Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:47:59 (3363798): wrapper (7.7.26015): starting
08:47:59 (3363798): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:47:59] Arguments: --nthreads 8
[2025-06-04 08:47:59] Threads: 8
[2025-06-04 08:47:59] Checking for CVMFS
[2025-06-04 08:48:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:48:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:48:00] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:48:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:48:00] 2.12.6.0 8521 37328 529428 146780 3 685 33311688 40960001 20140 16776704 1 351385610 99.740 235357109 19108 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:48:00] CVMFS is ok
[2025-06-04 08:48:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:48:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:48:00] Further information can be found at the LHC@home message board.
[2025-06-04 08:48:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:48:00] Checking for apptainer binary...
[2025-06-04 08:48:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:48:00] Running /usr/bin/apptainer --version
[2025-06-04 08:48:00] apptainer version 1.4.1-1.el9
[2025-06-04 08:48:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:48:00] c7-4-30.aglt2.org
[2025-06-04 08:48:00] apptainer works
[2025-06-04 08:48:00] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:48:00] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:48:00] Starting ATLAS job with PandaID=6678974899
[2025-06-04 08:48:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:47:12]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:47:12]  is_tar=False
[2025-06-04 09:47:12]  lfn=log.45006595._055726.job.log.tgz.1
[2025-06-04 09:47:12]  mtime=0
[2025-06-04 09:47:12]  protocol_id=None
[2025-06-04 09:47:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:47:12]  replicas=None
[2025-06-04 09:47:12]  scope=mc23_13p6TeV
[2025-06-04 09:47:12]  status=None
[2025-06-04 09:47:12]  status_code=0
[2025-06-04 09:47:12]  storage_token=
[2025-06-04 09:47:12]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678974899/log.45006595._055726.job.log.tgz.1
[2025-06-04 09:47:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/61/log.45006595._055726.job.log.tgz.1
[2025-06-04 09:47:12]  workdir=None
[2025-06-04 09:47:12] ]
[2025-06-04 09:47:12] 2025-06-04 13:46:47,602 | INFO     | transferring file log.45006595._055726.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678974899/log.45006595._055726.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:47:12] 2025-06-04 13:46:47,603 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678974899/log.45006595._055726.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._055726.job
[2025-06-04 09:47:12] 2025-06-04 13:46:47,622 | INFO     | adding to output.list: log.45006595._055726.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/61/log.45006595._055726.job.log.tg
[2025-06-04 09:47:12] 2025-06-04 13:46:47,622 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:47:12] 2025-06-04 13:46:47,623 | INFO     | summary of transferred files:
[2025-06-04 09:47:12] 2025-06-04 13:46:47,623 | INFO     |  -- lfn=log.45006595._055726.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:47:12] 2025-06-04 13:46:47,623 | INFO     | stage-out finished correctly
[2025-06-04 09:47:12] 2025-06-04 13:46:48,102 | INFO     | number of running child processes to parent process 3374361: 1
[2025-06-04 09:47:12] 2025-06-04 13:46:48,102 | INFO     | maximum number of monitored processes: 6
