Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:42:52 (3970563): wrapper (7.7.26015): starting
08:42:52 (3970563): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:42:52] Arguments: --nthreads 8
[2025-06-04 08:42:52] Threads: 8
[2025-06-04 08:42:52] Checking for CVMFS
[2025-06-04 08:42:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:42:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:42:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:42:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:42:52] 2.12.6.0 10171 31492 511444 146780 2 201 31148918 32935936 9822 16776704 2 141520218 99.708 112968808 25678 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:42:52] CVMFS is ok
[2025-06-04 08:42:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:42:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:42:52] Further information can be found at the LHC@home message board.
[2025-06-04 08:42:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:42:52] Checking for apptainer binary...
[2025-06-04 08:42:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:42:52] Running /usr/bin/apptainer --version
[2025-06-04 08:42:52] apptainer version 1.4.1-1.el9
[2025-06-04 08:42:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:42:52] c6-12-27-4.aglt2.org
[2025-06-04 08:42:52] apptainer works
[2025-06-04 08:42:52] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:42:52] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:42:52] Starting ATLAS job with PandaID=6678891421
[2025-06-04 08:42:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:40:07]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:40:07]  filetype=log
[2025-06-04 09:40:07]  guid=0fa60831-6b02-4187-9809-d83b15a0d470
[2025-06-04 09:40:07]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 09:40:07]  is_altstaged=None
[2025-06-04 09:40:07]  is_tar=False
[2025-06-04 09:40:07]  lfn=log.45006595._055668.job.log.tgz.1
[2025-06-04 09:40:07]  mtime=0
[2025-06-04 09:40:07]  protocol_id=None
[2025-06-04 09:40:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:40:07]  replicas=None
[2025-06-04 09:40:07]  scope=mc23_13p6TeV
[2025-06-04 09:40:07]  status=None
[2025-06-04 09:40:07]  status_code=0
[2025-06-04 09:40:07]  storage_token=
[2025-06-04 09:40:07]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678891421/log.45006595._055668.job.log.tgz.1
[2025-06-04 09:40:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/9b/log.45006595._055668.job.log.tgz.1
[2025-06-04 09:40:07]  workdir=None
[2025-06-04 09:40:07] ]
[2025-06-04 09:40:07] 2025-06-04 13:39:41,900 | INFO     | transferring file log.45006595._055668.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678891421/log.45006595._055668.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:40:07] 2025-06-04 13:39:41,901 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678891421/log.45006595._055668.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._055668.job
[2025-06-04 09:40:07] 2025-06-04 13:39:41,919 | INFO     | adding to output.list: log.45006595._055668.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/9b/log.45006595._055668.job.log.tg
[2025-06-04 09:40:07] 2025-06-04 13:39:41,920 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:40:07] 2025-06-04 13:39:41,921 | INFO     | summary of transferred files:
[2025-06-04 09:40:07] 2025-06-04 13:39:41,921 | INFO     |  -- lfn=log.45006595._055668.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:40:07] 2025-06-04 13:39:41,921 | INFO     | stage-out finished correctly
[2025-06-04 09:40:07] 2025-06-04 13:39:42,386 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:40:07] 2025-06-04 13:39:43,097 | INFO     | job 6678891421 has state=finished
[2025-06-04 09:40:07] 2025-06-04 13:39:43,097 | INFO     | preparing for final server update for job 6678891421 in state='finished'
[2025-06-04 09:40:07] 2025-06-04 13:39:43,098 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:40:07] 2025-06-04 13:39:43,098 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:40:07] 2025-06-04 13:39:43,098 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:40:07] 2025-06-04 13:39:43,099 | INFO     | job 6678891421 has finished - writing final server update
[2025-06-04 09:40:07] 2025-06-04 13:39:43,099 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:40:07] 2025-06-04 13:39:43,117 | INFO     | executing command: lscpu
[2025-06-04 09:40:07] 2025-06-04 13:39:43,202 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:40:07] 2025-06-04 13:39:46,333 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:40:07] 2025-06-04 13:39:46,334 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678891421/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:40:07] 2025-06-04 13:39:46,335 | INFO     | extracted standard info from prmon json
[2025-06-04 09:40:07] 2025-06-04 13:39:46,335 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:40:07] 2025-06-04 13:39:46,335 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:40:07] 2025-06-04 13:39:46,335 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:40:07] 2025-06-04 13:39:46,335 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:40:07] 2025-06-04 13:39:46,336 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:40:07] 2025-06-04 13:39:46,337 | INFO     | sum of square deviations: 36465800.0
[2025-06-04 09:40:07] 2025-06-04 13:39:46,337 | INFO     | sum of deviations: 4988802832.999999
[2025-06-04 09:40:07] 2025-06-04 13:39:46,337 | INFO     | mean x: 1749042773.0
[2025-06-04 09:40:07] 2025-06-04 13:39:46,337 | INFO     | mean y: 2163978.326530612
[2025-06-04 09:40:07] 2025-06-04 13:39:46,337 | INFO     | -- intersect: -239280384079.86978
[2025-06-04 09:40:07] 2025-06-04 13:39:46,337 | INFO     | intersect: -239280384079.86978
[2025-06-04 09:40:07] 2025-06-04 13:39:46,337 | INFO     | chi2: 0.8953950517175046
[2025-06-04 09:40:07] 2025-06-04 13:39:46,337 | INFO     | -- intersect: -239280384079.86978
[2025-06-04 09:40:07] 2025-06-04 13:39:46,337 | INFO     | current memory leak: 136.81 B/s (using 49 data points, chi2=0.90)
[2025-06-04 09:40:07] 2025-06-04 13:39:46,338 | INFO     | ..............................
