Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:52:23 (3702433): wrapper (7.7.26015): starting
09:52:23 (3702433): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 09:52:23] Arguments: --nthreads 12
[2025-06-04 09:52:23] Threads: 12
[2025-06-04 09:52:23] Checking for CVMFS
[2025-06-04 09:52:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:52:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:52:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:52:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:52:24] 2.12.6.0 5047 31535 431872 146781 3 262 23673349 32935937 13544 16776704 1 103038002 99.631 103061144 26768 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 09:52:24] CVMFS is ok
[2025-06-04 09:52:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:52:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:52:24] Further information can be found at the LHC@home message board.
[2025-06-04 09:52:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:52:24] Checking for apptainer binary...
[2025-06-04 09:52:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:52:24] Running /usr/bin/apptainer --version
[2025-06-04 09:52:24] apptainer version 1.4.1-1.el9
[2025-06-04 09:52:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:52:24] c6-6-39-2.aglt2.org
[2025-06-04 09:52:24] apptainer works
[2025-06-04 09:52:24] Set ATHENA_PROC_NUMBER=12
[2025-06-04 09:52:24] Set ATHENA_CORE_NUMBER=12
[2025-06-04 09:52:24] Starting ATLAS job with PandaID=6678902907
[2025-06-04 09:52:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:48:54]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:48:54]  guid=9049c92e-6a94-4cf5-a38b-49a9715b2ebf
[2025-06-04 10:48:54]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 10:48:54]  is_altstaged=None
[2025-06-04 10:48:54]  is_tar=False
[2025-06-04 10:48:54]  lfn=log.45006595._055678.job.log.tgz.1
[2025-06-04 10:48:54]  mtime=0
[2025-06-04 10:48:54]  protocol_id=None
[2025-06-04 10:48:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:48:54]  replicas=None
[2025-06-04 10:48:54]  scope=mc23_13p6TeV
[2025-06-04 10:48:54]  status=None
[2025-06-04 10:48:54]  status_code=0
[2025-06-04 10:48:54]  storage_token=
[2025-06-04 10:48:54]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678902907/log.45006595._055678.job.log.tgz.1
[2025-06-04 10:48:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/0b/log.45006595._055678.job.log.tgz.1
[2025-06-04 10:48:54]  workdir=None
[2025-06-04 10:48:54] ]
[2025-06-04 10:48:54] 2025-06-04 14:48:26,039 | INFO     | transferring file log.45006595._055678.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678902907/log.45006595._055678.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:48:54] 2025-06-04 14:48:26,039 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678902907/log.45006595._055678.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._055678.job
[2025-06-04 10:48:54] 2025-06-04 14:48:26,057 | INFO     | adding to output.list: log.45006595._055678.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/0b/log.45006595._055678.job.log.tg
[2025-06-04 10:48:54] 2025-06-04 14:48:26,058 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:48:54] 2025-06-04 14:48:26,058 | INFO     | summary of transferred files:
[2025-06-04 10:48:54] 2025-06-04 14:48:26,058 | INFO     |  -- lfn=log.45006595._055678.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:48:54] 2025-06-04 14:48:26,058 | INFO     | stage-out finished correctly
[2025-06-04 10:48:54] 2025-06-04 14:48:27,362 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:48:54] 2025-06-04 14:48:28,948 | WARNING  | process 3713104 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 10:48:54] 2025-06-04 14:48:28,949 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678902907/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:48:54] 2025-06-04 14:48:29,198 | INFO     | number of running child processes to parent process 3713104: 1
