Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:44:24 (4062112): wrapper (7.7.26015): starting
08:44:24 (4062112): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:44:24] Arguments: --nthreads 8
[2025-06-04 08:44:24] Threads: 8
[2025-06-04 08:44:24] Checking for CVMFS
[2025-06-04 08:44:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:44:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:44:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:44:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:44:24] 2.12.6.0 2157222 23284 143376 146780 1 609 36572306 40960001 31907 16776704 0 299426449 99.786 162435153 36405 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:44:24] CVMFS is ok
[2025-06-04 08:44:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:44:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:44:24] Further information can be found at the LHC@home message board.
[2025-06-04 08:44:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:44:24] Checking for apptainer binary...
[2025-06-04 08:44:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:44:24] Running /usr/bin/apptainer --version
[2025-06-04 08:44:25] apptainer version 1.4.1-1.el9
[2025-06-04 08:44:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:44:25] c8-6-10.aglt2.org
[2025-06-04 08:44:25] apptainer works
[2025-06-04 08:44:25] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:44:25] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:44:25] Starting ATLAS job with PandaID=6679046404
[2025-06-04 08:44:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:35:55]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:35:55]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 09:35:55]  is_altstaged=None
[2025-06-04 09:35:55]  is_tar=False
[2025-06-04 09:35:55]  lfn=log.45006595._055807.job.log.tgz.1
[2025-06-04 09:35:55]  mtime=0
[2025-06-04 09:35:55]  protocol_id=None
[2025-06-04 09:35:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:35:55]  replicas=None
[2025-06-04 09:35:55]  scope=mc23_13p6TeV
[2025-06-04 09:35:55]  status=None
[2025-06-04 09:35:55]  status_code=0
[2025-06-04 09:35:55]  storage_token=
[2025-06-04 09:35:55]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6679046404/log.45006595._055807.job.log.tgz.1
[2025-06-04 09:35:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/51/log.45006595._055807.job.log.tgz.1
[2025-06-04 09:35:55]  workdir=None
[2025-06-04 09:35:55] ]
[2025-06-04 09:35:55] 2025-06-04 13:35:32,998 | INFO     | transferring file log.45006595._055807.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6679046404/log.45006595._055807.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:35:55] 2025-06-04 13:35:32,999 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6679046404/log.45006595._055807.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._055807.job
[2025-06-04 09:35:55] 2025-06-04 13:35:33,021 | INFO     | adding to output.list: log.45006595._055807.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/51/log.45006595._055807.job.log.tg
[2025-06-04 09:35:55] 2025-06-04 13:35:33,022 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:35:55] 2025-06-04 13:35:33,023 | INFO     | summary of transferred files:
[2025-06-04 09:35:55] 2025-06-04 13:35:33,023 | INFO     |  -- lfn=log.45006595._055807.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:35:55] 2025-06-04 13:35:33,023 | INFO     | stage-out finished correctly
[2025-06-04 09:35:55] 2025-06-04 13:35:33,487 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:35:55] 2025-06-04 13:35:33,583 | INFO     | PID=4067899 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 09:35:55] 2025-06-04 13:35:33,583 | INFO     | .. there are 45 such processes running
[2025-06-04 09:35:55] 2025-06-04 13:35:34,754 | INFO     | monitor loop #226: job 0:6679046404 is in state 'finished'
[2025-06-04 09:35:55] 2025-06-04 13:35:34,754 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:35:55] 2025-06-04 13:35:35,996 | INFO     | job 6679046404 has state=finished
[2025-06-04 09:35:55] 2025-06-04 13:35:35,997 | INFO     | preparing for final server update for job 6679046404 in state='finished'
[2025-06-04 09:35:55] 2025-06-04 13:35:35,997 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:35:55] 2025-06-04 13:35:35,997 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:35:55] 2025-06-04 13:35:35,997 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:35:55] 2025-06-04 13:35:35,997 | INFO     | job 6679046404 has finished - writing final server update
