Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:10:30 (21156): wrapper (7.7.26015): starting
03:10:30 (21156): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 03:10:30] Arguments: --nthreads 8
[2025-06-05 03:10:30] Threads: 8
[2025-06-05 03:10:30] Checking for CVMFS
[2025-06-05 03:10:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 03:10:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 03:10:33] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 03:10:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 03:10:34] 2.11.2.0 16160 33989 92664 146799 2 246 20148340 25165825 3632 130560 0 18039119 99.797 20684295 2241 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 03:10:34] CVMFS is ok
[2025-06-05 03:10:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 03:10:34] Checking for apptainer binary...
[2025-06-05 03:10:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 03:10:34] Running /usr/bin/apptainer --version
[2025-06-05 03:10:34] apptainer version 1.3.2-1.el7
[2025-06-05 03:10:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 03:10:45] cg-vwn457.simple-grid.lan
[2025-06-05 03:10:45] apptainer works
[2025-06-05 03:10:45] Set ATHENA_PROC_NUMBER=8
[2025-06-05 03:10:45] Set ATHENA_CORE_NUMBER=8
[2025-06-05 03:10:46] Starting ATLAS job with PandaID=6679003537
[2025-06-05 03:10:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 06:51:01]  *** The last 200 lines of the pilot log: ***
[2025-06-05 06:51:01] 2025-06-05 04:38:23,368 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 06:51:01] 2025-06-05 04:38:23,368 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 06:51:01] 2025-06-05 04:38:23,369 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 06:51:01] 2025-06-05 04:38:23,376 | INFO     | fitting pss+swap vs Time
[2025-06-05 06:51:01] 2025-06-05 04:38:23,377 | INFO     | sum of square deviations: 2555770710.5
[2025-06-05 06:51:01] 2025-06-05 04:38:23,378 | INFO     | sum of deviations: -8650182012.499996
[2025-06-05 06:51:01] 2025-06-05 04:38:23,379 | INFO     | mean x: 1749092068.5
[2025-06-05 06:51:01] 2025-06-05 04:38:23,379 | INFO     | mean y: 2489789.995049505
[2025-06-05 06:51:01] 2025-06-05 04:38:23,379 | INFO     | -- intersect: 5922412374.202594
[2025-06-05 06:51:01] 2025-06-05 04:38:23,379 | INFO     | intersect: 5922412374.202594
[2025-06-05 06:51:01] 2025-06-05 04:38:23,379 | INFO     | chi2: 2.517080932807474
[2025-06-05 06:51:01] 2025-06-05 04:38:23,380 | INFO     | sum of square deviations: 2370641658.0
[2025-06-05 06:51:01] 2025-06-05 04:38:23,381 | INFO     | sum of deviations: 4853147556.000007
[2025-06-05 06:51:01] 2025-06-05 04:38:23,381 | INFO     | mean x: 1749091916.0
[2025-06-05 06:51:01] 2025-06-05 04:38:23,381 | INFO     | mean y: 2500693.350253807
[2025-06-05 06:51:01] 2025-06-05 04:38:23,381 | INFO     | -- intersect: -3578218108.54417
[2025-06-05 06:51:01] 2025-06-05 04:38:23,381 | INFO     | intersect: -3578218108.54417
[2025-06-05 06:51:01] 2025-06-05 04:38:23,382 | INFO     | chi2: 1.7527380866310232
[2025-06-05 06:51:01] 2025-06-05 04:38:23,382 | INFO     | current chi2=1.7527380866310232 (change=30.366240362558646 %)
[2025-06-05 06:51:01] 2025-06-05 04:38:23,382 | INFO     | sum of square deviations: 2194675568.0
