Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-04 05:48:43 (24360): Detected: vboxwrapper 26206
2025-06-04 05:48:43 (24360): Detected: BOINC client v8.0.2
2025-06-04 05:48:44 (24360): Detected: VirtualBox VboxManage Interface (Version: 7.0.10)
2025-06-04 05:48:45 (24360): Successfully copied 'init_data.xml' to the shared directory.
2025-06-04 05:48:45 (24360): Create VM. (boinc_b6c8eb0983cfd4b4, slot#2)
2025-06-04 05:48:46 (24360): Setting Memory Size for VM. (4800MB)
2025-06-04 05:48:47 (24360): Setting CPU Count for VM. (8)
2025-06-04 05:48:48 (24360): Setting Chipset Options for VM.
2025-06-04 05:48:48 (24360): Setting Graphics Controller Options for VM.
2025-06-04 05:48:49 (24360): Setting Boot Options for VM.
2025-06-04 05:48:49 (24360): Setting Network Configuration for NAT.
2025-06-04 05:48:49 (24360): Enabling VM Network Access.
2025-06-04 05:48:50 (24360): Disabling USB Support for VM.
2025-06-04 05:48:50 (24360): Disabling COM Port Support for VM.
2025-06-04 05:48:51 (24360): Disabling LPT Port Support for VM.
2025-06-04 05:48:51 (24360): Disabling Audio Support for VM.
2025-06-04 05:48:51 (24360): Disabling Clipboard Support for VM.
2025-06-04 05:48:52 (24360): Disabling Drag and Drop Support for VM.
2025-06-04 05:48:52 (24360): Adding storage controller(s) to VM.
2025-06-04 05:48:52 (24360): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-04 05:48:56 (24360): Adding VirtualBox Guest Additions to VM.
2025-06-04 05:48:56 (24360): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-04 05:48:56 (24360): forwarding host port 59226 to guest port 80
2025-06-04 05:48:57 (24360): Enabling remote desktop for VM.
2025-06-04 05:48:57 (24360): Enabling shared directory for VM.
2025-06-04 05:48:58 (24360): Starting VM using VBoxManage interface. (boinc_b6c8eb0983cfd4b4, slot#2)
2025-06-04 05:49:04 (24360): Successfully started VM. (PID = '28808')
2025-06-04 05:49:04 (24360): Reporting VM Process ID to BOINC.
2025-06-04 05:49:04 (24360): Guest Log: BIOS: VirtualBox 7.0.10
2025-06-04 05:49:04 (24360): Guest Log: CPUID EDX: 0x178bfbff
2025-06-04 05:49:04 (24360): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-04 05:49:04 (24360): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-04 05:49:04 (24360): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-04 05:49:04 (24360): Detected: Web Application Enabled (http://localhost:59226)
2025-06-04 05:49:04 (24360): Detected: Remote Desktop Enabled (localhost:59227)
2025-06-04 05:49:04 (24360): Preference change detected
2025-06-04 05:49:04 (24360): Setting CPU throttle for VM. (100%)
2025-06-04 05:49:04 (24360): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-04 05:49:06 (24360): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-04 05:49:06 (24360): Guest Log: BIOS: Booting from Hard Disk...
2025-06-04 05:49:09 (24360): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-04 05:49:09 (24360): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-04 05:49:09 (24360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-04 05:49:20 (24360): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-04 05:49:20 (24360): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-04 05:49:40 (24360): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-04 05:49:40 (24360): Guest Log: 00:00:00.000091 main     Log opened 2025-06-04T05:49:39.293593000Z
2025-06-04 05:49:40 (24360): Guest Log: 00:00:00.000186 main     OS Product: Linux
2025-06-04 05:49:40 (24360): Guest Log: 00:00:00.000217 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-04 05:49:40 (24360): Guest Log: 00:00:00.000245 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-04 05:49:40 (24360): Guest Log: 00:00:00.000273 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-04 05:49:40 (24360): Guest Log: 00:00:00.000274 main     Process ID: 1369
2025-06-04 05:49:40 (24360): Guest Log: 00:00:00.000274 main     Package type: LINUX_64BITS_GENERIC
2025-06-04 05:49:40 (24360): Guest Log: 00:00:00.000779 main     5.2.32 r132073 started. Verbose level = 0
2025-06-04 05:49:41 (24360): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-04 05:49:41 (24360): Guest Log: [INFO] Mounting shared directory
2025-06-04 05:49:41 (24360): Guest Log: [INFO] Checking for init_data.xml
2025-06-04 05:49:45 (24360): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-04 05:49:45 (24360): Guest Log: [INFO] Detected branch: prod
2025-06-04 05:49:46 (24360): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-04 05:49:46 (24360): Guest Log: Copying input files
2025-06-04 05:49:47 (24360): Guest Log: Copied input files into RunAtlas.
2025-06-04 05:49:47 (24360): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-04 05:49:47 (24360): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-04 05:49:47 (24360): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-04 05:49:47 (24360): Guest Log: Further information can be found at the LHC@home message board.