[2025-06-04 09:47:12] 2025-06-04 13:46:48,587 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:47:12] 2025-06-04 13:46:48,744 | INFO     | job 6678974899 has state=finished
[2025-06-04 09:47:12] 2025-06-04 13:46:48,744 | INFO     | preparing for final server update for job 6678974899 in state='finished'
[2025-06-04 09:47:12] 2025-06-04 13:46:48,745 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:47:12] 2025-06-04 13:46:48,745 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:47:12] 2025-06-04 13:46:48,745 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:47:12] 2025-06-04 13:46:48,745 | INFO     | job 6678974899 has finished - writing final server update
[2025-06-04 09:47:12] 2025-06-04 13:46:48,745 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:47:12] 2025-06-04 13:46:48,763 | INFO     | executing command: lscpu
[2025-06-04 09:47:12] 2025-06-04 13:46:48,850 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:47:12] 2025-06-04 13:46:50,604 | INFO     | monitor loop #259: job 0:6678974899 is in state 'finished'
[2025-06-04 09:47:12] 2025-06-04 13:46:50,604 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:47:12] 2025-06-04 13:46:52,913 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 09:47:12] 2025-06-04 13:46:52,913 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678974899/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:47:12] 2025-06-04 13:46:52,914 | INFO     | extracted standard info from prmon json
[2025-06-04 09:47:12] 2025-06-04 13:46:52,914 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:47:12] 2025-06-04 13:46:52,914 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:47:12] 2025-06-04 13:46:52,914 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:47:12] 2025-06-04 13:46:52,914 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:47:12] 2025-06-04 13:46:52,916 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:47:12] 2025-06-04 13:46:52,916 | INFO     | sum of square deviations: 41117050.0
[2025-06-04 09:47:12] 2025-06-04 13:46:52,916 | INFO     | sum of deviations: 2916249630.9999995
[2025-06-04 09:47:12] 2025-06-04 13:46:52,916 | INFO     | mean x: 1749043145.0
[2025-06-04 09:47:12] 2025-06-04 13:46:52,916 | INFO     | mean y: 2195363.9215686275
[2025-06-04 09:47:12] 2025-06-04 13:46:52,916 | INFO     | -- intersect: -124049662106.62479
[2025-06-04 09:47:12] 2025-06-04 13:46:52,916 | INFO     | intersect: -124049662106.62479
[2025-06-04 09:47:12] 2025-06-04 13:46:52,916 | INFO     | chi2: 0.8036997346047626
[2025-06-04 09:47:12] 2025-06-04 13:46:52,916 | INFO     | -- intersect: -124049662106.62479
[2025-06-04 09:47:12] 2025-06-04 13:46:52,916 | INFO     | current memory leak: 70.93 B/s (using 51 data points, chi2=0.80)
[2025-06-04 09:47:12] 2025-06-04 13:46:52,917 | INFO     | ..............................
[2025-06-04 09:47:12] 2025-06-04 13:46:52,917 | INFO     | . Timing measurements:
[2025-06-04 09:47:12] 2025-06-04 13:46:52,917 | INFO     | . get job = 0 s
[2025-06-04 09:47:12] 2025-06-04 13:46:52,917 | INFO     | . initial setup = 2 s
[2025-06-04 09:47:12] 2025-06-04 13:46:52,917 | INFO     | . payload setup = 6 s
[2025-06-04 09:47:12] 2025-06-04 13:46:52,917 | INFO     | . stage-in = 0 s
[2025-06-04 09:47:12] 2025-06-04 13:46:52,917 | INFO     | . payload execution = 3495 s
[2025-06-04 09:47:12] 2025-06-04 13:46:52,917 | INFO     | . stage-out = 0 s
[2025-06-04 09:47:12] 2025-06-04 13:46:52,917 | INFO     | . log creation = 0 s
[2025-06-04 09:47:12] 2025-06-04 13:46:52,917 | INFO     | ..............................
