Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:42:26 (187374): wrapper (7.7.26015): starting
08:42:26 (187374): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:42:26] Arguments: --nthreads 8
[2025-06-04 08:42:26] Threads: 8
[2025-06-04 08:42:26] Checking for CVMFS
[2025-06-04 08:42:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:42:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:42:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:42:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:42:26] 2.12.6.0 912492 23313 446364 146780 3 482 28743202 40960001 12504 16776704 0 111955625 99.719 81552434 26933 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:42:26] CVMFS is ok
[2025-06-04 08:42:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:42:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:42:26] Further information can be found at the LHC@home message board.
[2025-06-04 08:42:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:42:26] Checking for apptainer binary...
[2025-06-04 08:42:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:42:26] Running /usr/bin/apptainer --version
[2025-06-04 08:42:26] apptainer version 1.4.1-1.el9
[2025-06-04 08:42:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:42:26] c7-10-12.aglt2.org
[2025-06-04 08:42:26] apptainer works
[2025-06-04 08:42:26] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:42:26] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:42:26] Starting ATLAS job with PandaID=6679003535
[2025-06-04 08:42:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:44:19]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:44:19]  is_tar=False
[2025-06-04 09:44:19]  lfn=log.45006595._055769.job.log.tgz.1
[2025-06-04 09:44:19]  mtime=0
[2025-06-04 09:44:19]  protocol_id=None
[2025-06-04 09:44:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:44:19]  replicas=None
[2025-06-04 09:44:19]  scope=mc23_13p6TeV
[2025-06-04 09:44:19]  status=None
[2025-06-04 09:44:19]  status_code=0
[2025-06-04 09:44:19]  storage_token=
[2025-06-04 09:44:19]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6679003535/log.45006595._055769.job.log.tgz.1
[2025-06-04 09:44:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/48/ed/log.45006595._055769.job.log.tgz.1
[2025-06-04 09:44:19]  workdir=None
[2025-06-04 09:44:19] ]
[2025-06-04 09:44:19] 2025-06-04 13:43:57,400 | INFO     | transferring file log.45006595._055769.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6679003535/log.45006595._055769.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:44:19] 2025-06-04 13:43:57,400 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6679003535/log.45006595._055769.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._055769.job
[2025-06-04 09:44:19] 2025-06-04 13:43:57,415 | INFO     | adding to output.list: log.45006595._055769.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/48/ed/log.45006595._055769.job.log.tg
[2025-06-04 09:44:19] 2025-06-04 13:43:57,416 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:44:19] 2025-06-04 13:43:57,416 | INFO     | summary of transferred files:
[2025-06-04 09:44:19] 2025-06-04 13:43:57,416 | INFO     |  -- lfn=log.45006595._055769.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:44:19] 2025-06-04 13:43:57,416 | INFO     | stage-out finished correctly
[2025-06-04 09:44:19] 2025-06-04 13:43:58,053 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:44:19] 2025-06-04 13:43:59,685 | INFO     | PID=192344 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 09:44:19] 2025-06-04 13:43:59,685 | INFO     | .. there are 19 such processes running
[2025-06-04 09:44:19] 2025-06-04 13:44:00,058 | INFO     | job 6679003535 has state=finished
[2025-06-04 09:44:19] 2025-06-04 13:44:00,059 | INFO     | preparing for final server update for job 6679003535 in state='finished'
