Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:53:24 (4805): wrapper (7.7.26015): starting
08:53:24 (4805): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:53:24] Arguments: --nthreads 8
[2025-06-04 08:53:24] Threads: 8
[2025-06-04 08:53:24] Checking for CVMFS
[2025-06-04 08:53:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:53:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:53:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:53:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:53:24] 2.11.2.0 2893 35660 77268 146780 1 57 18726812 20275201 1 130560 0 11689463 99.977 6247798 7661 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 08:53:24] CVMFS is ok
[2025-06-04 08:53:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:53:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:53:24] Further information can be found at the LHC@home message board.
[2025-06-04 08:53:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:53:24] Checking for apptainer binary...
[2025-06-04 08:53:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:53:24] Running /usr/bin/apptainer --version
[2025-06-04 08:53:24] apptainer version 1.3.2-1.el7
[2025-06-04 08:53:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:53:26] c-115-6.aglt2.org
[2025-06-04 08:53:26] apptainer works
[2025-06-04 08:53:26] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:53:26] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:53:26] Starting ATLAS job with PandaID=6678998552
[2025-06-04 08:53:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:35:43]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:35:43] 2025-06-04 14:35:27,422 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 10:35:43] 2025-06-04 14:35:27,423 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678998552/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:35:43] 2025-06-04 14:35:27,424 | INFO     | extracted standard info from prmon json
[2025-06-04 10:35:43] 2025-06-04 14:35:27,424 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:35:43] 2025-06-04 14:35:27,424 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:35:43] 2025-06-04 14:35:27,425 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:35:43] 2025-06-04 14:35:27,425 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:35:43] 2025-06-04 14:35:27,429 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:35:43] 2025-06-04 14:35:27,429 | INFO     | sum of square deviations: 310052325.0
[2025-06-04 10:35:43] 2025-06-04 14:35:27,430 | INFO     | sum of deviations: -1957125067.500001
[2025-06-04 10:35:43] 2025-06-04 14:35:27,430 | INFO     | mean x: 1749044673.5
[2025-06-04 10:35:43] 2025-06-04 14:35:27,430 | INFO     | mean y: 2467166.37
[2025-06-04 10:35:43] 2025-06-04 14:35:27,430 | INFO     | -- intersect: 11042859057.26843
[2025-06-04 10:35:43] 2025-06-04 14:35:27,431 | INFO     | intersect: 11042859057.26843
[2025-06-04 10:35:43] 2025-06-04 14:35:27,431 | INFO     | chi2: 2.374751772232087
[2025-06-04 10:35:43] 2025-06-04 14:35:27,431 | INFO     | sum of square deviations: 265828240.0
[2025-06-04 10:35:43] 2025-06-04 14:35:27,432 | INFO     | sum of deviations: 4973163165.000007
[2025-06-04 10:35:43] 2025-06-04 14:35:27,432 | INFO     | mean x: 1749044521.0
[2025-06-04 10:35:43] 2025-06-04 14:35:27,432 | INFO     | mean y: 2490095.8105263156
[2025-06-04 10:35:43] 2025-06-04 14:35:27,432 | INFO     | -- intersect: -32718953591.971783
[2025-06-04 10:35:43] 2025-06-04 14:35:27,432 | INFO     | intersect: -32718953591.971783
