Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:35:36 (536346): wrapper (7.7.26015): starting
02:35:36 (536346): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 02:35:36] Arguments: --nthreads 4
[2025-06-06 02:35:36] Threads: 4
[2025-06-06 02:35:36] Checking for CVMFS
[2025-06-06 02:35:36] No cvmfs_config command found, will try listing directly
[2025-06-06 02:35:36] CVMFS is ok
[2025-06-06 02:35:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 02:35:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 02:35:36] Further information can be found at the LHC@home message board.
[2025-06-06 02:35:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 02:35:36] Checking for apptainer binary...
[2025-06-06 02:35:36] which: no apptainer in ((null))
[2025-06-06 02:35:36] apptainer is not installed, using version from CVMFS
[2025-06-06 02:35:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 02:35:36] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2025-06-06 02:35:36] apptainer works
[2025-06-06 02:35:36] Set ATHENA_PROC_NUMBER=4
[2025-06-06 02:35:36] Set ATHENA_CORE_NUMBER=4
[2025-06-06 02:35:36] Starting ATLAS job with PandaID=6679054834
[2025-06-06 02:35:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 05:31:29]  *** The last 200 lines of the pilot log: ***
[2025-06-06 05:31:29] 2025-06-06 03:28:36,044 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6679054834/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 05:31:29] 2025-06-06 03:28:36,045 | INFO     | extracted standard info from prmon json
[2025-06-06 05:31:29] 2025-06-06 03:28:36,045 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 05:31:29] 2025-06-06 03:28:36,045 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 05:31:29] 2025-06-06 03:28:36,045 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 05:31:29] 2025-06-06 03:28:36,046 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 05:31:29] 2025-06-06 03:28:36,049 | INFO     | fitting pss+swap vs Time
[2025-06-06 05:31:29] 2025-06-06 03:28:36,050 | INFO     | sum of square deviations: 1523386702.5
[2025-06-06 05:31:29] 2025-06-06 03:28:36,051 | INFO     | sum of deviations: -13013213295.500004
[2025-06-06 05:31:29] 2025-06-06 03:28:36,051 | INFO     | mean x: 1749175325.5
[2025-06-06 05:31:29] 2025-06-06 03:28:36,051 | INFO     | mean y: 2343097.205882353
[2025-06-06 05:31:29] 2025-06-06 03:28:36,051 | INFO     | -- intersect: 14944308630.05597
[2025-06-06 05:31:29] 2025-06-06 03:28:36,052 | INFO     | intersect: 14944308630.05597
[2025-06-06 05:31:29] 2025-06-06 03:28:36,052 | INFO     | chi2: 2.2306711611180465
[2025-06-06 05:31:29] 2025-06-06 03:28:36,052 | INFO     | sum of square deviations: 1392881930.0
[2025-06-06 05:31:29] 2025-06-06 03:28:36,053 | INFO     | sum of deviations: -2933429549.000001
[2025-06-06 05:31:29] 2025-06-06 03:28:36,054 | INFO     | mean x: 1749175173.0
[2025-06-06 05:31:29] 2025-06-06 03:28:36,054 | INFO     | mean y: 2354603.587878788
[2025-06-06 05:31:29] 2025-06-06 03:28:36,054 | INFO     | -- intersect: 3686142890.55014
[2025-06-06 05:31:29] 2025-06-06 03:28:36,054 | INFO     | intersect: 3686142890.55014
[2025-06-06 05:31:29] 2025-06-06 03:28:36,055 | INFO     | chi2: 1.572478857950242
[2025-06-06 05:31:29] 2025-06-06 03:28:36,055 | INFO     | current chi2=1.572478857950242 (change=29.506469381973293 %)
