Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:09:53 (26520): wrapper (7.7.26015): starting
23:09:53 (26520): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 23:09:53] Arguments: --nthreads 8
[2025-06-04 23:09:53] Threads: 8
[2025-06-04 23:09:53] Checking for CVMFS
[2025-06-04 23:09:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 23:09:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 23:09:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 23:09:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 23:09:55] 2.11.2.0 14868 33856 99780 146793 1 59 17080051 25165825 2362 130560 0 17506567 99.769 21168430 2596 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 23:09:55] CVMFS is ok
[2025-06-04 23:09:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 23:09:55] Checking for apptainer binary...
[2025-06-04 23:09:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 23:09:55] Running /usr/bin/apptainer --version
[2025-06-04 23:09:55] apptainer version 1.3.2-1.el7
[2025-06-04 23:09:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 23:40:20] cg-vwn478.simple-grid.lan
[2025-06-04 23:40:20] apptainer works
[2025-06-04 23:40:20] Set ATHENA_PROC_NUMBER=8
[2025-06-04 23:40:20] Set ATHENA_CORE_NUMBER=8
[2025-06-04 23:40:20] Starting ATLAS job with PandaID=6679186398
[2025-06-04 23:40:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 03:15:18]  *** The last 200 lines of the pilot log: ***
[2025-06-05 03:15:18] 2025-06-05 01:11:02,648 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 03:15:18] 2025-06-05 01:11:02,649 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 03:15:18] 2025-06-05 01:11:02,649 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 03:15:18] 2025-06-05 01:11:02,653 | INFO     | fitting pss+swap vs Time
[2025-06-05 03:15:18] 2025-06-05 01:11:02,654 | INFO     | sum of square deviations: 2263977332.5
[2025-06-05 03:15:18] 2025-06-05 01:11:02,655 | INFO     | sum of deviations: 59173321907.5
[2025-06-05 03:15:18] 2025-06-05 01:11:02,655 | INFO     | mean x: 1749079823.5
[2025-06-05 03:15:18] 2025-06-05 01:11:02,656 | INFO     | mean y: 2419853.4278350514
[2025-06-05 03:15:18] 2025-06-05 01:11:02,656 | INFO     | -- intersect: -45713083545.00506
[2025-06-05 03:15:18] 2025-06-05 01:11:02,656 | INFO     | intersect: -45713083545.00506
[2025-06-05 03:15:18] 2025-06-05 01:11:02,656 | INFO     | chi2: 5.5616979024295325
[2025-06-05 03:15:18] 2025-06-05 01:11:02,657 | INFO     | sum of square deviations: 2093397390.0
[2025-06-05 03:15:18] 2025-06-05 01:11:02,672 | INFO     | sum of deviations: 70161142076.99998
[2025-06-05 03:15:18] 2025-06-05 01:11:02,673 | INFO     | mean x: 1749079671.0
[2025-06-05 03:15:18] 2025-06-05 01:11:02,673 | INFO     | mean y: 2429437.671957672
[2025-06-05 03:15:18] 2025-06-05 01:11:02,673 | INFO     | -- intersect: -58618751560.84997
[2025-06-05 03:15:18] 2025-06-05 01:11:02,673 | INFO     | intersect: -58618751560.84997
[2025-06-05 03:15:18] 2025-06-05 01:11:02,673 | INFO     | chi2: 4.839730780041803
[2025-06-05 03:15:18] 2025-06-05 01:11:02,673 | INFO     | current chi2=4.839730780041803 (change=12.981056056143405 %)
[2025-06-05 03:15:18] 2025-06-05 01:11:02,674 | INFO     | right removable region: 188
