Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:44:47 (3638922): wrapper (7.7.26015): starting
08:44:47 (3638922): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:44:47] Arguments: --nthreads 8
[2025-06-04 08:44:47] Threads: 8
[2025-06-04 08:44:47] Checking for CVMFS
[2025-06-04 08:44:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:44:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:44:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:44:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:44:47] 2.12.6.0 9081 31517 554204 146780 2 458 16547613 32935936 14268 16776704 0 179536044 99.654 159307959 25920 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:44:47] CVMFS is ok
[2025-06-04 08:44:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:44:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:44:47] Further information can be found at the LHC@home message board.
[2025-06-04 08:44:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:44:47] Checking for apptainer binary...
[2025-06-04 08:44:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:44:47] Running /usr/bin/apptainer --version
[2025-06-04 08:44:47] apptainer version 1.4.1-1.el9
[2025-06-04 08:44:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:44:47] c6-12-29-3.aglt2.org
[2025-06-04 08:44:47] apptainer works
[2025-06-04 08:44:47] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:44:47] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:44:47] Starting ATLAS job with PandaID=6678313350
[2025-06-04 08:44:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:52:06]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:52:06]  status_code=0
[2025-06-04 09:52:06]  storage_token=
[2025-06-04 09:52:06]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678313350/log.45006595._052444.job.log.tgz.1
[2025-06-04 09:52:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/a6/log.45006595._052444.job.log.tgz.1
[2025-06-04 09:52:06]  workdir=None
[2025-06-04 09:52:06] ]
[2025-06-04 09:52:06] 2025-06-04 13:51:45,212 | INFO     | transferring file log.45006595._052444.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678313350/log.45006595._052444.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:52:06] 2025-06-04 13:51:45,212 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678313350/log.45006595._052444.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._052444.job
[2025-06-04 09:52:06] 2025-06-04 13:51:45,230 | INFO     | adding to output.list: log.45006595._052444.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/a6/log.45006595._052444.job.log.tg
[2025-06-04 09:52:06] 2025-06-04 13:51:45,230 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:52:06] 2025-06-04 13:51:45,231 | INFO     | summary of transferred files:
[2025-06-04 09:52:06] 2025-06-04 13:51:45,231 | INFO     |  -- lfn=log.45006595._052444.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:52:06] 2025-06-04 13:51:45,231 | INFO     | stage-out finished correctly
[2025-06-04 09:52:06] 2025-06-04 13:51:46,076 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:52:06] 2025-06-04 13:51:48,150 | INFO     | job 6678313350 has state=finished
[2025-06-04 09:52:06] 2025-06-04 13:51:48,150 | INFO     | preparing for final server update for job 6678313350 in state='finished'
[2025-06-04 09:52:06] 2025-06-04 13:51:48,193 | INFO     | PID=3642548 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 09:52:06] 2025-06-04 13:51:48,193 | INFO     | .. there are 22 such processes running
