Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:42:35 (1128330): wrapper (7.7.26015): starting
08:42:35 (1128330): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:42:35] Arguments: --nthreads 8
[2025-06-04 08:42:35] Threads: 8
[2025-06-04 08:42:35] Checking for CVMFS
[2025-06-04 08:42:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:42:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:42:36] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:42:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:42:36] 2.12.6.0 15283 31355 301416 146780 3 865 25886617 32503809 35060 16776704 0 400109194 99.702 298097116 36343 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:42:36] CVMFS is ok
[2025-06-04 08:42:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:42:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:42:36] Further information can be found at the LHC@home message board.
[2025-06-04 08:42:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:42:36] Checking for apptainer binary...
[2025-06-04 08:42:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:42:36] Running /usr/bin/apptainer --version
[2025-06-04 08:42:36] apptainer version 1.4.1-1.el9
[2025-06-04 08:42:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:42:36] c8-7-1.aglt2.org
[2025-06-04 08:42:36] apptainer works
[2025-06-04 08:42:36] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:42:36] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:42:36] Starting ATLAS job with PandaID=6678313220
[2025-06-04 08:42:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:35:45]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:35:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 09:35:45]  is_altstaged=None
[2025-06-04 09:35:45]  is_tar=False
[2025-06-04 09:35:45]  lfn=log.45006595._052314.job.log.tgz.1
[2025-06-04 09:35:45]  mtime=0
[2025-06-04 09:35:45]  protocol_id=None
[2025-06-04 09:35:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:35:45]  replicas=None
[2025-06-04 09:35:45]  scope=mc23_13p6TeV
[2025-06-04 09:35:45]  status=None
[2025-06-04 09:35:45]  status_code=0
[2025-06-04 09:35:45]  storage_token=
[2025-06-04 09:35:45]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6678313220/log.45006595._052314.job.log.tgz.1
[2025-06-04 09:35:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/4b/log.45006595._052314.job.log.tgz.1
[2025-06-04 09:35:45]  workdir=None
[2025-06-04 09:35:45] ]
[2025-06-04 09:35:45] 2025-06-04 13:35:20,274 | INFO     | transferring file log.45006595._052314.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6678313220/log.45006595._052314.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:35:45] 2025-06-04 13:35:20,274 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6678313220/log.45006595._052314.job.log.tgz.1 /tmp/boinchome/slots/3/log.45006595._052314.job
[2025-06-04 09:35:45] 2025-06-04 13:35:20,292 | INFO     | adding to output.list: log.45006595._052314.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/4b/log.45006595._052314.job.log.tg
[2025-06-04 09:35:45] 2025-06-04 13:35:20,292 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:35:45] 2025-06-04 13:35:20,292 | INFO     | summary of transferred files:
[2025-06-04 09:35:45] 2025-06-04 13:35:20,292 | INFO     |  -- lfn=log.45006595._052314.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:35:45] 2025-06-04 13:35:20,292 | INFO     | stage-out finished correctly
[2025-06-04 09:35:45] 2025-06-04 13:35:21,425 | INFO     | monitor loop #231: job 0:6678313220 is in state 'finished'
