Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:30:25 (197480): wrapper (7.7.26015): starting
09:30:25 (197480): wrapper: running run_atlas (--nthreads 9)
[2025-06-04 09:30:25] Arguments: --nthreads 9
[2025-06-04 09:30:25] Threads: 9
[2025-06-04 09:30:25] Checking for CVMFS
[2025-06-04 09:30:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:30:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:30:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:30:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:30:26] 2.11.2.0 6612 28845 237320 146781 2 63 16966015 18432001 8160 130560 0 65838119 99.511 66283135 28133 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 09:30:26] CVMFS is ok
[2025-06-04 09:30:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:30:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:30:26] Further information can be found at the LHC@home message board.
[2025-06-04 09:30:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:30:26] Checking for apptainer binary...
[2025-06-04 09:30:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:30:26] Running /usr/bin/apptainer --version
[2025-06-04 09:30:26] apptainer version 1.3.2-1.el7
[2025-06-04 09:30:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:30:27] c-210-31-1.aglt2.org
[2025-06-04 09:30:27] apptainer works
[2025-06-04 09:30:27] Set ATHENA_PROC_NUMBER=9
[2025-06-04 09:30:27] Set ATHENA_CORE_NUMBER=9
[2025-06-04 09:30:27] Starting ATLAS job with PandaID=6679206122
[2025-06-04 09:30:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:59:49]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:59:49]  protocol_id=None
[2025-06-04 10:59:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:59:49]  replicas=None
[2025-06-04 10:59:49]  scope=mc23_13p6TeV
[2025-06-04 10:59:49]  status=None
[2025-06-04 10:59:49]  status_code=0
[2025-06-04 10:59:49]  storage_token=
[2025-06-04 10:59:49]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6679206122/log.45006595._055996.job.log.tgz.1
[2025-06-04 10:59:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9c/af/log.45006595._055996.job.log.tgz.1
[2025-06-04 10:59:49]  workdir=None
[2025-06-04 10:59:49] ]
[2025-06-04 10:59:49] 2025-06-04 14:59:16,397 | INFO     | transferring file log.45006595._055996.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6679206122/log.45006595._055996.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:59:49] 2025-06-04 14:59:16,397 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6679206122/log.45006595._055996.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._055996.job
[2025-06-04 10:59:49] 2025-06-04 14:59:16,416 | INFO     | adding to output.list: log.45006595._055996.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9c/af/log.45006595._055996.job.log.tg
[2025-06-04 10:59:49] 2025-06-04 14:59:16,417 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:59:49] 2025-06-04 14:59:16,417 | INFO     | summary of transferred files:
[2025-06-04 10:59:49] 2025-06-04 14:59:16,418 | INFO     |  -- lfn=log.45006595._055996.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:59:49] 2025-06-04 14:59:16,418 | INFO     | stage-out finished correctly
[2025-06-04 10:59:49] 2025-06-04 14:59:16,748 | INFO     | PID=201073 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 10:59:49] 2025-06-04 14:59:16,748 | INFO     | .. there are 10 such processes running
[2025-06-04 10:59:49] 2025-06-04 14:59:17,689 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:59:49] 2025-06-04 14:59:19,777 | WARNING  | process 207800 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 10:59:49] 2025-06-04 14:59:19,777 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6679206122/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:59:49] 2025-06-04 14:59:19,942 | INFO     | job 6679206122 has state=finished
[2025-06-04 10:59:49] 2025-06-04 14:59:19,945 | INFO     | preparing for final server update for job 6679206122 in state='finished'
