Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:35:23 (2372009): wrapper (7.7.26015): starting
08:35:23 (2372009): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:35:23] Arguments: --nthreads 8
[2025-06-04 08:35:23] Threads: 8
[2025-06-04 08:35:23] Checking for CVMFS
[2025-06-04 08:35:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:35:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:35:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:35:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:35:23] 2.12.6.0 8999 37313 501800 146780 1 70 22800526 32935937 15241 16776704 1 163711178 99.590 181708296 25470 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:35:23] CVMFS is ok
[2025-06-04 08:35:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:35:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:35:23] Further information can be found at the LHC@home message board.
[2025-06-04 08:35:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:35:23] Checking for apptainer binary...
[2025-06-04 08:35:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:35:23] Running /usr/bin/apptainer --version
[2025-06-04 08:35:23] apptainer version 1.4.1-1.el9
[2025-06-04 08:35:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:35:23] c7-11-16.aglt2.org
[2025-06-04 08:35:23] apptainer works
[2025-06-04 08:35:23] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:35:23] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:35:23] Starting ATLAS job with PandaID=6678950011
[2025-06-04 08:35:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:47:54]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:47:54]  is_tar=False
[2025-06-04 09:47:54]  lfn=log.45006595._055704.job.log.tgz.1
[2025-06-04 09:47:54]  mtime=0
[2025-06-04 09:47:54]  protocol_id=None
[2025-06-04 09:47:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:47:54]  replicas=None
[2025-06-04 09:47:54]  scope=mc23_13p6TeV
[2025-06-04 09:47:54]  status=None
[2025-06-04 09:47:54]  status_code=0
[2025-06-04 09:47:54]  storage_token=
[2025-06-04 09:47:54]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678950011/log.45006595._055704.job.log.tgz.1
[2025-06-04 09:47:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/e4/log.45006595._055704.job.log.tgz.1
[2025-06-04 09:47:54]  workdir=None
[2025-06-04 09:47:54] ]
[2025-06-04 09:47:54] 2025-06-04 13:47:26,600 | INFO     | transferring file log.45006595._055704.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678950011/log.45006595._055704.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:47:54] 2025-06-04 13:47:26,600 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678950011/log.45006595._055704.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._055704.job
[2025-06-04 09:47:54] 2025-06-04 13:47:26,623 | INFO     | adding to output.list: log.45006595._055704.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/e4/log.45006595._055704.job.log.tg
[2025-06-04 09:47:54] 2025-06-04 13:47:26,624 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:47:54] 2025-06-04 13:47:26,624 | INFO     | summary of transferred files:
[2025-06-04 09:47:54] 2025-06-04 13:47:26,624 | INFO     |  -- lfn=log.45006595._055704.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:47:54] 2025-06-04 13:47:26,625 | INFO     | stage-out finished correctly
[2025-06-04 09:47:54] 2025-06-04 13:47:27,563 | WARNING  | process 2390369 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 09:47:54] 2025-06-04 13:47:27,563 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678950011/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:47:54] 2025-06-04 13:47:27,869 | INFO     | number of running child processes to parent process 2390369: 1
[2025-06-04 09:47:54] 2025-06-04 13:47:27,871 | INFO     | maximum number of monitored processes: 6