[2025-06-04 09:35:45] 2025-06-04 13:35:21,425 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:35:45] 2025-06-04 13:35:21,610 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:35:45] 2025-06-04 13:35:22,149 | INFO     | job 6678313220 has state=finished
[2025-06-04 09:35:45] 2025-06-04 13:35:22,150 | INFO     | preparing for final server update for job 6678313220 in state='finished'
[2025-06-04 09:35:45] 2025-06-04 13:35:22,150 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:35:45] 2025-06-04 13:35:22,150 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:35:45] 2025-06-04 13:35:22,150 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:35:45] 2025-06-04 13:35:22,150 | INFO     | job 6678313220 has finished - writing final server update
[2025-06-04 09:35:45] 2025-06-04 13:35:22,150 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:35:45] 2025-06-04 13:35:22,166 | INFO     | executing command: lscpu
[2025-06-04 09:35:45] 2025-06-04 13:35:22,239 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:35:45] 2025-06-04 13:35:23,928 | INFO     | monitor loop #232: job 0:6678313220 is in state 'finished'
[2025-06-04 09:35:45] 2025-06-04 13:35:23,928 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:35:45] 2025-06-04 13:35:26,070 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:35:45] 2025-06-04 13:35:26,072 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6678313220/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:35:45] 2025-06-04 13:35:26,073 | INFO     | extracted standard info from prmon json
[2025-06-04 09:35:45] 2025-06-04 13:35:26,073 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:35:45] 2025-06-04 13:35:26,073 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:35:45] 2025-06-04 13:35:26,073 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:35:45] 2025-06-04 13:35:26,073 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:35:45] 2025-06-04 13:35:26,074 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:35:45] 2025-06-04 13:35:26,074 | INFO     | sum of square deviations: 28242390.0
[2025-06-04 09:35:45] 2025-06-04 13:35:26,075 | INFO     | sum of deviations: 4375443990.0
[2025-06-04 09:35:45] 2025-06-04 13:35:26,075 | INFO     | mean x: 1749042638.0
[2025-06-04 09:35:45] 2025-06-04 13:35:26,075 | INFO     | mean y: 2175647.6
[2025-06-04 09:35:45] 2025-06-04 13:35:26,075 | INFO     | -- intersect: -270967742220.2166
[2025-06-04 09:35:45] 2025-06-04 13:35:26,075 | INFO     | intersect: -270967742220.2166
[2025-06-04 09:35:45] 2025-06-04 13:35:26,075 | INFO     | chi2: 0.8033379095202985
[2025-06-04 09:35:45] 2025-06-04 13:35:26,075 | INFO     | -- intersect: -270967742220.2166
[2025-06-04 09:35:45] 2025-06-04 13:35:26,075 | INFO     | current memory leak: 154.92 B/s (using 45 data points, chi2=0.80)
[2025-06-04 09:35:45] 2025-06-04 13:35:26,075 | INFO     | ..............................
[2025-06-04 09:35:45] 2025-06-04 13:35:26,075 | INFO     | . Timing measurements:
[2025-06-04 09:35:45] 2025-06-04 13:35:26,075 | INFO     | . get job = 0 s
[2025-06-04 09:35:45] 2025-06-04 13:35:26,075 | INFO     | . initial setup = 2 s
[2025-06-04 09:35:45] 2025-06-04 13:35:26,076 | INFO     | . payload setup = 6 s
[2025-06-04 09:35:45] 2025-06-04 13:35:26,076 | INFO     | . stage-in = 0 s
[2025-06-04 09:35:45] 2025-06-04 13:35:26,076 | INFO     | . payload execution = 3129 s
[2025-06-04 09:35:45] 2025-06-04 13:35:26,076 | INFO     | . stage-out = 0 s
[2025-06-04 09:35:45] 2025-06-04 13:35:26,076 | INFO     | . log creation = 0 s
[2025-06-04 09:35:45] 2025-06-04 13:35:26,076 | INFO     | ..............................