[2025-06-04 10:35:43] 2025-06-04 14:35:27,433 | INFO     | chi2: 1.5150385663794468
[2025-06-04 10:35:43] 2025-06-04 14:35:27,433 | INFO     | current chi2=1.5150385663794468 (change=36.20223452005575 %)
[2025-06-04 10:35:43] 2025-06-04 14:35:27,433 | INFO     | sum of square deviations: 226022842.5
[2025-06-04 10:35:43] 2025-06-04 14:35:27,434 | INFO     | sum of deviations: 4813405506.999998
[2025-06-04 10:35:43] 2025-06-04 14:35:27,434 | INFO     | mean x: 1749044368.5
[2025-06-04 10:35:43] 2025-06-04 14:35:27,434 | INFO     | mean y: 2489483.2444444443
[2025-06-04 10:35:43] 2025-06-04 14:35:27,434 | INFO     | -- intersect: -37245337781.49422
[2025-06-04 10:35:43] 2025-06-04 14:35:27,434 | INFO     | intersect: -37245337781.49422
[2025-06-04 10:35:43] 2025-06-04 14:35:27,434 | INFO     | chi2: 1.5187240003457898
[2025-06-04 10:35:43] 2025-06-04 14:35:27,434 | INFO     | current chi2=1.5187240003457898 (change=-0.2432567756443496 %)
[2025-06-04 10:35:43] 2025-06-04 14:35:27,435 | INFO     | right removable region: 89
[2025-06-04 10:35:43] 2025-06-04 14:35:27,435 | INFO     | sum of square deviations: 265828240.0
[2025-06-04 10:35:43] 2025-06-04 14:35:27,435 | INFO     | sum of deviations: -15818767781.999998
[2025-06-04 10:35:43] 2025-06-04 14:35:27,436 | INFO     | mean x: 1749044826.0
[2025-06-04 10:35:43] 2025-06-04 14:35:27,436 | INFO     | mean y: 2513788.5894736843
[2025-06-04 10:35:43] 2025-06-04 14:35:27,436 | INFO     | -- intersect: 104083757913.75313
[2025-06-04 10:35:43] 2025-06-04 14:35:27,436 | INFO     | intersect: 104083757913.75313
[2025-06-04 10:35:43] 2025-06-04 14:35:27,436 | INFO     | chi2: 0.9975885282916714
[2025-06-04 10:35:43] 2025-06-04 14:35:27,436 | INFO     | current chi2=0.9975885282916714 (change=57.991881932400304 %)
[2025-06-04 10:35:43] 2025-06-04 14:35:27,436 | INFO     | sum of square deviations: 226022842.5
[2025-06-04 10:35:43] 2025-06-04 14:35:27,437 | INFO     | sum of deviations: -12840042225.5
[2025-06-04 10:35:43] 2025-06-04 14:35:27,437 | INFO     | mean x: 1749044978.5
[2025-06-04 10:35:43] 2025-06-04 14:35:27,437 | INFO     | mean y: 2502327.611111111
[2025-06-04 10:35:43] 2025-06-04 14:35:27,437 | INFO     | -- intersect: 99363306438.544
[2025-06-04 10:35:43] 2025-06-04 14:35:27,438 | INFO     | intersect: 99363306438.544
[2025-06-04 10:35:43] 2025-06-04 14:35:27,438 | INFO     | chi2: 0.9919995364560477
[2025-06-04 10:35:43] 2025-06-04 14:35:27,438 | INFO     | current chi2=0.9919995364560477 (change=0.5602502110960211 %)
[2025-06-04 10:35:43] 2025-06-04 14:35:27,438 | INFO     | left removable region: 20
[2025-06-04 10:35:43] 2025-06-04 14:35:27,438 | INFO     | sum of square deviations: 101843770.0
[2025-06-04 10:35:43] 2025-06-04 14:35:27,439 | INFO     | sum of deviations: -61201055.99999999
[2025-06-04 10:35:43] 2025-06-04 14:35:27,439 | INFO     | mean x: 1749044948.0
[2025-06-04 10:35:43] 2025-06-04 14:35:27,439 | INFO     | mean y: 2498579.579710145
[2025-06-04 10:35:43] 2025-06-04 14:35:27,439 | INFO     | -- intersect: 1053553521.9592497
[2025-06-04 10:35:43] 2025-06-04 14:35:27,439 | INFO     | intersect: 1053553521.9592497
[2025-06-04 10:35:43] 2025-06-04 14:35:27,439 | INFO     | chi2: 0.01277003668433671
[2025-06-04 10:35:43] 2025-06-04 14:35:27,440 | INFO     | -- intersect: 1053553521.9592497
[2025-06-04 10:35:43] 2025-06-04 14:35:27,440 | INFO     | current memory leak: -0.60 B/s (using 69 data points, chi2=0.01)
[2025-06-04 10:35:43] 2025-06-04 14:35:27,440 | INFO     | ..............................