[2025-06-04 09:47:54] 2025-06-04 13:47:29,351 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:47:54] 2025-06-04 13:47:29,576 | INFO     | job 6678950011 has state=finished
[2025-06-04 09:47:54] 2025-06-04 13:47:29,576 | INFO     | preparing for final server update for job 6678950011 in state='finished'
[2025-06-04 09:47:54] 2025-06-04 13:47:29,577 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:47:54] 2025-06-04 13:47:29,577 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:47:54] 2025-06-04 13:47:29,577 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:47:54] 2025-06-04 13:47:29,577 | INFO     | job 6678950011 has finished - writing final server update
[2025-06-04 09:47:54] 2025-06-04 13:47:29,577 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:47:54] 2025-06-04 13:47:29,595 | INFO     | executing command: lscpu
[2025-06-04 09:47:54] 2025-06-04 13:47:29,682 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:47:54] 2025-06-04 13:47:30,374 | INFO     | monitor loop #319: job 0:6678950011 is in state 'finished'
[2025-06-04 09:47:54] 2025-06-04 13:47:30,375 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:47:54] 2025-06-04 13:47:32,878 | INFO     | monitor loop #320: job 0:6678950011 is in state 'finished'
[2025-06-04 09:47:54] 2025-06-04 13:47:32,880 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:47:54] 2025-06-04 13:47:34,034 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 09:47:54] 2025-06-04 13:47:34,034 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678950011/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:47:54] 2025-06-04 13:47:34,035 | INFO     | extracted standard info from prmon json
[2025-06-04 09:47:54] 2025-06-04 13:47:34,035 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:47:54] 2025-06-04 13:47:34,035 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:47:54] 2025-06-04 13:47:34,035 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:47:54] 2025-06-04 13:47:34,035 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:47:54] 2025-06-04 13:47:34,037 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:47:54] 2025-06-04 13:47:34,037 | INFO     | sum of square deviations: 81266640.0
[2025-06-04 09:47:54] 2025-06-04 13:47:34,038 | INFO     | sum of deviations: 1864358707.5
[2025-06-04 09:47:54] 2025-06-04 13:47:34,038 | INFO     | mean x: 1749042789.5
[2025-06-04 09:47:54] 2025-06-04 13:47:34,038 | INFO     | mean y: 2250894.578125
[2025-06-04 09:47:54] 2025-06-04 13:47:34,038 | INFO     | -- intersect: -40122985664.90575
[2025-06-04 09:47:54] 2025-06-04 13:47:34,038 | INFO     | intersect: -40122985664.90575
[2025-06-04 09:47:54] 2025-06-04 13:47:34,038 | INFO     | chi2: 0.6849746665940513
[2025-06-04 09:47:54] 2025-06-04 13:47:34,038 | INFO     | -- intersect: -40122985664.90575
[2025-06-04 09:47:54] 2025-06-04 13:47:34,038 | INFO     | current memory leak: 22.94 B/s (using 64 data points, chi2=0.68)
[2025-06-04 09:47:54] 2025-06-04 13:47:34,039 | INFO     | ..............................
[2025-06-04 09:47:54] 2025-06-04 13:47:34,039 | INFO     | . Timing measurements:
[2025-06-04 09:47:54] 2025-06-04 13:47:34,039 | INFO     | . get job = 0 s
[2025-06-04 09:47:54] 2025-06-04 13:47:34,039 | INFO     | . initial setup = 2 s
[2025-06-04 09:47:54] 2025-06-04 13:47:34,039 | INFO     | . payload setup = 7 s
[2025-06-04 09:47:54] 2025-06-04 13:47:34,039 | INFO     | . stage-in = 0 s
[2025-06-04 09:47:54] 2025-06-04 13:47:34,039 | INFO     | . payload execution = 4284 s
[2025-06-04 09:47:54] 2025-06-04 13:47:34,039 | INFO     | . stage-out = 0 s
[2025-06-04 09:47:54] 2025-06-04 13:47:34,039 | INFO     | . log creation = 0 s
[2025-06-04 09:47:54] 2025-06-04 13:47:34,039 | INFO     | ..............................