[2025-06-04 09:47:12] 2025-06-04 13:46:52,987 | INFO     | 
[2025-06-04 09:47:12] 2025-06-04 13:46:52,987 | INFO     | job summary report
[2025-06-04 09:47:12] 2025-06-04 13:46:52,987 | INFO     | --------------------------------------------------
[2025-06-04 09:47:12] 2025-06-04 13:46:52,987 | INFO     | PanDA job id: 6678974899
[2025-06-04 09:47:12] 2025-06-04 13:46:52,987 | INFO     | task id: 45006595
[2025-06-04 09:47:12] 2025-06-04 13:46:52,987 | INFO     | errors: (none)
[2025-06-04 09:47:12] 2025-06-04 13:46:52,988 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:47:12] 2025-06-04 13:46:52,988 | INFO     | pilot state: finished 
[2025-06-04 09:47:12] 2025-06-04 13:46:52,988 | INFO     | transexitcode: 0
[2025-06-04 09:47:12] 2025-06-04 13:46:52,988 | INFO     | exeerrorcode: 0
[2025-06-04 09:47:12] 2025-06-04 13:46:52,988 | INFO     | exeerrordiag: 
[2025-06-04 09:47:12] 2025-06-04 13:46:52,988 | INFO     | exitcode: 0
[2025-06-04 09:47:12] 2025-06-04 13:46:52,988 | INFO     | exitmsg: OK
[2025-06-04 09:47:12] 2025-06-04 13:46:52,988 | INFO     | cpuconsumptiontime: 23080 s
[2025-06-04 09:47:12] 2025-06-04 13:46:52,988 | INFO     | nevents: 400
[2025-06-04 09:47:12] 2025-06-04 13:46:52,988 | INFO     | neventsw: 0
[2025-06-04 09:47:12] 2025-06-04 13:46:52,988 | INFO     | pid: 3374361
[2025-06-04 09:47:12] 2025-06-04 13:46:52,988 | INFO     | pgrp: 3374361
[2025-06-04 09:47:12] 2025-06-04 13:46:52,988 | INFO     | corecount: 8
[2025-06-04 09:47:12] 2025-06-04 13:46:52,988 | INFO     | event service: False
[2025-06-04 09:47:12] 2025-06-04 13:46:52,988 | INFO     | sizes: {0: 2397121, 1: 2397320, 5: 2397526, 11: 2397582, 3501: 2423211, 3502: 2423210, 3503: 2432335, 3504: 2432391, 3508: 2432561}
[2025-06-04 09:47:12] 2025-06-04 13:46:52,988 | INFO     | --------------------------------------------------
[2025-06-04 09:47:12] 2025-06-04 13:46:52,988 | INFO     | 
[2025-06-04 09:47:12] 2025-06-04 13:46:52,989 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 09:47:12] 2025-06-04 13:46:53,009 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:47:12] 2025-06-04 13:46:53,009 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:47:12] 2025-06-04 13:46:53,009 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:47:12] 2025-06-04 13:46:53,009 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:47:12] 2025-06-04 13:46:53,009 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:47:12] 2025-06-04 13:46:53,009 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:47:12] 2025-06-04 13:46:53,009 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:47:12] 2025-06-04 13:46:53,009 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:47:12] 2025-06-04 13:46:53,009 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:47:12] 2025-06-04 13:46:53,010 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:47:12] 2025-06-04 13:46:53,010 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:47:12] 2025-06-04 13:46:53,010 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:47:12] 2025-06-04 13:46:53,010 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:47:12] 2025-06-04 13:46:53,010 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:47:12] 2025-06-04 13:46:53,010 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:47:12] 2025-06-04 13:46:53,010 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:47:12] 2025-06-04 13:46:53,011 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:47:12] 2025-06-04 13:46:53,011 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:47:12] 2025-06-04 13:46:53,011 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:47:12] 2025-06-04 13:46:53,011 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:47:12] 2025-06-04 13:46:53,012 | INFO     | job 6678974899 has completed (purged errors)
[2025-06-04 09:47:12] 2025-06-04 13:46:53,012 | INFO     | overall cleanup function is called