[2025-06-04 10:59:49] 2025-06-04 14:59:19,946 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:59:49] 2025-06-04 14:59:19,946 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:59:49] 2025-06-04 14:59:19,947 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:59:49] 2025-06-04 14:59:19,947 | INFO     | job 6679206122 has finished - writing final server update
[2025-06-04 10:59:49] 2025-06-04 14:59:19,947 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:59:49] 2025-06-04 14:59:19,951 | INFO     | executing command: lscpu
[2025-06-04 10:59:49] 2025-06-04 14:59:19,985 | INFO     | number of running child processes to parent process 207800: 1
[2025-06-04 10:59:49] 2025-06-04 14:59:19,985 | INFO     | maximum number of monitored processes: 6
[2025-06-04 10:59:49] 2025-06-04 14:59:20,014 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:59:49] 2025-06-04 14:59:22,488 | INFO     | monitor loop #395: job 0:6679206122 is in state 'finished'
[2025-06-04 10:59:49] 2025-06-04 14:59:22,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:59:49] 2025-06-04 14:59:24,992 | INFO     | monitor loop #396: job 0:6679206122 is in state 'finished'
[2025-06-04 10:59:49] 2025-06-04 14:59:24,993 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:59:49] 2025-06-04 14:59:27,500 | INFO     | monitor loop #397: job 0:6679206122 is in state 'finished'
[2025-06-04 10:59:49] 2025-06-04 14:59:27,500 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:59:49] 2025-06-04 14:59:28,374 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 10:59:49] 2025-06-04 14:59:28,375 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6679206122/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:59:49] 2025-06-04 14:59:28,375 | INFO     | extracted standard info from prmon json
[2025-06-04 10:59:49] 2025-06-04 14:59:28,375 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:59:49] 2025-06-04 14:59:28,375 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:59:49] 2025-06-04 14:59:28,376 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:59:49] 2025-06-04 14:59:28,376 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:59:49] 2025-06-04 14:59:28,379 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:59:49] 2025-06-04 14:59:28,380 | INFO     | sum of square deviations: 158737860.0
[2025-06-04 10:59:49] 2025-06-04 14:59:28,380 | INFO     | sum of deviations: -7730559219.0
[2025-06-04 10:59:49] 2025-06-04 14:59:28,381 | INFO     | mean x: 1749046611.5
[2025-06-04 10:59:49] 2025-06-04 14:59:28,381 | INFO     | mean y: 2640465.25
[2025-06-04 10:59:49] 2025-06-04 14:59:28,381 | INFO     | -- intersect: 85181490721.84308
[2025-06-04 10:59:49] 2025-06-04 14:59:28,381 | INFO     | intersect: 85181490721.84308
[2025-06-04 10:59:49] 2025-06-04 14:59:28,381 | INFO     | chi2: 0.0477120271741755
[2025-06-04 10:59:49] 2025-06-04 14:59:28,381 | INFO     | -- intersect: 85181490721.84308
[2025-06-04 10:59:49] 2025-06-04 14:59:28,381 | INFO     | current memory leak: -48.70 B/s (using 80 data points, chi2=0.05)
[2025-06-04 10:59:49] 2025-06-04 14:59:28,382 | INFO     | ..............................
[2025-06-04 10:59:49] 2025-06-04 14:59:28,382 | INFO     | . Timing measurements:
[2025-06-04 10:59:49] 2025-06-04 14:59:28,382 | INFO     | . get job = 0 s
[2025-06-04 10:59:49] 2025-06-04 14:59:28,382 | INFO     | . initial setup = 2 s
[2025-06-04 10:59:49] 2025-06-04 14:59:28,382 | INFO     | . payload setup = 18 s
[2025-06-04 10:59:49] 2025-06-04 14:59:28,383 | INFO     | . stage-in = 0 s
[2025-06-04 10:59:49] 2025-06-04 14:59:28,383 | INFO     | . payload execution = 5268 s
[2025-06-04 10:59:49] 2025-06-04 14:59:28,383 | INFO     | . stage-out = 0 s
[2025-06-04 10:59:49] 2025-06-04 14:59:28,383 | INFO     | . log creation = 0 s
[2025-06-04 10:59:49] 2025-06-04 14:59:28,383 | INFO     | ..............................