[2025-06-04 09:52:06] 2025-06-04 13:51:48,209 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 09:52:06] 2025-06-04 13:51:48,209 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:52:06] 2025-06-04 13:51:48,209 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:52:06] 2025-06-04 13:51:48,209 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:52:06] 2025-06-04 13:51:48,209 | INFO     | job 6678313350 has finished - writing final server update
[2025-06-04 09:52:06] 2025-06-04 13:51:48,210 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:52:06] 2025-06-04 13:51:48,227 | INFO     | executing command: lscpu
[2025-06-04 09:52:06] 2025-06-04 13:51:48,276 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:52:06] 2025-06-04 13:51:50,383 | WARNING  | process 3649495 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 09:52:06] 2025-06-04 13:51:50,383 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678313350/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:52:06] 2025-06-04 13:51:50,384 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678313350/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:52:06] 2025-06-04 13:51:50,385 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3463986 B
[2025-06-04 09:52:06] 2025-06-04 13:51:50,385 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15544 B
[2025-06-04 09:52:06] 2025-06-04 13:51:50,385 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 09:52:06] 2025-06-04 13:51:51,822 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:52:06] 2025-06-04 13:51:51,824 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678313350/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:52:06] 2025-06-04 13:51:51,826 | INFO     | extracted standard info from prmon json
[2025-06-04 09:52:06] 2025-06-04 13:51:51,831 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:52:06] 2025-06-04 13:51:51,831 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:52:06] 2025-06-04 13:51:51,832 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:52:06] 2025-06-04 13:51:51,832 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:52:06] 2025-06-04 13:51:51,834 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:52:06] 2025-06-04 13:51:51,835 | INFO     | sum of square deviations: 63666310.0
[2025-06-04 09:52:06] 2025-06-04 13:51:51,835 | INFO     | sum of deviations: 5342350841.999999
[2025-06-04 09:52:06] 2025-06-04 13:51:51,835 | INFO     | mean x: 1749043194.0
[2025-06-04 09:52:06] 2025-06-04 13:51:51,835 | INFO     | mean y: 2185282.0169491526
[2025-06-04 09:52:06] 2025-06-04 13:51:51,835 | INFO     | -- intersect: -146763072201.26218
[2025-06-04 09:52:06] 2025-06-04 13:51:51,835 | INFO     | intersect: -146763072201.26218
[2025-06-04 09:52:06] 2025-06-04 13:51:51,836 | INFO     | chi2: 0.8069196298520191
[2025-06-04 09:52:06] 2025-06-04 13:51:51,836 | INFO     | -- intersect: -146763072201.26218
[2025-06-04 09:52:06] 2025-06-04 13:51:51,836 | INFO     | current memory leak: 83.91 B/s (using 59 data points, chi2=0.81)
[2025-06-04 09:52:06] 2025-06-04 13:51:51,837 | INFO     | ..............................
[2025-06-04 09:52:06] 2025-06-04 13:51:51,837 | INFO     | . Timing measurements:
[2025-06-04 09:52:06] 2025-06-04 13:51:51,837 | INFO     | . get job = 0 s
[2025-06-04 09:52:06] 2025-06-04 13:51:51,837 | INFO     | . initial setup = 2 s
[2025-06-04 09:52:06] 2025-06-04 13:51:51,837 | INFO     | . payload setup = 5 s
[2025-06-04 09:52:06] 2025-06-04 13:51:51,837 | INFO     | . stage-in = 0 s
[2025-06-04 09:52:06] 2025-06-04 13:51:51,837 | INFO     | . payload execution = 3984 s
[2025-06-04 09:52:06] 2025-06-04 13:51:51,837 | INFO     | . stage-out = 0 s
[2025-06-04 09:52:06] 2025-06-04 13:51:51,837 | INFO     | . log creation = 0 s
[2025-06-04 09:52:06] 2025-06-04 13:51:51,837 | INFO     | ..............................