[2025-06-04 09:44:19] 2025-06-04 13:44:00,059 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:44:19] 2025-06-04 13:44:00,059 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:44:19] 2025-06-04 13:44:00,059 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:44:19] 2025-06-04 13:44:00,059 | INFO     | job 6679003535 has finished - writing final server update
[2025-06-04 09:44:19] 2025-06-04 13:44:00,060 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:44:19] 2025-06-04 13:44:00,077 | INFO     | executing command: lscpu
[2025-06-04 09:44:19] 2025-06-04 13:44:00,154 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:44:19] 2025-06-04 13:44:02,517 | WARNING  | process 199459 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 09:44:19] 2025-06-04 13:44:02,518 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6679003535/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:44:19] 2025-06-04 13:44:02,518 | INFO     | reaping zombies for max 20 seconds
[2025-06-04 09:44:19] 2025-06-04 13:44:02,534 | INFO     | checking for looping job (in state=finished)
[2025-06-04 09:44:19] 2025-06-04 13:44:02,535 | INFO     | using looping job limit: 7200 s
[2025-06-04 09:44:19] 2025-06-04 13:44:02,791 | INFO     | number of running child processes to parent process 199459: 1
[2025-06-04 09:44:19] 2025-06-04 13:44:02,792 | INFO     | maximum number of monitored processes: 6
[2025-06-04 09:44:19] 2025-06-04 13:44:03,881 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 09:44:19] 2025-06-04 13:44:03,882 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6679003535/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:44:19] 2025-06-04 13:44:03,882 | INFO     | extracted standard info from prmon json
[2025-06-04 09:44:19] 2025-06-04 13:44:03,882 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:44:19] 2025-06-04 13:44:03,882 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:44:19] 2025-06-04 13:44:03,883 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:44:19] 2025-06-04 13:44:03,883 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:44:19] 2025-06-04 13:44:03,884 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:44:19] 2025-06-04 13:44:03,884 | INFO     | sum of square deviations: 46147842.0
[2025-06-04 09:44:19] 2025-06-04 13:44:03,885 | INFO     | sum of deviations: -638249953.9999999
[2025-06-04 09:44:19] 2025-06-04 13:44:03,885 | INFO     | mean x: 1749042874.0
[2025-06-04 09:44:19] 2025-06-04 13:44:03,885 | INFO     | mean y: 2280650.7924528304
[2025-06-04 09:44:19] 2025-06-04 13:44:03,885 | INFO     | -- intersect: 24192502457.362034
[2025-06-04 09:44:19] 2025-06-04 13:44:03,885 | INFO     | intersect: 24192502457.362034
[2025-06-04 09:44:19] 2025-06-04 13:44:03,885 | INFO     | chi2: 0.7803005051342061
[2025-06-04 09:44:19] 2025-06-04 13:44:03,885 | INFO     | -- intersect: 24192502457.362034
[2025-06-04 09:44:19] 2025-06-04 13:44:03,885 | INFO     | current memory leak: -13.83 B/s (using 53 data points, chi2=0.78)
[2025-06-04 09:44:19] 2025-06-04 13:44:03,886 | INFO     | ..............................
[2025-06-04 09:44:19] 2025-06-04 13:44:03,886 | INFO     | . Timing measurements:
[2025-06-04 09:44:19] 2025-06-04 13:44:03,886 | INFO     | . get job = 0 s
[2025-06-04 09:44:19] 2025-06-04 13:44:03,886 | INFO     | . initial setup = 2 s
[2025-06-04 09:44:19] 2025-06-04 13:44:03,886 | INFO     | . payload setup = 6 s
[2025-06-04 09:44:19] 2025-06-04 13:44:03,886 | INFO     | . stage-in = 0 s
[2025-06-04 09:44:19] 2025-06-04 13:44:03,886 | INFO     | . payload execution = 3654 s
[2025-06-04 09:44:19] 2025-06-04 13:44:03,886 | INFO     | . stage-out = 0 s
[2025-06-04 09:44:19] 2025-06-04 13:44:03,886 | INFO     | . log creation = 0 s
[2025-06-04 09:44:19] 2025-06-04 13:44:03,886 | INFO     | ..............................