[2025-06-04 10:48:54] 2025-06-04 14:48:29,199 | INFO     | maximum number of monitored processes: 6
[2025-06-04 10:48:54] 2025-06-04 14:48:30,022 | INFO     | job 6678902907 has state=finished
[2025-06-04 10:48:54] 2025-06-04 14:48:30,022 | INFO     | preparing for final server update for job 6678902907 in state='finished'
[2025-06-04 10:48:54] 2025-06-04 14:48:30,022 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:48:54] 2025-06-04 14:48:30,023 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:48:54] 2025-06-04 14:48:30,023 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:48:54] 2025-06-04 14:48:30,023 | INFO     | job 6678902907 has finished - writing final server update
[2025-06-04 10:48:54] 2025-06-04 14:48:30,023 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:48:54] 2025-06-04 14:48:30,038 | INFO     | executing command: lscpu
[2025-06-04 10:48:54] 2025-06-04 14:48:30,115 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:48:54] 2025-06-04 14:48:31,702 | INFO     | monitor loop #252: job 0:6678902907 is in state 'finished'
[2025-06-04 10:48:54] 2025-06-04 14:48:31,702 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:48:54] 2025-06-04 14:48:33,779 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 10:48:54] 2025-06-04 14:48:33,780 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678902907/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:48:54] 2025-06-04 14:48:33,781 | INFO     | extracted standard info from prmon json
[2025-06-04 10:48:54] 2025-06-04 14:48:33,781 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:48:54] 2025-06-04 14:48:33,781 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:48:54] 2025-06-04 14:48:33,781 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:48:54] 2025-06-04 14:48:33,781 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:48:54] 2025-06-04 14:48:33,783 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:48:54] 2025-06-04 14:48:33,783 | INFO     | sum of square deviations: 34277852.0
[2025-06-04 10:48:54] 2025-06-04 14:48:33,783 | INFO     | sum of deviations: 4650271529.5
[2025-06-04 10:48:54] 2025-06-04 14:48:33,783 | INFO     | mean x: 1749046919.5
[2025-06-04 10:48:54] 2025-06-04 14:48:33,784 | INFO     | mean y: 2572106.1875
[2025-06-04 10:48:54] 2025-06-04 14:48:33,784 | INFO     | -- intersect: -237280181011.20526
[2025-06-04 10:48:54] 2025-06-04 14:48:33,784 | INFO     | intersect: -237280181011.20526
[2025-06-04 10:48:54] 2025-06-04 14:48:33,784 | INFO     | chi2: 1.1726156128702845
[2025-06-04 10:48:54] 2025-06-04 14:48:33,784 | INFO     | -- intersect: -237280181011.20526
[2025-06-04 10:48:54] 2025-06-04 14:48:33,784 | INFO     | current memory leak: 135.66 B/s (using 48 data points, chi2=1.17)
[2025-06-04 10:48:54] 2025-06-04 14:48:33,784 | INFO     | ..............................
[2025-06-04 10:48:54] 2025-06-04 14:48:33,785 | INFO     | . Timing measurements:
[2025-06-04 10:48:54] 2025-06-04 14:48:33,785 | INFO     | . get job = 0 s
[2025-06-04 10:48:54] 2025-06-04 14:48:33,785 | INFO     | . initial setup = 2 s
[2025-06-04 10:48:54] 2025-06-04 14:48:33,785 | INFO     | . payload setup = 6 s
[2025-06-04 10:48:54] 2025-06-04 14:48:33,785 | INFO     | . stage-in = 0 s
[2025-06-04 10:48:54] 2025-06-04 14:48:33,785 | INFO     | . payload execution = 3325 s
[2025-06-04 10:48:54] 2025-06-04 14:48:33,785 | INFO     | . stage-out = 0 s
[2025-06-04 10:48:54] 2025-06-04 14:48:33,785 | INFO     | . log creation = 0 s
[2025-06-04 10:48:54] 2025-06-04 14:48:33,785 | INFO     | ..............................