[2025-06-06 05:31:29] 2025-06-06 03:28:36,055 | INFO     | sum of square deviations: 1270051720.0
[2025-06-06 05:31:29] 2025-06-06 03:28:36,056 | INFO     | sum of deviations: -2823328361.5
[2025-06-06 05:31:29] 2025-06-06 03:28:36,056 | INFO     | mean x: 1749175020.5
[2025-06-06 05:31:29] 2025-06-06 03:28:36,056 | INFO     | mean y: 2354740.34375
[2025-06-06 05:31:29] 2025-06-06 03:28:36,057 | INFO     | -- intersect: 3890775476.9457164
[2025-06-06 05:31:29] 2025-06-06 03:28:36,057 | INFO     | intersect: 3890775476.9457164
[2025-06-06 05:31:29] 2025-06-06 03:28:36,057 | INFO     | chi2: 1.5719635036457724
[2025-06-06 05:31:29] 2025-06-06 03:28:36,057 | INFO     | current chi2=1.5719635036457724 (change=0.032773369375621295 %)
[2025-06-06 05:31:29] 2025-06-06 03:28:36,057 | INFO     | right removable region: 159
[2025-06-06 05:31:29] 2025-06-06 03:28:36,058 | INFO     | sum of square deviations: 1392881930.0
[2025-06-06 05:31:29] 2025-06-06 03:28:36,059 | INFO     | sum of deviations: -36218913724.0
[2025-06-06 05:31:29] 2025-06-06 03:28:36,059 | INFO     | mean x: 1749175478.0
[2025-06-06 05:31:29] 2025-06-06 03:28:36,059 | INFO     | mean y: 2369820.4
[2025-06-06 05:31:29] 2025-06-06 03:28:36,059 | INFO     | -- intersect: 45485934766.79748
[2025-06-06 05:31:29] 2025-06-06 03:28:36,059 | INFO     | intersect: 45485934766.79748
[2025-06-06 05:31:29] 2025-06-06 03:28:36,060 | INFO     | chi2: 0.8057738007403517
[2025-06-06 05:31:29] 2025-06-06 03:28:36,060 | INFO     | current chi2=0.8057738007403517 (change=63.87751745817678 %)
[2025-06-06 05:31:29] 2025-06-06 03:28:36,060 | INFO     | sum of square deviations: 1270051720.0
[2025-06-06 05:31:29] 2025-06-06 03:28:36,061 | INFO     | sum of deviations: -29206656253.5
[2025-06-06 05:31:29] 2025-06-06 03:28:36,061 | INFO     | mean x: 1749175630.5
[2025-06-06 05:31:29] 2025-06-06 03:28:36,062 | INFO     | mean y: 2361079.14375
[2025-06-06 05:31:29] 2025-06-06 03:28:36,062 | INFO     | -- intersect: 40227157095.33484
[2025-06-06 05:31:29] 2025-06-06 03:28:36,062 | INFO     | intersect: 40227157095.33484
[2025-06-06 05:31:29] 2025-06-06 03:28:36,062 | INFO     | chi2: 0.7748733756825932
[2025-06-06 05:31:29] 2025-06-06 03:28:36,062 | INFO     | current chi2=0.7748733756825932 (change=3.834875870792387 %)
[2025-06-06 05:31:29] 2025-06-06 03:28:36,063 | INFO     | left removable region: 20
[2025-06-06 05:31:29] 2025-06-06 03:28:36,063 | INFO     | sum of square deviations: 832722590.0
[2025-06-06 05:31:29] 2025-06-06 03:28:36,064 | INFO     | sum of deviations: -11950295890.0
[2025-06-06 05:31:29] 2025-06-06 03:28:36,064 | INFO     | mean x: 1749175600.0
[2025-06-06 05:31:29] 2025-06-06 03:28:36,064 | INFO     | mean y: 2364351.9136690646
[2025-06-06 05:31:29] 2025-06-06 03:28:36,064 | INFO     | -- intersect: 25104560731.104347
[2025-06-06 05:31:29] 2025-06-06 03:28:36,064 | INFO     | intersect: 25104560731.104347
[2025-06-06 05:31:29] 2025-06-06 03:28:36,065 | INFO     | chi2: 0.07709239040030823
[2025-06-06 05:31:29] 2025-06-06 03:28:36,065 | INFO     | -- intersect: 25104560731.104347
[2025-06-06 05:31:29] 2025-06-06 03:28:36,065 | INFO     | current memory leak: -14.35 B/s (using 139 data points, chi2=0.08)
[2025-06-06 05:31:29] 2025-06-06 03:28:36,066 | INFO     | ..............................