[2025-06-05 06:51:01] 2025-06-05 04:38:23,383 | INFO     | sum of deviations: 4816133884.5000105
[2025-06-05 06:51:01] 2025-06-05 04:38:23,384 | INFO     | mean x: 1749091763.5
[2025-06-05 06:51:01] 2025-06-05 04:38:23,384 | INFO     | mean y: 2500661.3802083335
[2025-06-05 06:51:01] 2025-06-05 04:38:23,384 | INFO     | -- intersect: -3835816141.3939085
[2025-06-05 06:51:01] 2025-06-05 04:38:23,384 | INFO     | intersect: -3835816141.3939085
[2025-06-05 06:51:01] 2025-06-05 04:38:23,384 | INFO     | chi2: 1.7533875114053694
[2025-06-05 06:51:01] 2025-06-05 04:38:23,384 | INFO     | current chi2=1.7533875114053694 (change=-0.03705201474765332 %)
[2025-06-05 06:51:01] 2025-06-05 04:38:23,384 | INFO     | right removable region: 191
[2025-06-05 06:51:01] 2025-06-05 04:38:23,385 | INFO     | sum of square deviations: 2370641658.0
[2025-06-05 06:51:01] 2025-06-05 04:38:23,386 | INFO     | sum of deviations: -43261538671.99999
[2025-06-05 06:51:01] 2025-06-05 04:38:23,386 | INFO     | mean x: 1749092221.0
[2025-06-05 06:51:01] 2025-06-05 04:38:23,386 | INFO     | mean y: 2518029.6345177665
[2025-06-05 06:51:01] 2025-06-05 04:38:23,386 | INFO     | -- intersect: 31921479929.394512
[2025-06-05 06:51:01] 2025-06-05 04:38:23,386 | INFO     | intersect: 31921479929.394512
[2025-06-05 06:51:01] 2025-06-05 04:38:23,395 | INFO     | chi2: 0.8814186747829487
[2025-06-05 06:51:01] 2025-06-05 04:38:23,395 | INFO     | current chi2=0.8814186747829487 (change=64.98250559628046 %)
[2025-06-05 06:51:01] 2025-06-05 04:38:23,395 | INFO     | sum of square deviations: 2194675568.0
[2025-06-05 06:51:01] 2025-06-05 04:38:23,397 | INFO     | sum of deviations: -42982722098.499985
[2025-06-05 06:51:01] 2025-06-05 04:38:23,397 | INFO     | mean x: 1749092373.5
[2025-06-05 06:51:01] 2025-06-05 04:38:23,397 | INFO     | mean y: 2517754.6510416665
[2025-06-05 06:51:01] 2025-06-05 04:38:23,397 | INFO     | -- intersect: 34258492765.69479
[2025-06-05 06:51:01] 2025-06-05 04:38:23,397 | INFO     | intersect: 34258492765.69479
[2025-06-05 06:51:01] 2025-06-05 04:38:23,397 | INFO     | chi2: 0.8674480414626834
[2025-06-05 06:51:01] 2025-06-05 04:38:23,397 | INFO     | current chi2=0.8674480414626834 (change=1.585016714526223 %)
[2025-06-05 06:51:01] 2025-06-05 04:38:23,397 | INFO     | left removable region: 20
[2025-06-05 06:51:01] 2025-06-05 04:38:23,398 | INFO     | sum of square deviations: 1550429070.0
[2025-06-05 06:51:01] 2025-06-05 04:38:23,399 | INFO     | sum of deviations: -22760161521.999996
[2025-06-05 06:51:01] 2025-06-05 04:38:23,399 | INFO     | mean x: 1749092343.0
[2025-06-05 06:51:01] 2025-06-05 04:38:23,399 | INFO     | mean y: 2524973.847953216
[2025-06-05 06:51:01] 2025-06-05 04:38:23,399 | INFO     | -- intersect: 25679045760.170296
[2025-06-05 06:51:01] 2025-06-05 04:38:23,399 | INFO     | intersect: 25679045760.170296
[2025-06-05 06:51:01] 2025-06-05 04:38:23,400 | INFO     | chi2: 0.0717894265943696
[2025-06-05 06:51:01] 2025-06-05 04:38:23,400 | INFO     | -- intersect: 25679045760.170296
[2025-06-05 06:51:01] 2025-06-05 04:38:23,400 | INFO     | current memory leak: -14.68 B/s (using 171 data points, chi2=0.07)
[2025-06-05 06:51:01] 2025-06-05 04:38:23,401 | INFO     | ..............................