[2025-06-04 09:52:06] 2025-06-04 13:51:51,862 | INFO     | sufficient remaining disk space (95181340672 B)
[2025-06-04 09:52:06] 2025-06-04 13:51:51,877 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 09:52:06] 2025-06-04 13:51:51,929 | INFO     | 
[2025-06-04 09:52:06] 2025-06-04 13:51:51,930 | INFO     | job summary report
[2025-06-04 09:52:06] 2025-06-04 13:51:51,930 | INFO     | --------------------------------------------------
[2025-06-04 09:52:06] 2025-06-04 13:51:51,930 | INFO     | PanDA job id: 6678313350
[2025-06-04 09:52:06] 2025-06-04 13:51:51,931 | INFO     | task id: 45006595
[2025-06-04 09:52:06] 2025-06-04 13:51:51,931 | INFO     | errors: (none)
[2025-06-04 09:52:06] 2025-06-04 13:51:51,931 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:52:06] 2025-06-04 13:51:51,931 | INFO     | pilot state: finished 
[2025-06-04 09:52:06] 2025-06-04 13:51:51,931 | INFO     | transexitcode: 0
[2025-06-04 09:52:06] 2025-06-04 13:51:51,932 | INFO     | exeerrorcode: 0
[2025-06-04 09:52:06] 2025-06-04 13:51:51,932 | INFO     | exeerrordiag: 
[2025-06-04 09:52:06] 2025-06-04 13:51:51,932 | INFO     | exitcode: 0
[2025-06-04 09:52:06] 2025-06-04 13:51:51,932 | INFO     | exitmsg: OK
[2025-06-04 09:52:06] 2025-06-04 13:51:51,933 | INFO     | cpuconsumptiontime: 26702 s
[2025-06-04 09:52:06] 2025-06-04 13:51:51,933 | INFO     | nevents: 400
[2025-06-04 09:52:06] 2025-06-04 13:51:51,933 | INFO     | neventsw: 0
[2025-06-04 09:52:06] 2025-06-04 13:51:51,933 | INFO     | pid: 3649495
[2025-06-04 09:52:06] 2025-06-04 13:51:51,933 | INFO     | pgrp: 3649495
[2025-06-04 09:52:06] 2025-06-04 13:51:51,934 | INFO     | corecount: 8
[2025-06-04 09:52:06] 2025-06-04 13:51:51,934 | INFO     | event service: False
[2025-06-04 09:52:06] 2025-06-04 13:51:51,934 | INFO     | sizes: {0: 2397170, 1: 2397369, 4: 2397575, 12: 2397603, 3993: 2423400, 3994: 2432341, 3995: 2432525, 4001: 2432695}
[2025-06-04 09:52:06] 2025-06-04 13:51:51,934 | INFO     | --------------------------------------------------
[2025-06-04 09:52:06] 2025-06-04 13:51:51,935 | INFO     | 
[2025-06-04 09:52:06] 2025-06-04 13:51:51,935 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 09:52:06] 2025-06-04 13:51:51,940 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6678313350: 3777059 B (within 2537553920 B limit)
[2025-06-04 09:52:06] 2025-06-04 13:51:51,941 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6678313350/HITS.45006595._052444.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 09:52:06] 2025-06-04 13:51:51,942 | INFO     | total size of present files: 0 B (workdir size: 3777059 B)
[2025-06-04 09:52:06] 2025-06-04 13:51:51,942 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6678313350/HITS.45006595._052444.pool.root.1 since it does not exist
[2025-06-04 09:52:06] 2025-06-04 13:51:51,955 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:52:06] 2025-06-04 13:51:51,955 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:52:06] 2025-06-04 13:51:51,955 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:52:06] 2025-06-04 13:51:51,955 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:52:06] 2025-06-04 13:51:51,955 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:52:06] 2025-06-04 13:51:51,955 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:52:06] 2025-06-04 13:51:51,956 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:52:06] 2025-06-04 13:51:51,956 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:52:06] 2025-06-04 13:51:51,956 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:52:06] 2025-06-04 13:51:51,956 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:52:06] 2025-06-04 13:51:51,956 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:52:06] 2025-06-04 13:51:51,956 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:52:06] 2025-06-04 13:51:51,956 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:52:06] 2025-06-04 13:51:51,956 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:52:06] 2025-06-04 13:51:51,956 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:52:06] 2025-06-04 13:51:51,957 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:52:06] 2025-06-04 13:51:51,957 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:52:06] 2025-06-04 13:51:51,957 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:52:06] 2025-06-04 13:51:51,957 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:52:06] 2025-06-04 13:51:51,957 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:52:06] 2025-06-04 13:51:51,957 | INFO     | job 6678313350 has completed (purged errors)