[2025-06-04 10:48:54] 2025-06-04 14:48:33,846 | INFO     | 
[2025-06-04 10:48:54] 2025-06-04 14:48:33,846 | INFO     | job summary report
[2025-06-04 10:48:54] 2025-06-04 14:48:33,846 | INFO     | --------------------------------------------------
[2025-06-04 10:48:54] 2025-06-04 14:48:33,846 | INFO     | PanDA job id: 6678902907
[2025-06-04 10:48:54] 2025-06-04 14:48:33,846 | INFO     | task id: 45006595
[2025-06-04 10:48:54] 2025-06-04 14:48:33,847 | INFO     | errors: (none)
[2025-06-04 10:48:54] 2025-06-04 14:48:33,847 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:48:54] 2025-06-04 14:48:33,847 | INFO     | pilot state: finished 
[2025-06-04 10:48:54] 2025-06-04 14:48:33,847 | INFO     | transexitcode: 0
[2025-06-04 10:48:54] 2025-06-04 14:48:33,847 | INFO     | exeerrorcode: 0
[2025-06-04 10:48:54] 2025-06-04 14:48:33,847 | INFO     | exeerrordiag: 
[2025-06-04 10:48:54] 2025-06-04 14:48:33,847 | INFO     | exitcode: 0
[2025-06-04 10:48:54] 2025-06-04 14:48:33,847 | INFO     | exitmsg: OK
[2025-06-04 10:48:54] 2025-06-04 14:48:33,847 | INFO     | cpuconsumptiontime: 31257 s
[2025-06-04 10:48:54] 2025-06-04 14:48:33,847 | INFO     | nevents: 400
[2025-06-04 10:48:54] 2025-06-04 14:48:33,847 | INFO     | neventsw: 0
[2025-06-04 10:48:54] 2025-06-04 14:48:33,847 | INFO     | pid: 3713104
[2025-06-04 10:48:54] 2025-06-04 14:48:33,847 | INFO     | pgrp: 3713104
[2025-06-04 10:48:54] 2025-06-04 14:48:33,847 | INFO     | corecount: 12
[2025-06-04 10:48:54] 2025-06-04 14:48:33,847 | INFO     | event service: False
[2025-06-04 10:48:54] 2025-06-04 14:48:33,847 | INFO     | sizes: {0: 2397119, 1: 2397318, 5: 2397524, 11: 2397580, 3335: 2423171, 3336: 2432112, 3338: 2432296, 3344: 2432466}
[2025-06-04 10:48:54] 2025-06-04 14:48:33,847 | INFO     | --------------------------------------------------
[2025-06-04 10:48:54] 2025-06-04 14:48:33,847 | INFO     | 
[2025-06-04 10:48:54] 2025-06-04 14:48:33,847 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 10:48:54] 2025-06-04 14:48:33,860 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:48:54] 2025-06-04 14:48:33,861 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:48:54] 2025-06-04 14:48:33,861 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:48:54] 2025-06-04 14:48:33,861 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:48:54] 2025-06-04 14:48:33,861 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:48:54] 2025-06-04 14:48:33,861 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:48:54] 2025-06-04 14:48:33,861 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:48:54] 2025-06-04 14:48:33,861 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:48:54] 2025-06-04 14:48:33,861 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:48:54] 2025-06-04 14:48:33,862 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:48:54] 2025-06-04 14:48:33,862 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:48:54] 2025-06-04 14:48:33,862 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:48:54] 2025-06-04 14:48:33,862 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:48:54] 2025-06-04 14:48:33,862 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:48:54] 2025-06-04 14:48:33,862 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:48:54] 2025-06-04 14:48:33,862 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:48:54] 2025-06-04 14:48:33,862 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:48:54] 2025-06-04 14:48:33,862 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:48:54] 2025-06-04 14:48:33,862 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:48:54] 2025-06-04 14:48:33,862 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:48:54] 2025-06-04 14:48:33,863 | INFO     | job 6678902907 has completed (purged errors)
[2025-06-04 10:48:54] 2025-06-04 14:48:33,863 | INFO     | overall cleanup function is called
[2025-06-04 10:48:54] 2025-06-04 14:48:34,869 | INFO     | --- collectZombieJob: --- 10, [3713104]
[2025-06-04 10:48:54] 2025-06-04 14:48:34,870 | INFO     | zombie collector waiting for pid 3713104
[2025-06-04 10:48:54] 2025-06-04 14:48:34,870 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:48:54] 2025-06-04 14:48:34,870 | INFO     | collected zombie processes
[2025-06-04 10:48:54] 2025-06-04 14:48:34,870 | INFO     | will attempt to kill all subprocesses of pid=3713104
[2025-06-04 10:48:54] 2025-06-04 14:48:35,121 | INFO     | process IDs to be killed: [3713104] (in reverse order)
[2025-06-04 10:48:54] 2025-06-04 14:48:35,213 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:48:54] 2025-06-04 14:48:35,214 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:48:54] 2025-06-04 14:48:35,225 | INFO     | did not find any defunct processes belonging to 3713104
[2025-06-04 10:48:54] 2025-06-04 14:48:35,237 | INFO     | did not find any defunct processes belonging to 3713104
[2025-06-04 10:48:54] 2025-06-04 14:48:35,237 | INFO     | ready for new job
[2025-06-04 10:48:54] 2025-06-04 14:48:35,237 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:48:54] 2025-06-04 14:48:35,239 | INFO     | **************************************
[2025-06-04 10:48:54] 2025-06-04 14:48:35,239 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:48:54] 2025-06-04 14:48:35,239 | INFO     | **************************************
[2025-06-04 10:48:54] 2025-06-04 14:48:35,239 | INFO     | 
[2025-06-04 10:48:54] 2025-06-04 14:48:35,254 | INFO     | architecture information:
[2025-06-04 10:48:54] 2025-06-04 14:48:35,254 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:48:54] 2025-06-04 14:48:35,271 | INFO     | cat /etc/os-release:
[2025-06-04 10:48:54] NAME="CentOS Linux"
[2025-06-04 10:48:54] VERSION="7 (Core)"
[2025-06-04 10:48:54] ID="centos"
[2025-06-04 10:48:54] ID_LIKE="rhel fedora"
[2025-06-04 10:48:54] VERSION_ID="7"
[2025-06-04 10:48:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:48:54] ANSI_COLOR="0;31"
[2025-06-04 10:48:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:48:54] HOME_URL="https://www.centos.org/"
[2025-06-04 10:48:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:48:54] 
[2025-06-04 10:48:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:48:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:48:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:48:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:48:54] 
[2025-06-04 10:48:54] 2025-06-04 14:48:35,272 | INFO     | **************************************
[2025-06-04 10:48:54] 2025-06-04 14:48:35,775 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 10:48:54] 2025-06-04 14:48:35,792 | INFO     | sufficient remaining disk space (76366741504 B)
[2025-06-04 10:48:54] 2025-06-04 14:48:35,793 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:48:54] 2025-06-04 14:48:35,793 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:48:54] 2025-06-04 14:48:35,793 | INFO     | update_server=False
[2025-06-04 10:48:54] 2025-06-04 14:48:35,793 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:48:54] 2025-06-04 14:48:35,794 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:48:54] 2025-06-04 14:48:35,794 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:48:54] 2025-06-04 14:48:35,794 | INFO     | aborting loop
[2025-06-04 10:48:54] 2025-06-04 14:48:35,851 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:48:54] 2025-06-04 14:48:35,851 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:48:54] 2025-06-04 14:48:35,851 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:48:54] 2025-06-04 14:48:36,120 | INFO     | all payload control threads have been joined