[2025-06-05 06:51:01] 2025-06-05 04:38:23,401 | INFO     | . Timing measurements:
[2025-06-05 06:51:01] 2025-06-05 04:38:23,401 | INFO     | . get job = 0 s
[2025-06-05 06:51:01] 2025-06-05 04:38:23,401 | INFO     | . initial setup = 4 s
[2025-06-05 06:51:01] 2025-06-05 04:38:23,401 | INFO     | . payload setup = 15 s
[2025-06-05 06:51:01] 2025-06-05 04:38:23,401 | INFO     | . stage-in = 0 s
[2025-06-05 06:51:01] 2025-06-05 04:38:23,401 | INFO     | . payload execution = 12294 s
[2025-06-05 06:51:01] 2025-06-05 04:38:23,401 | INFO     | . stage-out = 4 s
[2025-06-05 06:51:01] 2025-06-05 04:38:23,401 | INFO     | . log creation = 0 s
[2025-06-05 06:51:01] 2025-06-05 04:38:23,402 | INFO     | ..............................
[2025-06-05 06:51:01] 2025-06-05 04:38:23,543 | INFO     | 
[2025-06-05 06:51:01] 2025-06-05 04:38:23,544 | INFO     | job summary report
[2025-06-05 06:51:01] 2025-06-05 04:38:23,544 | INFO     | --------------------------------------------------
[2025-06-05 06:51:01] 2025-06-05 04:38:23,544 | INFO     | PanDA job id: 6679003537
[2025-06-05 06:51:01] 2025-06-05 04:38:23,544 | INFO     | task id: 45006595
[2025-06-05 06:51:01] 2025-06-05 04:38:23,544 | INFO     | errors: (none)
[2025-06-05 06:51:01] 2025-06-05 04:38:23,544 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 06:51:01] 2025-06-05 04:38:23,544 | INFO     | pilot state: finished 
[2025-06-05 06:51:01] 2025-06-05 04:38:23,544 | INFO     | transexitcode: 0
[2025-06-05 06:51:01] 2025-06-05 04:38:23,544 | INFO     | exeerrorcode: 0
[2025-06-05 06:51:01] 2025-06-05 04:38:23,544 | INFO     | exeerrordiag: 
[2025-06-05 06:51:01] 2025-06-05 04:38:23,544 | INFO     | exitcode: 0
[2025-06-05 06:51:01] 2025-06-05 04:38:23,544 | INFO     | exitmsg: OK
[2025-06-05 06:51:01] 2025-06-05 04:38:23,545 | INFO     | cpuconsumptiontime: 46309 s
[2025-06-05 06:51:01] 2025-06-05 04:38:23,545 | INFO     | nevents: 400
[2025-06-05 06:51:01] 2025-06-05 04:38:23,545 | INFO     | neventsw: 0
[2025-06-05 06:51:01] 2025-06-05 04:38:23,545 | INFO     | pid: 1339
[2025-06-05 06:51:01] 2025-06-05 04:38:23,545 | INFO     | pgrp: 1339
[2025-06-05 06:51:01] 2025-06-05 04:38:23,545 | INFO     | corecount: 8
[2025-06-05 06:51:01] 2025-06-05 04:38:23,545 | INFO     | event service: False
[2025-06-05 06:51:01] 2025-06-05 04:38:23,545 | INFO     | sizes: {0: 2397122, 1: 2397321, 9: 2397527, 12: 2397555, 12313: 2426638, 12318: 2435581, 12319: 2435765, 12408: 2435935}
[2025-06-05 06:51:01] 2025-06-05 04:38:23,545 | INFO     | --------------------------------------------------
[2025-06-05 06:51:01] 2025-06-05 04:38:23,545 | INFO     | 
[2025-06-05 06:51:01] 2025-06-05 04:38:23,545 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-06-05 06:51:01] 2025-06-05 04:38:23,978 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 06:51:01] 2025-06-05 04:38:23,979 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 06:51:01] 2025-06-05 04:38:23,979 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 06:51:01] 2025-06-05 04:38:23,979 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 06:51:01] 2025-06-05 04:38:23,979 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 06:51:01] 2025-06-05 04:38:23,979 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 06:51:01] 