Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:47:43 (17178): wrapper (7.7.26015): starting
08:47:43 (17178): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 08:47:43] Arguments: --nthreads 12
[2025-06-04 08:47:43] Threads: 12
[2025-06-04 08:47:43] Checking for CVMFS
[2025-06-04 08:47:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:47:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:47:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:47:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:47:43] 2.11.2.0 2914 35701 84876 146780 0 58 18698033 20275200 1 130560 0 16128025 99.983 6258925 7651 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 08:47:43] CVMFS is ok
[2025-06-04 08:47:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:47:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:47:43] Further information can be found at the LHC@home message board.
[2025-06-04 08:47:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:47:43] Checking for apptainer binary...
[2025-06-04 08:47:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:47:43] Running /usr/bin/apptainer --version
[2025-06-04 08:47:43] apptainer version 1.3.2-1.el7
[2025-06-04 08:47:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:47:45] c-205-5.aglt2.org
[2025-06-04 08:47:45] apptainer works
[2025-06-04 08:47:45] Set ATHENA_PROC_NUMBER=12
[2025-06-04 08:47:45] Set ATHENA_CORE_NUMBER=12
[2025-06-04 08:47:45] Starting ATLAS job with PandaID=6678912925
[2025-06-04 08:47:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:51:51]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:51:51]  filetype=log
[2025-06-04 09:51:51]  guid=b21f2cc4-5bda-490b-83ce-a6c3a07b0872
[2025-06-04 09:51:51]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 09:51:51]  is_altstaged=None
[2025-06-04 09:51:51]  is_tar=False
[2025-06-04 09:51:51]  lfn=log.45006595._055684.job.log.tgz.1
[2025-06-04 09:51:51]  mtime=0
[2025-06-04 09:51:51]  protocol_id=None
[2025-06-04 09:51:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:51:51]  replicas=None
[2025-06-04 09:51:51]  scope=mc23_13p6TeV
[2025-06-04 09:51:51]  status=None
[2025-06-04 09:51:51]  status_code=0
[2025-06-04 09:51:51]  storage_token=
[2025-06-04 09:51:51]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678912925/log.45006595._055684.job.log.tgz.1
[2025-06-04 09:51:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/73/4a/log.45006595._055684.job.log.tgz.1
[2025-06-04 09:51:51]  workdir=None
[2025-06-04 09:51:51] ]
[2025-06-04 09:51:51] 2025-06-04 13:51:25,901 | INFO     | transferring file log.45006595._055684.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678912925/log.45006595._055684.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:51:51] 2025-06-04 13:51:25,901 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678912925/log.45006595._055684.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._055684.job
[2025-06-04 09:51:51] 2025-06-04 13:51:25,925 | INFO     | adding to output.list: log.45006595._055684.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/73/4a/log.45006595._055684.job.log.tg
[2025-06-04 09:51:51] 2025-06-04 13:51:25,926 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:51:51] 2025-06-04 13:51:25,926 | INFO     | summary of transferred files:
[2025-06-04 09:51:51] 2025-06-04 13:51:25,927 | INFO     |  -- lfn=log.45006595._055684.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:51:51] 2025-06-04 13:51:25,927 | INFO     | stage-out finished correctly
[2025-06-04 09:51:51] 2025-06-04 13:51:26,542 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:51:51] 2025-06-04 13:51:26,710 | INFO     | monitor loop #288: job 0:6678912925 is in state 'finished'