[2025-06-04 09:35:45] 2025-06-04 13:35:26,127 | INFO     | 
[2025-06-04 09:35:45] 2025-06-04 13:35:26,127 | INFO     | job summary report
[2025-06-04 09:35:45] 2025-06-04 13:35:26,128 | INFO     | --------------------------------------------------
[2025-06-04 09:35:45] 2025-06-04 13:35:26,128 | INFO     | PanDA job id: 6678313220
[2025-06-04 09:35:45] 2025-06-04 13:35:26,128 | INFO     | task id: 45006595
[2025-06-04 09:35:45] 2025-06-04 13:35:26,128 | INFO     | errors: (none)
[2025-06-04 09:35:45] 2025-06-04 13:35:26,128 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:35:45] 2025-06-04 13:35:26,128 | INFO     | pilot state: finished 
[2025-06-04 09:35:45] 2025-06-04 13:35:26,128 | INFO     | transexitcode: 0
[2025-06-04 09:35:45] 2025-06-04 13:35:26,128 | INFO     | exeerrorcode: 0
[2025-06-04 09:35:45] 2025-06-04 13:35:26,128 | INFO     | exeerrordiag: 
[2025-06-04 09:35:45] 2025-06-04 13:35:26,128 | INFO     | exitcode: 0
[2025-06-04 09:35:45] 2025-06-04 13:35:26,128 | INFO     | exitmsg: OK
[2025-06-04 09:35:45] 2025-06-04 13:35:26,128 | INFO     | cpuconsumptiontime: 20529 s
[2025-06-04 09:35:45] 2025-06-04 13:35:26,128 | INFO     | nevents: 400
[2025-06-04 09:35:45] 2025-06-04 13:35:26,128 | INFO     | neventsw: 0
[2025-06-04 09:35:45] 2025-06-04 13:35:26,128 | INFO     | pid: 1146484
[2025-06-04 09:35:45] 2025-06-04 13:35:26,128 | INFO     | pgrp: 1146484
[2025-06-04 09:35:45] 2025-06-04 13:35:26,128 | INFO     | corecount: 8
[2025-06-04 09:35:45] 2025-06-04 13:35:26,128 | INFO     | event service: False
[2025-06-04 09:35:45] 2025-06-04 13:35:26,128 | INFO     | sizes: {0: 2397171, 1: 2397370, 4: 2397576, 11: 2397604, 3139: 2431933, 3141: 2431933, 3145: 2432231}
[2025-06-04 09:35:45] 2025-06-04 13:35:26,128 | INFO     | --------------------------------------------------
[2025-06-04 09:35:45] 2025-06-04 13:35:26,128 | INFO     | 
[2025-06-04 09:35:45] 2025-06-04 13:35:26,128 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-04 09:35:45] 2025-06-04 13:35:26,145 | INFO     | PID=1134480 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 09:35:45] 2025-06-04 13:35:26,146 | INFO     | .. there are 61 such processes running
[2025-06-04 09:35:45] 2025-06-04 13:35:26,147 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:35:45] 2025-06-04 13:35:26,147 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:35:45] 2025-06-04 13:35:26,148 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:35:45] 2025-06-04 13:35:26,148 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:35:45] 2025-06-04 13:35:26,148 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:35:45] 2025-06-04 13:35:26,148 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:35:45] 2025-06-04 13:35:26,148 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:35:45] 2025-06-04 13:35:26,148 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:35:45] 2025-06-04 13:35:26,148 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:35:45] 2025-06-04 13:35:26,148 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:35:45] 2025-06-04 13:35:26,148 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:35:45] 2025-06-04 13:35:26,148 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:35:45] 2025-06-04 13:35:26,148 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:35:45] 2025-06-04 13:35:26,148 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:35:45] 2025-06-04 13:35:26,148 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:35:45] 2025-06-04 13:35:26,148 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:35:45] 2025-06-04 13:35:26,148 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:35:45] 2025-06-04 13:35:26,148 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:35:45] 2025-06-04 13:35:26,148 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:35:45] 2025-06-04 13:35:26,148 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:35:45] 2025-06-04 13:35:26,148 | INFO     | job 6678313220 has completed (purged errors)