[2025-06-06 05:31:29] 2025-06-06 03:28:36,066 | INFO     | . Timing measurements:
[2025-06-06 05:31:29] 2025-06-06 03:28:36,066 | INFO     | . get job = 0 s
[2025-06-06 05:31:29] 2025-06-06 03:28:36,066 | INFO     | . initial setup = 1 s
[2025-06-06 05:31:29] 2025-06-06 03:28:36,066 | INFO     | . payload setup = 6 s
[2025-06-06 05:31:29] 2025-06-06 03:28:36,066 | INFO     | . stage-in = 0 s
[2025-06-06 05:31:29] 2025-06-06 03:28:36,066 | INFO     | . payload execution = 10335 s
[2025-06-06 05:31:29] 2025-06-06 03:28:36,066 | INFO     | . stage-out = 0 s
[2025-06-06 05:31:29] 2025-06-06 03:28:36,067 | INFO     | . log creation = 0 s
[2025-06-06 05:31:29] 2025-06-06 03:28:36,067 | INFO     | ..............................
[2025-06-06 05:31:29] 2025-06-06 03:28:36,579 | INFO     | 
[2025-06-06 05:31:29] 2025-06-06 03:28:36,580 | INFO     | job summary report
[2025-06-06 05:31:29] 2025-06-06 03:28:36,580 | INFO     | --------------------------------------------------
[2025-06-06 05:31:29] 2025-06-06 03:28:36,580 | INFO     | PanDA job id: 6679054834
[2025-06-06 05:31:29] 2025-06-06 03:28:36,580 | INFO     | task id: 45006595
[2025-06-06 05:31:29] 2025-06-06 03:28:36,580 | INFO     | errors: (none)
[2025-06-06 05:31:29] 2025-06-06 03:28:36,580 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 05:31:29] 2025-06-06 03:28:36,581 | INFO     | pilot state: finished 
[2025-06-06 05:31:29] 2025-06-06 03:28:36,581 | INFO     | transexitcode: 0
[2025-06-06 05:31:29] 2025-06-06 03:28:36,581 | INFO     | exeerrorcode: 0
[2025-06-06 05:31:29] 2025-06-06 03:28:36,581 | INFO     | exeerrordiag: 
[2025-06-06 05:31:29] 2025-06-06 03:28:36,581 | INFO     | exitcode: 0
[2025-06-06 05:31:29] 2025-06-06 03:28:36,581 | INFO     | exitmsg: OK
[2025-06-06 05:31:29] 2025-06-06 03:28:36,581 | INFO     | cpuconsumptiontime: 39545 s
[2025-06-06 05:31:29] 2025-06-06 03:28:36,581 | INFO     | nevents: 400
[2025-06-06 05:31:29] 2025-06-06 03:28:36,581 | INFO     | neventsw: 0
[2025-06-06 05:31:29] 2025-06-06 03:28:36,581 | INFO     | pid: 549013
[2025-06-06 05:31:29] 2025-06-06 03:28:36,582 | INFO     | pgrp: 549013
[2025-06-06 05:31:29] 2025-06-06 03:28:36,582 | INFO     | corecount: 4
[2025-06-06 05:31:29] 2025-06-06 03:28:36,582 | INFO     | event service: False
[2025-06-06 05:31:29] 2025-06-06 03:28:36,582 | INFO     | sizes: {0: 2397303, 4: 2397509, 11: 2397537, 10345: 2426107, 10346: 2435070, 10349: 2435154, 10355: 2435452}
[2025-06-06 05:31:29] 2025-06-06 03:28:36,582 | INFO     | --------------------------------------------------
[2025-06-06 05:31:29] 2025-06-06 03:28:36,582 | INFO     | 
[2025-06-06 05:31:29] 2025-06-06 03:28:36,582 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-06-06 05:31:29] 2025-06-06 03:28:36,600 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 05:31:29] 2025-06-06 03:28:36,600 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 05:31:29] 2025-06-06 03:28:36,600 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 05:31:29] 2025-06-06 03:28:36,600 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 05:31:29] 2025-06-06 03:28:36,600 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 05:31:29] 2025-06-06 03:28:36,601 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 05:31:29] 2025-06-06 03:28:36,601 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 05:31:29] 2025-06-06 03:28:36,601 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 05:31:29] 2025-06-06 03:28:36,601 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 05:31:29] 2025-06-06 03:28:36,601 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 05:31:29] 2025-06-06 03:28:36,601 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 05:31:29] 2025-06-06 03:28:36,601 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 05:31:29] 2025-06-06 03:28:36,601 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 05:31:29] 2025-06-06 03:28:36,601 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 05:31:29] 2025-06-06 03:28:36,602 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 05:31:29] 2025-06-06 03:28:36,602 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 05:31:29] 2025-06-06 03:28:36,602 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 05:31:29] 2025-06-06 03:28:36,602 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 05:31:29] 2025-06-06 03:28:36,602 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 05:31:29] 2025-06-06 03:28:36,602 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 05:31:29] 2025-06-06 03:28:36,602 | INFO     | job 6679054834 has completed (purged errors)
[2025-06-06 05:31:29] 2025-06-06 03:28:36,602 | INFO     | overall cleanup function is called
[2025-06-06 05:31:29] 2025-06-06 03:28:37,610 | INFO     | --- collectZombieJob: --- 10, [549013]
[2025-06-06 05:31:29] 2025-06-06 03:28:37,611 | INFO     | zombie collector waiting for pid 549013
[2025-06-06 05:31:29] 2025-06-06 03:28:37,611 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 05:31:29] 2025-06-06 03:28:37,611 | INFO     | collected zombie processes
[2025-06-06 05:31:29] 2025-06-06 03:28:37,611 | INFO     | will attempt to kill all subprocesses of pid=549013
[2025-06-06 05:31:29] 2025-06-06 03:28:37,893 | INFO     | process IDs to be killed: [549013] (in reverse order)
[2025-06-06 05:31:29] 2025-06-06 03:28:37,964 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 05:31:29] 2025-06-06 03:28:37,965 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 05:31:29] 2025-06-06 03:28:37,972 | INFO     | did not find any defunct processes belonging to 549013
[2025-06-06 05:31:29] 2025-06-06 03:28:37,979 | INFO     | did not find any defunct processes belonging to 549013
[2025-06-06 05:31:29] 2025-06-06 03:28:37,979 | INFO     | ready for new job
[2025-06-06 05:31:29] 2025-06-06 03:28:37,979 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 05:31:29] 2025-06-06 03:28:37,981 | INFO     | **************************************
[2025-06-06 05:31:29] 2025-06-06 03:28:37,981 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 05:31:29] 2025-06-06 03:28:37,981 | INFO     | **************************************
[2025-06-06 05:31:29] 2025-06-06 03:28:37,981 | INFO     | 
[2025-06-06 05:31:29] 2025-06-06 03:28:37,984 | INFO     | architecture information:
[2025-06-06 05:31:29] 2025-06-06 03:28:37,984 | INFO     | executing command: cat /etc/os-release
[2025-06-06 05:31:29] 2025-06-06 03:28:37,996 | INFO     | cat /etc/os-release:
[2025-06-06 05:31:29] NAME="CentOS Linux"
[2025-06-06 05:31:29] VERSION="7 (Core)"
[2025-06-06 05:31:29] ID="centos"
[2025-06-06 05:31:29] ID_LIKE="rhel fedora"
[2025-06-06 05:31:29] VERSION_ID="7"
[2025-06-06 05:31:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 05:31:29] ANSI_COLOR="0;31"
[2025-06-06 05:31:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 05:31:29] HOME_URL="https://www.centos.org/"
[2025-06-06 05:31:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 05:31:29] 
[2025-06-06 05:31:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 05:31:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 05:31:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 05:31:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 05:31:29] 
[2025-06-06 05:31:29] 2025-06-06 03:28:37,996 | INFO     | **************************************
[2025-06-06 05:31:29] 2025-06-06 03:28:38,499 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-06-06 05:31:29] 2025-06-06 03:28:38,512 | INFO     | sufficient remaining disk space (1642368860160 B)
[2025-06-06 05:31:29] 2025-06-06 03:28:38,513 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 05:31:29] 2025-06-06 03:28:38,513 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 05:31:29] 2025-06-06 03:28:38,513 | INFO     | update_server=False
[2025-06-06 05:31:29] 2025-06-06 03:28:38,513 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 05:31:29] 2025-06-06 03:28:38,514 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 05:31:29] 2025-06-06 03:28:38,514 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 05:31:29] 2025-06-06 03:28:38,514 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 05:31:29] 2025-06-06 03:28:38,514 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 05:31:29] 2025-06-06 03:28:39,020 | INFO     | all data control threads have been joined
[2025-06-06 05:31:29] 2025-06-06 03:28:39,040 | INFO     | all job control threads have been joined
[2025-06-06 05:31:29] 2025-06-06 03:28:39,436 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:31:29] 2025-06-06 03:28:39,436 | INFO     | aborting loop
[2025-06-06 05:31:29] 2025-06-06 03:28:39,468 | INFO     | all payload control threads have been joined
[2025-06-06 05:31:29] 2025-06-06 03:28:39,519 | INFO     | [job] retrieve thread has finished
[2025-06-06 05:31:29] 2025-06-06 03:28:39,585 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 05:31:29] 2025-06-06 03:28:39,687 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 05:31:29] 2025-06-06 03:28:39,763 | INFO     | [payload] validate_post thread has finished
[2025-06-06 05:31:29] 2025-06-06 03:28:39,804 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 05:31:29] 2025-06-06 03:28:39,979 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 05:31:29] 2025-06-06 03:28:40,025 | INFO     | [data] control thread has finished
[2025-06-06 05:31:29] 2025-06-06 03:28:40,044 | INFO     | [job] control thread has finished
[2025-06-06 05:31:29] 2025-06-06 03:28:40,361 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 05:31:29] 2025-06-06 03:28:40,419 | INFO     | [payload] failed_post thread has finished
[2025-06-06 05:31:29] 2025-06-06 03:28:40,438 | INFO     | [job] job monitor thread has finished
[2025-06-06 05:31:29] 2025-06-06 03:28:40,474 | INFO     | [payload] control thread has finished
[2025-06-06 05:31:29] 2025-06-06 03:28:40,667 | INFO     | [data] copytool_in thread has finished
[2025-06-06 05:31:29] 2025-06-06 03:28:40,720 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 05:31:29] 2025-06-06 03:28:40,808 | INFO     | [job] validate thread has finished
[2025-06-06 05:31:29] 2025-06-06 03:28:41,191 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:31:29] 2025-06-06 03:28:41,981 | INFO     | [data] copytool_out thread has finished
[2025-06-06 05:31:29] 2025-06-06 03:28:42,197 | INFO     | [job] queue monitor thread has finished
[2025-06-06 05:31:29] 2025-06-06 03:28:44,726 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 05:31:29] 2025-06-06 03:28:46,341 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23330447660864)>', '<ExcThread(monitor, started 23330207790848)>']
[2025-06-06 05:31:29] 2025-06-06 03:28:46,555 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 05:31:29] 2025-06-06 03:28:46,556 | INFO     | [monitor] control thread has ended
[2025-06-06 05:31:29] 2025-06-06 03:28:51,366 | INFO     | all workflow threads have been joined
[2025-06-06 05:31:29] 2025-06-06 03:28:51,366 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 05:31:29] 2025-06-06 03:28:51,367 | INFO     | traces error code: 0
[2025-06-06 05:31:29] 2025-06-06 03:28:51,367 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 05:31:29] 2025-06-06 03:28:51,496 [wrapper] ==== pilot stdout END ====
[2025-06-06 05:31:29] 2025-06-06 03:28:51,499 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 05:31:29] 2025-06-06 03:28:51,501 [wrapper] pilotpid: 540064
[2025-06-06 05:31:29] 2025-06-06 03:28:51,503 [wrapper] Pilot exit status: 0
[2025-06-06 05:31:29] 2025-06-06 03:28:51,512 [wrapper] pandaids: 6679054834
[2025-06-06 05:31:29] 2025-06-06 03:28:51,559 [wrapper] cleanup supervisor_pilot  729416 540065
[2025-06-06 05:31:29] 2025-06-06 03:28:51,562 [wrapper] Test setup, not cleaning
[2025-06-06 05:31:29] 2025-06-06 03:28:51,564 [wrapper] apfmon messages muted
[2025-06-06 05:31:29] 2025-06-06 03:28:51,566 [wrapper] ==== wrapper stdout END ====
[2025-06-06 05:31:29] 2025-06-06 03:28:51,568 [wrapper] ==== wrapper stderr END ====
[2025-06-06 05:31:29]  *** Error codes and diagnostics ***
[2025-06-06 05:31:29]     "exeErrorCode": 0,
[2025-06-06 05:31:29]     "exeErrorDiag": "",
[2025-06-06 05:31:29]     "pilotErrorCode": 0,
[2025-06-06 05:31:29]     "pilotErrorDiag": "",
[2025-06-06 05:31:29]  *** Listing of results directory ***
[2025-06-06 05:31:29] total 391352
[2025-06-06 05:31:29] -rw-r--r-- 1 boinc boinc    495897 Jun  4 10:31 pilot3.tar.gz
[2025-06-06 05:31:29] -rwx------ 1 boinc boinc     37140 Jun  4 10:45 runpilot2-wrapper.sh
[2025-06-06 05:31:29] -rw-r--r-- 1 boinc boinc      5111 Jun  4 10:45 queuedata.json
[2025-06-06 05:31:29] -rw-r--r-- 1 boinc boinc       100 Jun  6 02:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 05:31:29] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 02:35 run_atlas
[2025-06-06 05:31:29] -rw-r--r-- 1 boinc boinc       105 Jun  6 02:35 job.xml