[2025-06-04 09:51:51] 2025-06-04 13:51:26,710 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:51:51] 2025-06-04 13:51:26,926 | INFO     | job 6678912925 has state=finished
[2025-06-04 09:51:51] 2025-06-04 13:51:26,926 | INFO     | preparing for final server update for job 6678912925 in state='finished'
[2025-06-04 09:51:51] 2025-06-04 13:51:26,927 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:51:51] 2025-06-04 13:51:26,927 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:51:51] 2025-06-04 13:51:26,927 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:51:51] 2025-06-04 13:51:26,927 | INFO     | job 6678912925 has finished - writing final server update
[2025-06-04 09:51:51] 2025-06-04 13:51:26,928 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:51:51] 2025-06-04 13:51:26,929 | INFO     | executing command: lscpu
[2025-06-04 09:51:51] 2025-06-04 13:51:26,956 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:51:51] 2025-06-04 13:51:28,360 | INFO     | PID=20777 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 09:51:51] 2025-06-04 13:51:29,213 | INFO     | monitor loop #289: job 0:6678912925 is in state 'finished'
[2025-06-04 09:51:51] 2025-06-04 13:51:29,214 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:51:51] 2025-06-04 13:51:31,596 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 09:51:51] 2025-06-04 13:51:31,596 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678912925/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:51:51] 2025-06-04 13:51:31,612 | INFO     | extracted standard info from prmon json
[2025-06-04 09:51:51] 2025-06-04 13:51:31,612 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:51:51] 2025-06-04 13:51:31,612 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:51:51] 2025-06-04 13:51:31,613 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:51:51] 2025-06-04 13:51:31,613 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:51:51] 2025-06-04 13:51:31,615 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:51:51] 2025-06-04 13:51:31,615 | INFO     | sum of square deviations: 51573060.0
[2025-06-04 09:51:51] 2025-06-04 13:51:31,616 | INFO     | sum of deviations: -4932499284.0
[2025-06-04 09:51:51] 2025-06-04 13:51:31,616 | INFO     | mean x: 1749043261.0
[2025-06-04 09:51:51] 2025-06-04 13:51:31,616 | INFO     | mean y: 2765393.981818182
[2025-06-04 09:51:51] 2025-06-04 13:51:31,616 | INFO     | -- intersect: 167283020483.89746
[2025-06-04 09:51:51] 2025-06-04 13:51:31,617 | INFO     | intersect: 167283020483.89746
[2025-06-04 09:51:51] 2025-06-04 13:51:31,617 | INFO     | chi2: 0.0756785127324231
[2025-06-04 09:51:51] 2025-06-04 13:51:31,617 | INFO     | -- intersect: 167283020483.89746
[2025-06-04 09:51:51] 2025-06-04 13:51:31,617 | INFO     | current memory leak: -95.64 B/s (using 55 data points, chi2=0.08)
[2025-06-04 09:51:51] 2025-06-04 13:51:31,618 | INFO     | ..............................
[2025-06-04 09:51:51] 2025-06-04 13:51:31,618 | INFO     | . Timing measurements:
[2025-06-04 09:51:51] 2025-06-04 13:51:31,618 | INFO     | . get job = 0 s
[2025-06-04 09:51:51] 2025-06-04 13:51:31,618 | INFO     | . initial setup = 2 s
[2025-06-04 09:51:51] 2025-06-04 13:51:31,618 | INFO     | . payload setup = 9 s
[2025-06-04 09:51:51] 2025-06-04 13:51:31,618 | INFO     | . stage-in = 0 s
[2025-06-04 09:51:51] 2025-06-04 13:51:31,618 | INFO     | . payload execution = 3777 s
[2025-06-04 09:51:51] 2025-06-04 13:51:31,618 | INFO     | . stage-out = 0 s
[2025-06-04 09:51:51] 2025-06-04 13:51:31,619 | INFO     | . log creation = 0 s
[2025-06-04 09:51:51] 2025-06-04 13:51:31,619 | INFO     | ..............................
[2025-06-04 09:51:51] 2025-06-04 13:51:31,705 | INFO     | 
[2025-06-04 09:51:51] 2025-06-04 13:51:31,705 | INFO     | job summary report
[2025-06-04 09:51:51] 2025-06-04 13:51:31,705 | INFO     | --------------------------------------------------
[2025-06-04 09:51:51] 2025-06-04 13:51:31,705 | INFO     | PanDA job id: 6678912925
[2025-06-04 09:51:51] 2025-06-04 13:51:31,705 | INFO     | task id: 45006595
[2025-06-04 09:51:51] 2025-06-04 13:51:31,705 | INFO     | errors: (none)
[2025-06-04 09:51:51] 2025-06-04 13:51:31,705 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:51:51] 2025-06-04 13:51:31,706 | INFO     | pilot state: finished 
[2025-06-04 09:51:51] 2025-06-04 13:51:31,706 | INFO     | transexitcode: 0
[2025-06-04 09:51:51] 2025-06-04 13:51:31,706 | INFO     | exeerrorcode: 0
[2025-06-04 09:51:51] 2025-06-04 13:51:31,706 | INFO     | exeerrordiag: 
[2025-06-04 09:51:51] 2025-06-04 13:51:31,706 | INFO     | exitcode: 0
[2025-06-04 09:51:51] 2025-06-04 13:51:31,706 | INFO     | exitmsg: OK
[2025-06-04 09:51:51] 2025-06-04 13:51:31,706 | INFO     | cpuconsumptiontime: 39956 s
[2025-06-04 09:51:51] 2025-06-04 13:51:31,706 | INFO     | nevents: 400
[2025-06-04 09:51:51] 2025-06-04 13:51:31,706 | INFO     | neventsw: 0
[2025-06-04 09:51:51] 2025-06-04 13:51:31,706 | INFO     | pid: 27256
[2025-06-04 09:51:51] 2025-06-04 13:51:31,707 | INFO     | pgrp: 27256
[2025-06-04 09:51:51] 2025-06-04 13:51:31,707 | INFO     | corecount: 12
[2025-06-04 09:51:51] 2025-06-04 13:51:31,707 | INFO     | event service: False
[2025-06-04 09:51:51] 2025-06-04 13:51:31,707 | INFO     | sizes: {0: 2396462, 1: 2397318, 6: 2397524, 12: 2397552, 3790: 2423174, 3791: 2432115, 3792: 2432299, 3797: 2432469}
[2025-06-04 09:51:51] 2025-06-04 13:51:31,707 | INFO     | --------------------------------------------------
[2025-06-04 09:51:51] 2025-06-04 13:51:31,707 | INFO     | 
[2025-06-04 09:51:51] 2025-06-04 13:51:31,707 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 09:51:51] 2025-06-04 13:51:31,730 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:51:51] 2025-06-04 13:51:31,731 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:51:51] 2025-06-04 13:51:31,731 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:51:51] 2025-06-04 13:51:31,731 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:51:51] 2025-06-04 13:51:31,731 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:51:51] 2025-06-04 13:51:31,732 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:51:51] 2025-06-04 13:51:31,732 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:51:51] 2025-06-04 13:51:31,732 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:51:51] 2025-06-04 13:51:31,732 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:51:51] 2025-06-04 13:51:31,732 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:51:51] 2025-06-04 13:51:31,732 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:51:51] 2025-06-04 13:51:31,733 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:51:51] 2025-06-04 13:51:31,733 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:51:51] 2025-06-04 13:51:31,733 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:51:51] 2025-06-04 13:51:31,733 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:51:51] 2025-06-04 13:51:31,733 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:51:51] 2025-06-04 13:51:31,733 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:51:51] 2025-06-04 13:51:31,734 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:51:51] 2025-06-04 13:51:31,734 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:51:51] 2025-06-04 13:51:31,734 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:51:51] 2025-06-04 13:51:31,734 | INFO     | job 6678912925 has completed (purged errors)
[2025-06-04 09:51:51] 2025-06-04 13:51:31,734 | INFO     | overall cleanup function is called
[2025-06-04 09:51:51] 2025-06-04 13:51:32,743 | INFO     | --- collectZombieJob: --- 10, [27256]
[2025-06-04 09:51:51] 2025-06-04 13:51:32,743 | INFO     | zombie collector waiting for pid 27256
[2025-06-04 09:51:51] 2025-06-04 13:51:32,743 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:51:51] 2025-06-04 13:51:32,743 | INFO     | collected zombie processes
[2025-06-04 09:51:51] 2025-06-04 13:51:32,743 | INFO     | will attempt to kill all subprocesses of pid=27256
[2025-06-04 09:51:51] 2025-06-04 13:51:32,834 | INFO     | process IDs to be killed: [27256] (in reverse order)
[2025-06-04 09:51:51] 2025-06-04 13:51:32,886 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:51:51] 2025-06-04 13:51:32,886 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:51:51] 2025-06-04 13:51:32,889 | INFO     | did not find any defunct processes belonging to 27256
[2025-06-04 09:51:51] 2025-06-04 13:51:32,891 | INFO     | did not find any defunct processes belonging to 27256
[2025-06-04 09:51:51] 2025-06-04 13:51:32,891 | INFO     | ready for new job
[2025-06-04 09:51:51] 2025-06-04 13:51:32,892 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:51:51] 2025-06-04 13:51:32,892 | INFO     | **************************************
[2025-06-04 09:51:51] 2025-06-04 13:51:32,893 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:51:51] 2025-06-04 13:51:32,893 | INFO     | **************************************
[2025-06-04 09:51:51] 2025-06-04 13:51:32,893 | INFO     | 
[2025-06-04 09:51:51] 2025-06-04 13:51:32,893 | INFO     | architecture information:
[2025-06-04 09:51:51] 2025-06-04 13:51:32,894 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:51:51] 2025-06-04 13:51:32,910 | INFO     | cat /etc/os-release:
[2025-06-04 09:51:51] NAME="CentOS Linux"
[2025-06-04 09:51:51] VERSION="7 (Core)"
[2025-06-04 09:51:51] ID="centos"
[2025-06-04 09:51:51] ID_LIKE="rhel fedora"
[2025-06-04 09:51:51] VERSION_ID="7"
[2025-06-04 09:51:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:51:51] ANSI_COLOR="0;31"
[2025-06-04 09:51:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:51:51] HOME_URL="https://www.centos.org/"
[2025-06-04 09:51:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:51:51] 
[2025-06-04 09:51:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:51:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:51:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:51:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:51:51] 
[2025-06-04 09:51:51] 2025-06-04 13:51:32,911 | INFO     | **************************************
[2025-06-04 09:51:51] 2025-06-04 13:51:33,414 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 09:51:51] 2025-06-04 13:51:33,431 | INFO     | sufficient remaining disk space (29427236864 B)
[2025-06-04 09:51:51] 2025-06-04 13:51:33,432 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:51:51] 2025-06-04 13:51:33,432 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:51:51] 2025-06-04 13:51:33,432 | INFO     | update_server=False
[2025-06-04 09:51:51] 2025-06-04 13:51:33,432 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:51:51] 2025-06-04 13:51:33,433 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:51:51] 2025-06-04 13:51:33,433 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:51:51] 2025-06-04 13:51:33,434 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:51:51] 2025-06-04 13:51:33,434 | INFO     | aborting loop
[2025-06-04 09:51:51] 2025-06-04 13:51:33,781 | INFO     | all job control threads have been joined
[2025-06-04 09:51:51] 2025-06-04 13:51:33,783 | INFO     | all payload control threads have been joined
[2025-06-04 09:51:51] 2025-06-04 13:51:33,888 | INFO     | all data control threads have been joined
[2025-06-04 09:51:51] 2025-06-04 13:51:34,021 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:51:51] 2025-06-04 13:51:34,374 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:51:51] 2025-06-04 13:51:34,374 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:51:51] 2025-06-04 13:51:34,374 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:51:51] 2025-06-04 13:51:34,437 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:51:51] 2025-06-04 13:51:34,439 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:51:51] 2025-06-04 13:51:34,440 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:51:51] 2025-06-04 13:51:34,454 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:51:51] 2025-06-04 13:51:34,783 | INFO     | [job] control thread has finished
[2025-06-04 09:51:51] 2025-06-04 13:51:34,788 | INFO     | [payload] control thread has finished
[2025-06-04 09:51:51] 2025-06-04 13:51:34,851 | INFO     | [job] validate thread has finished
[2025-06-04 09:51:51] 2025-06-04 13:51:34,893 | INFO     | [data] control thread has finished
[2025-06-04 09:51:51] 2025-06-04 13:51:35,060 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:51:51] 2025-06-04 13:51:35,139 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:51:51] 2025-06-04 13:51:35,363 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:51:51] 2025-06-04 13:51:35,414 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:51:51] 2025-06-04 13:51:35,814 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:51:51] 2025-06-04 13:51:36,027 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:51:51] 2025-06-04 13:51:37,439 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:51:51] 2025-06-04 13:51:44,157 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:51:51] 2025-06-04 13:51:45,159 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:51:51] 2025-06-04 13:51:46,304 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139822748337984)>', '<ExcThread(monitor, started 139821561399040)>']
[2025-06-04 09:51:51] 2025-06-04 13:51:46,424 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:51:51] 2025-06-04 13:51:46,424 | INFO     | [monitor] control thread has ended
[2025-06-04 09:51:51] 2025-06-04 13:51:51,312 | INFO     | all workflow threads have been joined
[2025-06-04 09:51:51] 2025-06-04 13:51:51,320 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:51:51] 2025-06-04 13:51:51,321 | INFO     | traces error code: 0
[2025-06-04 09:51:51] 2025-06-04 13:51:51,323 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:51:51] 2025-06-04 13:51:51,428 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:51:51] 2025-06-04 13:51:51,431 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:51:51] 2025-06-04 13:51:51,435 [wrapper] pilotpid: 20777
[2025-06-04 09:51:51] 2025-06-04 13:51:51,439 [wrapper] Pilot exit status: 0
[2025-06-04 09:51:51] 2025-06-04 13:51:51,455 [wrapper] pandaids: 6678912925
[2025-06-04 09:51:51] 2025-06-04 13:51:51,495 [wrapper] cleanup supervisor_pilot  6360 20778
[2025-06-04 09:51:51] 2025-06-04 13:51:51,499 [wrapper] Test setup, not cleaning
[2025-06-04 09:51:51] 2025-06-04 13:51:51,503 [wrapper] apfmon messages muted
[2025-06-04 09:51:51] 2025-06-04 13:51:51,507 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:51:51] 2025-06-04 13:51:51,511 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:51:51]  *** Error codes and diagnostics ***
[2025-06-04 09:51:51]     "exeErrorCode": 0,
[2025-06-04 09:51:51]     "exeErrorDiag": "",
[2025-06-04 09:51:51]     "pilotErrorCode": 0,
[2025-06-04 09:51:51]     "pilotErrorDiag": "",
[2025-06-04 09:51:51]  *** Listing of results directory ***
[2025-06-04 09:51:51] total 382080
[2025-06-04 09:51:51] -rwx------ 1 boincer umatlas     37140 Jun  4 04:31 runpilot2-wrapper.sh
[2025-06-04 09:51:51] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 04:31 pilot3.tar.gz
[2025-06-04 09:51:51] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 04:32 queuedata.json
[2025-06-04 09:51:51] -rw-r--r-- 1 boincer umatlas       100 Jun  4 08:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:51:51] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 08:47 run_atlas
[2025-06-04 09:51:51] -rw-r--r-- 1 boincer umatlas       105 Jun  4 08:47 job.xml
[2025-06-04 09:51:51] -rw-r--r-- 2 boincer umatlas 214627938 Jun  4 08:47 EVNT.45006593._000774.pool.root.1
[2025-06-04 09:51:51] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:47 start_atlas.sh
[2025-06-04 09:51:51] drwxrwx--x 2 boincer umatlas      4096 Jun  4 08:47 shared
[2025-06-04 09:51:51] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 08:47 input.tar.gz
[2025-06-04 09:51:51] -rw-r--r-- 1 boincer umatlas         0 Jun  4 08:47 boinc_lockfile
[2025-06-04 09:51:51] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 08:47 pandaJob.out
[2025-06-04 09:51:51] -rw------- 1 boincer umatlas    986811 Jun  4 08:47 agis_schedconf.cvmfs.json
[2025-06-04 09:51:51] -rw------- 1 boincer umatlas   1598969 Jun  4 08:47 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:51:51] drwx------ 4 boincer umatlas      4096 Jun  4 08:47 pilot3
[2025-06-04 09:51:51] -rw-r--r-- 1 boincer umatlas      5867 Jun  4 09:45 init_data.xml
[2025-06-04 09:51:51] -rw------- 1 boincer umatlas        95 Jun  4 09:50 pilot_heartbeat.json
[2025-06-04 09:51:51] -rw------- 1 boincer umatlas 171313070 Jun  4 09:50 HITS.45006595._055684.pool.root.1
[2025-06-04 09:51:51] -rw-r--r-- 1 boincer umatlas       529 Jun  4 09:51 boinc_task_state.xml
[2025-06-04 09:51:51] -rw------- 1 boincer umatlas      1047 Jun  4 09:51 memory_monitor_summary.json
[2025-06-04 09:51:51] -rw------- 1 boincer umatlas    366026 Jun  4 09:51 log.45006595._055684.job.log.tgz.1
[2025-06-04 09:51:51] -rw------- 1 boincer umatlas      7751 Jun  4 09:51 heartbeat.json
[2025-06-04 09:51:51] -rw------- 1 boincer umatlas      4425 Jun  4 09:51 pilotlog.txt
[2025-06-04 09:51:51] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 09:51 boinc_mmap_file
[2025-06-04 09:51:51] -rw-r--r-- 1 boincer umatlas        27 Jun  4 09:51 wrapper_checkpoint.txt
[2025-06-04 09:51:51] -rw------- 1 boincer umatlas    376405 Jun  4 09:51 log.45006595._055684.job.log.1
[2025-06-04 09:51:51] -rw------- 1 boincer umatlas       357 Jun  4 09:51 output.list
[2025-06-04 09:51:51] -rw-r--r-- 1 boincer umatlas       620 Jun  4 09:51 runtime_log
[2025-06-04 09:51:51] -rw------- 1 boincer umatlas    757760 Jun  4 09:51 result.tar.gz
[2025-06-04 09:51:51] -rw-r--r-- 1 boincer umatlas      8656 Jun  4 09:51 runtime_log.err
[2025-06-04 09:51:51] -rw------- 1 boincer umatlas       658 Jun  4 09:51 56YNDmZiyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8mnKDmf7ohBo.diag
[2025-06-04 09:51:51] -rw-r--r-- 1 boincer umatlas     21261 Jun  4 09:51 stderr.txt
[2025-06-04 09:51:51] HITS file was successfully produced:
[2025-06-04 09:51:51] -rw------- 1 boincer umatlas 171313070 Jun  4 09:50 shared/HITS.pool.root.1
[2025-06-04 09:51:51]  *** Contents of shared directory: ***
[2025-06-04 09:51:51] total 378160
[2025-06-04 09:51:51] -rw-r--r-- 2 boincer umatlas 214627938 Jun  4 08:47 ATLAS.root_0
[2025-06-04 09:51:51] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:47 start_atlas.sh
[2025-06-04 09:51:51] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 08:47 input.tar.gz
[2025-06-04 09:51:51] -rw------- 1 boincer umatlas 171313070 Jun  4 09:50 HITS.pool.root.1
[2025-06-04 09:51:51] -rw------- 1 boincer umatlas    757760 Jun  4 09:51 result.tar.gz
09:51:53 (17178): run_atlas exited; CPU time 39928.880445
09:51:53 (17178): called boinc_finish(0)

</stderr_txt>
]]>

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