[2025-06-04 09:35:45] 2025-06-04 13:35:26,148 | INFO     | overall cleanup function is called
[2025-06-04 09:35:45] 2025-06-04 13:35:27,155 | INFO     | --- collectZombieJob: --- 10, [1146484]
[2025-06-04 09:35:45] 2025-06-04 13:35:27,155 | INFO     | zombie collector waiting for pid 1146484
[2025-06-04 09:35:45] 2025-06-04 13:35:27,155 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:35:45] 2025-06-04 13:35:27,155 | INFO     | collected zombie processes
[2025-06-04 09:35:45] 2025-06-04 13:35:27,155 | INFO     | will attempt to kill all subprocesses of pid=1146484
[2025-06-04 09:35:45] 2025-06-04 13:35:27,597 | INFO     | process IDs to be killed: [1146484] (in reverse order)
[2025-06-04 09:35:45] 2025-06-04 13:35:27,760 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:35:45] 2025-06-04 13:35:27,761 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:35:45] 2025-06-04 13:35:27,786 | INFO     | did not find any defunct processes belonging to 1146484
[2025-06-04 09:35:45] 2025-06-04 13:35:27,812 | INFO     | did not find any defunct processes belonging to 1146484
[2025-06-04 09:35:45] 2025-06-04 13:35:27,812 | INFO     | ready for new job
[2025-06-04 09:35:45] 2025-06-04 13:35:27,812 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:35:45] 2025-06-04 13:35:27,813 | INFO     | **************************************
[2025-06-04 09:35:45] 2025-06-04 13:35:27,813 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:35:45] 2025-06-04 13:35:27,813 | INFO     | **************************************
[2025-06-04 09:35:45] 2025-06-04 13:35:27,813 | INFO     | 
[2025-06-04 09:35:45] 2025-06-04 13:35:27,831 | INFO     | architecture information:
[2025-06-04 09:35:45] 2025-06-04 13:35:27,831 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:35:45] 2025-06-04 13:35:27,845 | INFO     | cat /etc/os-release:
[2025-06-04 09:35:45] NAME="CentOS Linux"
[2025-06-04 09:35:45] VERSION="7 (Core)"
[2025-06-04 09:35:45] ID="centos"
[2025-06-04 09:35:45] ID_LIKE="rhel fedora"
[2025-06-04 09:35:45] VERSION_ID="7"
[2025-06-04 09:35:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:35:45] ANSI_COLOR="0;31"
[2025-06-04 09:35:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:35:45] HOME_URL="https://www.centos.org/"
[2025-06-04 09:35:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:35:45] 
[2025-06-04 09:35:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:35:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:35:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:35:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:35:45] 
[2025-06-04 09:35:45] 2025-06-04 13:35:27,845 | INFO     | **************************************
[2025-06-04 09:35:45] 2025-06-04 13:35:28,348 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-04 09:35:45] 2025-06-04 13:35:28,365 | INFO     | sufficient remaining disk space (94746181632 B)
[2025-06-04 09:35:45] 2025-06-04 13:35:28,365 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:35:45] 2025-06-04 13:35:28,366 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:35:45] 2025-06-04 13:35:28,366 | INFO     | update_server=False
[2025-06-04 09:35:45] 2025-06-04 13:35:28,366 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:35:45] 2025-06-04 13:35:28,366 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:35:45] 2025-06-04 13:35:28,366 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:35:45] 2025-06-04 13:35:28,366 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:35:45] 2025-06-04 13:35:28,366 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:35:45] 2025-06-04 13:35:28,366 | INFO     | aborting loop