[2025-06-06 05:31:29] -rw-r--r-- 2 boinc boinc 215570731 Jun  6 02:35 EVNT.45006593._001067.pool.root.1
[2025-06-06 05:31:29] -rw-r--r-- 2 boinc boinc     15093 Jun  6 02:35 start_atlas.sh
[2025-06-06 05:31:29] drwxrwx--x 2 boinc boinc      4096 Jun  6 02:35 shared
[2025-06-06 05:31:29] -rw-r--r-- 2 boinc boinc    508878 Jun  6 02:35 input.tar.gz
[2025-06-06 05:31:29] -rw-r--r-- 1 boinc boinc      6422 Jun  6 02:35 init_data.xml
[2025-06-06 05:31:29] -rw-r--r-- 1 boinc boinc         0 Jun  6 02:35 boinc_lockfile
[2025-06-06 05:31:29] -rw-r--r-- 1 boinc boinc      2525 Jun  6 02:35 pandaJob.out
[2025-06-06 05:31:29] -rw------- 1 boinc boinc    987721 Jun  6 02:35 agis_schedconf.cvmfs.json
[2025-06-06 05:31:29] -rw------- 1 boinc boinc   1598969 Jun  6 02:35 agis_ddmendpoints.agis.ALL.json
[2025-06-06 05:31:29] drwx------ 4 boinc boinc      4096 Jun  6 02:35 pilot3
[2025-06-06 05:31:29] -rw------- 1 boinc boinc 178752934 Jun  6 05:27 HITS.45006595._055811.pool.root.1
[2025-06-06 05:31:29] -rw-r--r-- 1 boinc boinc       528 Jun  6 05:27 boinc_task_state.xml
[2025-06-06 05:31:29] -rw------- 1 boinc boinc        95 Jun  6 05:28 pilot_heartbeat.json
[2025-06-06 05:31:29] -rw------- 1 boinc boinc      1036 Jun  6 05:28 memory_monitor_summary.json
[2025-06-06 05:31:29] -rw------- 1 boinc boinc    314609 Jun  6 05:28 log.45006595._055811.job.log.tgz.1
[2025-06-06 05:31:29] -rw------- 1 boinc boinc      7729 Jun  6 05:28 heartbeat.json
[2025-06-06 05:31:29] -rw------- 1 boinc boinc      4487 Jun  6 05:28 pilotlog.txt
[2025-06-06 05:31:29] -rw------- 1 boinc boinc    980765 Jun  6 05:28 log.45006595._055811.job.log.1
[2025-06-06 05:31:29] -rw------- 1 boinc boinc       357 Jun  6 05:28 output.list
[2025-06-06 05:31:29] -rw-r--r-- 1 boinc boinc       620 Jun  6 05:28 runtime_log
[2025-06-06 05:31:29] -rw------- 1 boinc boinc   1310720 Jun  6 05:28 result.tar.gz
[2025-06-06 05:31:29] -rw-r--r-- 1 boinc boinc      9026 Jun  6 05:28 runtime_log.err
[2025-06-06 05:31:29] -rw------- 1 boinc boinc       665 Jun  6 05:28 R23LDmbvyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvonKDmof2Odn.diag
[2025-06-06 05:31:29] -rw-r--r-- 1 boinc boinc        27 Jun  6 05:31 wrapper_checkpoint.txt
[2025-06-06 05:31:29] -rw-r--r-- 1 boinc boinc      8192 Jun  6 05:31 boinc_mmap_file
[2025-06-06 05:31:29] -rw-r--r-- 1 boinc boinc     20603 Jun  6 05:31 stderr.txt
[2025-06-06 05:31:29] HITS file was successfully produced:
[2025-06-06 05:31:29] -rw------- 1 boinc boinc 178752934 Jun  6 05:27 shared/HITS.pool.root.1
[2025-06-06 05:31:29]  *** Contents of shared directory: ***
[2025-06-06 05:31:29] total 386888
[2025-06-06 05:31:29] -rw-r--r-- 2 boinc boinc 215570731 Jun  6 02:35 ATLAS.root_0
[2025-06-06 05:31:29] -rw-r--r-- 2 boinc boinc     15093 Jun  6 02:35 start_atlas.sh
[2025-06-06 05:31:29] -rw-r--r-- 2 boinc boinc    508878 Jun  6 02:35 input.tar.gz
[2025-06-06 05:31:29] -rw------- 1 boinc boinc 178752934 Jun  6 05:27 HITS.pool.root.1
[2025-06-06 05:31:29] -rw------- 1 boinc boinc   1310720 Jun  6 05:28 result.tar.gz
05:31:31 (536346): run_atlas exited; CPU time 39876.392478
05:31:31 (536346): called boinc_finish(0)

</stderr_txt>
]]>

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