[2025-06-05 03:15:18] 2025-06-05 01:11:02,674 | INFO     | sum of square deviations: 2093397390.0
[2025-06-05 03:15:18] 2025-06-05 01:11:02,675 | INFO     | sum of deviations: -3363434347.999996
[2025-06-05 03:15:18] 2025-06-05 01:11:02,676 | INFO     | mean x: 1749079976.0
[2025-06-05 03:15:18] 2025-06-05 01:11:02,676 | INFO     | mean y: 2475666.0529100527
[2025-06-05 03:15:18] 2025-06-05 01:11:02,676 | INFO     | -- intersect: 2812699705.1100183
[2025-06-05 03:15:18] 2025-06-05 01:11:02,676 | INFO     | intersect: 2812699705.1100183
[2025-06-05 03:15:18] 2025-06-05 01:11:02,676 | INFO     | chi2: 1.3438582400527632
[2025-06-05 03:15:18] 2025-06-05 01:11:02,676 | INFO     | current chi2=1.3438582400527632 (change=75.83726653931127 %)
[2025-06-05 03:15:18] 2025-06-05 01:11:02,677 | INFO     | sum of square deviations: 1931608310.0
[2025-06-05 03:15:18] 2025-06-05 01:11:02,678 | INFO     | sum of deviations: -19942902294.5
[2025-06-05 03:15:18] 2025-06-05 01:11:02,678 | INFO     | mean x: 1749080128.5
[2025-06-05 03:15:18] 2025-06-05 01:11:02,678 | INFO     | mean y: 2491110.7663043477
[2025-06-05 03:15:18] 2025-06-05 01:11:02,678 | INFO     | -- intersect: 18060880033.273582
[2025-06-05 03:15:18] 2025-06-05 01:11:02,678 | INFO     | intersect: 18060880033.273582
[2025-06-05 03:15:18] 2025-06-05 01:11:02,679 | INFO     | chi2: 0.8740213719761649
[2025-06-05 03:15:18] 2025-06-05 01:11:02,679 | INFO     | current chi2=0.8740213719761649 (change=34.96178793814973 %)
[2025-06-05 03:15:18] 2025-06-05 01:11:02,679 | INFO     | sum of square deviations: 1778377530.0
[2025-06-05 03:15:18] 2025-06-05 01:11:02,681 | INFO     | sum of deviations: -13940530629.000002
[2025-06-05 03:15:18] 2025-06-05 01:11:02,681 | INFO     | mean x: 1749080281.0
[2025-06-05 03:15:18] 2025-06-05 01:11:02,681 | INFO     | mean y: 2485128.8268156424
[2025-06-05 03:15:18] 2025-06-05 01:11:02,681 | INFO     | -- intersect: 13713357437.17207
[2025-06-05 03:15:18] 2025-06-05 01:11:02,681 | INFO     | intersect: 13713357437.17207
[2025-06-05 03:15:18] 2025-06-05 01:11:02,681 | INFO     | chi2: 0.847288617941638
[2025-06-05 03:15:18] 2025-06-05 01:11:02,682 | INFO     | current chi2=0.847288617941638 (change=3.0585927177139927 %)
[2025-06-05 03:15:18] 2025-06-05 01:11:02,682 | INFO     | left removable region: 30
[2025-06-05 03:15:18] 2025-06-05 01:11:02,682 | INFO     | sum of square deviations: 1223016419.5
[2025-06-05 03:15:18] 2025-06-05 01:11:02,683 | INFO     | sum of deviations: 2713280457.5
[2025-06-05 03:15:18] 2025-06-05 01:11:02,683 | INFO     | mean x: 1749080555.5
[2025-06-05 03:15:18] 2025-06-05 01:11:02,683 | INFO     | mean y: 2492248.917721519
[2025-06-05 03:15:18] 2025-06-05 01:11:02,683 | INFO     | -- intersect: -3877869465.090644
[2025-06-05 03:15:18] 2025-06-05 01:11:02,684 | INFO     | intersect: -3877869465.090644
[2025-06-05 03:15:18] 2025-06-05 01:11:02,684 | INFO     | chi2: 0.0010269450514603777
[2025-06-05 03:15:18] 2025-06-05 01:11:02,684 | INFO     | -- intersect: -3877869465.090644
[2025-06-05 03:15:18] 2025-06-05 01:11:02,684 | INFO     | current memory leak: 2.22 B/s (using 158 data points, chi2=0.00)
[2025-06-05 03:15:18] 2025-06-05 01:11:02,685 | INFO     | ..............................