[2025-06-04 09:40:07] 2025-06-04 13:39:46,338 | INFO     | . Timing measurements:
[2025-06-04 09:40:07] 2025-06-04 13:39:46,338 | INFO     | . get job = 0 s
[2025-06-04 09:40:07] 2025-06-04 13:39:46,338 | INFO     | . initial setup = 2 s
[2025-06-04 09:40:07] 2025-06-04 13:39:46,338 | INFO     | . payload setup = 5 s
[2025-06-04 09:40:07] 2025-06-04 13:39:46,338 | INFO     | . stage-in = 0 s
[2025-06-04 09:40:07] 2025-06-04 13:39:46,338 | INFO     | . payload execution = 3377 s
[2025-06-04 09:40:07] 2025-06-04 13:39:46,338 | INFO     | . stage-out = 0 s
[2025-06-04 09:40:07] 2025-06-04 13:39:46,338 | INFO     | . log creation = 0 s
[2025-06-04 09:40:07] 2025-06-04 13:39:46,338 | INFO     | ..............................
[2025-06-04 09:40:07] 2025-06-04 13:39:46,393 | INFO     | 
[2025-06-04 09:40:07] 2025-06-04 13:39:46,393 | INFO     | job summary report
[2025-06-04 09:40:07] 2025-06-04 13:39:46,393 | INFO     | --------------------------------------------------
[2025-06-04 09:40:07] 2025-06-04 13:39:46,393 | INFO     | PanDA job id: 6678891421
[2025-06-04 09:40:07] 2025-06-04 13:39:46,393 | INFO     | task id: 45006595
[2025-06-04 09:40:07] 2025-06-04 13:39:46,393 | INFO     | errors: (none)
[2025-06-04 09:40:07] 2025-06-04 13:39:46,393 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:40:07] 2025-06-04 13:39:46,394 | INFO     | pilot state: finished 
[2025-06-04 09:40:07] 2025-06-04 13:39:46,394 | INFO     | transexitcode: 0
[2025-06-04 09:40:07] 2025-06-04 13:39:46,394 | INFO     | exeerrorcode: 0
[2025-06-04 09:40:07] 2025-06-04 13:39:46,394 | INFO     | exeerrordiag: 
[2025-06-04 09:40:07] 2025-06-04 13:39:46,394 | INFO     | exitcode: 0
[2025-06-04 09:40:07] 2025-06-04 13:39:46,394 | INFO     | exitmsg: OK
[2025-06-04 09:40:07] 2025-06-04 13:39:46,394 | INFO     | cpuconsumptiontime: 21941 s
[2025-06-04 09:40:07] 2025-06-04 13:39:46,394 | INFO     | nevents: 400
[2025-06-04 09:40:07] 2025-06-04 13:39:46,394 | INFO     | neventsw: 0
[2025-06-04 09:40:07] 2025-06-04 13:39:46,394 | INFO     | pid: 3981197
[2025-06-04 09:40:07] 2025-06-04 13:39:46,394 | INFO     | pgrp: 3981197
[2025-06-04 09:40:07] 2025-06-04 13:39:46,394 | INFO     | corecount: 8
[2025-06-04 09:40:07] 2025-06-04 13:39:46,394 | INFO     | event service: False
[2025-06-04 09:40:07] 2025-06-04 13:39:46,395 | INFO     | sizes: {0: 2397292, 1: 2397292, 4: 2397526, 11: 2397554, 3386: 2423123, 3387: 2432064, 3388: 2432248, 3392: 2432418}
[2025-06-04 09:40:07] 2025-06-04 13:39:46,395 | INFO     | --------------------------------------------------
[2025-06-04 09:40:07] 2025-06-04 13:39:46,395 | INFO     | 
[2025-06-04 09:40:07] 2025-06-04 13:39:46,395 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 09:40:07] 2025-06-04 13:39:46,411 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:40:07] 2025-06-04 13:39:46,411 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:40:07] 2025-06-04 13:39:46,411 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:40:07] 2025-06-04 13:39:46,411 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:40:07] 2025-06-04 13:39:46,411 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:40:07] 2025-06-04 13:39:46,411 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:40:07] 2025-06-04 13:39:46,411 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:40:07] 2025-06-04 13:39:46,411 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:40:07] 2025-06-04 13:39:46,411 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:40:07] 2025-06-04 13:39:46,412 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:40:07] 2025-06-04 13:39:46,412 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:40:07] 2025-06-04 13:39:46,412 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:40:07] 2025-06-04 13:39:46,412 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:40:07] 2025-06-04 13:39:46,412 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:40:07] 2025-06-04 13:39:46,412 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:40:07] 2025-06-04 13:39:46,412 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:40:07] 2025-06-04 13:39:46,412 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:40:07] 2025-06-04 13:39:46,412 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:40:07] 2025-06-04 13:39:46,412 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:40:07] 2025-06-04 13:39:46,412 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:40:07] 2025-06-04 13:39:46,412 | INFO     | job 6678891421 has completed (purged errors)