2025-06-04 05:49:50 (24360): Guest Log: 00:00:10.190193 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 210 899 347 000ns (GuestNow=1 749 041 390 195 486 000 ns GuestLast=1 749 016 179 296 139 000 ns fSetTimeLastLoop=true )
2025-06-04 05:49:55 (24360): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-04 05:49:56 (24360): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-04 05:49:56 (24360): Guest Log: 2.6.3.0 1647 0 32164 146780 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-06-04 05:49:59 (24360): Guest Log: copied the webapp to /var/www
2025-06-04 05:49:59 (24360): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-04 05:49:59 (24360): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-04 05:49:59 (24360): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-04 05:50:00 (24360): Guest Log:  *** Starting ATLAS job. (PandaID=6679304670 taskID=45006595) ***
2025-06-04 06:55:11 (24360): Guest Log:  *** Job finished ***
2025-06-04 06:55:12 (24360): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-04 06:55:12 (24360): Guest Log: 2025-06-04 13:54:55,464 | INFO     | [data] queue_monitor thread has finished
2025-06-04 06:55:13 (24360): Guest Log: 2025-06-04 13:54:57,691 | INFO     | job.realtimelogging is not enabled
2025-06-04 06:55:13 (24360): Guest Log: 2025-06-04 13:54:58,692 | INFO     | [payload] run_realtimelog thread has finished
2025-06-04 06:55:13 (24360): Guest Log: 2025-06-04 13:55:00,981 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140007882725184)>', '<ExcThread(monitor, started 140006932866816)>']
2025-06-04 06:55:13 (24360): Guest Log: 2025-06-04 13:55:01,700 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-04 06:55:13 (24360): Guest Log: 2025-06-04 13:55:01,700 | INFO     | [monitor] control thread has ended
2025-06-04 06:55:13 (24360): Guest Log: 2025-06-04 13:55:06,015 | INFO     | all workflow threads have been joined
2025-06-04 06:55:13 (24360): Guest Log: 2025-06-04 13:55:06,015 | INFO     | end of generic workflow (traces error code: 0)
2025-06-04 06:55:13 (24360): Guest Log: 2025-06-04 13:55:06,015 | INFO     | traces error code: 0
2025-06-04 06:55:13 (24360): Guest Log: 2025-06-04 13:55:06,015 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-04 06:55:13 (24360): Guest Log: 2025-06-04 13:55:06,288 [wrapper] ==== pilot stdout END ====
2025-06-04 06:55:13 (24360): Guest Log: 2025-06-04 13:55:06,293 [wrapper] ==== wrapper stdout RESUME ====
2025-06-04 06:55:13 (24360): Guest Log: 2025-06-04 13:55:06,297 [wrapper] pilotpid: 6000
2025-06-04 06:55:13 (24360): Guest Log: 2025-06-04 13:55:06,301 [wrapper] Pilot exit status: 0
2025-06-04 06:55:13 (24360): Guest Log: 2025-06-04 13:55:06,799 [wrapper] pandaids: 6679304670
2025-06-04 06:55:13 (24360): Guest Log: 2025-06-04 13:55:06,823 [wrapper] cleanup supervisor_pilot 31523 6001
2025-06-04 06:55:13 (24360): Guest Log: 2025-06-04 13:55:06,827 [wrapper] Test setup, not cleaning
2025-06-04 06:55:13 (24360): Guest Log: 2025-06-04 13:55:06,831 [wrapper] apfmon messages muted
2025-06-04 06:55:13 (24360): Guest Log: 2025-06-04 13:55:06,834 [wrapper] ==== wrapper stdout END ====
2025-06-04 06:55:13 (24360): Guest Log: 2025-06-04 13:55:06,838 [wrapper] ==== wrapper stderr END ====
2025-06-04 06:55:13 (24360): Guest Log:  *** Error codes and diagnostics ***
2025-06-04 06:55:13 (24360): Guest Log:     "exeErrorCode": 0,
2025-06-04 06:55:13 (24360): Guest Log:     "exeErrorDiag": "",
2025-06-04 06:55:13 (24360): Guest Log:     "pilotErrorCode": 0,
2025-06-04 06:55:13 (24360): Guest Log:     "pilotErrorDiag": "",
2025-06-04 06:55:13 (24360): Guest Log:  *** Listing of results directory ***
2025-06-04 06:55:13 (24360): Guest Log: total 178120
2025-06-04 06:55:13 (24360): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  4 08:46 pilot3.tar.gz
2025-06-04 06:55:13 (24360): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  4 08:56 queuedata.json
2025-06-04 06:55:13 (24360): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  4 08:57 runpilot2-wrapper.sh
2025-06-04 06:55:13 (24360): Guest Log: -rwxr-xr-x. 1 atlas atlas      9285 Jun  4 12:49 init_data.xml
2025-06-04 06:55:13 (24360): Guest Log: -rwxr-xr-x. 1 atlas atlas    508885 Jun  4 12:49 input.tar.gz
2025-06-04 06:55:13 (24360): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  4 12:49 start_atlas.sh
2025-06-04 06:55:13 (24360): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  4 12:49 EVNT.45006593._001064.pool.root.1 -> /data/./ATLAS.root_0
2025-06-04 06:55:13 (24360): Guest Log: -rw-r--r--. 1 atlas atlas      2525 Jun  4 12:49 pandaJob.out
2025-06-04 06:55:13 (24360): Guest Log: -rw-------. 1 atlas atlas    986811 Jun  4 12:50 agis_schedconf.cvmfs.json
2025-06-04 06:55:13 (24360): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  4 12:50 agis_ddmendpoints.agis.ALL.json
2025-06-04 06:55:13 (24360): Guest Log: drwx------. 4 atlas atlas      4096 Jun  4 12:51 pilot3
2025-06-04 06:55:13 (24360): Guest Log: -rw-------. 1 atlas atlas 177322747 Jun  4 13:53 HITS.45006595._056133.pool.root.1
2025-06-04 06:55:13 (24360): Guest Log: -rw-------. 1 atlas atlas        95 Jun  4 13:54 pilot_heartbeat.json
2025-06-04 06:55:13 (24360): Guest Log: -rw-------. 1 atlas atlas      1025 Jun  4 13:54 memory_monitor_summary.json
2025-06-04 06:55:13 (24360): Guest Log: -rw-------. 1 atlas atlas    290538 Jun  4 13:54 log.45006595._056133.job.log.tgz.1
2025-06-04 06:55:13 (24360): Guest Log: -rw-------. 1 atlas atlas      7705 Jun  4 13:54 heartbeat.json
2025-06-04 06:55:13 (24360): Guest Log: -rw-------. 1 atlas atlas      4485 Jun  4 13:55 pilotlog.txt
2025-06-04 06:55:13 (24360): Guest Log: -rw-------. 1 atlas atlas    366229 Jun  4 13:55 log.45006595._056133.job.log.1
2025-06-04 06:55:13 (24360): Guest Log: -rw-------. 1 atlas atlas       357 Jun  4 13:55 output.list
2025-06-04 06:55:13 (24360): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  4 13:55 runtime_log
2025-06-04 06:55:13 (24360): Guest Log: -rw-------. 1 atlas atlas    675840 Jun  4 13:55 result.tar.gz
2025-06-04 06:55:13 (24360): Guest Log: -rw-r--r--. 1 atlas atlas      8583 Jun  4 13:55 runtime_log.err
2025-06-04 06:55:13 (24360): Guest Log: -rw-------. 1 atlas atlas       649 Jun  4 13:55 gQFNDmU7yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmysnKDmdIUW9m.diag
2025-06-04 06:55:13 (24360): Guest Log: Looking for outputfile HITS.45006595._056133.pool.root.1
2025-06-04 06:55:13 (24360): Guest Log: HITS file was successfully produced
2025-06-04 06:55:13 (24360): Guest Log: -rw-------. 1 atlas atlas 177322747 Jun  4 13:53 /home/atlas/RunAtlas/HITS.45006595._056133.pool.root.1
2025-06-04 06:55:16 (24360): Guest Log: Successfully finished the ATLAS job!
2025-06-04 06:55:16 (24360): Guest Log: Copying the results back to the shared directory!
2025-06-04 06:55:16 (24360): Guest Log:  *** Contents of shared directory: ***
2025-06-04 06:55:16 (24360): Guest Log: total 383276
2025-06-04 06:55:16 (24360): Guest Log: -rwxrwxrwx. 1 root root 213934058 Jun  4 12:48 ATLAS.root_0
2025-06-04 06:55:16 (24360): Guest Log: -rwxrwxrwx. 1 root root 177322747 Jun  4  2025 HITS.pool.root.1
2025-06-04 06:55:16 (24360): Guest Log: -rwxrwxrwx. 1 root root      9285 Jun  4 12:48 init_data.xml
2025-06-04 06:55:16 (24360): Guest Log: -rwxrwxrwx. 1 root root    508885 Jun  4 12:47 input.tar.gz
2025-06-04 06:55:16 (24360): Guest Log: -rwxrwxrwx. 1 root root    675840 Jun  4  2025 result.tar.gz
2025-06-04 06:55:16 (24360): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  4 12:47 start_atlas.sh
2025-06-04 06:55:16 (24360): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-04 06:55:16 (24360): VM Completion File Detected.
2025-06-04 06:55:16 (24360): Powering off VM.
2025-06-04 06:55:19 (24360): Successfully stopped VM.
2025-06-04 06:55:19 (24360): Deregistering VM. (boinc_b6c8eb0983cfd4b4, slot#2)
2025-06-04 06:55:19 (24360): Removing network bandwidth throttle group from VM.
2025-06-04 06:55:33 (24360): Removing VM from VirtualBox.
06:55:39 (24360): called boinc_finish(0)

</stderr_txt>
]]>

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