[2025-06-04 10:35:43] 2025-06-04 14:35:27,440 | INFO     | . Timing measurements:
[2025-06-04 10:35:43] 2025-06-04 14:35:27,440 | INFO     | . get job = 0 s
[2025-06-04 10:35:43] 2025-06-04 14:35:27,441 | INFO     | . initial setup = 2 s
[2025-06-04 10:35:43] 2025-06-04 14:35:27,441 | INFO     | . payload setup = 10 s
[2025-06-04 10:35:43] 2025-06-04 14:35:27,441 | INFO     | . stage-in = 0 s
[2025-06-04 10:35:43] 2025-06-04 14:35:27,441 | INFO     | . payload execution = 6067 s
[2025-06-04 10:35:43] 2025-06-04 14:35:27,441 | INFO     | . stage-out = 0 s
[2025-06-04 10:35:43] 2025-06-04 14:35:27,441 | INFO     | . log creation = 0 s
[2025-06-04 10:35:43] 2025-06-04 14:35:27,441 | INFO     | ..............................
[2025-06-04 10:35:43] 2025-06-04 14:35:27,524 | INFO     | 
[2025-06-04 10:35:43] 2025-06-04 14:35:27,524 | INFO     | job summary report
[2025-06-04 10:35:43] 2025-06-04 14:35:27,524 | INFO     | --------------------------------------------------
[2025-06-04 10:35:43] 2025-06-04 14:35:27,524 | INFO     | PanDA job id: 6678998552
[2025-06-04 10:35:43] 2025-06-04 14:35:27,525 | INFO     | task id: 45006595
[2025-06-04 10:35:43] 2025-06-04 14:35:27,525 | INFO     | errors: (none)
[2025-06-04 10:35:43] 2025-06-04 14:35:27,525 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:35:43] 2025-06-04 14:35:27,525 | INFO     | pilot state: finished 
[2025-06-04 10:35:43] 2025-06-04 14:35:27,525 | INFO     | transexitcode: 0
[2025-06-04 10:35:43] 2025-06-04 14:35:27,525 | INFO     | exeerrorcode: 0
[2025-06-04 10:35:43] 2025-06-04 14:35:27,526 | INFO     | exeerrordiag: 
[2025-06-04 10:35:43] 2025-06-04 14:35:27,526 | INFO     | exitcode: 0
[2025-06-04 10:35:43] 2025-06-04 14:35:27,526 | INFO     | exitmsg: OK
[2025-06-04 10:35:43] 2025-06-04 14:35:27,526 | INFO     | cpuconsumptiontime: 45452 s
[2025-06-04 10:35:43] 2025-06-04 14:35:27,526 | INFO     | nevents: 400
[2025-06-04 10:35:43] 2025-06-04 14:35:27,526 | INFO     | neventsw: 0
[2025-06-04 10:35:43] 2025-06-04 14:35:27,527 | INFO     | pid: 14861
[2025-06-04 10:35:43] 2025-06-04 14:35:27,527 | INFO     | pgrp: 14861
[2025-06-04 10:35:43] 2025-06-04 14:35:27,527 | INFO     | corecount: 8
[2025-06-04 10:35:43] 2025-06-04 14:35:27,527 | INFO     | event service: False
[2025-06-04 10:35:43] 2025-06-04 14:35:27,527 | INFO     | sizes: {0: 2397292, 6: 2397498, 11: 2397526, 6082: 2424155, 6083: 2424154, 6084: 2433335, 6090: 2433449}
[2025-06-04 10:35:43] 2025-06-04 14:35:27,528 | INFO     | --------------------------------------------------
[2025-06-04 10:35:43] 2025-06-04 14:35:27,528 | INFO     | 
[2025-06-04 10:35:43] 2025-06-04 14:35:27,528 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 10:35:43] 2025-06-04 14:35:27,554 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:35:43] 2025-06-04 14:35:27,555 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:35:43] 2025-06-04 14:35:27,555 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:35:43] 2025-06-04 14:35:27,555 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:35:43] 2025-06-04 14:35:27,555 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:35:43] 2025-06-04 14:35:27,556 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:35:43] 2025-06-04 14:35:27,556 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:35:43] 2025-06-04 14:35:27,556 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:35:43] 2025-06-04 14:35:27,556 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:35:43] 2025-06-04 14:35:27,557 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:35:43] 2025-06-04 14:35:27,557 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:35:43] 2025-06-04 14:35:27,557 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:35:43] 2025-06-04 14:35:27,557 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:35:43] 2025-06-04 14:35:27,557 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:35:43] 2025-06-04 14:35:27,558 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:35:43] 2025-06-04 14:35:27,558 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:35:43] 2025-06-04 14:35:27,558 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:35:43] 2025-06-04 14:35:27,558 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:35:43] 2025-06-04 14:35:27,558 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:35:43] 2025-06-04 14:35:27,558 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:35:43] 2025-06-04 14:35:27,559 | INFO     | job 6678998552 has completed (purged errors)