2025-06-05 04:38:23,979 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 06:51:01] 2025-06-05 04:38:23,979 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 06:51:01] 2025-06-05 04:38:23,979 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 06:51:01] 2025-06-05 04:38:23,980 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 06:51:01] 2025-06-05 04:38:23,980 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 06:51:01] 2025-06-05 04:38:23,980 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 06:51:01] 2025-06-05 04:38:23,980 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 06:51:01] 2025-06-05 04:38:23,980 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 06:51:01] 2025-06-05 04:38:23,980 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 06:51:01] 2025-06-05 04:38:23,980 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 06:51:01] 2025-06-05 04:38:23,980 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 06:51:01] 2025-06-05 04:38:23,980 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 06:51:01] 2025-06-05 04:38:23,980 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 06:51:01] 2025-06-05 04:38:23,980 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 06:51:01] 2025-06-05 04:38:23,980 | INFO     | job 6679003537 has completed (purged errors)
[2025-06-05 06:51:01] 2025-06-05 04:38:23,981 | INFO     | overall cleanup function is called
[2025-06-05 06:51:01] 2025-06-05 04:38:24,990 | INFO     | --- collectZombieJob: --- 10, [1339]
[2025-06-05 06:51:01] 2025-06-05 04:38:24,990 | INFO     | zombie collector waiting for pid 1339
[2025-06-05 06:51:01] 2025-06-05 04:38:24,990 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 06:51:01] 2025-06-05 04:38:24,991 | INFO     | collected zombie processes
[2025-06-05 06:51:01] 2025-06-05 04:38:24,991 | INFO     | will attempt to kill all subprocesses of pid=1339
[2025-06-05 06:51:01] 2025-06-05 04:38:25,078 | INFO     | process IDs to be killed: [1339] (in reverse order)
[2025-06-05 06:51:01] 2025-06-05 04:38:25,860 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 06:51:01] 2025-06-05 04:38:25,861 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 06:51:01] 2025-06-05 04:38:25,864 | INFO     | did not find any defunct processes belonging to 1339
[2025-06-05 06:51:01] 2025-06-05 04:38:25,867 | INFO     | did not find any defunct processes belonging to 1339
[2025-06-05 06:51:01] 2025-06-05 04:38:25,868 | INFO     | ready for new job
[2025-06-05 06:51:01] 2025-06-05 04:38:25,868 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 06:51:01] 2025-06-05 04:38:25,870 | INFO     | **************************************
[2025-06-05 06:51:01] 2025-06-05 04:38:25,870 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 06:51:01] 2025-06-05 04:38:25,870 | INFO     | **************************************
[2025-06-05 06:51:01] 2025-06-05 04:38:25,870 | INFO     | 
[2025-06-05 06:51:01] 2025-06-05 04:38:25,871 | INFO     | pilot is running in a VM
[2025-06-05 06:51:01] 2025-06-05 04:38:25,871 | INFO     | architecture information:
[2025-06-05 06:51:01] 2025-06-05 04:38:25,880 | INFO     | executing command: cat /etc/os-release
[2025-06-05 06:51:01] 2025-06-05 04:38:26,028 | INFO     | cat /etc/os-release:
[2025-06-05 06:51:01] NAME="CentOS Linux"
[2025-06-05 06:51:01] VERSION="7 (Core)"
[2025-06-05 06:51:01] ID="centos"
[2025-06-05 06:51:01] ID_LIKE="rhel fedora"
[2025-06-05 06:51:01] VERSION_ID="7"
[2025-06-05 06:51:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 06:51:01] ANSI_COLOR="0;31"
[2025-06-05 06:51:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 06:51:01] HOME_URL="https://www.centos.org/"
[2025-06-05 06:51:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 06:51:01] 
[2025-06-05 06:51:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 06:51:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 06:51:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 06:51:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 06:51:01] 
[2025-06-05 06:51:01] 2025-06-05 04:38:26,028 | INFO     | **************************************
[2025-06-05 06:51:01] 2025-06-05 04:38:26,532 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-06-05 06:51:01] 2025-06-05 04:38:26,694 | INFO     | sufficient remaining disk space (496866689024 B)
[2025-06-05 06:51:01] 2025-06-05 04:38:26,694 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 06:51:01] 2025-06-05 04:38:26,695 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 06:51:01] 2025-06-05 04:38:26,695 | INFO     | update_server=False
[2025-06-05 06:51:01] 2025-06-05 04:38:26,695 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 06:51:01] 2025-06-05 04:38:26,696 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 06:51:01] 2025-06-05 04:38:26,696 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 06:51:01] 2025-06-05 04:38:26,697 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 06:51:01] 2025-06-05 04:38:26,697 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 06:51:01] 2025-06-05 04:38:26,697 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 06:51:01] 2025-06-05 04:38:26,816 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 06:51:01] 2025-06-05 04:38:26,816 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 06:51:01] 2025-06-05 04:38:26,816 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:51:01] 2025-06-05 04:38:26,816 | INFO     | will abort loop
[2025-06-05 06:51:01] 2025-06-05 04:38:26,985 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 06:51:01] 2025-06-05 04:38:27,206 | INFO     | all payload control threads have been joined
[2025-06-05 06:51:01] 2025-06-05 04:38:27,307 | INFO     | all job control threads have been joined
[2025-06-05 06:51:01] 2025-06-05 04:38:27,466 | INFO     | all data control threads have been joined
[2025-06-05 06:51:01] 2025-06-05 04:38:27,702 | INFO     | [job] retrieve thread has finished
[2025-06-05 06:51:01] 2025-06-05 04:38:27,819 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 06:51:01] 2025-06-05 04:38:27,823 | INFO     | [job] job monitor thread has finished
[2025-06-05 06:51:01] 2025-06-05 04:38:28,011 | INFO     | [data] copytool_in thread has finished
[2025-06-05 06:51:01] 2025-06-05 04:38:28,016 | INFO     | [job] validate thread has finished
[2025-06-05 06:51:01] 2025-06-05 04:38:28,094 | INFO     | [payload] failed_post thread has finished
[2025-06-05 06:51:01] 2025-06-05 04:38:28,098 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 06:51:01] 2025-06-05 04:38:28,212 | INFO     | [payload] control thread has finished