[2025-06-04 09:44:19] 2025-06-04 13:44:04,349 | INFO     | 
[2025-06-04 09:44:19] 2025-06-04 13:44:04,349 | INFO     | job summary report
[2025-06-04 09:44:19] 2025-06-04 13:44:04,349 | INFO     | --------------------------------------------------
[2025-06-04 09:44:19] 2025-06-04 13:44:04,349 | INFO     | PanDA job id: 6679003535
[2025-06-04 09:44:19] 2025-06-04 13:44:04,349 | INFO     | task id: 45006595
[2025-06-04 09:44:19] 2025-06-04 13:44:04,349 | INFO     | errors: (none)
[2025-06-04 09:44:19] 2025-06-04 13:44:04,349 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:44:19] 2025-06-04 13:44:04,349 | INFO     | pilot state: finished 
[2025-06-04 09:44:19] 2025-06-04 13:44:04,349 | INFO     | transexitcode: 0
[2025-06-04 09:44:19] 2025-06-04 13:44:04,349 | INFO     | exeerrorcode: 0
[2025-06-04 09:44:19] 2025-06-04 13:44:04,350 | INFO     | exeerrordiag: 
[2025-06-04 09:44:19] 2025-06-04 13:44:04,350 | INFO     | exitcode: 0
[2025-06-04 09:44:19] 2025-06-04 13:44:04,350 | INFO     | exitmsg: OK
[2025-06-04 09:44:19] 2025-06-04 13:44:04,350 | INFO     | cpuconsumptiontime: 24027 s
[2025-06-04 09:44:19] 2025-06-04 13:44:04,350 | INFO     | nevents: 400
[2025-06-04 09:44:19] 2025-06-04 13:44:04,350 | INFO     | neventsw: 0
[2025-06-04 09:44:19] 2025-06-04 13:44:04,350 | INFO     | pid: 199459
[2025-06-04 09:44:19] 2025-06-04 13:44:04,350 | INFO     | pgrp: 199459
[2025-06-04 09:44:19] 2025-06-04 13:44:04,350 | INFO     | corecount: 8
[2025-06-04 09:44:19] 2025-06-04 13:44:04,350 | INFO     | event service: False
[2025-06-04 09:44:19] 2025-06-04 13:44:04,350 | INFO     | sizes: {0: 2397292, 4: 2397498, 11: 2397526, 3664: 2423267, 3665: 2432208, 3666: 2432264, 3672: 2432562}
[2025-06-04 09:44:19] 2025-06-04 13:44:04,350 | INFO     | --------------------------------------------------
[2025-06-04 09:44:19] 2025-06-04 13:44:04,350 | INFO     | 
[2025-06-04 09:44:19] 2025-06-04 13:44:04,350 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 09:44:19] 2025-06-04 13:44:04,370 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:44:19] 2025-06-04 13:44:04,371 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:44:19] 2025-06-04 13:44:04,371 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:44:19] 2025-06-04 13:44:04,371 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:44:19] 2025-06-04 13:44:04,371 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:44:19] 2025-06-04 13:44:04,371 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:44:19] 2025-06-04 13:44:04,371 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:44:19] 2025-06-04 13:44:04,371 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:44:19] 2025-06-04 13:44:04,371 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:44:19] 2025-06-04 13:44:04,371 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:44:19] 2025-06-04 13:44:04,371 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:44:19] 2025-06-04 13:44:04,371 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:44:19] 2025-06-04 13:44:04,371 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:44:19] 2025-06-04 13:44:04,371 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:44:19] 2025-06-04 13:44:04,372 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:44:19] 2025-06-04 13:44:04,372 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:44:19] 2025-06-04 13:44:04,372 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:44:19] 2025-06-04 13:44:04,372 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:44:19] 2025-06-04 13:44:04,372 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:44:19] 2025-06-04 13:44:04,372 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:44:19] 2025-06-04 13:44:04,372 | INFO     | job 6679003535 has completed (purged errors)
[2025-06-04 09:44:19] 2025-06-04 13:44:04,372 | INFO     | overall cleanup function is called
[2025-06-04 09:44:19] 2025-06-04 13:44:05,380 | INFO     | --- collectZombieJob: --- 10, [199459]
[2025-06-04 09:44:19] 2025-06-04 13:44:05,380 | INFO     | zombie collector waiting for pid 199459
[2025-06-04 09:44:19] 2025-06-04 13:44:05,380 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:44:19] 2025-06-04 13:44:05,380 | INFO     | collected zombie processes
[2025-06-04 09:44:19] 2025-06-04 13:44:05,380 | INFO     | will attempt to kill all subprocesses of pid=199459
[2025-06-04 09:44:19] 2025-06-04 13:44:05,697 | INFO     | process IDs to be killed: [199459] (in reverse order)
[2025-06-04 09:44:19] 2025-06-04 13:44:05,825 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:44:19] 2025-06-04 13:44:05,826 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:44:19] 2025-06-04 13:44:05,841 | INFO     | did not find any defunct processes belonging to 199459
[2025-06-04 09:44:19] 2025-06-04 13:44:05,857 | INFO     | did not find any defunct processes belonging to 199459
[2025-06-04 09:44:19] 2025-06-04 13:44:05,857 | INFO     | ready for new job
[2025-06-04 09:44:19] 2025-06-04 13:44:05,857 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:44:19] 2025-06-04 13:44:05,858 | INFO     | **************************************
[2025-06-04 09:44:19] 2025-06-04 13:44:05,858 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:44:19] 2025-06-04 13:44:05,858 | INFO     | **************************************
[2025-06-04 09:44:19] 2025-06-04 13:44:05,858 | INFO     | 
[2025-06-04 09:44:19] 2025-06-04 13:44:05,874 | INFO     | architecture information:
[2025-06-04 09:44:19] 2025-06-04 13:44:05,875 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:44:19] 2025-06-04 13:44:05,891 | INFO     | cat /etc/os-release:
[2025-06-04 09:44:19] NAME="CentOS Linux"
[2025-06-04 09:44:19] VERSION="7 (Core)"
[2025-06-04 09:44:19] ID="centos"
[2025-06-04 09:44:19] ID_LIKE="rhel fedora"
[2025-06-04 09:44:19] VERSION_ID="7"
[2025-06-04 09:44:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:44:19] ANSI_COLOR="0;31"
[2025-06-04 09:44:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:44:19] HOME_URL="https://www.centos.org/"
[2025-06-04 09:44:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:44:19] 
[2025-06-04 09:44:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:44:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:44:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:44:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:44:19] 
[2025-06-04 09:44:19] 2025-06-04 13:44:05,892 | INFO     | **************************************
[2025-06-04 09:44:19] 2025-06-04 13:44:06,394 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 09:44:19] 2025-06-04 13:44:06,408 | INFO     | sufficient remaining disk space (85982183424 B)
[2025-06-04 09:44:19] 2025-06-04 13:44:06,408 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:44:19] 2025-06-04 13:44:06,409 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:44:19] 2025-06-04 13:44:06,409 | INFO     | update_server=False
[2025-06-04 09:44:19] 2025-06-04 13:44:06,409 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:44:19] 2025-06-04 13:44:06,409 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:44:19] 2025-06-04 13:44:06,409 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:44:19] 2025-06-04 13:44:06,409 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:44:19] 2025-06-04 13:44:06,410 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:44:19] 2025-06-04 13:44:06,410 | INFO     | aborting loop
[2025-06-04 09:44:19] 2025-06-04 13:44:06,410 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:44:19] 2025-06-04 13:44:06,411 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:44:19] 2025-06-04 13:44:06,624 | INFO     | all data control threads have been joined
[2025-06-04 09:44:19] 2025-06-04 13:44:07,243 | INFO     | all job control threads have been joined
[2025-06-04 09:44:19] 2025-06-04 13:44:07,413 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:44:19] 2025-06-04 13:44:07,416 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:44:19] 2025-06-04 13:44:07,557 | INFO     | all payload control threads have been joined
[2025-06-04 09:44:19] 2025-06-04 13:44:07,629 | INFO     | [data] control thread has finished
[2025-06-04 09:44:19] 2025-06-04 13:44:07,895 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:44:19] 2025-06-04 13:44:07,955 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:44:19] 2025-06-04 13:44:08,241 | INFO     | [job] validate thread has finished
[2025-06-04 09:44:19] 2025-06-04 13:44:08,247 | INFO     | [job] control thread has finished
[2025-06-04 09:44:19] 2025-06-04 13:44:08,302 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:44:19] 2025-06-04 13:44:08,394 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:44:19] 2025-06-04 13:44:08,414 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:44:19] 2025-06-04 13:44:08,414 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:44:19] 2025-06-04 13:44:08,561 | INFO     | [payload] control thread has finished
[2025-06-04 09:44:19] 2025-06-04 13:44:08,586 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:44:19] 2025-06-04 13:44:08,614 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:44:19] 2025-06-04 13:44:08,908 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:44:19] 2025-06-04 13:44:08,973 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:44:19] 2025-06-04 13:44:09,976 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:44:19] 2025-06-04 13:44:12,620 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:44:19] 2025-06-04 13:44:13,893 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139685307180864)>', '<ExcThread(monitor, started 139684667709184)>']
[2025-06-04 09:44:19] 2025-06-04 13:44:14,450 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:44:19] 2025-06-04 13:44:14,450 | INFO     | [monitor] control thread has ended
[2025-06-04 09:44:19] 2025-06-04 13:44:18,918 | INFO     | all workflow threads have been joined
[2025-06-04 09:44:19] 2025-06-04 13:44:18,918 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:44:19] 2025-06-04 13:44:18,919 | INFO     | traces error code: 0
[2025-06-04 09:44:19] 2025-06-04 13:44:18,919 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:44:19] 2025-06-04 13:44:19,017 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:44:19] 2025-06-04 13:44:19,020 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:44:19] 2025-06-04 13:44:19,023 [wrapper] pilotpid: 192344
[2025-06-04 09:44:19] 2025-06-04 13:44:19,027 [wrapper] Pilot exit status: 0
[2025-06-04 09:44:19] 2025-06-04 13:44:19,038 [wrapper] pandaids: 6679003535
[2025-06-04 09:44:19] 2025-06-04 13:44:19,126 [wrapper] cleanup supervisor_pilot  515087 192345
[2025-06-04 09:44:19] 2025-06-04 13:44:19,129 [wrapper] Test setup, not cleaning
[2025-06-04 09:44:19] 2025-06-04 13:44:19,132 [wrapper] apfmon messages muted
[2025-06-04 09:44:19] 2025-06-04 13:44:19,135 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:44:19] 2025-06-04 13:44:19,137 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:44:19]  *** Error codes and diagnostics ***
[2025-06-04 09:44:19]     "exeErrorCode": 0,
[2025-06-04 09:44:19]     "exeErrorDiag": "",
[2025-06-04 09:44:19]     "pilotErrorCode": 0,
[2025-06-04 09:44:19]     "pilotErrorDiag": "",
[2025-06-04 09:44:19]  *** Listing of results directory ***
[2025-06-04 09:44:19] total 390620
[2025-06-04 09:44:19] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:31 pilot3.tar.gz
[2025-06-04 09:44:19] -rwx------. 1 boincer umatlas     37140 Jun  4 04:41 runpilot2-wrapper.sh