[2025-06-04 09:35:45] 2025-06-04 13:35:28,367 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:35:45] 2025-06-04 13:35:28,367 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:35:45] 2025-06-04 13:35:28,367 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:35:45] 2025-06-04 13:35:28,568 | INFO     | all job control threads have been joined
[2025-06-04 09:35:45] 2025-06-04 13:35:28,933 | INFO     | all data control threads have been joined
[2025-06-04 09:35:45] 2025-06-04 13:35:29,371 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:35:45] 2025-06-04 13:35:29,372 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:35:45] 2025-06-04 13:35:29,477 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:35:45] 2025-06-04 13:35:29,529 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:35:45] 2025-06-04 13:35:29,573 | INFO     | [job] control thread has finished
[2025-06-04 09:35:45] 2025-06-04 13:35:29,772 | INFO     | all payload control threads have been joined
[2025-06-04 09:35:45] 2025-06-04 13:35:29,938 | INFO     | [data] control thread has finished
[2025-06-04 09:35:45] 2025-06-04 13:35:30,030 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:35:45] 2025-06-04 13:35:30,037 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:35:45] 2025-06-04 13:35:30,042 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:35:45] 2025-06-04 13:35:30,176 | INFO     | [job] validate thread has finished
[2025-06-04 09:35:45] 2025-06-04 13:35:30,332 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:35:45] 2025-06-04 13:35:30,372 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:35:45] 2025-06-04 13:35:30,777 | INFO     | [payload] control thread has finished
[2025-06-04 09:35:45] 2025-06-04 13:35:31,137 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:35:45] 2025-06-04 13:35:32,142 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:35:45] 2025-06-04 13:35:32,375 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:35:45] 2025-06-04 13:35:39,107 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:35:45] 2025-06-04 13:35:40,112 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:35:45] 2025-06-04 13:35:40,525 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139766850783040)>', '<ExcThread(monitor, started 139766062368512)>']
[2025-06-04 09:35:45] 2025-06-04 13:35:41,425 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:35:45] 2025-06-04 13:35:41,425 | INFO     | [monitor] control thread has ended
[2025-06-04 09:35:45] 2025-06-04 13:35:45,550 | INFO     | all workflow threads have been joined
[2025-06-04 09:35:45] 2025-06-04 13:35:45,552 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:35:45] 2025-06-04 13:35:45,552 | INFO     | traces error code: 0
[2025-06-04 09:35:45] 2025-06-04 13:35:45,552 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:35:45] 2025-06-04 13:35:45,718 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:35:45] 2025-06-04 13:35:45,720 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:35:45] 2025-06-04 13:35:45,724 [wrapper] pilotpid: 1134480
[2025-06-04 09:35:45] 2025-06-04 13:35:45,726 [wrapper] Pilot exit status: 0
[2025-06-04 09:35:45] 2025-06-04 13:35:45,736 [wrapper] pandaids: 6678313220
[2025-06-04 09:35:45] 2025-06-04 13:35:45,863 [wrapper] cleanup supervisor_pilot 2843545 1134481
[2025-06-04 09:35:45] 2025-06-04 13:35:45,866 [wrapper] Test setup, not cleaning
[2025-06-04 09:35:45] 2025-06-04 13:35:45,869 [wrapper] apfmon messages muted
[2025-06-04 09:35:45] 2025-06-04 13:35:45,871 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:35:45] 2025-06-04 13:35:45,874 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:35:45]  *** Error codes and diagnostics ***
[2025-06-04 09:35:45]     "exeErrorCode": 0,
[2025-06-04 09:35:45]     "exeErrorDiag": "",
[2025-06-04 09:35:45]     "pilotErrorCode": 0,
[2025-06-04 09:35:45]     "pilotErrorDiag": "",
[2025-06-04 09:35:45]  *** Listing of results directory ***
[2025-06-04 09:35:45] total 389208
[2025-06-04 09:35:45] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 00:04 pilot3.tar.gz