[2025-06-04 09:47:12] 2025-06-04 13:46:54,019 | INFO     | --- collectZombieJob: --- 10, [3374361]
[2025-06-04 09:47:12] 2025-06-04 13:46:54,019 | INFO     | zombie collector waiting for pid 3374361
[2025-06-04 09:47:12] 2025-06-04 13:46:54,019 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:47:12] 2025-06-04 13:46:54,019 | INFO     | collected zombie processes
[2025-06-04 09:47:12] 2025-06-04 13:46:54,019 | INFO     | will attempt to kill all subprocesses of pid=3374361
[2025-06-04 09:47:12] 2025-06-04 13:46:54,340 | INFO     | process IDs to be killed: [3374361] (in reverse order)
[2025-06-04 09:47:12] 2025-06-04 13:46:54,488 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:47:12] 2025-06-04 13:46:54,488 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:47:12] 2025-06-04 13:46:54,510 | INFO     | did not find any defunct processes belonging to 3374361
[2025-06-04 09:47:12] 2025-06-04 13:46:54,564 | INFO     | did not find any defunct processes belonging to 3374361
[2025-06-04 09:47:12] 2025-06-04 13:46:54,564 | INFO     | ready for new job
[2025-06-04 09:47:12] 2025-06-04 13:46:54,564 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:47:12] 2025-06-04 13:46:54,565 | INFO     | **************************************
[2025-06-04 09:47:12] 2025-06-04 13:46:54,566 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:47:12] 2025-06-04 13:46:54,566 | INFO     | **************************************
[2025-06-04 09:47:12] 2025-06-04 13:46:54,566 | INFO     | 
[2025-06-04 09:47:12] 2025-06-04 13:46:54,587 | INFO     | architecture information:
[2025-06-04 09:47:12] 2025-06-04 13:46:54,588 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:47:12] 2025-06-04 13:46:54,603 | INFO     | cat /etc/os-release:
[2025-06-04 09:47:12] NAME="CentOS Linux"
[2025-06-04 09:47:12] VERSION="7 (Core)"
[2025-06-04 09:47:12] ID="centos"
[2025-06-04 09:47:12] ID_LIKE="rhel fedora"
[2025-06-04 09:47:12] VERSION_ID="7"
[2025-06-04 09:47:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:47:12] ANSI_COLOR="0;31"
[2025-06-04 09:47:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:47:12] HOME_URL="https://www.centos.org/"
[2025-06-04 09:47:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:47:12] 
[2025-06-04 09:47:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:47:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:47:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:47:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:47:12] 
[2025-06-04 09:47:12] 2025-06-04 13:46:54,604 | INFO     | **************************************
[2025-06-04 09:47:12] 2025-06-04 13:46:55,098 | INFO     | PID=3367431 has CPU usage=17.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 09:47:12] 2025-06-04 13:46:55,098 | INFO     | .. there are 32 such processes running
[2025-06-04 09:47:12] 2025-06-04 13:46:55,107 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 09:47:12] 2025-06-04 13:46:55,127 | INFO     | sufficient remaining disk space (128756744192 B)
[2025-06-04 09:47:12] 2025-06-04 13:46:55,127 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:47:12] 2025-06-04 13:46:55,127 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:47:12] 2025-06-04 13:46:55,127 | INFO     | update_server=False
[2025-06-04 09:47:12] 2025-06-04 13:46:55,127 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:47:12] 2025-06-04 13:46:55,127 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:47:12] 2025-06-04 13:46:55,128 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:47:12] 2025-06-04 13:46:55,128 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:47:12] 2025-06-04 13:46:55,128 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:47:12] 2025-06-04 13:46:55,129 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:47:12] 2025-06-04 13:46:55,241 | INFO     | all job control threads have been joined