[2025-06-04 09:52:06] 2025-06-04 13:51:51,957 | INFO     | overall cleanup function is called
[2025-06-04 09:52:06] 2025-06-04 13:51:52,161 | INFO     | number of running child processes to parent process 3649495: 1
[2025-06-04 09:52:06] 2025-06-04 13:51:52,162 | INFO     | maximum number of monitored processes: 6
[2025-06-04 09:52:06] 2025-06-04 13:51:52,162 | INFO     | aborting job monitoring since job object (job id=6678313350) has expired
[2025-06-04 09:52:06] 2025-06-04 13:51:52,966 | INFO     | --- collectZombieJob: --- 10, [3649495]
[2025-06-04 09:52:06] 2025-06-04 13:51:52,966 | INFO     | zombie collector waiting for pid 3649495
[2025-06-04 09:52:06] 2025-06-04 13:51:52,967 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:52:06] 2025-06-04 13:51:52,967 | INFO     | collected zombie processes
[2025-06-04 09:52:06] 2025-06-04 13:51:52,967 | INFO     | will attempt to kill all subprocesses of pid=3649495
[2025-06-04 09:52:06] 2025-06-04 13:51:53,285 | INFO     | process IDs to be killed: [3649495] (in reverse order)
[2025-06-04 09:52:06] 2025-06-04 13:51:53,385 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:52:06] 2025-06-04 13:51:53,385 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:52:06] 2025-06-04 13:51:53,398 | INFO     | did not find any defunct processes belonging to 3649495
[2025-06-04 09:52:06] 2025-06-04 13:51:53,411 | INFO     | did not find any defunct processes belonging to 3649495
[2025-06-04 09:52:06] 2025-06-04 13:51:53,411 | INFO     | ready for new job
[2025-06-04 09:52:06] 2025-06-04 13:51:53,412 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:52:06] 2025-06-04 13:51:53,414 | INFO     | **************************************
[2025-06-04 09:52:06] 2025-06-04 13:51:53,414 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:52:06] 2025-06-04 13:51:53,414 | INFO     | **************************************
[2025-06-04 09:52:06] 2025-06-04 13:51:53,414 | INFO     | 
[2025-06-04 09:52:06] 2025-06-04 13:51:53,431 | INFO     | architecture information:
[2025-06-04 09:52:06] 2025-06-04 13:51:53,431 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:52:06] 2025-06-04 13:51:53,449 | INFO     | cat /etc/os-release:
[2025-06-04 09:52:06] NAME="CentOS Linux"
[2025-06-04 09:52:06] VERSION="7 (Core)"
[2025-06-04 09:52:06] ID="centos"
[2025-06-04 09:52:06] ID_LIKE="rhel fedora"
[2025-06-04 09:52:06] VERSION_ID="7"
[2025-06-04 09:52:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:52:06] ANSI_COLOR="0;31"
[2025-06-04 09:52:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:52:06] HOME_URL="https://www.centos.org/"
[2025-06-04 09:52:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:52:06] 
[2025-06-04 09:52:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:52:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:52:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:52:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:52:06] 
[2025-06-04 09:52:06] 2025-06-04 13:51:53,449 | INFO     | **************************************
[2025-06-04 09:52:06] 2025-06-04 13:51:53,951 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 09:52:06] 2025-06-04 13:51:53,966 | INFO     | sufficient remaining disk space (95185534976 B)
[2025-06-04 09:52:06] 2025-06-04 13:51:53,966 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:52:06] 2025-06-04 13:51:53,966 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:52:06] 2025-06-04 13:51:53,967 | INFO     | update_server=False