[2025-06-04 09:44:19] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:41 queuedata.json
[2025-06-04 09:44:19] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:44:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:42 run_atlas
[2025-06-04 09:44:19] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:42 job.xml
[2025-06-04 09:44:19] -rw-r--r--. 2 boincer umatlas 215966362 Jun  4 08:42 EVNT.45006593._001019.pool.root.1
[2025-06-04 09:44:19] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:42 start_atlas.sh
[2025-06-04 09:44:19] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:42 shared
[2025-06-04 09:44:19] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 08:42 input.tar.gz
[2025-06-04 09:44:19] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:42 boinc_lockfile
[2025-06-04 09:44:19] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 08:42 pandaJob.out
[2025-06-04 09:44:19] -rw-------. 1 boincer umatlas    986811 Jun  4 08:42 agis_schedconf.cvmfs.json
[2025-06-04 09:44:19] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:42 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:44:19] drwx------. 4 boincer umatlas      4096 Jun  4 08:42 pilot3
[2025-06-04 09:44:19] -rw-r--r--. 1 boincer umatlas      6897 Jun  4 09:40 init_data.xml
[2025-06-04 09:44:19] -rw-------. 1 boincer umatlas 178861293 Jun  4 09:43 HITS.45006595._055769.pool.root.1
[2025-06-04 09:44:19] -rw-r--r--. 1 boincer umatlas       529 Jun  4 09:43 boinc_task_state.xml
[2025-06-04 09:44:19] -rw-------. 1 boincer umatlas        95 Jun  4 09:43 pilot_heartbeat.json
[2025-06-04 09:44:19] -rw-------. 1 boincer umatlas      1026 Jun  4 09:43 memory_monitor_summary.json
[2025-06-04 09:44:19] -rw-------. 1 boincer umatlas    289757 Jun  4 09:43 log.45006595._055769.job.log.tgz.1
[2025-06-04 09:44:19] -rw-------. 1 boincer umatlas      7683 Jun  4 09:44 heartbeat.json
[2025-06-04 09:44:19] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:44 boinc_mmap_file
[2025-06-04 09:44:19] -rw-r--r--. 1 boincer umatlas        27 Jun  4 09:44 wrapper_checkpoint.txt
[2025-06-04 09:44:19] -rw-------. 1 boincer umatlas      4476 Jun  4 09:44 pilotlog.txt
[2025-06-04 09:44:19] -rw-------. 1 boincer umatlas    375528 Jun  4 09:44 log.45006595._055769.job.log.1
[2025-06-04 09:44:19] -rw-------. 1 boincer umatlas       357 Jun  4 09:44 output.list
[2025-06-04 09:44:19] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:44 runtime_log
[2025-06-04 09:44:19] -rw-------. 1 boincer umatlas    686080 Jun  4 09:44 result.tar.gz
[2025-06-04 09:44:19] -rw-------. 1 boincer umatlas       651 Jun  4 09:44 SGvLDm3ryg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmZyaKDmvIDdum.diag
[2025-06-04 09:44:19] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 09:44 runtime_log.err
[2025-06-04 09:44:19] -rw-r--r--. 1 boincer umatlas     21501 Jun  4 09:44 stderr.txt
[2025-06-04 09:44:19] HITS file was successfully produced:
[2025-06-04 09:44:19] -rw-------. 1 boincer umatlas 178861293 Jun  4 09:43 shared/HITS.pool.root.1
[2025-06-04 09:44:19]  *** Contents of shared directory: ***
[2025-06-04 09:44:19] total 386776
[2025-06-04 09:44:19] -rw-r--r--. 2 boincer umatlas 215966362 Jun  4 08:42 ATLAS.root_0
[2025-06-04 09:44:19] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:42 start_atlas.sh
[2025-06-04 09:44:19] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 08:42 input.tar.gz
[2025-06-04 09:44:19] -rw-------. 1 boincer umatlas 178861293 Jun  4 09:43 HITS.pool.root.1
[2025-06-04 09:44:19] -rw-------. 1 boincer umatlas    686080 Jun  4 09:44 result.tar.gz
09:44:20 (187374): run_atlas exited; CPU time 24068.468643
09:44:20 (187374): called boinc_finish(0)

</stderr_txt>
]]>

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