[2025-06-05 03:15:18] 2025-06-05 01:11:02,685 | INFO     | . Timing measurements:
[2025-06-05 03:15:18] 2025-06-05 01:11:02,685 | INFO     | . get job = 0 s
[2025-06-05 03:15:18] 2025-06-05 01:11:02,685 | INFO     | . initial setup = 9 s
[2025-06-05 03:15:18] 2025-06-05 01:11:02,685 | INFO     | . payload setup = 172 s
[2025-06-05 03:15:18] 2025-06-05 01:11:02,685 | INFO     | . stage-in = 0 s
[2025-06-05 03:15:18] 2025-06-05 01:11:02,686 | INFO     | . payload execution = 11974 s
[2025-06-05 03:15:18] 2025-06-05 01:11:02,686 | INFO     | . stage-out = 3 s
[2025-06-05 03:15:18] 2025-06-05 01:11:02,686 | INFO     | . log creation = 1 s
[2025-06-05 03:15:18] 2025-06-05 01:11:02,686 | INFO     | ..............................
[2025-06-05 03:15:18] 2025-06-05 01:11:03,212 | INFO     | 
[2025-06-05 03:15:18] 2025-06-05 01:11:03,212 | INFO     | job summary report
[2025-06-05 03:15:18] 2025-06-05 01:11:03,212 | INFO     | --------------------------------------------------
[2025-06-05 03:15:18] 2025-06-05 01:11:03,212 | INFO     | PanDA job id: 6679186398
[2025-06-05 03:15:18] 2025-06-05 01:11:03,212 | INFO     | task id: 45006595
[2025-06-05 03:15:18] 2025-06-05 01:11:03,212 | INFO     | errors: (none)
[2025-06-05 03:15:18] 2025-06-05 01:11:03,212 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 03:15:18] 2025-06-05 01:11:03,212 | INFO     | pilot state: finished 
[2025-06-05 03:15:18] 2025-06-05 01:11:03,212 | INFO     | transexitcode: 0
[2025-06-05 03:15:18] 2025-06-05 01:11:03,213 | INFO     | exeerrorcode: 0
[2025-06-05 03:15:18] 2025-06-05 01:11:03,213 | INFO     | exeerrordiag: 
[2025-06-05 03:15:18] 2025-06-05 01:11:03,213 | INFO     | exitcode: 0
[2025-06-05 03:15:18] 2025-06-05 01:11:03,213 | INFO     | exitmsg: OK
[2025-06-05 03:15:18] 2025-06-05 01:11:03,213 | INFO     | cpuconsumptiontime: 44634 s
[2025-06-05 03:15:18] 2025-06-05 01:11:03,213 | INFO     | nevents: 400
[2025-06-05 03:15:18] 2025-06-05 01:11:03,213 | INFO     | neventsw: 0
[2025-06-05 03:15:18] 2025-06-05 01:11:03,213 | INFO     | pid: 28587
[2025-06-05 03:15:18] 2025-06-05 01:11:03,213 | INFO     | pgrp: 28587
[2025-06-05 03:15:18] 2025-06-05 01:11:03,213 | INFO     | corecount: 8
[2025-06-05 03:15:18] 2025-06-05 01:11:03,213 | INFO     | event service: False
[2025-06-05 03:15:18] 2025-06-05 01:11:03,213 | INFO     | sizes: {0: 2396460, 1: 2397145, 2: 2397344, 13: 2397344, 23: 2397400, 34: 2397428, 45: 2397584, 55: 2397612, 66: 2397640, 77: 2397668, 88: 2397724, 94: 2398238, 98
[2025-06-05 03:15:18] 2025-06-05 01:11:03,214 | INFO     | --------------------------------------------------
[2025-06-05 03:15:18] 2025-06-05 01:11:03,214 | INFO     | 
[2025-06-05 03:15:18] 2025-06-05 01:11:03,214 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-06-05 03:15:18] 2025-06-05 01:11:03,772 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 03:15:18] 2025-06-05 01:11:03,773 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 03:15:18] 2025-06-05 01:11:03,773 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 03:15:18] 2025-06-05 01:11:03,773 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 03:15:18] 2025-06-05 01:11:03,773 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 03:15:18] 2025-06-05 01:11:03,773 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 