[2025-06-04 09:47:54] 2025-06-04 13:47:34,121 | INFO     | 
[2025-06-04 09:47:54] 2025-06-04 13:47:34,121 | INFO     | job summary report
[2025-06-04 09:47:54] 2025-06-04 13:47:34,121 | INFO     | --------------------------------------------------
[2025-06-04 09:47:54] 2025-06-04 13:47:34,121 | INFO     | PanDA job id: 6678950011
[2025-06-04 09:47:54] 2025-06-04 13:47:34,121 | INFO     | task id: 45006595
[2025-06-04 09:47:54] 2025-06-04 13:47:34,122 | INFO     | errors: (none)
[2025-06-04 09:47:54] 2025-06-04 13:47:34,122 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:47:54] 2025-06-04 13:47:34,122 | INFO     | pilot state: finished 
[2025-06-04 09:47:54] 2025-06-04 13:47:34,122 | INFO     | transexitcode: 0
[2025-06-04 09:47:54] 2025-06-04 13:47:34,122 | INFO     | exeerrorcode: 0
[2025-06-04 09:47:54] 2025-06-04 13:47:34,122 | INFO     | exeerrordiag: 
[2025-06-04 09:47:54] 2025-06-04 13:47:34,122 | INFO     | exitcode: 0
[2025-06-04 09:47:54] 2025-06-04 13:47:34,122 | INFO     | exitmsg: OK
[2025-06-04 09:47:54] 2025-06-04 13:47:34,122 | INFO     | cpuconsumptiontime: 28976 s
[2025-06-04 09:47:54] 2025-06-04 13:47:34,122 | INFO     | nevents: 400
[2025-06-04 09:47:54] 2025-06-04 13:47:34,122 | INFO     | neventsw: 0
[2025-06-04 09:47:54] 2025-06-04 13:47:34,122 | INFO     | pid: 2390369
[2025-06-04 09:47:54] 2025-06-04 13:47:34,122 | INFO     | pgrp: 2390369
[2025-06-04 09:47:54] 2025-06-04 13:47:34,122 | INFO     | corecount: 8
[2025-06-04 09:47:54] 2025-06-04 13:47:34,123 | INFO     | event service: False
[2025-06-04 09:47:54] 2025-06-04 13:47:34,123 | INFO     | sizes: {0: 2397119, 1: 2397318, 5: 2397524, 11: 2397580, 4294: 2423374, 4295: 2423373, 4296: 2432498, 4298: 2432554, 4303: 2432724}
[2025-06-04 09:47:54] 2025-06-04 13:47:34,123 | INFO     | --------------------------------------------------
[2025-06-04 09:47:54] 2025-06-04 13:47:34,123 | INFO     | 
[2025-06-04 09:47:54] 2025-06-04 13:47:34,123 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 09:47:54] 2025-06-04 13:47:34,150 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:47:54] 2025-06-04 13:47:34,150 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:47:54] 2025-06-04 13:47:34,150 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:47:54] 2025-06-04 13:47:34,150 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:47:54] 2025-06-04 13:47:34,150 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:47:54] 2025-06-04 13:47:34,150 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:47:54] 2025-06-04 13:47:34,150 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:47:54] 2025-06-04 13:47:34,150 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:47:54] 2025-06-04 13:47:34,150 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:47:54] 2025-06-04 13:47:34,151 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:47:54] 2025-06-04 13:47:34,151 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:47:54] 2025-06-04 13:47:34,151 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:47:54] 2025-06-04 13:47:34,151 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:47:54] 2025-06-04 13:47:34,151 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:47:54] 2025-06-04 13:47:34,151 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:47:54] 2025-06-04 13:47:34,151 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:47:54] 2025-06-04 13:47:34,151 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:47:54] 2025-06-04 13:47:34,151 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:47:54] 2025-06-04 13:47:34,151 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:47:54] 2025-06-04 13:47:34,151 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:47:54] 2025-06-04 13:47:34,151 | INFO     | job 6678950011 has completed (purged errors)
[2025-06-04 09:47:54] 2025-06-04 13:47:34,151 | INFO     | overall cleanup function is called
[2025-06-04 09:47:54] 2025-06-04 13:47:35,160 | INFO     | --- collectZombieJob: --- 10, [2390369]
[2025-06-04 09:47:54] 2025-06-04 13:47:35,160 | INFO     | zombie collector waiting for pid 2390369
[2025-06-04 09:47:54] 2025-06-04 13:47:35,160 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:47:54] 2025-06-04 13:47:35,160 | INFO     | collected zombie processes
[2025-06-04 09:47:54] 2025-06-04 13:47:35,160 | INFO     | will attempt to kill all subprocesses of pid=2390369
[2025-06-04 09:47:54] 2025-06-04 13:47:35,533 | INFO     | process IDs to be killed: [2390369] (in reverse order)
[2025-06-04 09:47:54] 2025-06-04 13:47:35,656 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:47:54] 2025-06-04 13:47:35,657 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:47:54] 2025-06-04 13:47:35,672 | INFO     | did not find any defunct processes belonging to 2390369
[2025-06-04 09:47:54] 2025-06-04 13:47:35,685 | INFO     | did not find any defunct processes belonging to 2390369
[2025-06-04 09:47:54] 2025-06-04 13:47:35,685 | INFO     | ready for new job
[2025-06-04 09:47:54] 2025-06-04 13:47:35,685 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:47:54] 2025-06-04 13:47:35,687 | INFO     | **************************************
[2025-06-04 09:47:54] 2025-06-04 13:47:35,687 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:47:54] 2025-06-04 13:47:35,687 | INFO     | **************************************
[2025-06-04 09:47:54] 2025-06-04 13:47:35,687 | INFO     | 
[2025-06-04 09:47:54] 2025-06-04 13:47:35,702 | INFO     | architecture information:
[2025-06-04 09:47:54] 2025-06-04 13:47:35,703 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:47:54] 2025-06-04 13:47:35,724 | INFO     | cat /etc/os-release:
[2025-06-04 09:47:54] NAME="CentOS Linux"
[2025-06-04 09:47:54] VERSION="7 (Core)"
[2025-06-04 09:47:54] ID="centos"
[2025-06-04 09:47:54] ID_LIKE="rhel fedora"
[2025-06-04 09:47:54] VERSION_ID="7"
[2025-06-04 09:47:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:47:54] ANSI_COLOR="0;31"
[2025-06-04 09:47:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:47:54] HOME_URL="https://www.centos.org/"
[2025-06-04 09:47:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:47:54] 
[2025-06-04 09:47:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:47:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:47:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:47:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:47:54] 
[2025-06-04 09:47:54] 2025-06-04 13:47:35,724 | INFO     | **************************************
[2025-06-04 09:47:54] 2025-06-04 13:47:36,227 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 09:47:54] 2025-06-04 13:47:36,247 | INFO     | sufficient remaining disk space (96106184704 B)
[2025-06-04 09:47:54] 2025-06-04 13:47:36,248 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:47:54] 2025-06-04 13:47:36,248 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:47:54] 2025-06-04 13:47:36,248 | INFO     | update_server=False
[2025-06-04 09:47:54] 2025-06-04 13:47:36,248 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:47:54] 2025-06-04 13:47:36,248 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:47:54] 2025-06-04 13:47:36,249 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:47:54] 2025-06-04 13:47:36,249 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:47:54] 2025-06-04 13:47:36,249 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:47:54] 2025-06-04 13:47:36,249 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:47:54] 2025-06-04 13:47:36,391 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:47:54] 2025-06-04 13:47:36,391 | INFO     | aborting loop
[2025-06-04 09:47:54] 2025-06-04 13:47:36,852 | INFO     | all payload control threads have been joined