[2025-06-04 09:40:07] 2025-06-04 13:39:46,413 | INFO     | overall cleanup function is called
[2025-06-04 09:40:07] 2025-06-04 13:39:47,420 | INFO     | --- collectZombieJob: --- 10, [3981197]
[2025-06-04 09:40:07] 2025-06-04 13:39:47,421 | INFO     | zombie collector waiting for pid 3981197
[2025-06-04 09:40:07] 2025-06-04 13:39:47,422 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:40:07] 2025-06-04 13:39:47,422 | INFO     | collected zombie processes
[2025-06-04 09:40:07] 2025-06-04 13:39:47,422 | INFO     | will attempt to kill all subprocesses of pid=3981197
[2025-06-04 09:40:07] 2025-06-04 13:39:48,000 | WARNING  | process 3981197 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 09:40:07] 2025-06-04 13:39:48,155 | INFO     | process IDs to be killed: [3981197] (in reverse order)
[2025-06-04 09:40:07] 2025-06-04 13:39:48,259 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:40:07] 2025-06-04 13:39:48,259 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:40:07] 2025-06-04 13:39:48,304 | INFO     | did not find any defunct processes belonging to 3981197
[2025-06-04 09:40:07] 2025-06-04 13:39:48,354 | INFO     | did not find any defunct processes belonging to 3981197
[2025-06-04 09:40:07] 2025-06-04 13:39:48,354 | INFO     | ready for new job
[2025-06-04 09:40:07] 2025-06-04 13:39:48,354 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:40:07] 2025-06-04 13:39:48,357 | INFO     | **************************************
[2025-06-04 09:40:07] 2025-06-04 13:39:48,357 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:40:07] 2025-06-04 13:39:48,358 | INFO     | **************************************
[2025-06-04 09:40:07] 2025-06-04 13:39:48,358 | INFO     | 
[2025-06-04 09:40:07] 2025-06-04 13:39:48,378 | INFO     | architecture information:
[2025-06-04 09:40:07] 2025-06-04 13:39:48,378 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:40:07] 2025-06-04 13:39:48,394 | INFO     | cat /etc/os-release:
[2025-06-04 09:40:07] NAME="CentOS Linux"
[2025-06-04 09:40:07] VERSION="7 (Core)"
[2025-06-04 09:40:07] ID="centos"
[2025-06-04 09:40:07] ID_LIKE="rhel fedora"
[2025-06-04 09:40:07] VERSION_ID="7"
[2025-06-04 09:40:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:40:07] ANSI_COLOR="0;31"
[2025-06-04 09:40:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:40:07] HOME_URL="https://www.centos.org/"
[2025-06-04 09:40:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:40:07] 
[2025-06-04 09:40:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:40:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:40:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:40:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:40:07] 
[2025-06-04 09:40:07] 2025-06-04 13:39:48,394 | INFO     | **************************************
[2025-06-04 09:40:07] 2025-06-04 13:39:48,442 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:40:07] 2025-06-04 13:39:48,753 | INFO     | number of running child processes to parent process 3981197: 1
[2025-06-04 09:40:07] 2025-06-04 13:39:48,753 | INFO     | maximum number of monitored processes: 6
[2025-06-04 09:40:07] 2025-06-04 13:39:48,753 | INFO     | aborting job monitoring since job object (job id=6678891421) has expired
[2025-06-04 09:40:07] 2025-06-04 13:39:48,897 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 09:40:07] 2025-06-04 13:39:48,914 | INFO     | sufficient remaining disk space (95563022336 B)
[2025-06-04 09:40:07] 2025-06-04 13:39:48,915 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:40:07] 2025-06-04 13:39:48,915 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:40:07] 2025-06-04 13:39:48,915 | INFO     | update_server=False