[2025-06-04 10:59:49] 2025-06-04 14:59:28,471 | INFO     | 
[2025-06-04 10:59:49] 2025-06-04 14:59:28,471 | INFO     | job summary report
[2025-06-04 10:59:49] 2025-06-04 14:59:28,471 | INFO     | --------------------------------------------------
[2025-06-04 10:59:49] 2025-06-04 14:59:28,471 | INFO     | PanDA job id: 6679206122
[2025-06-04 10:59:49] 2025-06-04 14:59:28,471 | INFO     | task id: 45006595
[2025-06-04 10:59:49] 2025-06-04 14:59:28,471 | INFO     | errors: (none)
[2025-06-04 10:59:49] 2025-06-04 14:59:28,471 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:59:49] 2025-06-04 14:59:28,471 | INFO     | pilot state: finished 
[2025-06-04 10:59:49] 2025-06-04 14:59:28,472 | INFO     | transexitcode: 0
[2025-06-04 10:59:49] 2025-06-04 14:59:28,472 | INFO     | exeerrorcode: 0
[2025-06-04 10:59:49] 2025-06-04 14:59:28,472 | INFO     | exeerrordiag: 
[2025-06-04 10:59:49] 2025-06-04 14:59:28,472 | INFO     | exitcode: 0
[2025-06-04 10:59:49] 2025-06-04 14:59:28,472 | INFO     | exitmsg: OK
[2025-06-04 10:59:49] 2025-06-04 14:59:28,472 | INFO     | cpuconsumptiontime: 34967 s
[2025-06-04 10:59:49] 2025-06-04 14:59:28,472 | INFO     | nevents: 400
[2025-06-04 10:59:49] 2025-06-04 14:59:28,472 | INFO     | neventsw: 0
[2025-06-04 10:59:49] 2025-06-04 14:59:28,472 | INFO     | pid: 207800
[2025-06-04 10:59:49] 2025-06-04 14:59:28,472 | INFO     | pgrp: 207800
[2025-06-04 10:59:49] 2025-06-04 14:59:28,472 | INFO     | corecount: 9
[2025-06-04 10:59:49] 2025-06-04 14:59:28,473 | INFO     | event service: False
[2025-06-04 10:59:49] 2025-06-04 14:59:28,473 | INFO     | sizes: {0: 2397065, 1: 2397320, 9: 2397526, 12: 2397554, 5291: 2423900, 5292: 2432841, 5293: 2433025, 5304: 2433195}
[2025-06-04 10:59:49] 2025-06-04 14:59:28,473 | INFO     | --------------------------------------------------
[2025-06-04 10:59:49] 2025-06-04 14:59:28,473 | INFO     | 
[2025-06-04 10:59:49] 2025-06-04 14:59:28,473 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 10:59:49] 2025-06-04 14:59:28,503 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:59:49] 2025-06-04 14:59:28,504 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:59:49] 2025-06-04 14:59:28,504 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:59:49] 2025-06-04 14:59:28,504 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:59:49] 2025-06-04 14:59:28,504 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:59:49] 2025-06-04 14:59:28,504 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:59:49] 2025-06-04 14:59:28,505 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:59:49] 2025-06-04 14:59:28,505 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:59:49] 2025-06-04 14:59:28,505 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:59:49] 2025-06-04 14:59:28,505 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:59:49] 2025-06-04 14:59:28,505 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:59:49] 2025-06-04 14:59:28,505 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:59:49] 2025-06-04 14:59:28,505 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:59:49] 2025-06-04 14:59:28,505 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:59:49] 2025-06-04 14:59:28,505 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:59:49] 2025-06-04 14:59:28,505 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:59:49] 2025-06-04 14:59:28,506 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:59:49] 2025-06-04 14:59:28,506 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:59:49] 2025-06-04 14:59:28,506 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:59:49] 2025-06-04 14:59:28,506 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:59:49] 2025-06-04 14:59:28,506 | INFO     | job 6679206122 has completed (purged errors)
[2025-06-04 10:59:49] 2025-06-04 14:59:28,506 | INFO     | overall cleanup function is called
[2025-06-04 10:59:49] 2025-06-04 14:59:29,515 | INFO     | --- collectZombieJob: --- 10, [207800]
[2025-06-04 10:59:49] 2025-06-04 14:59:29,515 | INFO     | zombie collector waiting for pid 207800
[2025-06-04 10:59:49] 2025-06-04 14:59:29,515 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:59:49] 2025-06-04 14:59:29,515 | INFO     | collected zombie processes
[2025-06-04 10:59:49] 2025-06-04 14:59:29,515 | INFO     | will attempt to kill all subprocesses of pid=207800
[2025-06-04 10:59:49] 2025-06-04 14:59:29,721 | INFO     | process IDs to be killed: [207800] (in reverse order)
[2025-06-04 10:59:49] 2025-06-04 14:59:29,813 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:59:49] 2025-06-04 14:59:29,814 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:59:49] 2025-06-04 14:59:29,824 | INFO     | did not find any defunct processes belonging to 207800
[2025-06-04 10:59:49] 2025-06-04 14:59:29,830 | INFO     | did not find any defunct processes belonging to 207800
[2025-06-04 10:59:49] 2025-06-04 14:59:29,830 | INFO     | ready for new job
[2025-06-04 10:59:49] 2025-06-04 14:59:29,830 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:59:49] 2025-06-04 14:59:29,832 | INFO     | **************************************
[2025-06-04 10:59:49] 2025-06-04 14:59:29,832 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:59:49] 2025-06-04 14:59:29,832 | INFO     | **************************************
[2025-06-04 10:59:49] 2025-06-04 14:59:29,832 | INFO     | 
[2025-06-04 10:59:49] 2025-06-04 14:59:29,834 | INFO     | architecture information:
[2025-06-04 10:59:49] 2025-06-04 14:59:29,835 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:59:49] 2025-06-04 14:59:29,856 | INFO     | cat /etc/os-release:
[2025-06-04 10:59:49] NAME="CentOS Linux"
[2025-06-04 10:59:49] VERSION="7 (Core)"
[2025-06-04 10:59:49] ID="centos"
[2025-06-04 10:59:49] ID_LIKE="rhel fedora"
[2025-06-04 10:59:49] VERSION_ID="7"
[2025-06-04 10:59:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:59:49] ANSI_COLOR="0;31"
[2025-06-04 10:59:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:59:49] HOME_URL="https://www.centos.org/"
[2025-06-04 10:59:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:59:49] 
[2025-06-04 10:59:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:59:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:59:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:59:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:59:49] 
[2025-06-04 10:59:49] 2025-06-04 14:59:29,856 | INFO     | **************************************
[2025-06-04 10:59:49] 2025-06-04 14:59:30,359 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 10:59:49] 2025-06-04 14:59:30,380 | INFO     | sufficient remaining disk space (56325308416 B)
[2025-06-04 10:59:49] 2025-06-04 14:59:30,381 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:59:49] 2025-06-04 14:59:30,381 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:59:49] 2025-06-04 14:59:30,381 | INFO     | update_server=False
[2025-06-04 10:59:49] 2025-06-04 14:59:30,381 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:59:49] 2025-06-04 14:59:30,381 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:59:49] 2025-06-04 14:59:30,382 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:59:49] 2025-06-04 14:59:30,793 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:59:49] 2025-06-04 14:59:30,794 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:59:49] 2025-06-04 14:59:30,794 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:59:49] 2025-06-04 14:59:30,819 | INFO     | all data control threads have been joined
[2025-06-04 10:59:49] 2025-06-04 14:59:30,938 | INFO     | all payload control threads have been joined
[2025-06-04 10:59:49] 2025-06-04 14:59:31,009 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:59:49] 2025-06-04 14:59:31,009 | INFO     | aborting loop
[2025-06-04 10:59:49] 2025-06-04 14:59:31,386 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:59:49] 2025-06-04 14:59:31,388 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:59:49] 2025-06-04 14:59:31,467 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:59:49] 2025-06-04 14:59:31,491 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:59:49] 2025-06-04 14:59:31,771 | INFO     | all job control threads have been joined
[2025-06-04 10:59:49] 2025-06-04 14:59:31,824 | INFO     | [data] control thread has finished
[2025-06-04 10:59:49] 2025-06-04 14:59:31,943 | INFO     | [payload] control thread has finished
[2025-06-04 10:59:49] 2025-06-04 14:59:32,015 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:59:49] 2025-06-04 14:59:32,071 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:59:49] 2025-06-04 14:59:32,091 | INFO     | [job] validate thread has finished
[2025-06-04 10:59:49] 2025-06-04 14:59:32,388 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:59:49] 2025-06-04 14:59:32,538 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:59:49] 2025-06-04 14:59:32,561 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:59:49] 2025-06-04 14:59:32,662 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:59:49] 2025-06-04 14:59:32,776 | INFO     | [job] control thread has finished
[2025-06-04 10:59:49] 2025-06-04 14:59:32,788 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:59:49] 2025-06-04 14:59:36,794 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:59:49] 2025-06-04 14:59:41,028 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:59:49] 2025-06-04 14:59:42,034 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:59:49] 2025-06-04 14:59:43,349 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139986744756032)>', '<ExcThread(monitor, started 139986431092480)>']
[2025-06-04 10:59:49] 2025-06-04 14:59:43,861 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:59:49] 2025-06-04 14:59:43,861 | INFO     | [monitor] control thread has ended
[2025-06-04 10:59:49] 2025-06-04 14:59:48,350 | INFO     | all workflow threads have been joined
[2025-06-04 10:59:49] 2025-06-04 14:59:48,350 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:59:49] 2025-06-04 14:59:48,351 | INFO     | traces error code: 0
[2025-06-04 10:59:49] 2025-06-04 14:59:48,351 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:59:49] 2025-06-04 14:59:48,489 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:59:49] 2025-06-04 14:59:48,492 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:59:49] 2025-06-04 14:59:48,495 [wrapper] pilotpid: 201073
[2025-06-04 10:59:49] 2025-06-04 14:59:48,497 [wrapper] Pilot exit status: 0
[2025-06-04 10:59:49] 2025-06-04 14:59:48,512 [wrapper] pandaids: 6679206122
[2025-06-04 10:59:49] 2025-06-04 14:59:48,595 [wrapper] cleanup supervisor_pilot  37851 201074
[2025-06-04 10:59:49] 2025-06-04 14:59:48,600 [wrapper] Test setup, not cleaning
[2025-06-04 10:59:49] 2025-06-04 14:59:48,615 [wrapper] apfmon messages muted
[2025-06-04 10:59:49] 2025-06-04 14:59:48,619 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:59:49] 2025-06-04 14:59:48,623 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:59:49]  *** Error codes and diagnostics ***
[2025-06-04 10:59:49]     "exeErrorCode": 0,
[2025-06-04 10:59:49]     "exeErrorDiag": "",
[2025-06-04 10:59:49]     "pilotErrorCode": 0,
[2025-06-04 10:59:49]     "pilotErrorDiag": "",
[2025-06-04 10:59:49]  *** Listing of results directory ***
[2025-06-04 10:59:49] total 386964
[2025-06-04 10:59:49] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 10:59:49] -rwx------ 1 boincer umatlas     37140 Jun  4 04:54 runpilot2-wrapper.sh
[2025-06-04 10:59:49] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 04:54 queuedata.json
[2025-06-04 10:59:49] -rw-r--r-- 1 boincer umatlas       100 Jun  4 09:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:59:49] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 09:30 run_atlas
[2025-06-04 10:59:49] -rw-r--r-- 1 boincer umatlas       105 Jun  4 09:30 job.xml
[2025-06-04 10:59:49] -rw-r--r-- 2 boincer umatlas 215406128 Jun  4 09:30 EVNT.45006593._001698.pool.root.1
[2025-06-04 10:59:49] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:30 start_atlas.sh
[2025-06-04 10:59:49] drwxrwx--x 2 boincer umatlas      4096 Jun  4 09:30 shared
[2025-06-04 10:59:49] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 09:30 input.tar.gz
[2025-06-04 10:59:49] -rw-r--r-- 1 boincer umatlas         0 Jun  4 09:30 boinc_lockfile
[2025-06-04 10:59:49] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 09:30 pandaJob.out
[2025-06-04 10:59:49] -rw------- 1 boincer umatlas    986819 Jun  4 09:30 agis_schedconf.cvmfs.json
[2025-06-04 10:59:49] -rw------- 1 boincer umatlas   1598969 Jun  4 09:30 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:59:49] drwx------ 4 boincer umatlas      4096 Jun  4 09:30 pilot3
[2025-06-04 10:59:49] -rw-r--r-- 1 boincer umatlas      6354 Jun  4 10:58 init_data.xml
[2025-06-04 10:59:49] -rw------- 1 boincer umatlas 175298411 Jun  4 10:58 HITS.45006595._055996.pool.root.1
[2025-06-04 10:59:49] -rw-r--r-- 1 boincer umatlas       530 Jun  4 10:58 boinc_task_state.xml
[2025-06-04 10:59:49] -rw------- 1 boincer umatlas      1060 Jun  4 10:59 memory_monitor_summary.json
[2025-06-04 10:59:49] -rw------- 1 boincer umatlas    341081 Jun  4 10:59 log.45006595._055996.job.log.tgz.1
[2025-06-04 10:59:49] -rw------- 1 boincer umatlas        95 Jun  4 10:59 pilot_heartbeat.json
[2025-06-04 10:59:49] -rw------- 1 boincer umatlas      7744 Jun  4 10:59 heartbeat.json
[2025-06-04 10:59:49] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 10:59 boinc_mmap_file
[2025-06-04 10:59:49] -rw-r--r-- 1 boincer umatlas        27 Jun  4 10:59 wrapper_checkpoint.txt
[2025-06-04 10:59:49] -rw------- 1 boincer umatlas      4425 Jun  4 10:59 pilotlog.txt
[2025-06-04 10:59:49] -rw------- 1 boincer umatlas    515382 Jun  4 10:59 log.45006595._055996.job.log.1
[2025-06-04 10:59:49] -rw------- 1 boincer umatlas       357 Jun  4 10:59 output.list
[2025-06-04 10:59:49] -rw-r--r-- 1 boincer umatlas       620 Jun  4 10:59 runtime_log
[2025-06-04 10:59:49] -rw------- 1 boincer umatlas    880640 Jun  4 10:59 result.tar.gz
[2025-06-04 10:59:49] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 10:59 runtime_log.err
[2025-06-04 10:59:49] -rw------- 1 boincer umatlas       660 Jun  4 10:59 DkPKDm73yg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmVzaKDmTakaHn.diag
[2025-06-04 10:59:49] -rw-r--r-- 1 boincer umatlas     21795 Jun  4 10:59 stderr.txt
[2025-06-04 10:59:49] HITS file was successfully produced:
[2025-06-04 10:59:49] -rw------- 1 boincer umatlas 175298411 Jun  4 10:58 shared/HITS.pool.root.1
[2025-06-04 10:59:49]  *** Contents of shared directory: ***
[2025-06-04 10:59:49] total 382932
[2025-06-04 10:59:49] -rw-r--r-- 2 boincer umatlas 215406128 Jun  4 09:30 ATLAS.root_0
[2025-06-04 10:59:49] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:30 start_atlas.sh
[2025-06-04 10:59:49] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 09:30 input.tar.gz
[2025-06-04 10:59:49] -rw------- 1 boincer umatlas 175298411 Jun  4 10:58 HITS.pool.root.1
[2025-06-04 10:59:49] -rw------- 1 boincer umatlas    880640 Jun  4 10:59 result.tar.gz
10:59:50 (197480): run_atlas exited; CPU time 35036.888372
10:59:50 (197480): called boinc_finish(0)

</stderr_txt>
]]>

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