[2025-06-05 06:51:01] 2025-06-05 04:38:28,240 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 06:51:01] 2025-06-05 04:38:28,294 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 06:51:01] 2025-06-05 04:38:28,314 | INFO     | [job] control thread has finished
[2025-06-05 06:51:01] 2025-06-05 04:38:28,391 | INFO     | [payload] validate_post thread has finished
[2025-06-05 06:51:01] 2025-06-05 04:38:28,472 | INFO     | [data] control thread has finished
[2025-06-05 06:51:01] 2025-06-05 04:38:28,557 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:51:01] 2025-06-05 04:38:28,992 | INFO     | [data] copytool_out thread has finished
[2025-06-05 06:51:01] 2025-06-05 04:38:29,564 | INFO     | [job] queue monitor thread has finished
[2025-06-05 06:51:01] 2025-06-05 04:38:30,705 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 06:51:01] 2025-06-05 04:38:31,482 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139730656376640)>', '<ExcThread(monitor, started 139730201057024)>']
[2025-06-05 06:51:01] 2025-06-05 04:38:31,726 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 06:51:01] 2025-06-05 04:38:31,726 | INFO     | [monitor] control thread has ended
[2025-06-05 06:51:01] 2025-06-05 04:38:36,508 | INFO     | all workflow threads have been joined
[2025-06-05 06:51:01] 2025-06-05 04:38:36,508 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 06:51:01] 2025-06-05 04:38:36,509 | INFO     | traces error code: 0
[2025-06-05 06:51:01] 2025-06-05 04:38:36,509 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 06:51:01] 2025-06-05 04:38:36,863 [wrapper] ==== pilot stdout END ====
[2025-06-05 06:51:01] 2025-06-05 04:38:37,001 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 06:51:01] 2025-06-05 04:38:37,096 [wrapper] pilotpid: 26288
[2025-06-05 06:51:01] 2025-06-05 04:38:37,180 [wrapper] Pilot exit status: 0
[2025-06-05 06:51:01] 2025-06-05 04:38:37,559 [wrapper] pandaids: 6679003537
[2025-06-05 06:51:01] 2025-06-05 04:38:38,264 [wrapper] cleanup supervisor_pilot 15561 26289
[2025-06-05 06:51:01] 2025-06-05 04:38:38,344 [wrapper] Test setup, not cleaning
[2025-06-05 06:51:01] 2025-06-05 04:38:38,405 [wrapper] apfmon messages muted
[2025-06-05 06:51:01] 2025-06-05 04:38:38,462 [wrapper] ==== wrapper stdout END ====
[2025-06-05 06:51:01] 2025-06-05 04:38:38,517 [wrapper] ==== wrapper stderr END ====
[2025-06-05 06:51:01]  *** Error codes and diagnostics ***
[2025-06-05 06:51:01]     "exeErrorCode": 0,
[2025-06-05 06:51:01]     "exeErrorDiag": "",
[2025-06-05 06:51:01]     "pilotErrorCode": 0,
[2025-06-05 06:51:01]     "pilotErrorDiag": "",
[2025-06-05 06:51:01]  *** Listing of results directory ***
[2025-06-05 06:51:01] total 392316
[2025-06-05 06:51:01] -rw-r--r--. 1 boinc boinc    495897 Jun  4 10:31 pilot3.tar.gz
[2025-06-05 06:51:01] -rwx------. 1 boinc boinc     37140 Jun  4 10:41 runpilot2-wrapper.sh
[2025-06-05 06:51:01] -rw-r--r--. 1 boinc boinc      5111 Jun  4 10:41 queuedata.json
[2025-06-05 06:51:01] -rw-r--r--. 1 boinc boinc       100 Jun  5 03:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 06:51:01] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 03:10 run_atlas
[2025-06-05 06:51:01] -rw-r--r--. 1 boinc boinc       105 Jun  5 03:10 job.xml
[2025-06-05 06:51:01] -rw-r--r--. 2 boinc boinc 213716270 Jun  5 03:10 EVNT.45006593._001251.pool.root.1
[2025-06-05 06:51:01] -rw-r--r--. 2 boinc boinc     15093 Jun  5 03:10 start_atlas.sh
[2025-06-05 06:51:01] drwxrwx--x. 2 boinc boinc        68 Jun  5 03:10 shared
[2025-06-05 06:51:01] -rw-r--r--. 2 boinc boinc    508880 Jun  5 03:10 input.tar.gz
[2025-06-05 06:51:01] -rw-r--r--. 1 boinc boinc      6391 Jun  5 03:10 init_data.xml
[2025-06-05 06:51:01] -rw-r--r--. 1 boinc boinc         0 Jun  5 03:10 boinc_lockfile
[2025-06-05 06:51:01] -rw-r--r--. 1 boinc boinc      2525 Jun  5 03:10 pandaJob.out
[2025-06-05 06:51:01] -rw-------. 1 boinc boinc    987117 Jun  5 03:11 agis_schedconf.cvmfs.json
[2025-06-05 06:51:01] drwx------. 4 boinc boinc      4096 Jun  5 03:11 pilot3
[2025-06-05 06:51:01] -rw-------. 1 boinc boinc 181289828 Jun  5 06:35 HITS.45006595._055771.pool.root.1
[2025-06-05 06:51:01] -rw-r--r--. 1 boinc boinc       531 Jun  5 06:35 boinc_task_state.xml
[2025-06-05 06:51:01] -rw-------. 1 boinc boinc      1018 Jun  5 06:36 memory_monitor_summary.json
[2025-06-05 06:51:01] -rw-------. 1 boinc boinc   1598969 Jun  5 06:36 agis_ddmendpoints.agis.ALL.json
[2025-06-05 06:51:01] -rw-------. 1 boinc boinc    375895 Jun  5 06:36 log.45006595._055771.job.log.tgz.1
[2025-06-05 06:51:01] -rw-------. 1 boinc boinc        95 Jun  5 06:38 pilot_heartbeat.json
[2025-06-05 06:51:01] -rw-------. 1 boinc boinc      7692 Jun  5 06:38 heartbeat.json
[2025-06-05 06:51:01] -rw-------. 1 boinc boinc      4726 Jun  5 06:38 pilotlog.txt
[2025-06-05 06:51:01] -rw-------. 1 boinc boinc   1080646 Jun  5 06:38 log.45006595._055771.job.log.1
[2025-06-05 06:51:01] -rw-------. 1 boinc boinc       357 Jun  5 06:38 output.list
[2025-06-05 06:51:01] -rw-r--r--. 1 boinc boinc       620 Jun  5 06:38 runtime_log
[2025-06-05 06:51:01] -rw-------. 1 boinc boinc   1474560 Jun  5 06:38 result.tar.gz
[2025-06-05 06:51:01] -rw-r--r--. 1 boinc boinc      8673 Jun  5 06:38 runtime_log.err
[2025-06-05 06:51:01] -rw-------. 1 boinc boinc       657 Jun  5 06:38 PVzLDm3ryg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmbyaKDmItklJm.diag
[2025-06-05 06:51:01] -rw-r--r--. 1 boinc boinc      8192 Jun  5 06:51 boinc_mmap_file
[2025-06-05 06:51:01] -rw-r--r--. 1 boinc boinc        28 Jun  5 06:51 wrapper_checkpoint.txt
[2025-06-05 06:51:01] -rw-r--r--. 1 boinc boinc     20501 Jun  5 06:51 stderr.txt
[2025-06-05 06:51:01] HITS file was successfully produced:
[2025-06-05 06:51:02] -rw-------. 1 boinc boinc 181289828 Jun  5 06:35 shared/HITS.pool.root.1
[2025-06-05 06:51:02]  *** Contents of shared directory: ***
[2025-06-05 06:51:02] total 387708
[2025-06-05 06:51:02] -rw-r--r--. 2 boinc boinc 213716270 Jun  5 03:10 ATLAS.root_0
[2025-06-05 06:51:02] -rw-r--r--. 2 boinc boinc     15093 Jun  5 03:10 start_atlas.sh
[2025-06-05 06:51:02] -rw-r--r--. 2 boinc boinc    508880 Jun  5 03:10 input.tar.gz
[2025-06-05 06:51:02] -rw-------. 1 boinc boinc 181289828 Jun  5 06:35 HITS.pool.root.1
[2025-06-05 06:51:02] -rw-------. 1 boinc boinc   1474560 Jun  5 06:38 result.tar.gz
06:51:03 (21156): run_atlas exited; CPU time 46442.772342
06:51:03 (21156): called boinc_finish(0)

</stderr_txt>
]]>

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