[2025-06-04 09:40:07] 2025-06-04 13:39:48,915 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:40:07] 2025-06-04 13:39:48,915 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:40:07] 2025-06-04 13:39:48,916 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:40:07] 2025-06-04 13:39:48,916 | INFO     | will abort loop
[2025-06-04 09:40:07] 2025-06-04 13:39:49,206 | INFO     | all payload control threads have been joined
[2025-06-04 09:40:07] 2025-06-04 13:39:49,608 | INFO     | all data control threads have been joined
[2025-06-04 09:40:07] 2025-06-04 13:39:49,700 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:40:07] 2025-06-04 13:39:49,701 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:40:07] 2025-06-04 13:39:49,701 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:40:07] 2025-06-04 13:39:49,920 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:40:07] 2025-06-04 13:39:49,921 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:40:07] 2025-06-04 13:39:50,029 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:40:07] 2025-06-04 13:39:50,055 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:40:07] 2025-06-04 13:39:50,104 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:40:07] 2025-06-04 13:39:50,211 | INFO     | [payload] control thread has finished
[2025-06-04 09:40:07] 2025-06-04 13:39:50,430 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:40:07] 2025-06-04 13:39:50,595 | INFO     | all job control threads have been joined
[2025-06-04 09:40:07] 2025-06-04 13:39:50,613 | INFO     | [data] control thread has finished
[2025-06-04 09:40:07] 2025-06-04 13:39:50,886 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:40:07] 2025-06-04 13:39:50,972 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:40:07] 2025-06-04 13:39:51,155 | INFO     | [job] validate thread has finished
[2025-06-04 09:40:07] 2025-06-04 13:39:51,403 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:40:07] 2025-06-04 13:39:51,419 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:40:07] 2025-06-04 13:39:51,600 | INFO     | [job] control thread has finished
[2025-06-04 09:40:07] 2025-06-04 13:39:52,034 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:40:07] 2025-06-04 13:39:52,408 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:40:07] 2025-06-04 13:39:52,922 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:40:07] 2025-06-04 13:39:59,106 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:40:07] 2025-06-04 13:40:00,112 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:40:07] 2025-06-04 13:40:02,075 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140599508543296)>', '<ExcThread(monitor, started 140599009195776)>']
[2025-06-04 09:40:07] 2025-06-04 13:40:02,765 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:40:07] 2025-06-04 13:40:02,765 | INFO     | [monitor] control thread has ended
[2025-06-04 09:40:07] 2025-06-04 13:40:07,087 | INFO     | all workflow threads have been joined
[2025-06-04 09:40:07] 2025-06-04 13:40:07,087 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:40:07] 2025-06-04 13:40:07,087 | INFO     | traces error code: 0
[2025-06-04 09:40:07] 2025-06-04 13:40:07,087 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:40:07] 2025-06-04 13:40:07,199 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:40:07] 2025-06-04 13:40:07,201 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:40:07] 2025-06-04 13:40:07,203 [wrapper] pilotpid: 3974382
[2025-06-04 09:40:07] 2025-06-04 13:40:07,205 [wrapper] Pilot exit status: 0
[2025-06-04 09:40:07] 2025-06-04 13:40:07,212 [wrapper] pandaids: 6678891421
[2025-06-04 09:40:07] 2025-06-04 13:40:07,258 [wrapper] cleanup supervisor_pilot 4106459 3974383
[2025-06-04 09:40:07] 2025-06-04 13:40:07,261 [wrapper] Test setup, not cleaning
[2025-06-04 09:40:07] 2025-06-04 13:40:07,263 [wrapper] apfmon messages muted
[2025-06-04 09:40:07] 2025-06-04 13:40:07,265 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:40:07] 2025-06-04 13:40:07,266 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:40:07]  *** Error codes and diagnostics ***
[2025-06-04 09:40:07]     "exeErrorCode": 0,
[2025-06-04 09:40:07]     "exeErrorDiag": "",