[2025-06-04 09:47:12] 2025-06-04 13:46:55,617 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 09:47:12] 2025-06-04 13:46:55,617 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 09:47:12] 2025-06-04 13:46:55,617 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:47:12] 2025-06-04 13:46:55,617 | INFO     | will abort loop
[2025-06-04 09:47:12] 2025-06-04 13:46:55,703 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:47:12] 2025-06-04 13:46:55,965 | INFO     | all data control threads have been joined
[2025-06-04 09:47:12] 2025-06-04 13:46:56,133 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:47:12] 2025-06-04 13:46:56,247 | INFO     | [job] control thread has finished
[2025-06-04 09:47:12] 2025-06-04 13:46:56,279 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:47:12] 2025-06-04 13:46:56,582 | INFO     | all payload control threads have been joined
[2025-06-04 09:47:12] 2025-06-04 13:46:56,622 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:47:12] 2025-06-04 13:46:56,844 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:47:12] 2025-06-04 13:46:56,970 | INFO     | [data] control thread has finished
[2025-06-04 09:47:12] 2025-06-04 13:46:57,008 | INFO     | [job] validate thread has finished
[2025-06-04 09:47:12] 2025-06-04 13:46:57,010 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:47:12] 2025-06-04 13:46:57,242 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:47:12] 2025-06-04 13:46:57,253 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:47:12] 2025-06-04 13:46:57,305 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:47:12] 2025-06-04 13:46:57,587 | INFO     | [payload] control thread has finished
[2025-06-04 09:47:12] 2025-06-04 13:46:57,708 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:47:12] 2025-06-04 13:46:57,996 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:47:12] 2025-06-04 13:46:59,001 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:47:12] 2025-06-04 13:46:59,134 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:47:12] 2025-06-04 13:47:05,713 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:47:12] 2025-06-04 13:47:06,718 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:47:12] 2025-06-04 13:47:07,260 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140150690809664)>', '<ExcThread(monitor, started 140150185113344)>']
[2025-06-04 09:47:12] 2025-06-04 13:47:08,180 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:47:12] 2025-06-04 13:47:08,181 | INFO     | [monitor] control thread has ended
[2025-06-04 09:47:12] 2025-06-04 13:47:12,284 | INFO     | all workflow threads have been joined
[2025-06-04 09:47:12] 2025-06-04 13:47:12,284 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:47:12] 2025-06-04 13:47:12,285 | INFO     | traces error code: 0
[2025-06-04 09:47:12] 2025-06-04 13:47:12,285 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:47:12] 2025-06-04 13:47:12,412 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:47:12] 2025-06-04 13:47:12,415 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:47:12] 2025-06-04 13:47:12,418 [wrapper] pilotpid: 3367431
[2025-06-04 09:47:12] 2025-06-04 13:47:12,421 [wrapper] Pilot exit status: 0
[2025-06-04 09:47:12] 2025-06-04 13:47:12,433 [wrapper] pandaids: 6678974899
[2025-06-04 09:47:12] 2025-06-04 13:47:12,533 [wrapper] cleanup supervisor_pilot 3518143 3367432
[2025-06-04 09:47:12] 2025-06-04 13:47:12,537 [wrapper] Test setup, not cleaning
[2025-06-04 09:47:12] 2025-06-04 13:47:12,539 [wrapper] apfmon messages muted
[2025-06-04 09:47:12] 2025-06-04 13:47:12,542 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:47:12] 2025-06-04 13:47:12,545 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:47:12]  *** Error codes and diagnostics ***
[2025-06-04 09:47:12]     "exeErrorCode": 0,
[2025-06-04 09:47:12]     "exeErrorDiag": "",
[2025-06-04 09:47:12]     "pilotErrorCode": 0,
[2025-06-04 09:47:12]     "pilotErrorDiag": "",
[2025-06-04 09:47:12]  *** Listing of results directory ***
[2025-06-04 09:47:12] total 383960