[2025-06-04 09:47:54] 2025-06-04 13:47:37,137 | INFO     | all data control threads have been joined
[2025-06-04 09:47:54] 2025-06-04 13:47:37,222 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:47:54] 2025-06-04 13:47:37,253 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:47:54] 2025-06-04 13:47:37,397 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:47:54] 2025-06-04 13:47:37,558 | INFO     | all job control threads have been joined
[2025-06-04 09:47:54] 2025-06-04 13:47:37,610 | INFO     | [job] validate thread has finished
[2025-06-04 09:47:54] 2025-06-04 13:47:37,674 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:47:54] 2025-06-04 13:47:37,784 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:47:54] 2025-06-04 13:47:37,857 | INFO     | [payload] control thread has finished
[2025-06-04 09:47:54] 2025-06-04 13:47:38,142 | INFO     | [data] control thread has finished
[2025-06-04 09:47:54] 2025-06-04 13:47:38,278 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:47:54] 2025-06-04 13:47:38,309 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:47:54] 2025-06-04 13:47:38,341 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:47:54] 2025-06-04 13:47:38,522 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:47:54] 2025-06-04 13:47:38,563 | INFO     | [job] control thread has finished
[2025-06-04 09:47:54] 2025-06-04 13:47:39,131 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:47:54] 2025-06-04 13:47:39,229 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:47:54] 2025-06-04 13:47:40,136 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:47:54] 2025-06-04 13:47:40,254 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:47:54] 2025-06-04 13:47:46,809 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:47:54] 2025-06-04 13:47:47,815 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:47:54] 2025-06-04 13:47:48,968 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140717949937472)>', '<ExcThread(monitor, started 140717464733440)>']
[2025-06-04 09:47:54] 2025-06-04 13:47:49,311 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:47:54] 2025-06-04 13:47:49,311 | INFO     | [monitor] control thread has ended
[2025-06-04 09:47:54] 2025-06-04 13:47:53,994 | INFO     | all workflow threads have been joined
[2025-06-04 09:47:54] 2025-06-04 13:47:53,994 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:47:54] 2025-06-04 13:47:53,994 | INFO     | traces error code: 0
[2025-06-04 09:47:54] 2025-06-04 13:47:53,995 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:47:54] 2025-06-04 13:47:54,138 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:47:54] 2025-06-04 13:47:54,141 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:47:54] 2025-06-04 13:47:54,143 [wrapper] pilotpid: 2376754
[2025-06-04 09:47:54] 2025-06-04 13:47:54,145 [wrapper] Pilot exit status: 0
[2025-06-04 09:47:54] 2025-06-04 13:47:54,156 [wrapper] pandaids: 6678950011
[2025-06-04 09:47:54] 2025-06-04 13:47:54,240 [wrapper] cleanup supervisor_pilot 2622909 2376755
[2025-06-04 09:47:54] 2025-06-04 13:47:54,244 [wrapper] Test setup, not cleaning
[2025-06-04 09:47:54] 2025-06-04 13:47:54,247 [wrapper] apfmon messages muted
[2025-06-04 09:47:54] 2025-06-04 13:47:54,249 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:47:54] 2025-06-04 13:47:54,251 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:47:54]  *** Error codes and diagnostics ***
[2025-06-04 09:47:54]     "exeErrorCode": 0,
[2025-06-04 09:47:54]     "exeErrorDiag": "",
[2025-06-04 09:47:54]     "pilotErrorCode": 0,
[2025-06-04 09:47:54]     "pilotErrorDiag": "",
[2025-06-04 09:47:54]  *** Listing of results directory ***
[2025-06-04 09:47:54] total 390364
[2025-06-04 09:47:54] -rwx------. 1 boincer umatlas     37140 Jun  4 04:31 runpilot2-wrapper.sh