[2025-06-04 09:40:07]     "pilotErrorCode": 0,
[2025-06-04 09:40:07]     "pilotErrorDiag": "",
[2025-06-04 09:40:07]  *** Listing of results directory ***
[2025-06-04 09:40:07] total 382556
[2025-06-04 09:40:07] -rwx------. 1 boincer umatlas     37140 Jun  4 04:31 runpilot2-wrapper.sh
[2025-06-04 09:40:07] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:31 pilot3.tar.gz
[2025-06-04 09:40:07] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:32 queuedata.json
[2025-06-04 09:40:07] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:40:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:42 run_atlas
[2025-06-04 09:40:07] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:42 job.xml
[2025-06-04 09:40:07] -rw-r--r--. 2 boincer umatlas 214003562 Jun  4 08:42 EVNT.45006593._001179.pool.root.1
[2025-06-04 09:40:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:42 start_atlas.sh
[2025-06-04 09:40:07] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:42 shared
[2025-06-04 09:40:07] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 08:42 input.tar.gz
[2025-06-04 09:40:07] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:42 boinc_lockfile
[2025-06-04 09:40:07] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 08:42 pandaJob.out
[2025-06-04 09:40:07] -rw-------. 1 boincer umatlas    986811 Jun  4 08:42 agis_schedconf.cvmfs.json
[2025-06-04 09:40:07] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:42 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:40:07] drwx------. 4 boincer umatlas      4096 Jun  4 08:43 pilot3
[2025-06-04 09:40:07] -rw-r--r--. 1 boincer umatlas       529 Jun  4 09:39 boinc_task_state.xml
[2025-06-04 09:40:07] -rw-------. 1 boincer umatlas 172610653 Jun  4 09:39 HITS.45006595._055668.pool.root.1
[2025-06-04 09:40:07] -rw-------. 1 boincer umatlas        95 Jun  4 09:39 pilot_heartbeat.json
[2025-06-04 09:40:07] -rw-------. 1 boincer umatlas      1038 Jun  4 09:39 memory_monitor_summary.json
[2025-06-04 09:40:07] -rw-r--r--. 1 boincer umatlas      6859 Jun  4 09:39 init_data.xml
[2025-06-04 09:40:07] -rw-------. 1 boincer umatlas    302211 Jun  4 09:39 log.45006595._055668.job.log.tgz.1
[2025-06-04 09:40:07] -rw-------. 1 boincer umatlas      7725 Jun  4 09:39 heartbeat.json
[2025-06-04 09:40:07] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:40 boinc_mmap_file
[2025-06-04 09:40:07] -rw-r--r--. 1 boincer umatlas        27 Jun  4 09:40 wrapper_checkpoint.txt
[2025-06-04 09:40:07] -rw-------. 1 boincer umatlas      4832 Jun  4 09:40 pilotlog.txt
[2025-06-04 09:40:07] -rw-------. 1 boincer umatlas    347303 Jun  4 09:40 log.45006595._055668.job.log.1
[2025-06-04 09:40:07] -rw-------. 1 boincer umatlas       357 Jun  4 09:40 output.list
[2025-06-04 09:40:07] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:40 runtime_log
[2025-06-04 09:40:07] -rw-------. 1 boincer umatlas    665600 Jun  4 09:40 result.tar.gz
[2025-06-04 09:40:07] -rw-r--r--. 1 boincer umatlas      8669 Jun  4 09:40 runtime_log.err
[2025-06-04 09:40:07] -rw-------. 1 boincer umatlas       652 Jun  4 09:40 i2BNDmZiyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtmnKDmYbc38m.diag
[2025-06-04 09:40:07] -rw-r--r--. 1 boincer umatlas     21197 Jun  4 09:40 stderr.txt
[2025-06-04 09:40:07] HITS file was successfully produced:
[2025-06-04 09:40:07] -rw-------. 1 boincer umatlas 172610653 Jun  4 09:39 shared/HITS.pool.root.1
[2025-06-04 09:40:07]  *** Contents of shared directory: ***
[2025-06-04 09:40:07] total 378728
[2025-06-04 09:40:07] -rw-r--r--. 2 boincer umatlas 214003562 Jun  4 08:42 ATLAS.root_0
[2025-06-04 09:40:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:42 start_atlas.sh
[2025-06-04 09:40:07] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 08:42 input.tar.gz
[2025-06-04 09:40:07] -rw-------. 1 boincer umatlas 172610653 Jun  4 09:39 HITS.pool.root.1
[2025-06-04 09:40:07] -rw-------. 1 boincer umatlas    665600 Jun  4 09:40 result.tar.gz
09:40:09 (3970563): run_atlas exited; CPU time 22055.424377
09:40:09 (3970563): called boinc_finish(0)

</stderr_txt>
]]>

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