[2025-06-04 09:52:06] 2025-06-04 13:51:53,967 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:52:06] 2025-06-04 13:51:53,967 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:52:06] 2025-06-04 13:51:53,967 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:52:06] 2025-06-04 13:51:53,967 | INFO     | aborting loop
[2025-06-04 09:52:06] 2025-06-04 13:51:54,203 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:52:06] 2025-06-04 13:51:54,203 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:52:06] 2025-06-04 13:51:54,203 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:52:06] 2025-06-04 13:51:54,294 | INFO     | all data control threads have been joined
[2025-06-04 09:52:06] 2025-06-04 13:51:54,387 | INFO     | all payload control threads have been joined
[2025-06-04 09:52:06] 2025-06-04 13:51:54,972 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:52:06] 2025-06-04 13:51:54,972 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:52:06] 2025-06-04 13:51:55,111 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:52:06] 2025-06-04 13:51:55,191 | INFO     | all job control threads have been joined
[2025-06-04 09:52:06] 2025-06-04 13:51:55,300 | INFO     | [data] control thread has finished
[2025-06-04 09:52:06] 2025-06-04 13:51:55,358 | INFO     | [job] validate thread has finished
[2025-06-04 09:52:06] 2025-06-04 13:51:55,392 | INFO     | [payload] control thread has finished
[2025-06-04 09:52:06] 2025-06-04 13:51:55,468 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:52:06] 2025-06-04 13:51:55,607 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:52:06] 2025-06-04 13:51:55,784 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:52:06] 2025-06-04 13:51:55,917 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:52:06] 2025-06-04 13:51:55,971 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:52:06] 2025-06-04 13:51:56,025 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:52:06] 2025-06-04 13:51:56,195 | INFO     | [job] control thread has finished
[2025-06-04 09:52:06] 2025-06-04 13:51:56,218 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:52:06] 2025-06-04 13:51:56,673 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:52:06] 2025-06-04 13:51:56,936 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:52:06] 2025-06-04 13:51:57,941 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:52:06] 2025-06-04 13:52:00,678 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:52:06] 2025-06-04 13:52:00,938 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140095625725760)>', '<ExcThread(monitor, started 140094920980224)>']
[2025-06-04 09:52:06] 2025-06-04 13:52:01,239 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:52:06] 2025-06-04 13:52:01,239 | INFO     | [monitor] control thread has ended
[2025-06-04 09:52:06] 2025-06-04 13:52:05,964 | INFO     | all workflow threads have been joined
[2025-06-04 09:52:06] 2025-06-04 13:52:05,965 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:52:06] 2025-06-04 13:52:05,965 | INFO     | traces error code: 0
[2025-06-04 09:52:06] 2025-06-04 13:52:05,965 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:52:06] 2025-06-04 13:52:06,107 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:52:06] 2025-06-04 13:52:06,109 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:52:06] 2025-06-04 13:52:06,112 [wrapper] pilotpid: 3642548
[2025-06-04 09:52:06] 2025-06-04 13:52:06,114 [wrapper] Pilot exit status: 0
[2025-06-04 09:52:06] 2025-06-04 13:52:06,121 [wrapper] pandaids: 6678313350
[2025-06-04 09:52:06] 2025-06-04 13:52:06,192 [wrapper] cleanup supervisor_pilot 3822251 3642549
[2025-06-04 09:52:06] 2025-06-04 13:52:06,195 [wrapper] Test setup, not cleaning
[2025-06-04 09:52:06] 2025-06-04 13:52:06,198 [wrapper] apfmon messages muted
[2025-06-04 09:52:06] 2025-06-04 13:52:06,201 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:52:06] 2025-06-04 13:52:06,203 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:52:06]  *** Error codes and diagnostics ***
[2025-06-04 09:52:06]     "exeErrorCode": 0,
[2025-06-04 09:52:06]     "exeErrorDiag": "",
[2025-06-04 09:52:06]     "pilotErrorCode": 0,
[2025-06-04 09:52:06]     "pilotErrorDiag": "",
[2025-06-04 09:52:06]  *** Listing of results directory ***
[2025-06-04 09:52:06] total 391724
[2025-06-04 09:52:06] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 00:04 pilot3.tar.gz
[2025-06-04 09:52:06] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 00:17 queuedata.json
[2025-06-04 09:52:06] -rwx------. 1 boincer umatlas     37140 Jun  4 00:18 runpilot2-wrapper.sh
[2025-06-04 09:52:06] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:52:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:44 run_atlas
[2025-06-04 09:52:06] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:44 job.xml
[2025-06-04 09:52:06] -rw-r--r--. 2 boincer umatlas 213896017 Jun  4 08:44 EVNT.45006593._002100.pool.root.1
[2025-06-04 09:52:06] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:44 start_atlas.sh
[2025-06-04 09:52:06] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:44 shared
[2025-06-04 09:52:06] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 08:44 input.tar.gz
[2025-06-04 09:52:06] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:44 boinc_lockfile
[2025-06-04 09:52:06] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 08:44 pandaJob.out
[2025-06-04 09:52:06] -rw-------. 1 boincer umatlas    986811 Jun  4 08:44 agis_schedconf.cvmfs.json
[2025-06-04 09:52:06] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:44 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:52:06] drwx------. 4 boincer umatlas      4096 Jun  4 08:44 pilot3
[2025-06-04 09:52:06] -rw-r--r--. 1 boincer umatlas      6859 Jun  4 09:46 init_data.xml
[2025-06-04 09:52:06] -rw-------. 1 boincer umatlas 181988028 Jun  4 09:51 HITS.45006595._052444.pool.root.1
[2025-06-04 09:52:06] -rw-r--r--. 1 boincer umatlas       530 Jun  4 09:51 boinc_task_state.xml
[2025-06-04 09:52:06] -rw-------. 1 boincer umatlas        95 Jun  4 09:51 pilot_heartbeat.json
[2025-06-04 09:52:06] -rw-------. 1 boincer umatlas      1031 Jun  4 09:51 memory_monitor_summary.json
[2025-06-04 09:52:06] -rw-------. 1 boincer umatlas    305178 Jun  4 09:51 log.45006595._052444.job.log.tgz.1
[2025-06-04 09:52:06] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:51 boinc_mmap_file
[2025-06-04 09:52:06] -rw-r--r--. 1 boincer umatlas        27 Jun  4 09:51 wrapper_checkpoint.txt
[2025-06-04 09:52:06] -rw-------. 1 boincer umatlas      7716 Jun  4 09:51 heartbeat.json
[2025-06-04 09:52:06] -rw-------. 1 boincer umatlas      4353 Jun  4 09:52 pilotlog.txt
[2025-06-04 09:52:06] -rw-------. 1 boincer umatlas    400857 Jun  4 09:52 log.45006595._052444.job.log.1
[2025-06-04 09:52:06] -rw-------. 1 boincer umatlas       357 Jun  4 09:52 output.list
[2025-06-04 09:52:06] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:52 runtime_log
[2025-06-04 09:52:06] -rw-------. 1 boincer umatlas    727040 Jun  4 09:52 result.tar.gz
[2025-06-04 09:52:06] -rw-r--r--. 1 boincer umatlas      8669 Jun  4 09:52 runtime_log.err
[2025-06-04 09:52:06] -rw-------. 1 boincer umatlas       653 Jun  4 09:52 97eLDmmlug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4BnKDmsjXyEm.diag
[2025-06-04 09:52:06] -rw-r--r--. 1 boincer umatlas     22408 Jun  4 09:52 stderr.txt
[2025-06-04 09:52:06] HITS file was successfully produced:
[2025-06-04 09:52:06] -rw-------. 1 boincer umatlas 181988028 Jun  4 09:51 shared/HITS.pool.root.1
[2025-06-04 09:52:06]  *** Contents of shared directory: ***
[2025-06-04 09:52:06] total 387840
[2025-06-04 09:52:06] -rw-r--r--. 2 boincer umatlas 213896017 Jun  4 08:44 ATLAS.root_0
[2025-06-04 09:52:06] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:44 start_atlas.sh
[2025-06-04 09:52:06] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 08:44 input.tar.gz
[2025-06-04 09:52:06] -rw-------. 1 boincer umatlas 181988028 Jun  4 09:51 HITS.pool.root.1
[2025-06-04 09:52:06] -rw-------. 1 boincer umatlas    727040 Jun  4 09:52 result.tar.gz
09:52:07 (3638922): run_atlas exited; CPU time 26868.469514
09:52:07 (3638922): called boinc_finish(0)

</stderr_txt>
]]>

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