Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:38:26 (379346): wrapper (7.7.26015): starting
09:38:26 (379346): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:38:26] Arguments: --nthreads 8
[2025-06-04 09:38:26] Threads: 8
[2025-06-04 09:38:26] Checking for CVMFS
[2025-06-04 09:38:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:38:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:38:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:38:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:38:26] 2.12.6.0 1636016 23558 456572 146781 0 201 26817964 32935936 16221 16776704 1 130981629 99.630 116906903 26392 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 09:38:26] CVMFS is ok
[2025-06-04 09:38:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:38:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:38:27] Further information can be found at the LHC@home message board.
[2025-06-04 09:38:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:38:27] Checking for apptainer binary...
[2025-06-04 09:38:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:38:27] Running /usr/bin/apptainer --version
[2025-06-04 09:38:27] apptainer version 1.4.1-1.el9
[2025-06-04 09:38:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:38:27] c6-2-11-4.aglt2.org
[2025-06-04 09:38:27] apptainer works
[2025-06-04 09:38:27] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:38:27] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:38:27] Starting ATLAS job with PandaID=6679342318
[2025-06-04 09:38:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:52:07]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:52:07]  filetype=log
[2025-06-04 10:52:07]  guid=a3c91ee5-7ad8-4b00-a923-51d2a12d0603
[2025-06-04 10:52:07]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 10:52:07]  is_altstaged=None
[2025-06-04 10:52:07]  is_tar=False
[2025-06-04 10:52:07]  lfn=log.45006595._056184.job.log.tgz.1
[2025-06-04 10:52:07]  mtime=0
[2025-06-04 10:52:07]  protocol_id=None
[2025-06-04 10:52:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:52:07]  replicas=None
[2025-06-04 10:52:07]  scope=mc23_13p6TeV
[2025-06-04 10:52:07]  status=None
[2025-06-04 10:52:07]  status_code=0
[2025-06-04 10:52:07]  storage_token=
[2025-06-04 10:52:07]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6679342318/log.45006595._056184.job.log.tgz.1
[2025-06-04 10:52:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/98/6d/log.45006595._056184.job.log.tgz.1
[2025-06-04 10:52:07]  workdir=None
[2025-06-04 10:52:07] ]
[2025-06-04 10:52:07] 2025-06-04 14:51:44,230 | INFO     | transferring file log.45006595._056184.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6679342318/log.45006595._056184.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:52:07] 2025-06-04 14:51:44,230 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6679342318/log.45006595._056184.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._056184.job
[2025-06-04 10:52:07] 2025-06-04 14:51:44,248 | INFO     | adding to output.list: log.45006595._056184.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/98/6d/log.45006595._056184.job.log.tg
[2025-06-04 10:52:07] 2025-06-04 14:51:44,249 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:52:07] 2025-06-04 14:51:44,249 | INFO     | summary of transferred files:
[2025-06-04 10:52:07] 2025-06-04 14:51:44,249 | INFO     |  -- lfn=log.45006595._056184.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:52:07] 2025-06-04 14:51:44,249 | INFO     | stage-out finished correctly
[2025-06-04 10:52:07] 2025-06-04 14:51:44,353 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:52:07] 2025-06-04 14:51:44,443 | INFO     | job 6679342318 has state=finished
[2025-06-04 10:52:07] 2025-06-04 14:51:44,443 | INFO     | preparing for final server update for job 6679342318 in state='finished'
[2025-06-04 10:52:07] 2025-06-04 14:51:44,498 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 10:52:07] 2025-06-04 14:51:44,498 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:52:07] 2025-06-04 14:51:44,498 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:52:07] 2025-06-04 14:51:44,498 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:52:07] 2025-06-04 14:51:44,498 | INFO     | job 6679342318 has finished - writing final server update
[2025-06-04 10:52:07] 2025-06-04 14:51:44,499 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:52:07] 2025-06-04 14:51:44,516 | INFO     | executing command: lscpu
[2025-06-04 10:52:07] 2025-06-04 14:51:44,604 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:52:07] 2025-06-04 14:51:45,663 | INFO     | monitor loop #323: job 0:6679342318 is in state 'finished'
[2025-06-04 10:52:07] 2025-06-04 14:51:45,663 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:52:07] 2025-06-04 14:51:47,643 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 10:52:07] 2025-06-04 14:51:47,643 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6679342318/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:52:07] 2025-06-04 14:51:47,644 | INFO     | extracted standard info from prmon json
[2025-06-04 10:52:07] 2025-06-04 14:51:47,644 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:52:07] 2025-06-04 14:51:47,644 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:52:07] 2025-06-04 14:51:47,645 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:52:07] 2025-06-04 14:51:47,645 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:52:07] 2025-06-04 14:51:47,646 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:52:07] 2025-06-04 14:51:47,646 | INFO     | sum of square deviations: 85136480.0
[2025-06-04 10:52:07] 2025-06-04 14:51:47,647 | INFO     | sum of deviations: 7142707160.000001
[2025-06-04 10:52:07] 2025-06-04 14:51:47,647 | INFO     | mean x: 1749046596.0
[2025-06-04 10:52:07] 2025-06-04 14:51:47,647 | INFO     | mean y: 2228863.6461538463
[2025-06-04 10:52:07] 2025-06-04 14:51:47,647 | INFO     | -- intersect: -146737777822.35767
[2025-06-04 10:52:07] 2025-06-04 14:51:47,647 | INFO     | intersect: -146737777822.35767
[2025-06-04 10:52:07] 2025-06-04 14:51:47,647 | INFO     | chi2: 1.0595449696027115
[2025-06-04 10:52:07] 2025-06-04 14:51:47,647 | INFO     | -- intersect: -146737777822.35767
[2025-06-04 10:52:07] 2025-06-04 14:51:47,647 | INFO     | current memory leak: 83.90 B/s (using 65 data points, chi2=1.06)
[2025-06-04 10:52:07] 2025-06-04 14:51:47,648 | INFO     | ..............................
[2025-06-04 10:52:07] 2025-06-04 14:51:47,648 | INFO     | . Timing measurements:
[2025-06-04 10:52:07] 2025-06-04 14:51:47,648 | INFO     | . get job = 0 s
[2025-06-04 10:52:07] 2025-06-04 14:51:47,648 | INFO     | . initial setup = 2 s
[2025-06-04 10:52:07] 2025-06-04 14:51:47,648 | INFO     | . payload setup = 5 s
[2025-06-04 10:52:07] 2025-06-04 14:51:47,648 | INFO     | . stage-in = 0 s
[2025-06-04 10:52:07] 2025-06-04 14:51:47,648 | INFO     | . payload execution = 4363 s
[2025-06-04 10:52:07] 2025-06-04 14:51:47,648 | INFO     | . stage-out = 0 s
[2025-06-04 10:52:07] 2025-06-04 14:51:47,648 | INFO     | . log creation = 0 s
[2025-06-04 10:52:07] 2025-06-04 14:51:47,648 | INFO     | ..............................
[2025-06-04 10:52:07] 2025-06-04 14:51:47,734 | INFO     | 
[2025-06-04 10:52:07] 2025-06-04 14:51:47,734 | INFO     | job summary report
[2025-06-04 10:52:07] 2025-06-04 14:51:47,734 | INFO     | --------------------------------------------------
[2025-06-04 10:52:07] 2025-06-04 14:51:47,734 | INFO     | PanDA job id: 6679342318
[2025-06-04 10:52:07] 2025-06-04 14:51:47,734 | INFO     | task id: 45006595
[2025-06-04 10:52:07] 2025-06-04 14:51:47,734 | INFO     | errors: (none)
[2025-06-04 10:52:07] 2025-06-04 14:51:47,734 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:52:07] 2025-06-04 14:51:47,734 | INFO     | pilot state: finished 
[2025-06-04 10:52:07] 2025-06-04 14:51:47,734 | INFO     | transexitcode: 0
[2025-06-04 10:52:07] 2025-06-04 14:51:47,734 | INFO     | exeerrorcode: 0
[2025-06-04 10:52:07] 2025-06-04 14:51:47,734 | INFO     | exeerrordiag: 
[2025-06-04 10:52:07] 2025-06-04 14:51:47,734 | INFO     | exitcode: 0
[2025-06-04 10:52:07] 2025-06-04 14:51:47,734 | INFO     | exitmsg: OK
[2025-06-04 10:52:07] 2025-06-04 14:51:47,735 | INFO     | cpuconsumptiontime: 29382 s
[2025-06-04 10:52:07] 2025-06-04 14:51:47,735 | INFO     | nevents: 400
[2025-06-04 10:52:07] 2025-06-04 14:51:47,735 | INFO     | neventsw: 0
[2025-06-04 10:52:07] 2025-06-04 14:51:47,735 | INFO     | pid: 392395
[2025-06-04 10:52:07] 2025-06-04 14:51:47,735 | INFO     | pgrp: 392395
[2025-06-04 10:52:07] 2025-06-04 14:51:47,735 | INFO     | corecount: 8
[2025-06-04 10:52:07] 2025-06-04 14:51:47,735 | INFO     | event service: False
[2025-06-04 10:52:07] 2025-06-04 14:51:47,735 | INFO     | sizes: {0: 2397172, 1: 2397314, 4: 2397520, 11: 2397548, 4373: 2423548, 4374: 2432489, 4375: 2432673, 4378: 2432843}
[2025-06-04 10:52:07] 2025-06-04 14:51:47,735 | INFO     | --------------------------------------------------
[2025-06-04 10:52:07] 2025-06-04 14:51:47,735 | INFO     | 
[2025-06-04 10:52:07] 2025-06-04 14:51:47,735 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 10:52:07] 2025-06-04 14:51:47,750 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:52:07] 2025-06-04 14:51:47,751 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:52:07] 2025-06-04 14:51:47,751 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:52:07] 2025-06-04 14:51:47,751 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:52:07] 2025-06-04 14:51:47,751 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:52:07] 2025-06-04 14:51:47,751 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:52:07] 2025-06-04 14:51:47,751 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:52:07] 2025-06-04 14:51:47,751 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:52:07] 2025-06-04 14:51:47,751 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:52:07] 2025-06-04 14:51:47,751 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:52:07] 2025-06-04 14:51:47,751 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:52:07] 2025-06-04 14:51:47,751 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:52:07] 2025-06-04 14:51:47,751 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:52:07] 2025-06-04 14:51:47,751 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:52:07] 2025-06-04 14:51:47,751 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:52:07] 2025-06-04 14:51:47,752 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:52:07] 2025-06-04 14:51:47,752 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:52:07] 2025-06-04 14:51:47,752 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:52:07] 2025-06-04 14:51:47,752 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:52:07] 2025-06-04 14:51:47,752 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:52:07] 2025-06-04 14:51:47,752 | INFO     | job 6679342318 has completed (purged errors)
[2025-06-04 10:52:07] 2025-06-04 14:51:47,752 | INFO     | overall cleanup function is called
[2025-06-04 10:52:07] 2025-06-04 14:51:48,759 | INFO     | --- collectZombieJob: --- 10, [392395]
[2025-06-04 10:52:07] 2025-06-04 14:51:48,759 | INFO     | zombie collector waiting for pid 392395
[2025-06-04 10:52:07] 2025-06-04 14:51:48,759 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:52:07] 2025-06-04 14:51:48,759 | INFO     | collected zombie processes
[2025-06-04 10:52:07] 2025-06-04 14:51:48,759 | INFO     | will attempt to kill all subprocesses of pid=392395
[2025-06-04 10:52:07] 2025-06-04 14:51:49,079 | INFO     | process IDs to be killed: [392395] (in reverse order)
[2025-06-04 10:52:07] 2025-06-04 14:51:49,174 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:52:07] 2025-06-04 14:51:49,174 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:52:07] 2025-06-04 14:51:49,187 | INFO     | did not find any defunct processes belonging to 392395
[2025-06-04 10:52:07] 2025-06-04 14:51:49,201 | INFO     | did not find any defunct processes belonging to 392395
[2025-06-04 10:52:07] 2025-06-04 14:51:49,201 | INFO     | ready for new job
[2025-06-04 10:52:07] 2025-06-04 14:51:49,201 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:52:07] 2025-06-04 14:51:49,203 | INFO     | **************************************
[2025-06-04 10:52:07] 2025-06-04 14:51:49,203 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:52:07] 2025-06-04 14:51:49,203 | INFO     | **************************************
[2025-06-04 10:52:07] 2025-06-04 14:51:49,203 | INFO     | 
[2025-06-04 10:52:07] 2025-06-04 14:51:49,220 | INFO     | architecture information:
[2025-06-04 10:52:07] 2025-06-04 14:51:49,220 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:52:07] 2025-06-04 14:51:49,235 | INFO     | cat /etc/os-release:
[2025-06-04 10:52:07] NAME="CentOS Linux"
[2025-06-04 10:52:07] VERSION="7 (Core)"
[2025-06-04 10:52:07] ID="centos"
[2025-06-04 10:52:07] ID_LIKE="rhel fedora"
[2025-06-04 10:52:07] VERSION_ID="7"
[2025-06-04 10:52:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:52:07] ANSI_COLOR="0;31"
[2025-06-04 10:52:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:52:07] HOME_URL="https://www.centos.org/"
[2025-06-04 10:52:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:52:07] 
[2025-06-04 10:52:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:52:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:52:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:52:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:52:07] 
[2025-06-04 10:52:07] 2025-06-04 14:51:49,235 | INFO     | **************************************
[2025-06-04 10:52:07] 2025-06-04 14:51:49,738 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 10:52:07] 2025-06-04 14:51:49,758 | INFO     | sufficient remaining disk space (95455019008 B)
[2025-06-04 10:52:07] 2025-06-04 14:51:49,759 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:52:07] 2025-06-04 14:51:49,759 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:52:07] 2025-06-04 14:51:49,759 | INFO     | update_server=False
[2025-06-04 10:52:07] 2025-06-04 14:51:49,760 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:52:07] 2025-06-04 14:51:49,760 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:52:07] 2025-06-04 14:51:49,761 | INFO     | aborting loop
[2025-06-04 10:52:07] 2025-06-04 14:51:49,839 | INFO     | all data control threads have been joined
[2025-06-04 10:52:07] 2025-06-04 14:51:49,842 | INFO     | all payload control threads have been joined
[2025-06-04 10:52:07] 2025-06-04 14:51:49,860 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:52:07] 2025-06-04 14:51:50,319 | INFO     | PID=383464 has CPU usage=15.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 10:52:07] 2025-06-04 14:51:50,319 | INFO     | .. there are 21 such processes running
[2025-06-04 10:52:07] 2025-06-04 14:51:50,320 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:52:07] 2025-06-04 14:51:50,320 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:52:07] 2025-06-04 14:51:50,320 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:52:07] 2025-06-04 14:51:50,449 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:52:07] 2025-06-04 14:51:50,765 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:52:07] 2025-06-04 14:51:50,766 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:52:07] 2025-06-04 14:51:50,845 | INFO     | [data] control thread has finished
[2025-06-04 10:52:07] 2025-06-04 14:51:50,847 | INFO     | [payload] control thread has finished
[2025-06-04 10:52:07] 2025-06-04 14:51:51,260 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:52:07] 2025-06-04 14:51:51,353 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:52:07] 2025-06-04 14:51:51,424 | INFO     | all job control threads have been joined
[2025-06-04 10:52:07] 2025-06-04 14:51:51,447 | INFO     | [job] validate thread has finished
[2025-06-04 10:52:07] 2025-06-04 14:51:51,794 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:52:07] 2025-06-04 14:51:51,865 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:52:07] 2025-06-04 14:51:51,897 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:52:07] 2025-06-04 14:51:51,903 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:52:07] 2025-06-04 14:51:52,069 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:52:07] 2025-06-04 14:51:52,430 | INFO     | [job] control thread has finished
[2025-06-04 10:52:07] 2025-06-04 14:51:52,737 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:52:07] 2025-06-04 14:51:53,742 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:52:07] 2025-06-04 14:51:54,455 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:52:07] 2025-06-04 14:52:00,071 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:52:07] 2025-06-04 14:52:01,076 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:52:07] 2025-06-04 14:52:02,493 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140171769771840)>', '<ExcThread(monitor, started 140171139864320)>']
[2025-06-04 10:52:07] 2025-06-04 14:52:03,380 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:52:07] 2025-06-04 14:52:03,380 | INFO     | [monitor] control thread has ended
[2025-06-04 10:52:07] 2025-06-04 14:52:07,518 | INFO     | all workflow threads have been joined
[2025-06-04 10:52:07] 2025-06-04 14:52:07,518 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:52:07] 2025-06-04 14:52:07,518 | INFO     | traces error code: 0
[2025-06-04 10:52:07] 2025-06-04 14:52:07,518 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:52:07] 2025-06-04 14:52:07,669 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:52:07] 2025-06-04 14:52:07,672 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:52:07] 2025-06-04 14:52:07,674 [wrapper] pilotpid: 383464
[2025-06-04 10:52:07] 2025-06-04 14:52:07,676 [wrapper] Pilot exit status: 0
[2025-06-04 10:52:07] 2025-06-04 14:52:07,686 [wrapper] pandaids: 6679342318
[2025-06-04 10:52:07] 2025-06-04 14:52:07,732 [wrapper] cleanup supervisor_pilot  599929 383465
[2025-06-04 10:52:07] 2025-06-04 14:52:07,734 [wrapper] Test setup, not cleaning
[2025-06-04 10:52:07] 2025-06-04 14:52:07,736 [wrapper] apfmon messages muted
[2025-06-04 10:52:07] 2025-06-04 14:52:07,737 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:52:07] 2025-06-04 14:52:07,739 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:52:07]  *** Error codes and diagnostics ***
[2025-06-04 10:52:07]     "exeErrorCode": 0,
[2025-06-04 10:52:07]     "exeErrorDiag": "",
[2025-06-04 10:52:07]     "pilotErrorCode": 0,
[2025-06-04 10:52:07]     "pilotErrorDiag": "",
[2025-06-04 10:52:07]  *** Listing of results directory ***
[2025-06-04 10:52:07] total 385620
[2025-06-04 10:52:07] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 10:52:07] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:58 queuedata.json
[2025-06-04 10:52:07] -rwx------. 1 boincer umatlas     37140 Jun  4 04:58 runpilot2-wrapper.sh
[2025-06-04 10:52:07] -rw-r--r--. 1 boincer umatlas       100 Jun  4 09:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:52:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 09:38 run_atlas
[2025-06-04 10:52:07] -rw-r--r--. 1 boincer umatlas       105 Jun  4 09:38 job.xml
[2025-06-04 10:52:07] -rw-r--r--. 2 boincer umatlas 214207953 Jun  4 09:38 EVNT.45006593._001599.pool.root.1
[2025-06-04 10:52:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:38 start_atlas.sh
[2025-06-04 10:52:07] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 09:38 shared
[2025-06-04 10:52:07] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 09:38 input.tar.gz
[2025-06-04 10:52:07] -rw-r--r--. 1 boincer umatlas         0 Jun  4 09:38 boinc_lockfile
[2025-06-04 10:52:07] -rw-r--r--. 1 boincer umatlas      2522 Jun  4 09:38 pandaJob.out
[2025-06-04 10:52:07] -rw-------. 1 boincer umatlas    986819 Jun  4 09:38 agis_schedconf.cvmfs.json
[2025-06-04 10:52:07] -rw-------. 1 boincer umatlas   1598969 Jun  4 09:38 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:52:07] drwx------. 4 boincer umatlas      4096 Jun  4 09:38 pilot3
[2025-06-04 10:52:07] -rw-r--r--. 1 boincer umatlas      6857 Jun  4 10:46 init_data.xml
[2025-06-04 10:52:07] -rw-------. 1 boincer umatlas 175396708 Jun  4 10:51 HITS.45006595._056184.pool.root.1
[2025-06-04 10:52:07] -rw-r--r--. 1 boincer umatlas       529 Jun  4 10:51 boinc_task_state.xml
[2025-06-04 10:52:07] -rw-------. 1 boincer umatlas        95 Jun  4 10:51 pilot_heartbeat.json
[2025-06-04 10:52:07] -rw-------. 1 boincer umatlas      1038 Jun  4 10:51 memory_monitor_summary.json
[2025-06-04 10:52:07] -rw-------. 1 boincer umatlas    287085 Jun  4 10:51 log.45006595._056184.job.log.tgz.1
[2025-06-04 10:52:07] -rw-------. 1 boincer umatlas      7717 Jun  4 10:51 heartbeat.json
[2025-06-04 10:52:07] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 10:51 boinc_mmap_file
[2025-06-04 10:52:07] -rw-r--r--. 1 boincer umatlas        27 Jun  4 10:51 wrapper_checkpoint.txt
[2025-06-04 10:52:07] -rw-------. 1 boincer umatlas      4820 Jun  4 10:52 pilotlog.txt
[2025-06-04 10:52:07] -rw-------. 1 boincer umatlas    432360 Jun  4 10:52 log.45006595._056184.job.log.1
[2025-06-04 10:52:07] -rw-------. 1 boincer umatlas       357 Jun  4 10:52 output.list
[2025-06-04 10:52:07] -rw-r--r--. 1 boincer umatlas       620 Jun  4 10:52 runtime_log
[2025-06-04 10:52:07] -rw-------. 1 boincer umatlas    737280 Jun  4 10:52 result.tar.gz
[2025-06-04 10:52:07] -rw-r--r--. 1 boincer umatlas      8664 Jun  4 10:52 runtime_log.err
[2025-06-04 10:52:07] -rw-------. 1 boincer umatlas       652 Jun  4 10:52 hjJNDm17yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmntnKDmWSYWhn.diag
[2025-06-04 10:52:07] -rw-r--r--. 1 boincer umatlas     21255 Jun  4 10:52 stderr.txt
[2025-06-04 10:52:07] HITS file was successfully produced:
[2025-06-04 10:52:07] -rw-------. 1 boincer umatlas 175396708 Jun  4 10:51 shared/HITS.pool.root.1
[2025-06-04 10:52:07]  *** Contents of shared directory: ***
[2025-06-04 10:52:07] total 381720
[2025-06-04 10:52:07] -rw-r--r--. 2 boincer umatlas 214207953 Jun  4 09:38 ATLAS.root_0
[2025-06-04 10:52:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:38 start_atlas.sh
[2025-06-04 10:52:07] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 09:38 input.tar.gz
[2025-06-04 10:52:07] -rw-------. 1 boincer umatlas 175396708 Jun  4 10:51 HITS.pool.root.1
[2025-06-04 10:52:07] -rw-------. 1 boincer umatlas    737280 Jun  4 10:52 result.tar.gz
10:52:09 (379346): run_atlas exited; CPU time 29553.239854
10:52:09 (379346): called boinc_finish(0)

</stderr_txt>
]]>

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