[2025-06-04 10:35:43] 2025-06-04 14:35:27,559 | INFO     | overall cleanup function is called
[2025-06-04 10:35:43] 2025-06-04 14:35:28,567 | INFO     | --- collectZombieJob: --- 10, [14861]
[2025-06-04 10:35:43] 2025-06-04 14:35:28,567 | INFO     | zombie collector waiting for pid 14861
[2025-06-04 10:35:43] 2025-06-04 14:35:28,567 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:35:43] 2025-06-04 14:35:28,568 | INFO     | collected zombie processes
[2025-06-04 10:35:43] 2025-06-04 14:35:28,568 | INFO     | will attempt to kill all subprocesses of pid=14861
[2025-06-04 10:35:43] 2025-06-04 14:35:28,649 | INFO     | process IDs to be killed: [14861] (in reverse order)
[2025-06-04 10:35:43] 2025-06-04 14:35:28,700 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:35:43] 2025-06-04 14:35:28,701 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:35:43] 2025-06-04 14:35:28,706 | INFO     | did not find any defunct processes belonging to 14861
[2025-06-04 10:35:43] 2025-06-04 14:35:28,710 | INFO     | did not find any defunct processes belonging to 14861
[2025-06-04 10:35:43] 2025-06-04 14:35:28,710 | INFO     | ready for new job
[2025-06-04 10:35:43] 2025-06-04 14:35:28,710 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:35:43] 2025-06-04 14:35:28,712 | INFO     | **************************************
[2025-06-04 10:35:43] 2025-06-04 14:35:28,712 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:35:43] 2025-06-04 14:35:28,712 | INFO     | **************************************
[2025-06-04 10:35:43] 2025-06-04 14:35:28,712 | INFO     | 
[2025-06-04 10:35:43] 2025-06-04 14:35:28,712 | INFO     | architecture information:
[2025-06-04 10:35:43] 2025-06-04 14:35:28,713 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:35:43] 2025-06-04 14:35:28,728 | INFO     | cat /etc/os-release:
[2025-06-04 10:35:43] NAME="CentOS Linux"
[2025-06-04 10:35:43] VERSION="7 (Core)"
[2025-06-04 10:35:43] ID="centos"
[2025-06-04 10:35:43] ID_LIKE="rhel fedora"
[2025-06-04 10:35:43] VERSION_ID="7"
[2025-06-04 10:35:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:35:43] ANSI_COLOR="0;31"
[2025-06-04 10:35:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:35:43] HOME_URL="https://www.centos.org/"
[2025-06-04 10:35:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:35:43] 
[2025-06-04 10:35:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:35:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:35:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:35:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:35:43] 
[2025-06-04 10:35:43] 2025-06-04 14:35:28,728 | INFO     | **************************************
[2025-06-04 10:35:43] 2025-06-04 14:35:29,231 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 10:35:43] 2025-06-04 14:35:29,251 | INFO     | sufficient remaining disk space (18642632704 B)
[2025-06-04 10:35:43] 2025-06-04 14:35:29,251 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:35:43] 2025-06-04 14:35:29,252 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:35:43] 2025-06-04 14:35:29,252 | INFO     | update_server=False
[2025-06-04 10:35:43] 2025-06-04 14:35:29,252 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:35:43] 2025-06-04 14:35:29,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:35:43] 2025-06-04 14:35:29,255 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:35:43] 2025-06-04 14:35:29,255 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:35:43] 2025-06-04 14:35:29,255 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:35:43] 2025-06-04 14:35:29,479 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:35:43] 2025-06-04 14:35:29,494 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:35:43] 2025-06-04 14:35:29,494 | INFO     | aborting loop
[2025-06-04 10:35:43] 2025-06-04 14:35:29,746 | INFO     | all data control threads have been joined
[2025-06-04 10:35:43] 2025-06-04 14:35:29,750 | INFO     | all job control threads have been joined
[2025-06-04 10:35:43] 2025-06-04 14:35:30,254 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:35:43] 2025-06-04 14:35:30,258 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:35:43] 2025-06-04 14:35:30,495 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:35:43] 2025-06-04 14:35:30,651 | INFO     | all payload control threads have been joined
[2025-06-04 10:35:43] 2025-06-04 14:35:30,658 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:35:43] 2025-06-04 14:35:30,751 | INFO     | [data] control thread has finished
[2025-06-04 10:35:43] 2025-06-04 14:35:30,756 | INFO     | [job] control thread has finished
[2025-06-04 10:35:43] 2025-06-04 14:35:31,016 | INFO     | [job] validate thread has finished
[2025-06-04 10:35:43] 2025-06-04 14:35:31,137 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:35:43] 2025-06-04 14:35:31,303 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:35:43] 2025-06-04 14:35:31,305 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:35:43] 2025-06-04 14:35:31,317 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:35:43] 2025-06-04 14:35:31,484 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:35:43] 2025-06-04 14:35:31,558 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:35:43] 2025-06-04 14:35:31,606 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:35:43] 2025-06-04 14:35:31,657 | INFO     | [payload] control thread has finished
[2025-06-04 10:35:43] 2025-06-04 14:35:32,057 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:35:43] 2025-06-04 14:35:36,063 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:35:43] 2025-06-04 14:35:37,971 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139974183970624)>', '<ExcThread(monitor, started 139973420365568)>']
[2025-06-04 10:35:43] 2025-06-04 14:35:38,298 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:35:43] 2025-06-04 14:35:38,299 | INFO     | [monitor] control thread has ended
[2025-06-04 10:35:43] 2025-06-04 14:35:42,984 | INFO     | all workflow threads have been joined
[2025-06-04 10:35:43] 2025-06-04 14:35:42,984 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:35:43] 2025-06-04 14:35:42,995 | INFO     | traces error code: 0
[2025-06-04 10:35:43] 2025-06-04 14:35:42,996 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:35:43] 2025-06-04 14:35:43,099 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:35:43] 2025-06-04 14:35:43,104 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:35:43] 2025-06-04 14:35:43,109 [wrapper] pilotpid: 8391
[2025-06-04 10:35:43] 2025-06-04 14:35:43,113 [wrapper] Pilot exit status: 0
[2025-06-04 10:35:43] 2025-06-04 14:35:43,134 [wrapper] pandaids: 6678998552
[2025-06-04 10:35:43] 2025-06-04 14:35:43,176 [wrapper] cleanup supervisor_pilot  8336 8392
[2025-06-04 10:35:43] 2025-06-04 14:35:43,181 [wrapper] Test setup, not cleaning
[2025-06-04 10:35:43] 2025-06-04 14:35:43,185 [wrapper] apfmon messages muted
[2025-06-04 10:35:43] 2025-06-04 14:35:43,189 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:35:43] 2025-06-04 14:35:43,193 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:35:43]  *** Error codes and diagnostics ***
[2025-06-04 10:35:43]     "exeErrorCode": 0,
[2025-06-04 10:35:43]     "exeErrorDiag": "",
[2025-06-04 10:35:43]     "pilotErrorCode": 0,
[2025-06-04 10:35:43]     "pilotErrorDiag": "",
[2025-06-04 10:35:43]  *** Listing of results directory ***
[2025-06-04 10:35:43] total 390784
[2025-06-04 10:35:43] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 04:31 pilot3.tar.gz
[2025-06-04 10:35:43] -rwx------ 1 boincer umatlas     37140 Jun  4 04:38 runpilot2-wrapper.sh
[2025-06-04 10:35:43] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 04:38 queuedata.json
[2025-06-04 10:35:43] -rw-r--r-- 1 boincer umatlas       100 Jun  4 08:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:35:43] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 08:53 run_atlas
[2025-06-04 10:35:43] -rw-r--r-- 1 boincer umatlas       105 Jun  4 08:53 job.xml
[2025-06-04 10:35:43] -rw-r--r-- 2 boincer umatlas 215319735 Jun  4 08:53 EVNT.45006593._001308.pool.root.1
[2025-06-04 10:35:43] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:53 start_atlas.sh
[2025-06-04 10:35:43] drwxrwx--x 2 boincer umatlas      4096 Jun  4 08:53 shared
[2025-06-04 10:35:43] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 08:53 input.tar.gz
[2025-06-04 10:35:43] -rw-r--r-- 1 boincer umatlas         0 Jun  4 08:53 boinc_lockfile
[2025-06-04 10:35:43] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 08:53 pandaJob.out
[2025-06-04 10:35:43] -rw------- 1 boincer umatlas    986811 Jun  4 08:53 agis_schedconf.cvmfs.json
[2025-06-04 10:35:43] -rw------- 1 boincer umatlas   1598969 Jun  4 08:53 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:35:43] drwx------ 4 boincer umatlas      4096 Jun  4 08:53 pilot3
[2025-06-04 10:35:43] -rw-r--r-- 1 boincer umatlas      5824 Jun  4 10:28 init_data.xml
[2025-06-04 10:35:43] -rw------- 1 boincer umatlas 179229228 Jun  4 10:34 HITS.45006595._055758.pool.root.1
[2025-06-04 10:35:43] -rw------- 1 boincer umatlas        95 Jun  4 10:35 pilot_heartbeat.json
[2025-06-04 10:35:43] -rw-r--r-- 1 boincer umatlas       529 Jun  4 10:35 boinc_task_state.xml
[2025-06-04 10:35:43] -rw------- 1 boincer umatlas      1061 Jun  4 10:35 memory_monitor_summary.json
[2025-06-04 10:35:43] -rw------- 1 boincer umatlas    323394 Jun  4 10:35 log.45006595._055758.job.log.tgz.1
[2025-06-04 10:35:43] -rw------- 1 boincer umatlas      7743 Jun  4 10:35 heartbeat.json
[2025-06-04 10:35:43] -rw-r--r-- 1 boincer umatlas        27 Jun  4 10:35 wrapper_checkpoint.txt
[2025-06-04 10:35:43] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 10:35 boinc_mmap_file
[2025-06-04 10:35:43] -rw------- 1 boincer umatlas      4353 Jun  4 10:35 pilotlog.txt
[2025-06-04 10:35:43] -rw------- 1 boincer umatlas    567973 Jun  4 10:35 log.45006595._055758.job.log.1
[2025-06-04 10:35:43] -rw------- 1 boincer umatlas       357 Jun  4 10:35 output.list
[2025-06-04 10:35:43] -rw-r--r-- 1 boincer umatlas       620 Jun  4 10:35 runtime_log
[2025-06-04 10:35:43] -rw------- 1 boincer umatlas    911360 Jun  4 10:35 result.tar.gz
[2025-06-04 10:35:43] -rw------- 1 boincer umatlas       657 Jun  4 10:35 ym8NDmioyg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmSyaKDmZY56vn.diag
[2025-06-04 10:35:43] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 10:35 runtime_log.err
[2025-06-04 10:35:43] -rw-r--r-- 1 boincer umatlas     20754 Jun  4 10:35 stderr.txt
[2025-06-04 10:35:43] HITS file was successfully produced:
[2025-06-04 10:35:43] -rw------- 1 boincer umatlas 179229228 Jun  4 10:34 shared/HITS.pool.root.1
[2025-06-04 10:35:43]  *** Contents of shared directory: ***
[2025-06-04 10:35:43] total 386720
[2025-06-04 10:35:43] -rw-r--r-- 2 boincer umatlas 215319735 Jun  4 08:53 ATLAS.root_0
[2025-06-04 10:35:43] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:53 start_atlas.sh
[2025-06-04 10:35:43] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 08:53 input.tar.gz
[2025-06-04 10:35:43] -rw------- 1 boincer umatlas 179229228 Jun  4 10:34 HITS.pool.root.1
[2025-06-04 10:35:43] -rw------- 1 boincer umatlas    911360 Jun  4 10:35 result.tar.gz
10:35:45 (4805): run_atlas exited; CPU time 45413.093431
10:35:45 (4805): called boinc_finish(0)

</stderr_txt>
]]>

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