[2025-06-04 09:35:45] -rwx------. 1 boincer umatlas     37140 Jun  4 00:19 runpilot2-wrapper.sh
[2025-06-04 09:35:45] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 00:19 queuedata.json
[2025-06-04 09:35:45] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:35:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:42 run_atlas
[2025-06-04 09:35:45] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:42 job.xml
[2025-06-04 09:35:45] -rw-r--r--. 2 boincer umatlas 214287665 Jun  4 08:42 EVNT.45006593._002095.pool.root.1
[2025-06-04 09:35:45] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:42 start_atlas.sh
[2025-06-04 09:35:45] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:42 shared
[2025-06-04 09:35:45] -rw-r--r--. 2 boincer umatlas    508870 Jun  4 08:42 input.tar.gz
[2025-06-04 09:35:45] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:42 boinc_lockfile
[2025-06-04 09:35:45] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 08:42 pandaJob.out
[2025-06-04 09:35:45] -rw-------. 1 boincer umatlas    986811 Jun  4 08:42 agis_schedconf.cvmfs.json
[2025-06-04 09:35:45] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:42 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:35:45] drwx------. 4 boincer umatlas      4096 Jun  4 08:42 pilot3
[2025-06-04 09:35:45] -rw-r--r--. 1 boincer umatlas      7159 Jun  4 09:30 init_data.xml
[2025-06-04 09:35:45] -rw-------. 1 boincer umatlas        95 Jun  4 09:34 pilot_heartbeat.json
[2025-06-04 09:35:45] -rw-------. 1 boincer umatlas 179201312 Jun  4 09:34 HITS.45006595._052314.pool.root.1
[2025-06-04 09:35:45] -rw-r--r--. 1 boincer umatlas       530 Jun  4 09:35 boinc_task_state.xml
[2025-06-04 09:35:45] -rw-------. 1 boincer umatlas      1036 Jun  4 09:35 memory_monitor_summary.json
[2025-06-04 09:35:45] -rw-------. 1 boincer umatlas    289441 Jun  4 09:35 log.45006595._052314.job.log.tgz.1
[2025-06-04 09:35:45] -rw-------. 1 boincer umatlas      7687 Jun  4 09:35 heartbeat.json
[2025-06-04 09:35:45] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:35 boinc_mmap_file
[2025-06-04 09:35:45] -rw-r--r--. 1 boincer umatlas        27 Jun  4 09:35 wrapper_checkpoint.txt
[2025-06-04 09:35:45] -rw-------. 1 boincer umatlas      4548 Jun  4 09:35 pilotlog.txt
[2025-06-04 09:35:45] -rw-------. 1 boincer umatlas    327441 Jun  4 09:35 log.45006595._052314.job.log.1
[2025-06-04 09:35:45] -rw-------. 1 boincer umatlas       357 Jun  4 09:35 output.list
[2025-06-04 09:35:45] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:35 runtime_log
[2025-06-04 09:35:45] -rw-------. 1 boincer umatlas    634880 Jun  4 09:35 result.tar.gz
[2025-06-04 09:35:45] -rw-r--r--. 1 boincer umatlas      8649 Jun  4 09:35 runtime_log.err
[2025-06-04 09:35:45] -rw-------. 1 boincer umatlas       649 Jun  4 09:35 QlXLDm8lug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCCnKDmsTEPLn.diag
[2025-06-04 09:35:45] -rw-r--r--. 1 boincer umatlas     21411 Jun  4 09:35 stderr.txt
[2025-06-04 09:35:45] HITS file was successfully produced:
[2025-06-04 09:35:45] -rw-------. 1 boincer umatlas 179201312 Jun  4 09:34 shared/HITS.pool.root.1
[2025-06-04 09:35:45]  *** Contents of shared directory: ***
[2025-06-04 09:35:45] total 385412
[2025-06-04 09:35:45] -rw-r--r--. 2 boincer umatlas 214287665 Jun  4 08:42 ATLAS.root_0
[2025-06-04 09:35:45] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:42 start_atlas.sh
[2025-06-04 09:35:45] -rw-r--r--. 2 boincer umatlas    508870 Jun  4 08:42 input.tar.gz
[2025-06-04 09:35:45] -rw-------. 1 boincer umatlas 179201312 Jun  4 09:34 HITS.pool.root.1
[2025-06-04 09:35:45] -rw-------. 1 boincer umatlas    634880 Jun  4 09:35 result.tar.gz
09:35:47 (1128330): run_atlas exited; CPU time 20624.009786
09:35:47 (1128330): called boinc_finish(0)

</stderr_txt>
]]>

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