[2025-06-04 09:47:54] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:31 pilot3.tar.gz
[2025-06-04 09:47:54] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:32 queuedata.json
[2025-06-04 09:47:54] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:47:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:35 run_atlas
[2025-06-04 09:47:54] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:35 job.xml
[2025-06-04 09:47:54] -rw-r--r--. 2 boincer umatlas 216091767 Jun  4 08:35 EVNT.45006593._000915.pool.root.1
[2025-06-04 09:47:54] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:35 shared
[2025-06-04 09:47:54] -rw-r--r--. 2 boincer umatlas    508878 Jun  4 08:35 input.tar.gz
[2025-06-04 09:47:54] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:35 start_atlas.sh
[2025-06-04 09:47:54] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:35 boinc_lockfile
[2025-06-04 09:47:54] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 08:35 pandaJob.out
[2025-06-04 09:47:54] -rw-------. 1 boincer umatlas    986811 Jun  4 08:35 agis_schedconf.cvmfs.json
[2025-06-04 09:47:54] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:35 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:47:54] drwx------. 4 boincer umatlas      4096 Jun  4 08:35 pilot3
[2025-06-04 09:47:54] -rw-r--r--. 1 boincer umatlas      6898 Jun  4 09:46 init_data.xml
[2025-06-04 09:47:54] -rw-------. 1 boincer umatlas 178335075 Jun  4 09:46 HITS.45006595._055704.pool.root.1
[2025-06-04 09:47:54] -rw-r--r--. 1 boincer umatlas       529 Jun  4 09:47 boinc_task_state.xml
[2025-06-04 09:47:54] -rw-------. 1 boincer umatlas        95 Jun  4 09:47 pilot_heartbeat.json
[2025-06-04 09:47:54] -rw-------. 1 boincer umatlas      1025 Jun  4 09:47 memory_monitor_summary.json
[2025-06-04 09:47:54] -rw-------. 1 boincer umatlas    306260 Jun  4 09:47 log.45006595._055704.job.log.tgz.1
[2025-06-04 09:47:54] -rw-------. 1 boincer umatlas      7680 Jun  4 09:47 heartbeat.json
[2025-06-04 09:47:54] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:47 boinc_mmap_file
[2025-06-04 09:47:54] -rw-r--r--. 1 boincer umatlas        27 Jun  4 09:47 wrapper_checkpoint.txt
[2025-06-04 09:47:54] -rw-------. 1 boincer umatlas      4548 Jun  4 09:47 pilotlog.txt
[2025-06-04 09:47:54] -rw-------. 1 boincer umatlas    430584 Jun  4 09:47 log.45006595._055704.job.log.1
[2025-06-04 09:47:54] -rw-------. 1 boincer umatlas       357 Jun  4 09:47 output.list
[2025-06-04 09:47:54] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:47 runtime_log
[2025-06-04 09:47:54] -rw-------. 1 boincer umatlas    757760 Jun  4 09:47 result.tar.gz
[2025-06-04 09:47:54] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 09:47 runtime_log.err
[2025-06-04 09:47:54] -rw-------. 1 boincer umatlas       651 Jun  4 09:47 8U2NDmZiyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSnnKDmgxNTJm.diag
[2025-06-04 09:47:54] -rw-r--r--. 1 boincer umatlas     21527 Jun  4 09:47 stderr.txt
[2025-06-04 09:47:54] HITS file was successfully produced:
[2025-06-04 09:47:54] -rw-------. 1 boincer umatlas 178335075 Jun  4 09:46 shared/HITS.pool.root.1
[2025-06-04 09:47:54]  *** Contents of shared directory: ***
[2025-06-04 09:47:54] total 386448
[2025-06-04 09:47:54] -rw-r--r--. 2 boincer umatlas 216091767 Jun  4 08:35 ATLAS.root_0
[2025-06-04 09:47:54] -rw-r--r--. 2 boincer umatlas    508878 Jun  4 08:35 input.tar.gz
[2025-06-04 09:47:54] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:35 start_atlas.sh
[2025-06-04 09:47:54] -rw-------. 1 boincer umatlas 178335075 Jun  4 09:46 HITS.pool.root.1
[2025-06-04 09:47:54] -rw-------. 1 boincer umatlas    757760 Jun  4 09:47 result.tar.gz
09:47:55 (2372009): run_atlas exited; CPU time 29022.475515
09:47:55 (2372009): called boinc_finish(0)

</stderr_txt>
]]>

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