[2025-06-04 10:48:54] 2025-06-04 14:48:36,172 | INFO     | all job control threads have been joined
[2025-06-04 10:48:54] 2025-06-04 14:48:36,657 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:48:54] 2025-06-04 14:48:36,733 | INFO     | all data control threads have been joined
[2025-06-04 10:48:54] 2025-06-04 14:48:36,797 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:48:54] 2025-06-04 14:48:36,798 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:48:54] 2025-06-04 14:48:36,799 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:48:54] 2025-06-04 14:48:37,083 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:48:54] 2025-06-04 14:48:37,114 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:48:54] 2025-06-04 14:48:37,126 | INFO     | [payload] control thread has finished
[2025-06-04 10:48:54] 2025-06-04 14:48:37,177 | INFO     | [job] control thread has finished
[2025-06-04 10:48:54] 2025-06-04 14:48:37,234 | INFO     | [job] validate thread has finished
[2025-06-04 10:48:54] 2025-06-04 14:48:37,332 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:48:54] 2025-06-04 14:48:37,551 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:48:54] 2025-06-04 14:48:37,586 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:48:54] 2025-06-04 14:48:37,737 | INFO     | [data] control thread has finished
[2025-06-04 10:48:54] 2025-06-04 14:48:37,955 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:48:54] 2025-06-04 14:48:38,239 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:48:54] 2025-06-04 14:48:38,663 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:48:54] 2025-06-04 14:48:41,959 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:48:54] 2025-06-04 14:48:46,266 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:48:54] 2025-06-04 14:48:47,270 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:48:54] 2025-06-04 14:48:48,772 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139896667342656)>', '<ExcThread(monitor, started 139896169670400)>']
[2025-06-04 10:48:54] 2025-06-04 14:48:48,912 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:48:54] 2025-06-04 14:48:48,913 | INFO     | [monitor] control thread has ended
[2025-06-04 10:48:54] 2025-06-04 14:48:53,780 | INFO     | all workflow threads have been joined
[2025-06-04 10:48:54] 2025-06-04 14:48:53,781 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:48:54] 2025-06-04 14:48:53,781 | INFO     | traces error code: 0
[2025-06-04 10:48:54] 2025-06-04 14:48:53,781 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:48:54] 2025-06-04 14:48:53,930 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:48:54] 2025-06-04 14:48:53,932 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:48:54] 2025-06-04 14:48:53,934 [wrapper] pilotpid: 3706123
[2025-06-04 10:48:54] 2025-06-04 14:48:53,937 [wrapper] Pilot exit status: 0
[2025-06-04 10:48:54] 2025-06-04 14:48:53,947 [wrapper] pandaids: 6678902907
[2025-06-04 10:48:54] 2025-06-04 14:48:54,009 [wrapper] cleanup supervisor_pilot 3833477 3706124
[2025-06-04 10:48:54] 2025-06-04 14:48:54,012 [wrapper] Test setup, not cleaning
[2025-06-04 10:48:54] 2025-06-04 14:48:54,015 [wrapper] apfmon messages muted
[2025-06-04 10:48:54] 2025-06-04 14:48:54,018 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:48:54] 2025-06-04 14:48:54,020 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:48:54]  *** Error codes and diagnostics ***
[2025-06-04 10:48:54]     "exeErrorCode": 0,
[2025-06-04 10:48:54]     "exeErrorDiag": "",
[2025-06-04 10:48:54]     "pilotErrorCode": 0,
[2025-06-04 10:48:54]     "pilotErrorDiag": "",
[2025-06-04 10:48:54]  *** Listing of results directory ***
[2025-06-04 10:48:54] total 388892
[2025-06-04 10:48:54] -rwx------. 1 boincer umatlas     37140 Jun  4 04:31 runpilot2-wrapper.sh