[2025-06-04 09:35:55] 2025-06-04 13:35:35,997 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:35:55] 2025-06-04 13:35:36,016 | INFO     | executing command: lscpu
[2025-06-04 09:35:55] 2025-06-04 13:35:36,105 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:35:55] 2025-06-04 13:35:37,257 | INFO     | monitor loop #227: job 0:6679046404 is in state 'finished'
[2025-06-04 09:35:55] 2025-06-04 13:35:37,258 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:35:55] 2025-06-04 13:35:39,760 | INFO     | monitor loop #228: job 0:6679046404 is in state 'finished'
[2025-06-04 09:35:55] 2025-06-04 13:35:39,761 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:35:55] 2025-06-04 13:35:40,340 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:35:55] 2025-06-04 13:35:40,341 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6679046404/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:35:55] 2025-06-04 13:35:40,341 | INFO     | extracted standard info from prmon json
[2025-06-04 09:35:55] 2025-06-04 13:35:40,341 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:35:55] 2025-06-04 13:35:40,341 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:35:55] 2025-06-04 13:35:40,343 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:35:55] 2025-06-04 13:35:40,343 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:35:55] 2025-06-04 13:35:40,344 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:35:55] 2025-06-04 13:35:40,344 | INFO     | sum of square deviations: 24640462.0
[2025-06-04 09:35:55] 2025-06-04 13:35:40,344 | INFO     | sum of deviations: 3678323545.9999995
[2025-06-04 09:35:55] 2025-06-04 13:35:40,344 | INFO     | mean x: 1749042685.0
[2025-06-04 09:35:55] 2025-06-04 13:35:40,344 | INFO     | mean y: 2285128.6744186045
[2025-06-04 09:35:55] 2025-06-04 13:35:40,344 | INFO     | -- intersect: -261094478852.2347
[2025-06-04 09:35:55] 2025-06-04 13:35:40,345 | INFO     | intersect: -261094478852.2347
[2025-06-04 09:35:55] 2025-06-04 13:35:40,345 | INFO     | chi2: 0.7177327457200461
[2025-06-04 09:35:55] 2025-06-04 13:35:40,345 | INFO     | -- intersect: -261094478852.2347
[2025-06-04 09:35:55] 2025-06-04 13:35:40,345 | INFO     | current memory leak: 149.28 B/s (using 43 data points, chi2=0.72)
[2025-06-04 09:35:55] 2025-06-04 13:35:40,345 | INFO     | ..............................
[2025-06-04 09:35:55] 2025-06-04 13:35:40,345 | INFO     | . Timing measurements:
[2025-06-04 09:35:55] 2025-06-04 13:35:40,345 | INFO     | . get job = 0 s
[2025-06-04 09:35:55] 2025-06-04 13:35:40,345 | INFO     | . initial setup = 2 s
[2025-06-04 09:35:55] 2025-06-04 13:35:40,345 | INFO     | . payload setup = 5 s
[2025-06-04 09:35:55] 2025-06-04 13:35:40,345 | INFO     | . stage-in = 0 s
[2025-06-04 09:35:55] 2025-06-04 13:35:40,345 | INFO     | . payload execution = 3033 s
[2025-06-04 09:35:55] 2025-06-04 13:35:40,345 | INFO     | . stage-out = 0 s
[2025-06-04 09:35:55] 2025-06-04 13:35:40,345 | INFO     | . log creation = 0 s
[2025-06-04 09:35:55] 2025-06-04 13:35:40,345 | INFO     | ..............................
[2025-06-04 09:35:55] 2025-06-04 13:35:40,455 | INFO     | 
[2025-06-04 09:35:55] 2025-06-04 13:35:40,456 | INFO     | job summary report
[2025-06-04 09:35:55] 2025-06-04 13:35:40,456 | INFO     | --------------------------------------------------
[2025-06-04 09:35:55] 2025-06-04 13:35:40,456 | INFO     | PanDA job id: 6679046404
[2025-06-04 09:35:55] 2025-06-04 13:35:40,456 | INFO     | task id: 45006595
[2025-06-04 09:35:55] 2025-06-04 13:35:40,456 | INFO     | errors: (none)
[2025-06-04 09:35:55] 2025-06-04 13:35:40,456 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:35:55] 2025-06-04 13:35:40,456 | INFO     | pilot state: finished 
[2025-06-04 09:35:55] 2025-06-04 13:35:40,456 | INFO     | transexitcode: 0
[2025-06-04 09:35:55] 2025-06-04 13:35:40,456 | INFO     | exeerrorcode: 0
[2025-06-04 09:35:55] 2025-06-04 13:35:40,456 | INFO     | exeerrordiag: 
[2025-06-04 09:35:55] 2025-06-04 13:35:40,456 | INFO     | exitcode: 0
[2025-06-04 09:35:55] 2025-06-04 13:35:40,456 | INFO     | exitmsg: OK
[2025-06-04 09:35:55] 2025-06-04 13:35:40,456 | INFO     | cpuconsumptiontime: 19425 s
[2025-06-04 09:35:55] 2025-06-04 13:35:40,456 | INFO     | nevents: 400
[2025-06-04 09:35:55] 2025-06-04 13:35:40,456 | INFO     | neventsw: 0
[2025-06-04 09:35:55] 2025-06-04 13:35:40,456 | INFO     | pid: 4075322
[2025-06-04 09:35:55] 2025-06-04 13:35:40,457 | INFO     | pgrp: 4075322
[2025-06-04 09:35:55] 2025-06-04 13:35:40,457 | INFO     | corecount: 8
[2025-06-04 09:35:55] 2025-06-04 13:35:40,457 | INFO     | event service: False
[2025-06-04 09:35:55] 2025-06-04 13:35:40,457 | INFO     | sizes: {0: 2397290, 4: 2397496, 11: 2397524, 3043: 2422940, 3044: 2431881, 3045: 2431937, 3051: 2432235}
[2025-06-04 09:35:55] 2025-06-04 13:35:40,457 | INFO     | --------------------------------------------------
[2025-06-04 09:35:55] 2025-06-04 13:35:40,457 | INFO     | 
[2025-06-04 09:35:55] 2025-06-04 13:35:40,457 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 09:35:55] 2025-06-04 13:35:40,477 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:35:55] 2025-06-04 13:35:40,477 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:35:55] 2025-06-04 13:35:40,477 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:35:55] 2025-06-04 13:35:40,477 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:35:55] 2025-06-04 13:35:40,477 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:35:55] 2025-06-04 13:35:40,477 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:35:55] 2025-06-04 13:35:40,477 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:35:55] 2025-06-04 13:35:40,477 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:35:55] 2025-06-04 13:35:40,477 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:35:55] 2025-06-04 13:35:40,477 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:35:55] 2025-06-04 13:35:40,477 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:35:55] 2025-06-04 13:35:40,477 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:35:55] 2025-06-04 13:35:40,478 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:35:55] 2025-06-04 13:35:40,478 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:35:55] 2025-06-04 13:35:40,478 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:35:55] 2025-06-04 13:35:40,478 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:35:55] 2025-06-04 13:35:40,478 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:35:55] 2025-06-04 13:35:40,478 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:35:55] 2025-06-04 13:35:40,478 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:35:55] 2025-06-04 13:35:40,478 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:35:55] 2025-06-04 13:35:40,478 | INFO     | job 6679046404 has completed (purged errors)
[2025-06-04 09:35:55] 2025-06-04 13:35:40,478 | INFO     | overall cleanup function is called
[2025-06-04 09:35:55] 2025-06-04 13:35:41,487 | INFO     | --- collectZombieJob: --- 10, [4075322]
[2025-06-04 09:35:55] 2025-06-04 13:35:41,487 | INFO     | zombie collector waiting for pid 4075322
[2025-06-04 09:35:55] 2025-06-04 13:35:41,488 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:35:55] 2025-06-04 13:35:41,488 | INFO     | collected zombie processes
[2025-06-04 09:35:55] 2025-06-04 13:35:41,488 | INFO     | will attempt to kill all subprocesses of pid=4075322
[2025-06-04 09:35:55] 2025-06-04 13:35:41,906 | INFO     | process IDs to be killed: [4075322] (in reverse order)
[2025-06-04 09:35:55] 2025-06-04 13:35:42,068 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:35:55] 2025-06-04 13:35:42,068 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:35:55] 2025-06-04 13:35:42,092 | INFO     | did not find any defunct processes belonging to 4075322
[2025-06-04 09:35:55] 2025-06-04 13:35:42,116 | INFO     | did not find any defunct processes belonging to 4075322
[2025-06-04 09:35:55] 2025-06-04 13:35:42,116 | INFO     | ready for new job
[2025-06-04 09:35:55] 2025-06-04 13:35:42,116 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:35:55] 2025-06-04 13:35:42,117 | INFO     | **************************************
[2025-06-04 09:35:55] 2025-06-04 13:35:42,117 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:35:55] 2025-06-04 13:35:42,117 | INFO     | **************************************
[2025-06-04 09:35:55] 2025-06-04 13:35:42,117 | INFO     | 
[2025-06-04 09:35:55] 2025-06-04 13:35:42,135 | INFO     | architecture information:
[2025-06-04 09:35:55] 2025-06-04 13:35:42,135 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:35:55] 2025-06-04 13:35:42,155 | INFO     | cat /etc/os-release:
[2025-06-04 09:35:55] NAME="CentOS Linux"
[2025-06-04 09:35:55] VERSION="7 (Core)"
[2025-06-04 09:35:55] ID="centos"
[2025-06-04 09:35:55] ID_LIKE="rhel fedora"
[2025-06-04 09:35:55] VERSION_ID="7"
[2025-06-04 09:35:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:35:55] ANSI_COLOR="0;31"
[2025-06-04 09:35:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:35:55] HOME_URL="https://www.centos.org/"
[2025-06-04 09:35:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:35:55] 
[2025-06-04 09:35:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:35:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:35:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:35:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:35:55] 
[2025-06-04 09:35:55] 2025-06-04 13:35:42,155 | INFO     | **************************************
[2025-06-04 09:35:55] 2025-06-04 13:35:42,658 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 09:35:55] 2025-06-04 13:35:42,674 | INFO     | sufficient remaining disk space (172079710208 B)
[2025-06-04 09:35:55] 2025-06-04 13:35:42,674 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:35:55] 2025-06-04 13:35:42,674 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:35:55] 2025-06-04 13:35:42,674 | INFO     | update_server=False
[2025-06-04 09:35:55] 2025-06-04 13:35:42,674 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:35:55] 2025-06-04 13:35:42,921 | INFO     | all job control threads have been joined
[2025-06-04 09:35:55] 2025-06-04 13:35:42,975 | INFO     | all data control threads have been joined
[2025-06-04 09:35:55] 2025-06-04 13:35:43,243 | INFO     | all payload control threads have been joined
[2025-06-04 09:35:55] 2025-06-04 13:35:43,268 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:35:55] 2025-06-04 13:35:43,269 | INFO     | aborting loop
[2025-06-04 09:35:55] 2025-06-04 13:35:43,589 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:35:55] 2025-06-04 13:35:43,612 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:35:55] 2025-06-04 13:35:43,612 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:35:55] 2025-06-04 13:35:43,612 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:35:55] 2025-06-04 13:35:43,680 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:35:55] 2025-06-04 13:35:43,720 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:35:55] 2025-06-04 13:35:43,927 | INFO     | [job] control thread has finished
[2025-06-04 09:35:55] 2025-06-04 13:35:43,958 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:35:55] 2025-06-04 13:35:43,981 | INFO     | [data] control thread has finished
[2025-06-04 09:35:55] 2025-06-04 13:35:44,035 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:35:55] 2025-06-04 13:35:44,054 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:35:55] 2025-06-04 13:35:44,067 | INFO     | [job] validate thread has finished
[2025-06-04 09:35:55] 2025-06-04 13:35:44,080 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:35:55] 2025-06-04 13:35:44,249 | INFO     | [payload] control thread has finished
[2025-06-04 09:35:55] 2025-06-04 13:35:44,274 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:35:55] 2025-06-04 13:35:44,784 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:35:55] 2025-06-04 13:35:45,169 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:35:55] 2025-06-04 13:35:45,170 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:35:55] 2025-06-04 13:35:45,410 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:35:55] 2025-06-04 13:35:45,593 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:35:55] 2025-06-04 13:35:46,416 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:35:55] 2025-06-04 13:35:48,060 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:35:55] 2025-06-04 13:35:49,822 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139630615263040)>', '<ExcThread(monitor, started 139629848160000)>']
[2025-06-04 09:35:55] 2025-06-04 13:35:50,644 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:35:55] 2025-06-04 13:35:50,644 | INFO     | [monitor] control thread has ended
[2025-06-04 09:35:55] 2025-06-04 13:35:54,847 | INFO     | all workflow threads have been joined
[2025-06-04 09:35:55] 2025-06-04 13:35:54,847 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:35:55] 2025-06-04 13:35:54,848 | INFO     | traces error code: 0
[2025-06-04 09:35:55] 2025-06-04 13:35:54,848 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:35:55] 2025-06-04 13:35:55,055 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:35:55] 2025-06-04 13:35:55,057 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:35:55] 2025-06-04 13:35:55,059 [wrapper] pilotpid: 4067899
[2025-06-04 09:35:55] 2025-06-04 13:35:55,062 [wrapper] Pilot exit status: 0
[2025-06-04 09:35:55] 2025-06-04 13:35:55,076 [wrapper] pandaids: 6679046404
[2025-06-04 09:35:55] 2025-06-04 13:35:55,169 [wrapper] cleanup supervisor_pilot  521571 4067900
[2025-06-04 09:35:55] 2025-06-04 13:35:55,171 [wrapper] Test setup, not cleaning
[2025-06-04 09:35:55] 2025-06-04 13:35:55,173 [wrapper] apfmon messages muted
[2025-06-04 09:35:55] 2025-06-04 13:35:55,175 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:35:55] 2025-06-04 13:35:55,177 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:35:55]  *** Error codes and diagnostics ***
[2025-06-04 09:35:55]     "exeErrorCode": 0,
[2025-06-04 09:35:55]     "exeErrorDiag": "",
[2025-06-04 09:35:55]     "pilotErrorCode": 0,
[2025-06-04 09:35:55]     "pilotErrorDiag": "",
[2025-06-04 09:35:55]  *** Listing of results directory ***
[2025-06-04 09:35:55] total 388556
[2025-06-04 09:35:55] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:31 pilot3.tar.gz
[2025-06-04 09:35:55] -rwx------. 1 boincer umatlas     37140 Jun  4 04:45 runpilot2-wrapper.sh
[2025-06-04 09:35:55] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:45 queuedata.json
[2025-06-04 09:35:55] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:35:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:44 run_atlas
[2025-06-04 09:35:55] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:44 job.xml
[2025-06-04 09:35:55] -rw-r--r--. 2 boincer umatlas 214599743 Jun  4 08:44 EVNT.45006593._000930.pool.root.1
[2025-06-04 09:35:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:44 start_atlas.sh
[2025-06-04 09:35:55] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:44 shared
[2025-06-04 09:35:55] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 08:44 input.tar.gz
[2025-06-04 09:35:55] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:44 boinc_lockfile
[2025-06-04 09:35:55] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 08:44 pandaJob.out
[2025-06-04 09:35:55] -rw-------. 1 boincer umatlas    986811 Jun  4 08:44 agis_schedconf.cvmfs.json
[2025-06-04 09:35:55] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:44 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:35:55] drwx------. 4 boincer umatlas      4096 Jun  4 08:44 pilot3
[2025-06-04 09:35:55] -rw-r--r--. 1 boincer umatlas      7160 Jun  4 09:31 init_data.xml
[2025-06-04 09:35:55] -rw-------. 1 boincer umatlas 178239549 Jun  4 09:35 HITS.45006595._055807.pool.root.1
[2025-06-04 09:35:55] -rw-r--r--. 1 boincer umatlas       529 Jun  4 09:35 boinc_task_state.xml
[2025-06-04 09:35:55] -rw-------. 1 boincer umatlas      1045 Jun  4 09:35 memory_monitor_summary.json
[2025-06-04 09:35:55] -rw-------. 1 boincer umatlas    287809 Jun  4 09:35 log.45006595._055807.job.log.tgz.1
[2025-06-04 09:35:55] -rw-------. 1 boincer umatlas        95 Jun  4 09:35 pilot_heartbeat.json
[2025-06-04 09:35:55] -rw-------. 1 boincer umatlas      7712 Jun  4 09:35 heartbeat.json
[2025-06-04 09:35:55] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:35 boinc_mmap_file
[2025-06-04 09:35:55] -rw-r--r--. 1 boincer umatlas        27 Jun  4 09:35 wrapper_checkpoint.txt
[2025-06-04 09:35:55] -rw-------. 1 boincer umatlas      4354 Jun  4 09:35 pilotlog.txt
[2025-06-04 09:35:55] -rw-------. 1 boincer umatlas    317379 Jun  4 09:35 log.45006595._055807.job.log.1
[2025-06-04 09:35:55] -rw-------. 1 boincer umatlas       357 Jun  4 09:35 output.list
[2025-06-04 09:35:55] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:35 runtime_log
[2025-06-04 09:35:55] -rw-------. 1 boincer umatlas    624640 Jun  4 09:35 result.tar.gz
[2025-06-04 09:35:55] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 09:35 runtime_log.err
[2025-06-04 09:35:55] -rw-------. 1 boincer umatlas       654 Jun  4 09:35 eajLDmbvyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmronKDmDAT2Vo.diag
[2025-06-04 09:35:55] -rw-r--r--. 1 boincer umatlas     21451 Jun  4 09:35 stderr.txt
[2025-06-04 09:35:55] HITS file was successfully produced:
[2025-06-04 09:35:55] -rw-------. 1 boincer umatlas 178239549 Jun  4 09:35 shared/HITS.pool.root.1
[2025-06-04 09:35:55]  *** Contents of shared directory: ***
[2025-06-04 09:35:55] total 384768
[2025-06-04 09:35:55] -rw-r--r--. 2 boincer umatlas 214599743 Jun  4 08:44 ATLAS.root_0
[2025-06-04 09:35:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:44 start_atlas.sh
[2025-06-04 09:35:55] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 08:44 input.tar.gz
[2025-06-04 09:35:55] -rw-------. 1 boincer umatlas 178239549 Jun  4 09:35 HITS.pool.root.1
[2025-06-04 09:35:55] -rw-------. 1 boincer umatlas    624640 Jun  4 09:35 result.tar.gz
09:35:57 (4062112): run_atlas exited; CPU time 19482.993244
09:35:57 (4062112): called boinc_finish(0)

</stderr_txt>
]]>

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