Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:48:54 (20802): wrapper (7.7.26015): starting
21:48:54 (20802): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 21:48:54] Arguments: --nthreads 8
[2025-06-04 21:48:54] Threads: 8
[2025-06-04 21:48:54] Checking for CVMFS
[2025-06-04 21:48:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 21:48:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 21:48:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 21:48:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 21:48:57] 2.11.2.0 25755 33830 100300 146792 1 59 19589841 25165825 3529 130560 0 18978792 99.800 18625586 2377 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 21:48:57] CVMFS is ok
[2025-06-04 21:48:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 21:48:57] Checking for apptainer binary...
[2025-06-04 21:48:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 21:48:57] Running /usr/bin/apptainer --version
[2025-06-04 21:48:57] apptainer version 1.3.2-1.el7
[2025-06-04 21:48:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 21:49:06] cg-vwn458.simple-grid.lan
[2025-06-04 21:49:06] apptainer works
[2025-06-04 21:49:06] Set ATHENA_PROC_NUMBER=8
[2025-06-04 21:49:06] Set ATHENA_CORE_NUMBER=8
[2025-06-04 21:49:07] Starting ATLAS job with PandaID=6679000485
[2025-06-04 21:49:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:40:37]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:40:37] 2025-06-04 23:23:02,219 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:40:37] 2025-06-04 23:23:02,219 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:40:37] 2025-06-04 23:23:02,219 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:40:37] 2025-06-04 23:23:02,219 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:40:37] 2025-06-04 23:23:02,224 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:40:37] 2025-06-04 23:23:02,224 | INFO     | sum of square deviations: 2370641658.0
[2025-06-05 01:40:37] 2025-06-04 23:23:02,226 | INFO     | sum of deviations: 61569646731.0
[2025-06-05 01:40:37] 2025-06-04 23:23:02,226 | INFO     | mean x: 1749073236.0
[2025-06-05 01:40:37] 2025-06-04 23:23:02,226 | INFO     | mean y: 2416353.3705583755
[2025-06-05 01:40:37] 2025-06-04 23:23:02,226 | INFO     | -- intersect: -45424027952.85997
[2025-06-05 01:40:37] 2025-06-04 23:23:02,226 | INFO     | intersect: -45424027952.85997
[2025-06-05 01:40:37] 2025-06-04 23:23:02,227 | INFO     | chi2: 5.723385255923555
[2025-06-05 01:40:37] 2025-06-04 23:23:02,230 | INFO     | sum of square deviations: 2194675568.0
[2025-06-05 01:40:37] 2025-06-04 23:23:02,232 | INFO     | sum of deviations: 73448757664.5
[2025-06-05 01:40:37] 2025-06-04 23:23:02,232 | INFO     | mean x: 1749073083.5
[2025-06-05 01:40:37] 2025-06-04 23:23:02,232 | INFO     | mean y: 2426403.8072916665
[2025-06-05 01:40:37] 2025-06-04 23:23:02,232 | INFO     | -- intersect: -58533444191.664375
[2025-06-05 01:40:37] 2025-06-04 23:23:02,232 | INFO     | intersect: -58533444191.664375
[2025-06-05 01:40:37] 2025-06-04 23:23:02,233 | INFO     | chi2: 4.917584216717808
[2025-06-05 01:40:37] 2025-06-04 23:23:02,233 | INFO     | current chi2=4.917584216717808 (change=14.079098351308147 %)
[2025-06-05 01:40:37] 2025-06-04 23:23:02,233 | INFO     | right removable region: 191
[2025-06-05 01:40:37] 2025-06-04 23:23:02,233 | INFO     | sum of square deviations: 2194675568.0
[2025-06-05 01:40:37] 2025-06-04 23:23:02,234 | INFO     | sum of deviations: -3047235663.0
[2025-06-05 01:40:37] 2025-06-04 23:23:02,235 | INFO     | mean x: 1749073388.5
[2025-06-05 01:40:37] 2025-06-04 23:23:02,235 | INFO     | mean y: 2472252.46875
[2025-06-05 01:40:37] 2025-06-04 23:23:02,235 | INFO     | -- intersect: 2431003778.656248
[2025-06-05 01:40:37] 2025-06-04 23:23:02,235 | INFO     | intersect: 2431003778.656248
[2025-06-05 01:40:37] 2025-06-04 23:23:02,235 | INFO     | chi2: 1.3412318000611412
[2025-06-05 01:40:37] 2025-06-04 23:23:02,235 | INFO     | current chi2=1.3412318000611412 (change=76.56576064536279 %)
[2025-06-05 01:40:37] 2025-06-04 23:23:02,236 | INFO     | sum of square deviations: 2027639878.0
[2025-06-05 01:40:37] 2025-06-04 23:23:02,237 | INFO     | sum of deviations: -17316263004.0
[2025-06-05 01:40:37] 2025-06-04 23:23:02,237 | INFO     | mean x: 1749073541.0
[2025-06-05 01:40:37] 2025-06-04 23:23:02,237 | INFO     | mean y: 2485113.2994652404
[2025-06-05 01:40:37] 2025-06-04 23:23:02,237 | INFO     | -- intersect: 14939761588.23649
[2025-06-05 01:40:37] 2025-06-04 23:23:02,238 | INFO     | intersect: 14939761588.23649
[2025-06-05 01:40:37] 2025-06-04 23:23:02,238 | INFO     | chi2: 0.9536944858422542
[2025-06-05 01:40:37] 2025-06-04 23:23:02,242 | INFO     | current chi2=0.9536944858422542 (change=28.894134049104764 %)
[2025-06-05 01:40:37] 2025-06-04 23:23:02,243 | INFO     | sum of square deviations: 1869302025.5
[2025-06-05 01:40:37] 2025-06-04 23:23:02,244 | INFO     | sum of deviations: -11024856472.000002
[2025-06-05 01:40:37] 2025-06-04 23:23:02,244 | INFO     | mean x: 1749073693.5
[2025-06-05 01:40:37] 2025-06-04 23:23:02,244 | INFO     | mean y: 2479047.945054945
[2025-06-05 01:40:37] 2025-06-04 23:23:02,244 | INFO     | -- intersect: 10318247268.776323
[2025-06-05 01:40:37] 2025-06-04 23:23:02,245 | INFO     | intersect: 10318247268.776323
[2025-06-05 01:40:37] 2025-06-04 23:23:02,245 | INFO     | chi2: 0.9210226548365901
[2025-06-05 01:40:37] 2025-06-04 23:23:02,245 | INFO     | current chi2=0.9210226548365901 (change=3.425817333609734 %)
[2025-06-05 01:40:37] 2025-06-04 23:23:02,245 | INFO     | left removable region: 30
[2025-06-05 01:40:37] 2025-06-04 23:23:02,245 | INFO     | sum of square deviations: 1294014960.0
[2025-06-05 01:40:37] 2025-06-04 23:23:02,246 | INFO     | sum of deviations: 3329611434.0000005
[2025-06-05 01:40:37] 2025-06-04 23:23:02,247 | INFO     | mean x: 1749073968.0
[2025-06-05 01:40:37] 2025-06-04 23:23:02,247 | INFO     | mean y: 2490098.1925465837
[2025-06-05 01:40:37] 2025-06-04 23:23:02,247 | INFO     | -- intersect: -4498027177.716343
[2025-06-05 01:40:37] 2025-06-04 23:23:02,247 | INFO     | intersect: -4498027177.716343
[2025-06-05 01:40:37] 2025-06-04 23:23:02,247 | INFO     | chi2: 0.00035681908180642933
[2025-06-05 01:40:37] 2025-06-04 23:23:02,247 | INFO     | -- intersect: -4498027177.716343
[2025-06-05 01:40:37] 2025-06-04 23:23:02,248 | INFO     | current memory leak: 2.57 B/s (using 161 data points, chi2=0.00)
[2025-06-05 01:40:37] 2025-06-04 23:23:02,251 | INFO     | ..............................
[2025-06-05 01:40:37] 2025-06-04 23:23:02,252 | INFO     | . Timing measurements:
[2025-06-05 01:40:37] 2025-06-04 23:23:02,252 | INFO     | . get job = 0 s
[2025-06-05 01:40:37] 2025-06-04 23:23:02,252 | INFO     | . initial setup = 8 s
[2025-06-05 01:40:37] 2025-06-04 23:23:02,252 | INFO     | . payload setup = 182 s
[2025-06-05 01:40:37] 2025-06-04 23:23:02,252 | INFO     | . stage-in = 0 s
[2025-06-05 01:40:37] 2025-06-04 23:23:02,252 | INFO     | . payload execution = 12165 s
[2025-06-05 01:40:37] 2025-06-04 23:23:02,252 | INFO     | . stage-out = 3 s
[2025-06-05 01:40:37] 2025-06-04 23:23:02,252 | INFO     | . log creation = 1 s
[2025-06-05 01:40:37] 2025-06-04 23:23:02,252 | INFO     | ..............................
[2025-06-05 01:40:37] 2025-06-04 23:23:02,830 | INFO     | 
[2025-06-05 01:40:37] 2025-06-04 23:23:02,830 | INFO     | job summary report
[2025-06-05 01:40:37] 2025-06-04 23:23:02,831 | INFO     | --------------------------------------------------
[2025-06-05 01:40:37] 2025-06-04 23:23:02,831 | INFO     | PanDA job id: 6679000485
[2025-06-05 01:40:37] 2025-06-04 23:23:02,831 | INFO     | task id: 45006595
[2025-06-05 01:40:37] 2025-06-04 23:23:02,831 | INFO     | errors: (none)
[2025-06-05 01:40:37] 2025-06-04 23:23:02,831 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:40:37] 2025-06-04 23:23:02,831 | INFO     | pilot state: finished 
[2025-06-05 01:40:37] 2025-06-04 23:23:02,831 | INFO     | transexitcode: 0
[2025-06-05 01:40:37] 2025-06-04 23:23:02,831 | INFO     | exeerrorcode: 0
[2025-06-05 01:40:37] 2025-06-04 23:23:02,831 | INFO     | exeerrordiag: 
[2025-06-05 01:40:37] 2025-06-04 23:23:02,831 | INFO     | exitcode: 0
[2025-06-05 01:40:37] 2025-06-04 23:23:02,831 | INFO     | exitmsg: OK
[2025-06-05 01:40:37] 2025-06-04 23:23:02,831 | INFO     | cpuconsumptiontime: 44660 s
[2025-06-05 01:40:37] 2025-06-04 23:23:02,832 | INFO     | nevents: 400
[2025-06-05 01:40:37] 2025-06-04 23:23:02,832 | INFO     | neventsw: 0
[2025-06-05 01:40:37] 2025-06-04 23:23:02,832 | INFO     | pid: 722
[2025-06-05 01:40:37] 2025-06-04 23:23:02,832 | INFO     | pgrp: 722
[2025-06-05 01:40:37] 2025-06-04 23:23:02,832 | INFO     | corecount: 8
[2025-06-05 01:40:37] 2025-06-04 23:23:02,832 | INFO     | event service: False
[2025-06-05 01:40:37] 2025-06-04 23:23:02,832 | INFO     | sizes: {0: 2396463, 1: 2397149, 2: 2397348, 12: 2397348, 23: 2397376, 34: 2397404, 45: 2397560, 55: 2397588, 66: 2397616, 77: 2397644, 88: 2397700, 94: 2398214, 98
[2025-06-05 01:40:37] 2025-06-04 23:23:02,832 | INFO     | --------------------------------------------------
[2025-06-05 01:40:37] 2025-06-04 23:23:02,832 | INFO     | 
[2025-06-05 01:40:37] 2025-06-04 23:23:02,832 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-06-05 01:40:37] 2025-06-04 23:23:03,342 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:40:37] 2025-06-04 23:23:03,342 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:40:37] 2025-06-04 23:23:03,342 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:40:37] 2025-06-04 23:23:03,342 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:40:37] 2025-06-04 23:23:03,342 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:40:37] 2025-06-04 23:23:03,343 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:40:37] 2025-06-04 23:23:03,343 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:40:37] 2025-06-04 23:23:03,343 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:40:37] 2025-06-04 23:23:03,343 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:40:37] 2025-06-04 23:23:03,343 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:40:37] 2025-06-04 23:23:03,343 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:40:37] 2025-06-04 23:23:03,343 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:40:37] 2025-06-04 23:23:03,343 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:40:37] 2025-06-04 23:23:03,344 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:40:37] 2025-06-04 23:23:03,344 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:40:37] 2025-06-04 23:23:03,344 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:40:37] 2025-06-04 23:23:03,344 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:40:37] 2025-06-04 23:23:03,344 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:40:37] 2025-06-04 23:23:03,344 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:40:37] 2025-06-04 23:23:03,344 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:40:37] 2025-06-04 23:23:03,345 | INFO     | job 6679000485 has completed (purged errors)
[2025-06-05 01:40:37] 2025-06-04 23:23:03,345 | INFO     | overall cleanup function is called
[2025-06-05 01:40:37] 2025-06-04 23:23:04,354 | INFO     | --- collectZombieJob: --- 10, [722]
[2025-06-05 01:40:37] 2025-06-04 23:23:04,354 | INFO     | zombie collector waiting for pid 722
[2025-06-05 01:40:37] 2025-06-04 23:23:04,355 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:40:37] 2025-06-04 23:23:04,355 | INFO     | collected zombie processes
[2025-06-05 01:40:37] 2025-06-04 23:23:04,355 | INFO     | will attempt to kill all subprocesses of pid=722
[2025-06-05 01:40:37] 2025-06-04 23:23:04,475 | INFO     | process IDs to be killed: [722] (in reverse order)
[2025-06-05 01:40:37] 2025-06-04 23:23:05,436 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:40:37] 2025-06-04 23:23:05,436 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:40:37] 2025-06-04 23:23:05,439 | INFO     | did not find any defunct processes belonging to 722
[2025-06-05 01:40:37] 2025-06-04 23:23:05,442 | INFO     | did not find any defunct processes belonging to 722
[2025-06-05 01:40:37] 2025-06-04 23:23:05,442 | INFO     | ready for new job
[2025-06-05 01:40:37] 2025-06-04 23:23:05,443 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:40:37] 2025-06-04 23:23:05,449 | INFO     | **************************************
[2025-06-05 01:40:37] 2025-06-04 23:23:05,449 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:40:37] 2025-06-04 23:23:05,449 | INFO     | **************************************
[2025-06-05 01:40:37] 2025-06-04 23:23:05,449 | INFO     | 
[2025-06-05 01:40:37] 2025-06-04 23:23:05,450 | INFO     | pilot is running in a VM
[2025-06-05 01:40:37] 2025-06-04 23:23:05,450 | INFO     | architecture information:
[2025-06-05 01:40:37] 2025-06-04 23:23:05,464 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:40:37] 2025-06-04 23:23:05,755 | INFO     | cat /etc/os-release:
[2025-06-05 01:40:37] NAME="CentOS Linux"
[2025-06-05 01:40:37] VERSION="7 (Core)"
[2025-06-05 01:40:37] ID="centos"
[2025-06-05 01:40:37] ID_LIKE="rhel fedora"
[2025-06-05 01:40:37] VERSION_ID="7"
[2025-06-05 01:40:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:40:37] ANSI_COLOR="0;31"
[2025-06-05 01:40:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:40:37] HOME_URL="https://www.centos.org/"
[2025-06-05 01:40:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:40:37] 
[2025-06-05 01:40:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:40:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:40:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:40:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:40:37] 
[2025-06-05 01:40:37] 2025-06-04 23:23:05,755 | INFO     | **************************************
[2025-06-05 01:40:37] 2025-06-04 23:23:06,260 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-06-05 01:40:37] 2025-06-04 23:23:06,467 | INFO     | sufficient remaining disk space (497216913408 B)
[2025-06-05 01:40:37] 2025-06-04 23:23:06,468 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:40:37] 2025-06-04 23:23:06,468 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:40:37] 2025-06-04 23:23:06,468 | INFO     | update_server=False
[2025-06-05 01:40:37] 2025-06-04 23:23:06,468 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:40:37] 2025-06-04 23:23:06,820 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:40:37] 2025-06-04 23:23:06,821 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:40:37] 2025-06-04 23:23:06,821 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:40:37] 2025-06-04 23:23:06,830 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:40:37] 2025-06-04 23:23:06,937 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 01:40:37] 2025-06-04 23:23:06,937 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 01:40:37] 2025-06-04 23:23:06,938 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:40:37] 2025-06-04 23:23:06,938 | INFO     | will abort loop
[2025-06-05 01:40:37] 2025-06-04 23:23:07,170 | INFO     | all payload control threads have been joined
[2025-06-05 01:40:37] 2025-06-04 23:23:07,311 | INFO     | all data control threads have been joined
[2025-06-05 01:40:37] 2025-06-04 23:23:07,432 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:40:37] 2025-06-04 23:23:07,475 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:40:37] 2025-06-04 23:23:07,616 | INFO     | all job control threads have been joined
[2025-06-05 01:40:37] 2025-06-04 23:23:07,630 | INFO     | [job] validate thread has finished
[2025-06-05 01:40:37] 2025-06-04 23:23:07,685 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:40:37] 2025-06-04 23:23:07,759 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:40:37] 2025-06-04 23:23:07,943 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:40:37] 2025-06-04 23:23:08,176 | INFO     | [payload] control thread has finished
[2025-06-05 01:40:37] 2025-06-04 23:23:08,317 | INFO     | [data] control thread has finished
[2025-06-05 01:40:37] 2025-06-04 23:23:08,438 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:40:37] 2025-06-04 23:23:08,475 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:40:37] 2025-06-04 23:23:08,490 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:40:37] 2025-06-04 23:23:08,577 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:40:37] 2025-06-04 23:23:08,623 | INFO     | [job] control thread has finished
[2025-06-05 01:40:37] 2025-06-04 23:23:08,639 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:40:37] 2025-06-04 23:23:08,693 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:40:37] 2025-06-04 23:23:08,836 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:40:37] 2025-06-04 23:23:08,940 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:40:37] 2025-06-04 23:23:12,710 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:40:37] 2025-06-04 23:23:13,952 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140215593764672)>', '<ExcThread(monitor, started 140215146493696)>']
[2025-06-05 01:40:37] 2025-06-04 23:23:14,866 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:40:37] 2025-06-04 23:23:14,866 | INFO     | [monitor] control thread has ended
[2025-06-05 01:40:37] 2025-06-04 23:23:18,978 | INFO     | all workflow threads have been joined
[2025-06-05 01:40:37] 2025-06-04 23:23:18,978 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:40:37] 2025-06-04 23:23:18,979 | INFO     | traces error code: 0
[2025-06-05 01:40:37] 2025-06-04 23:23:18,979 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:40:37] 2025-06-04 23:23:19,435 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:40:37] 2025-06-04 23:23:19,542 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:40:37] 2025-06-04 23:23:19,655 [wrapper] pilotpid: 24503
[2025-06-05 01:40:37] 2025-06-04 23:23:19,767 [wrapper] Pilot exit status: 0
[2025-06-05 01:40:37] 2025-06-04 23:23:20,241 [wrapper] pandaids: 6679000485
[2025-06-05 01:40:37] 2025-06-04 23:23:20,864 [wrapper] cleanup supervisor_pilot 21503 24504
[2025-06-05 01:40:37] 2025-06-04 23:23:20,963 [wrapper] Test setup, not cleaning
[2025-06-05 01:40:37] 2025-06-04 23:23:21,037 [wrapper] apfmon messages muted
[2025-06-05 01:40:37] 2025-06-04 23:23:21,077 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:40:37] 2025-06-04 23:23:21,145 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:40:37]  *** Error codes and diagnostics ***
[2025-06-05 01:40:37]     "exeErrorCode": 0,
[2025-06-05 01:40:37]     "exeErrorDiag": "",
[2025-06-05 01:40:37]     "pilotErrorCode": 0,
[2025-06-05 01:40:37]     "pilotErrorDiag": "",
[2025-06-05 01:40:37]  *** Listing of results directory ***