[2025-06-04 10:48:54] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:31 pilot3.tar.gz
[2025-06-04 10:48:54] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:32 queuedata.json
[2025-06-04 10:48:54] -rw-r--r--. 1 boincer umatlas       100 Jun  4 09:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:48:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 09:52 run_atlas
[2025-06-04 10:48:54] -rw-r--r--. 1 boincer umatlas       105 Jun  4 09:52 job.xml
[2025-06-04 10:48:54] -rw-r--r--. 2 boincer umatlas 215210387 Jun  4 09:52 EVNT.45006593._000990.pool.root.1
[2025-06-04 10:48:54] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:52 start_atlas.sh
[2025-06-04 10:48:54] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 09:52 shared
[2025-06-04 10:48:54] -rw-r--r--. 2 boincer umatlas    508878 Jun  4 09:52 input.tar.gz
[2025-06-04 10:48:54] -rw-r--r--. 1 boincer umatlas         0 Jun  4 09:52 boinc_lockfile
[2025-06-04 10:48:54] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 09:52 pandaJob.out
[2025-06-04 10:48:54] -rw-------. 1 boincer umatlas    986819 Jun  4 09:52 agis_schedconf.cvmfs.json
[2025-06-04 10:48:54] -rw-------. 1 boincer umatlas   1598969 Jun  4 09:52 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:48:54] drwx------. 4 boincer umatlas      4096 Jun  4 09:52 pilot3
[2025-06-04 10:48:54] -rw-r--r--. 1 boincer umatlas      6841 Jun  4 10:40 init_data.xml
[2025-06-04 10:48:54] -rw-------. 1 boincer umatlas 177779818 Jun  4 10:47 HITS.45006595._055678.pool.root.1
[2025-06-04 10:48:54] -rw-r--r--. 1 boincer umatlas       529 Jun  4 10:47 boinc_task_state.xml
[2025-06-04 10:48:54] -rw-------. 1 boincer umatlas      1033 Jun  4 10:48 memory_monitor_summary.json
[2025-06-04 10:48:54] -rw-------. 1 boincer umatlas    355994 Jun  4 10:48 log.45006595._055678.job.log.tgz.1
[2025-06-04 10:48:54] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 10:48 boinc_mmap_file
[2025-06-04 10:48:54] -rw-r--r--. 1 boincer umatlas        27 Jun  4 10:48 wrapper_checkpoint.txt
[2025-06-04 10:48:54] -rw-------. 1 boincer umatlas      7708 Jun  4 10:48 heartbeat.json
[2025-06-04 10:48:54] -rw-------. 1 boincer umatlas        95 Jun  4 10:48 pilot_heartbeat.json
[2025-06-04 10:48:54] -rw-------. 1 boincer umatlas      4425 Jun  4 10:48 pilotlog.txt
[2025-06-04 10:48:54] -rw-------. 1 boincer umatlas    346769 Jun  4 10:48 log.45006595._055678.job.log.1
[2025-06-04 10:48:54] -rw-------. 1 boincer umatlas       357 Jun  4 10:48 output.list
[2025-06-04 10:48:54] -rw-r--r--. 1 boincer umatlas       620 Jun  4 10:48 runtime_log
[2025-06-04 10:48:54] -rw-------. 1 boincer umatlas    727040 Jun  4 10:48 result.tar.gz
[2025-06-04 10:48:54] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 10:48 runtime_log.err
[2025-06-04 10:48:54] -rw-------. 1 boincer umatlas       652 Jun  4 10:48 4aQNDmZiyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2mnKDmzQn5xn.diag
[2025-06-04 10:48:54] -rw-r--r--. 1 boincer umatlas     21302 Jun  4 10:48 stderr.txt
[2025-06-04 10:48:54] HITS file was successfully produced:
[2025-06-04 10:48:54] -rw-------. 1 boincer umatlas 177779818 Jun  4 10:47 shared/HITS.pool.root.1
[2025-06-04 10:48:54]  *** Contents of shared directory: ***
[2025-06-04 10:48:54] total 385012
[2025-06-04 10:48:54] -rw-r--r--. 2 boincer umatlas 215210387 Jun  4 09:52 ATLAS.root_0
[2025-06-04 10:48:54] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:52 start_atlas.sh
[2025-06-04 10:48:54] -rw-r--r--. 2 boincer umatlas    508878 Jun  4 09:52 input.tar.gz
[2025-06-04 10:48:54] -rw-------. 1 boincer umatlas 177779818 Jun  4 10:47 HITS.pool.root.1
[2025-06-04 10:48:54] -rw-------. 1 boincer umatlas    727040 Jun  4 10:48 result.tar.gz
10:48:55 (3702433): run_atlas exited; CPU time 31329.314614
10:48:55 (3702433): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN