95 Jun  6 06:36 pilot_heartbeat.json
[2025-06-06 06:42:05] -rw------- 1 boinc boinc 177419405 Jun  6 06:36 HITS.45006595._055872.pool.root.1
[2025-06-06 06:42:05] -rw-r--r-- 1 boinc boinc       528 Jun  6 06:36 boinc_task_state.xml
[2025-06-06 06:42:05] -rw------- 1 boinc boinc      1035 Jun  6 06:37 memory_monitor_summary.json
[2025-06-06 06:42:05] -rw------- 1 boinc boinc    295234 Jun  6 06:37 log.45006595._055872.job.log.tgz.1
[2025-06-06 06:42:05] -rw------- 1 boinc boinc      7726 Jun  6 06:37 heartbeat.json
[2025-06-06 06:42:05] -rw------- 1 boinc boinc      4364 Jun  6 06:37 pilotlog.txt
[2025-06-06 06:42:05] -rw------- 1 boinc boinc    995973 Jun  6 06:37 log.45006595._055872.job.log.1
[2025-06-06 06:42:05] -rw------- 1 boinc boinc       357 Jun  6 06:37 output.list
[2025-06-06 06:42:05] -rw-r--r-- 1 boinc boinc       620 Jun  6 06:37 runtime_log
[2025-06-06 06:42:05] -rw------- 1 boinc boinc   1310720 Jun  6 06:37 result.tar.gz
[2025-06-06 06:42:05] -rw-r--r-- 1 boinc boinc      9026 Jun  6 06:37 runtime_log.err
[2025-06-06 06:42:05] -rw------- 1 boinc boinc       665 Jun  6 06:37 D3ZNDm3yyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgpnKDm4cgpAn.diag
[2025-06-06 06:42:05] -rw-r--r-- 1 boinc boinc        26 Jun  6 06:41 wrapper_checkpoint.txt
[2025-06-06 06:42:05] -rw-r--r-- 1 boinc boinc      8192 Jun  6 06:42 boinc_mmap_file
[2025-06-06 06:42:05] -rw-r--r-- 1 boinc boinc     20954 Jun  6 06:42 stderr.txt
[2025-06-06 06:42:05] HITS file was successfully produced:
[2025-06-06 06:42:05] -rw------- 1 boinc boinc 177419405 Jun  6 06:36 shared/HITS.pool.root.1
[2025-06-06 06:42:05]  *** Contents of shared directory: ***
[2025-06-06 06:42:05] total 389056
[2025-06-06 06:42:05] -rw-r--r-- 2 boinc boinc 219121329 Jun  6 03:40 ATLAS.root_0
[2025-06-06 06:42:05] -rw-r--r-- 2 boinc boinc     15093 Jun  6 03:40 start_atlas.sh
[2025-06-06 06:42:05] -rw-r--r-- 2 boinc boinc    508888 Jun  6 03:40 input.tar.gz
[2025-06-06 06:42:05] -rw------- 1 boinc boinc 177419405 Jun  6 06:36 HITS.pool.root.1
[2025-06-06 06:42:05] -rw------- 1 boinc boinc   1310720 Jun  6 06:37 result.tar.gz
06:42:07 (613025): run_atlas exited; CPU time 40676.838828
06:42:07 (613025): called boinc_finish(0)

</stderr_txt>
]]>

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