[2025-06-04 09:47:12] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:31 pilot3.tar.gz
[2025-06-04 09:47:12] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:32 queuedata.json
[2025-06-04 09:47:12] -rwx------. 1 boincer umatlas     37140 Jun  4 04:32 runpilot2-wrapper.sh
[2025-06-04 09:47:12] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:47:12] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:47 run_atlas
[2025-06-04 09:47:12] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:47 job.xml
[2025-06-04 09:47:12] -rw-r--r--. 2 boincer umatlas 213934058 Jun  4 08:47 EVNT.45006593._001064.pool.root.1
[2025-06-04 09:47:12] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:47 start_atlas.sh
[2025-06-04 09:47:12] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:47 shared
[2025-06-04 09:47:12] -rw-r--r--. 2 boincer umatlas    508879 Jun  4 08:47 input.tar.gz
[2025-06-04 09:47:12] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:47 boinc_lockfile
[2025-06-04 09:47:12] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 08:48 pandaJob.out
[2025-06-04 09:47:12] -rw-------. 1 boincer umatlas    986811 Jun  4 08:48 agis_schedconf.cvmfs.json
[2025-06-04 09:47:12] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:48 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:47:12] drwx------. 4 boincer umatlas      4096 Jun  4 08:48 pilot3
[2025-06-04 09:47:12] -rw-r--r--. 1 boincer umatlas      6935 Jun  4 09:39 init_data.xml
[2025-06-04 09:47:12] -rw-r--r--. 1 boincer umatlas       529 Jun  4 09:46 boinc_task_state.xml
[2025-06-04 09:47:12] -rw-------. 1 boincer umatlas 174117562 Jun  4 09:46 HITS.45006595._055726.pool.root.1
[2025-06-04 09:47:12] -rw-------. 1 boincer umatlas        95 Jun  4 09:46 pilot_heartbeat.json
[2025-06-04 09:47:12] -rw-------. 1 boincer umatlas      1031 Jun  4 09:46 memory_monitor_summary.json
[2025-06-04 09:47:12] -rw-------. 1 boincer umatlas    287956 Jun  4 09:46 log.45006595._055726.job.log.tgz.1
[2025-06-04 09:47:12] -rw-------. 1 boincer umatlas      7682 Jun  4 09:46 heartbeat.json
[2025-06-04 09:47:12] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:47 boinc_mmap_file
[2025-06-04 09:47:12] -rw-------. 1 boincer umatlas      5131 Jun  4 09:47 pilotlog.txt
[2025-06-04 09:47:12] -rw-r--r--. 1 boincer umatlas        27 Jun  4 09:47 wrapper_checkpoint.txt
[2025-06-04 09:47:12] -rw-------. 1 boincer umatlas    355387 Jun  4 09:47 log.45006595._055726.job.log.1
[2025-06-04 09:47:12] -rw-------. 1 boincer umatlas       357 Jun  4 09:47 output.list
[2025-06-04 09:47:12] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:47 runtime_log
[2025-06-04 09:47:12] -rw-------. 1 boincer umatlas    665600 Jun  4 09:47 result.tar.gz
[2025-06-04 09:47:12] -rw-------. 1 boincer umatlas       650 Jun  4 09:47 UgILDmYjyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmonnKDmi3SHVn.diag
[2025-06-04 09:47:12] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 09:47 runtime_log.err
[2025-06-04 09:47:12] -rw-r--r--. 1 boincer umatlas     21537 Jun  4 09:47 stderr.txt
[2025-06-04 09:47:12] HITS file was successfully produced:
[2025-06-04 09:47:12] -rw-------. 1 boincer umatlas 174117562 Jun  4 09:46 shared/HITS.pool.root.1
[2025-06-04 09:47:12]  *** Contents of shared directory: ***
[2025-06-04 09:47:12] total 380136
[2025-06-04 09:47:12] -rw-r--r--. 2 boincer umatlas 213934058 Jun  4 08:47 ATLAS.root_0
[2025-06-04 09:47:12] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:47 start_atlas.sh
[2025-06-04 09:47:12] -rw-r--r--. 2 boincer umatlas    508879 Jun  4 08:47 input.tar.gz
[2025-06-04 09:47:12] -rw-------. 1 boincer umatlas 174117562 Jun  4 09:46 HITS.pool.root.1
[2025-06-04 09:47:12] -rw-------. 1 boincer umatlas    665600 Jun  4 09:47 result.tar.gz
09:47:14 (3363798): run_atlas exited; CPU time 23199.886801
09:47:14 (3363798): called boinc_finish(0)

</stderr_txt>
]]>

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