03:15:18] 2025-06-05 01:11:03,773 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 03:15:18] 2025-06-05 01:11:03,774 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 03:15:18] 2025-06-05 01:11:03,774 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 03:15:18] 2025-06-05 01:11:03,774 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 03:15:18] 2025-06-05 01:11:03,774 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 03:15:18] 2025-06-05 01:11:03,774 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 03:15:18] 2025-06-05 01:11:03,774 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 03:15:18] 2025-06-05 01:11:03,774 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 03:15:18] 2025-06-05 01:11:03,774 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 03:15:18] 2025-06-05 01:11:03,774 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 03:15:18] 2025-06-05 01:11:03,775 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 03:15:18] 2025-06-05 01:11:03,775 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 03:15:18] 2025-06-05 01:11:03,775 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 03:15:18] 2025-06-05 01:11:03,775 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 03:15:18] 2025-06-05 01:11:03,775 | INFO     | job 6679186398 has completed (purged errors)
[2025-06-05 03:15:18] 2025-06-05 01:11:03,775 | INFO     | overall cleanup function is called
[2025-06-05 03:15:18] 2025-06-05 01:11:04,784 | INFO     | --- collectZombieJob: --- 10, [28587]
[2025-06-05 03:15:18] 2025-06-05 01:11:04,784 | INFO     | zombie collector waiting for pid 28587
[2025-06-05 03:15:18] 2025-06-05 01:11:04,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 03:15:18] 2025-06-05 01:11:04,784 | INFO     | collected zombie processes
[2025-06-05 03:15:18] 2025-06-05 01:11:04,784 | INFO     | will attempt to kill all subprocesses of pid=28587
[2025-06-05 03:15:18] 2025-06-05 01:11:04,902 | INFO     | process IDs to be killed: [28587] (in reverse order)
[2025-06-05 03:15:18] 2025-06-05 01:11:05,244 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 03:15:18] 2025-06-05 01:11:05,245 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 03:15:18] 2025-06-05 01:11:05,249 | INFO     | did not find any defunct processes belonging to 28587
[2025-06-05 03:15:18] 2025-06-05 01:11:05,252 | INFO     | did not find any defunct processes belonging to 28587
[2025-06-05 03:15:18] 2025-06-05 01:11:05,253 | INFO     | ready for new job
[2025-06-05 03:15:18] 2025-06-05 01:11:05,253 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 03:15:18] 2025-06-05 01:11:05,255 | INFO     | **************************************
[2025-06-05 03:15:18] 2025-06-05 01:11:05,255 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 03:15:18] 2025-06-05 01:11:05,255 | INFO     | **************************************
[2025-06-05 03:15:18] 2025-06-05 01:11:05,255 | INFO     | 
[2025-06-05 03:15:18] 2025-06-05 01:11:05,256 | INFO     | pilot is running in a VM
[2025-06-05 03:15:18] 2025-06-05 01:11:05,256 | INFO     | architecture information:
[2025-06-05 03:15:18] 2025-06-05 01:11:05,267 | INFO     | executing command: cat /etc/os-release
[2025-06-05 03:15:18] 2025-06-05 01:11:05,506 | INFO     | cat /etc/os-release:
[2025-06-05 03:15:18] NAME="CentOS Linux"
[2025-06-05 03:15:18] VERSION="7 (Core)"
[2025-06-05 03:15:18] ID="centos"
[2025-06-05 03:15:18] ID_LIKE="rhel fedora"
[2025-06-05 03:15:18] VERSION_ID="7"
[2025-06-05 03:15:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 03:15:18] ANSI_COLOR="0;31"
[2025-06-05 03:15:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 03:15:18] HOME_URL="https://www.centos.org/"
[2025-06-05 03:15:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 03:15:18] 
[2025-06-05 03:15:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 03:15:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 03:15:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 03:15:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 03:15:18] 
[2025-06-05 03:15:18] 2025-06-05 01:11:05,506 | INFO     | **************************************
[2025-06-05 03:15:18] 2025-06-05 01:11:06,010 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-06-05 03:15:18] 2025-06-05 01:11:06,255 | INFO     | sufficient remaining disk space (497215864832 B)
[2025-06-05 03:15:18] 2025-06-05 01:11:06,256 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 03:15:18] 2025-06-05 01:11:06,256 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 03:15:18] 2025-06-05 01:11:06,256 | INFO     | update_server=False
[2025-06-05 03:15:18] 2025-06-05 01:11:06,256 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 03:15:18] 2025-06-05 01:11:06,259 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 03:15:18] 2025-06-05 01:11:06,259 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 03:15:18] 2025-06-05 01:11:06,259 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 03:15:18] 2025-06-05 01:11:06,259 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 03:15:18] 2025-06-05 01:11:06,393 | INFO     | all payload control threads have been joined
[2025-06-05 03:15:18] 2025-06-05 01:11:06,604 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 03:15:18] 2025-06-05 01:11:06,605 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 03:15:18] 2025-06-05 01:11:06,605 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:15:18] 2025-06-05 01:11:06,605 | INFO     | will abort loop
[2025-06-05 03:15:18] 2025-06-05 01:11:06,618 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 03:15:18] 2025-06-05 01:11:06,865 | INFO     | all data control threads have been joined
[2025-06-05 03:15:18] 2025-06-05 01:11:07,263 | INFO     | [job] retrieve thread has finished
[2025-06-05 03:15:18] 2025-06-05 01:11:07,263 | INFO     | [job] validate thread has finished
[2025-06-05 03:15:18] 2025-06-05 01:11:07,382 | INFO     | all job control threads have been joined
[2025-06-05 03:15:18] 2025-06-05 01:11:07,399 | INFO     | [payload] control thread has finished
[2025-06-05 03:15:18] 2025-06-05 01:11:07,421 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 03:15:18] 2025-06-05 01:11:07,450 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 03:15:18] 2025-06-05 01:11:07,494 | INFO     | [payload] validate_post thread has finished
[2025-06-05 03:15:18] 2025-06-05 01:11:07,611 | INFO     | [job] job monitor thread has finished
[2025-06-05 03:15:18] 2025-06-05 01:11:07,849 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:15:18] 2025-06-05 01:11:07,872 | INFO     | [data] control thread has finished
[2025-06-05 03:15:18] 2025-06-05 01:11:07,893 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 03:15:18] 2025-06-05 01:11:07,959 | INFO     | [payload] failed_post thread has finished
[2025-06-05 03:15:18] 2025-06-05 01:11:08,388 | INFO     | [job] control thread has finished
[2025-06-05 03:15:18] 2025-06-05 01:11:08,409 | INFO     | [data] copytool_in thread has finished
[2025-06-05 03:15:18] 2025-06-05 01:11:08,625 | INFO     | [data] copytool_out thread has finished
[2025-06-05 03:15:18] 2025-06-05 01:11:08,684 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 03:15:18] 2025-06-05 01:11:08,855 | INFO     | [job] queue monitor thread has finished
[2025-06-05 03:15:18] 2025-06-05 01:11:09,145 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 03:15:18] 2025-06-05 01:11:13,154 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 03:15:18] 2025-06-05 01:11:15,002 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140547690534720)>', '<ExcThread(monitor, started 140546890786560)>']
[2025-06-05 03:15:18] 2025-06-05 01:11:15,311 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 03:15:18] 2025-06-05 01:11:15,312 | INFO     | [monitor] control thread has ended
[2025-06-05 03:15:18] 2025-06-05 01:11:20,028 | INFO     | all workflow threads have been joined
[2025-06-05 03:15:18] 2025-06-05 01:11:20,028 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 03:15:18] 2025-06-05 01:11:20,028 | INFO     | traces error code: 0
[2025-06-05 03:15:18] 2025-06-05 01:11:20,028 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 03:15:18] 2025-06-05 01:11:20,413 [wrapper] ==== pilot stdout END ====
[2025-06-05 03:15:18] 2025-06-05 01:11:20,510 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 03:15:18] 2025-06-05 01:11:20,559 [wrapper] pilotpid: 19709
[2025-06-05 03:15:18] 2025-06-05 01:11:20,612 [wrapper] Pilot exit status: 0
[2025-06-05 03:15:18] 2025-06-05 01:11:20,949 [wrapper] pandaids: 6679186398
[2025-06-05 03:15:18] 2025-06-05 01:11:21,003 [wrapper] cleanup supervisor_pilot 21649 19710
[2025-06-05 03:15:18] 2025-06-05 01:11:21,108 [wrapper] Test setup, not cleaning
[2025-06-05 03:15:18] 2025-06-05 01:11:21,181 [wrapper] apfmon messages muted
[2025-06-05 03:15:18] 2025-06-05 01:11:21,258 [wrapper] ==== wrapper stdout END ====
[2025-06-05 03:15:18] 2025-06-05 01:11:21,335 [wrapper] ==== wrapper stderr END ====
[2025-06-05 03:15:18]  *** Error codes and diagnostics ***
[2025-06-05 03:15:18]     "exeErrorCode": 0,
[2025-06-05 03:15:18]     "exeErrorDiag": "",
[2025-06-05 03:15:18]     "pilotErrorCode": 0,
[2025-06-05 03:15:18]     "pilotErrorDiag": "",
[2025-06-05 03:15:18]  *** Listing of results directory ***
[2025-06-05 03:15:18] total 385456
[2025-06-05 03:15:18] -rw-r--r--. 1 boinc boinc    495897 Jun  4 10:46 pilot3.tar.gz
[2025-06-05 03:15:18] -rw-r--r--. 1 boinc boinc      5111 Jun  4 10:51 queuedata.json
[2025-06-05 03:15:18] -rwx------. 1 boinc boinc     37140 Jun  4 10:52 runpilot2-wrapper.sh
[2025-06-05 03:15:18] -rw-r--r--. 1 boinc boinc       100 Jun  4 23:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 03:15:18] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 23:09 run_atlas
[2025-06-05 03:15:18] -rw-r--r--. 1 boinc boinc       105 Jun  4 23:09 job.xml
[2025-06-05 03:15:18] -rw-r--r--. 2 boinc boinc 214817479 Jun  4 23:09 EVNT.45006593._000532.pool.root.1
[2025-06-05 03:15:18] -rw-r--r--. 1 boinc boinc      6392 Jun  4 23:09 init_data.xml
[2025-06-05 03:15:18] -rw-r--r--. 2 boinc boinc     15093 Jun  4 23:09 start_atlas.sh
[2025-06-05 03:15:18] drwxrwx--x. 2 boinc boinc        68 Jun  4 23:09 shared
[2025-06-05 03:15:18] -rw-r--r--. 2 boinc boinc    508877 Jun  4 23:09 input.tar.gz
[2025-06-05 03:15:18] -rw-r--r--. 1 boinc boinc         0 Jun  4 23:09 boinc_lockfile
[2025-06-05 03:15:18] -rw-r--r--. 1 boinc boinc      2523 Jun  4 23:40 pandaJob.out
[2025-06-05 03:15:18] -rw-------. 1 boinc boinc    987032 Jun  4 23:43 agis_schedconf.cvmfs.json
[2025-06-05 03:15:18] drwx------. 4 boinc boinc      4096 Jun  4 23:43 pilot3
[2025-06-05 03:15:18] -rw-------. 1 boinc boinc 173227347 Jun  5 03:08 HITS.45006595._055971.pool.root.1
[2025-06-05 03:15:18] -rw-r--r--. 1 boinc boinc       531 Jun  5 03:08 boinc_task_state.xml
[2025-06-05 03:15:18] -rw-------. 1 boinc boinc      1015 Jun  5 03:09 memory_monitor_summary.json
[2025-06-05 03:15:18] -rw-------. 1 boinc boinc   1598969 Jun  5 03:09 agis_ddmendpoints.agis.ALL.json
[2025-06-05 03:15:18] -rw-------. 1 boinc boinc    354598 Jun  5 03:09 log.45006595._055971.job.log.tgz.1
[2025-06-05 03:15:18] -rw-------. 1 boinc boinc        95 Jun  5 03:10 pilot_heartbeat.json
[2025-06-05 03:15:18] -rw-------. 1 boinc boinc      7688 Jun  5 03:11 heartbeat.json
[2025-06-05 03:15:18] -rw-------. 1 boinc boinc      4725 Jun  5 03:11 pilotlog.txt
[2025-06-05 03:15:18] -rw-------. 1 boinc boinc   1066968 Jun  5 03:11 log.45006595._055971.job.log.1
[2025-06-05 03:15:18] -rw-------. 1 boinc boinc       357 Jun  5 03:11 output.list
[2025-06-05 03:15:18] -rw-r--r--. 1 boinc boinc       620 Jun  5 03:11 runtime_log
[2025-06-05 03:15:18] -rw-------. 1 boinc boinc   1443840 Jun  5 03:11 result.tar.gz
[2025-06-05 03:15:18] -rw-r--r--. 1 boinc boinc      8659 Jun  5 03:11 runtime_log.err
[2025-06-05 03:15:18] -rw-------. 1 boinc boinc       657 Jun  5 03:11 3sbNDmz1yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1qnKDm8Gf6Ro.diag
[2025-06-05 03:15:18] -rw-r--r--. 1 boinc boinc      8192 Jun  5 03:15 boinc_mmap_file
[2025-06-05 03:15:18] -rw-r--r--. 1 boinc boinc        28 Jun  5 03:15 wrapper_checkpoint.txt
[2025-06-05 03:15:18] -rw-r--r--. 1 boinc boinc     20532 Jun  5 03:15 stderr.txt
[2025-06-05 03:15:18] HITS file was successfully produced:
[2025-06-05 03:15:18] -rw-------. 1 boinc boinc 173227347 Jun  5 03:08 shared/HITS.pool.root.1
[2025-06-05 03:15:18]  *** Contents of shared directory: ***
[2025-06-05 03:15:18] total 380880
[2025-06-05 03:15:18] -rw-r--r--. 2 boinc boinc 214817479 Jun  4 23:09 ATLAS.root_0
[2025-06-05 03:15:18] -rw-r--r--. 2 boinc boinc     15093 Jun  4 23:09 start_atlas.sh
[2025-06-05 03:15:18] -rw-r--r--. 2 boinc boinc    508877 Jun  4 23:09 input.tar.gz
[2025-06-05 03:15:18] -rw-------. 1 boinc boinc 173227347 Jun  5 03:08 HITS.pool.root.1
[2025-06-05 03:15:18] -rw-------. 1 boinc boinc   1443840 Jun  5 03:11 result.tar.gz
03:15:20 (26520): run_atlas exited; CPU time 44793.305560
03:15:20 (26520): called boinc_finish(0)

</stderr_txt>
]]>

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