[2025-06-05 01:40:37] total 383668
[2025-06-05 01:40:37] -rw-r--r--. 1 boinc boinc    495897 Jun  4 10:31 pilot3.tar.gz
[2025-06-05 01:40:37] -rw-r--r--. 1 boinc boinc      5111 Jun  4 10:38 queuedata.json
[2025-06-05 01:40:37] -rwx------. 1 boinc boinc     37140 Jun  4 10:39 runpilot2-wrapper.sh
[2025-06-05 01:40:37] -rw-r--r--. 1 boinc boinc       100 Jun  4 21:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:40:37] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 21:48 run_atlas
[2025-06-05 01:40:37] -rw-r--r--. 1 boinc boinc       105 Jun  4 21:48 job.xml
[2025-06-05 01:40:37] -rw-r--r--. 1 boinc boinc      6392 Jun  4 21:48 init_data.xml
[2025-06-05 01:40:37] -rw-r--r--. 2 boinc boinc 213160577 Jun  4 21:48 EVNT.45006593._001122.pool.root.1
[2025-06-05 01:40:37] -rw-r--r--. 2 boinc boinc     15093 Jun  4 21:48 start_atlas.sh
[2025-06-05 01:40:37] drwxrwx--x. 2 boinc boinc        68 Jun  4 21:48 shared
[2025-06-05 01:40:37] -rw-r--r--. 2 boinc boinc    508880 Jun  4 21:48 input.tar.gz
[2025-06-05 01:40:37] -rw-r--r--. 1 boinc boinc         0 Jun  4 21:48 boinc_lockfile
[2025-06-05 01:40:37] -rw-r--r--. 1 boinc boinc      2524 Jun  4 21:49 pandaJob.out
[2025-06-05 01:40:37] -rw-------. 1 boinc boinc    991007 Jun  4 21:52 agis_schedconf.cvmfs.json
[2025-06-05 01:40:37] drwx------. 4 boinc boinc      4096 Jun  4 21:52 pilot3
[2025-06-05 01:40:37] -rw-------. 1 boinc boinc 172986688 Jun  5 01:20 HITS.45006595._055764.pool.root.1
[2025-06-05 01:40:37] -rw-r--r--. 1 boinc boinc       531 Jun  5 01:20 boinc_task_state.xml
[2025-06-05 01:40:37] -rw-------. 1 boinc boinc      1017 Jun  5 01:21 memory_monitor_summary.json
[2025-06-05 01:40:37] -rw-------. 1 boinc boinc   1598969 Jun  5 01:21 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:40:37] -rw-------. 1 boinc boinc    360520 Jun  5 01:21 log.45006595._055764.job.log.tgz.1
[2025-06-05 01:40:37] -rw-------. 1 boinc boinc        95 Jun  5 01:22 pilot_heartbeat.json
[2025-06-05 01:40:37] -rw-------. 1 boinc boinc      7687 Jun  5 01:23 heartbeat.json
[2025-06-05 01:40:37] -rw-------. 1 boinc boinc      4603 Jun  5 01:23 pilotlog.txt
[2025-06-05 01:40:37] -rw-------. 1 boinc boinc   1089990 Jun  5 01:23 log.45006595._055764.job.log.1
[2025-06-05 01:40:37] -rw-------. 1 boinc boinc       357 Jun  5 01:23 output.list
[2025-06-05 01:40:37] -rw-r--r--. 1 boinc boinc       620 Jun  5 01:23 runtime_log
[2025-06-05 01:40:37] -rw-------. 1 boinc boinc   1474560 Jun  5 01:23 result.tar.gz
[2025-06-05 01:40:37] -rw-r--r--. 1 boinc boinc      8673 Jun  5 01:23 runtime_log.err
[2025-06-05 01:40:37] -rw-------. 1 boinc boinc       656 Jun  5 01:23 pHIODmvpyg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmUyaKDmjUao3m.diag
[2025-06-05 01:40:37] -rw-r--r--. 1 boinc boinc      8192 Jun  5 01:40 boinc_mmap_file
[2025-06-05 01:40:37] -rw-r--r--. 1 boinc boinc        28 Jun  5 01:40 wrapper_checkpoint.txt
[2025-06-05 01:40:37] -rw-r--r--. 1 boinc boinc     20478 Jun  5 01:40 stderr.txt
[2025-06-05 01:40:37] HITS file was successfully produced:
[2025-06-05 01:40:37] -rw-------. 1 boinc boinc 172986688 Jun  5 01:20 shared/HITS.pool.root.1
[2025-06-05 01:40:37]  *** Contents of shared directory: ***
[2025-06-05 01:40:37] total 379060
[2025-06-05 01:40:37] -rw-r--r--. 2 boinc boinc 213160577 Jun  4 21:48 ATLAS.root_0
[2025-06-05 01:40:37] -rw-r--r--. 2 boinc boinc     15093 Jun  4 21:48 start_atlas.sh
[2025-06-05 01:40:37] -rw-r--r--. 2 boinc boinc    508880 Jun  4 21:48 input.tar.gz
[2025-06-05 01:40:37] -rw-------. 1 boinc boinc 172986688 Jun  5 01:20 HITS.pool.root.1
[2025-06-05 01:40:37] -rw-------. 1 boinc boinc   1474560 Jun  5 01:23 result.tar.gz
01:40:39 (20802): run_atlas exited; CPU time 44825.554413
01:40:39 (20802): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN