Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:38:35 (2253170): wrapper (7.7.26015): starting
08:38:35 (2253170): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:38:35] Arguments: --nthreads 8
[2025-06-04 08:38:35] Threads: 8
[2025-06-04 08:38:35] Checking for CVMFS
[2025-06-04 08:38:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:38:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:38:35] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:38:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:38:36] 2.12.6.0 5760 1348 163348 146780 1 199 24152355 40960001 14681 16776704 0 16058359 99.881 3629471 29472 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:38:36] CVMFS is ok
[2025-06-04 08:38:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:38:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:38:36] Further information can be found at the LHC@home message board.
[2025-06-04 08:38:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:38:36] Checking for apptainer binary...
[2025-06-04 08:38:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:38:36] Running /usr/bin/apptainer --version
[2025-06-04 08:38:36] apptainer version 1.4.1-1.el9
[2025-06-04 08:38:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:38:36] c7-3-35.aglt2.org
[2025-06-04 08:38:36] apptainer works
[2025-06-04 08:38:36] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:38:36] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:38:36] Starting ATLAS job with PandaID=6678725733
[2025-06-04 08:38:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:43:19]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:43:19]  guid=06df6bd7-972c-4885-9260-96656375e9bf
[2025-06-04 09:43:19]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 09:43:19]  is_altstaged=None
[2025-06-04 09:43:19]  is_tar=False
[2025-06-04 09:43:19]  lfn=log.45006595._055521.job.log.tgz.1
[2025-06-04 09:43:19]  mtime=0
[2025-06-04 09:43:19]  protocol_id=None
[2025-06-04 09:43:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:43:19]  replicas=None
[2025-06-04 09:43:19]  scope=mc23_13p6TeV
[2025-06-04 09:43:19]  status=None
[2025-06-04 09:43:19]  status_code=0
[2025-06-04 09:43:19]  storage_token=
[2025-06-04 09:43:19]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6678725733/log.45006595._055521.job.log.tgz.1
[2025-06-04 09:43:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/c6/log.45006595._055521.job.log.tgz.1
[2025-06-04 09:43:19]  workdir=None
[2025-06-04 09:43:19] ]
[2025-06-04 09:43:19] 2025-06-04 13:42:52,615 | INFO     | transferring file log.45006595._055521.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6678725733/log.45006595._055521.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:43:19] 2025-06-04 13:42:52,615 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6678725733/log.45006595._055521.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._055521.job
[2025-06-04 09:43:19] 2025-06-04 13:42:52,635 | INFO     | adding to output.list: log.45006595._055521.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/c6/log.45006595._055521.job.log.tg
[2025-06-04 09:43:19] 2025-06-04 13:42:52,636 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:43:19] 2025-06-04 13:42:52,636 | INFO     | summary of transferred files:
[2025-06-04 09:43:19] 2025-06-04 13:42:52,636 | INFO     |  -- lfn=log.45006595._055521.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:43:19] 2025-06-04 13:42:52,636 | INFO     | stage-out finished correctly
[2025-06-04 09:43:19] 2025-06-04 13:42:54,168 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:43:19] 2025-06-04 13:42:54,245 | INFO     | job 6678725733 has state=finished
[2025-06-04 09:43:19] 2025-06-04 13:42:54,245 | INFO     | preparing for final server update for job 6678725733 in state='finished'
[2025-06-04 09:43:19] 2025-06-04 13:42:54,246 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:43:19] 2025-06-04 13:42:54,246 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:43:19] 2025-06-04 13:42:54,246 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:43:19] 2025-06-04 13:42:54,246 | INFO     | job 6678725733 has finished - writing final server update
[2025-06-04 09:43:19] 2025-06-04 13:42:54,247 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:43:19] 2025-06-04 13:42:54,265 | INFO     | executing command: lscpu
[2025-06-04 09:43:19] 2025-06-04 13:42:54,338 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:43:19] 2025-06-04 13:42:55,470 | WARNING  | process 2263743 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 09:43:19] 2025-06-04 13:42:55,471 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678725733/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:43:19] 2025-06-04 13:42:55,818 | INFO     | number of running child processes to parent process 2263743: 1
[2025-06-04 09:43:19] 2025-06-04 13:42:55,818 | INFO     | maximum number of monitored processes: 6
[2025-06-04 09:43:19] 2025-06-04 13:42:58,043 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 09:43:19] 2025-06-04 13:42:58,044 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678725733/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:43:19] 2025-06-04 13:42:58,045 | INFO     | extracted standard info from prmon json
[2025-06-04 09:43:19] 2025-06-04 13:42:58,045 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:43:19] 2025-06-04 13:42:58,045 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:43:19] 2025-06-04 13:42:58,045 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:43:19] 2025-06-04 13:42:58,045 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:43:19] 2025-06-04 13:42:58,047 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:43:19] 2025-06-04 13:42:58,047 | INFO     | sum of square deviations: 54438230.0
[2025-06-04 09:43:19] 2025-06-04 13:42:58,047 | INFO     | sum of deviations: 3865188353.5
[2025-06-04 09:43:19] 2025-06-04 13:42:58,047 | INFO     | mean x: 1749042734.5
[2025-06-04 09:43:19] 2025-06-04 13:42:58,047 | INFO     | mean y: 2208801.625
[2025-06-04 09:43:19] 2025-06-04 13:42:58,047 | INFO     | -- intersect: -124182203644.61346
[2025-06-04 09:43:19] 2025-06-04 13:42:58,047 | INFO     | intersect: -124182203644.61346
[2025-06-04 09:43:19] 2025-06-04 13:42:58,047 | INFO     | chi2: 0.8031894648751066
[2025-06-04 09:43:19] 2025-06-04 13:42:58,047 | INFO     | -- intersect: -124182203644.61346
[2025-06-04 09:43:19] 2025-06-04 13:42:58,048 | INFO     | current memory leak: 71.00 B/s (using 56 data points, chi2=0.80)
[2025-06-04 09:43:19] 2025-06-04 13:42:58,048 | INFO     | ..............................
[2025-06-04 09:43:19] 2025-06-04 13:42:58,048 | INFO     | . Timing measurements:
[2025-06-04 09:43:19] 2025-06-04 13:42:58,048 | INFO     | . get job = 0 s
[2025-06-04 09:43:19] 2025-06-04 13:42:58,048 | INFO     | . initial setup = 2 s
[2025-06-04 09:43:19] 2025-06-04 13:42:58,048 | INFO     | . payload setup = 6 s
[2025-06-04 09:43:19] 2025-06-04 13:42:58,048 | INFO     | . stage-in = 0 s
[2025-06-04 09:43:19] 2025-06-04 13:42:58,048 | INFO     | . payload execution = 3821 s
[2025-06-04 09:43:19] 2025-06-04 13:42:58,048 | INFO     | . stage-out = 0 s
[2025-06-04 09:43:19] 2025-06-04 13:42:58,048 | INFO     | . log creation = 0 s
[2025-06-04 09:43:19] 2025-06-04 13:42:58,048 | INFO     | ..............................
[2025-06-04 09:43:19] 2025-06-04 13:42:58,484 | INFO     | 
[2025-06-04 09:43:19] 2025-06-04 13:42:58,484 | INFO     | job summary report
[2025-06-04 09:43:19] 2025-06-04 13:42:58,484 | INFO     | --------------------------------------------------
[2025-06-04 09:43:19] 2025-06-04 13:42:58,484 | INFO     | PanDA job id: 6678725733
[2025-06-04 09:43:19] 2025-06-04 13:42:58,485 | INFO     | task id: 45006595
[2025-06-04 09:43:19] 2025-06-04 13:42:58,485 | INFO     | errors: (none)
[2025-06-04 09:43:19] 2025-06-04 13:42:58,485 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:43:19] 2025-06-04 13:42:58,485 | INFO     | pilot state: finished 
[2025-06-04 09:43:19] 2025-06-04 13:42:58,485 | INFO     | transexitcode: 0
[2025-06-04 09:43:19] 2025-06-04 13:42:58,485 | INFO     | exeerrorcode: 0
[2025-06-04 09:43:19] 2025-06-04 13:42:58,485 | INFO     | exeerrordiag: 
[2025-06-04 09:43:19] 2025-06-04 13:42:58,485 | INFO     | exitcode: 0
[2025-06-04 09:43:19] 2025-06-04 13:42:58,485 | INFO     | exitmsg: OK
[2025-06-04 09:43:19] 2025-06-04 13:42:58,485 | INFO     | cpuconsumptiontime: 25623 s
[2025-06-04 09:43:19] 2025-06-04 13:42:58,485 | INFO     | nevents: 400
[2025-06-04 09:43:19] 2025-06-04 13:42:58,485 | INFO     | neventsw: 0
[2025-06-04 09:43:19] 2025-06-04 13:42:58,485 | INFO     | pid: 2263743
[2025-06-04 09:43:19] 2025-06-04 13:42:58,485 | INFO     | pgrp: 2263743
[2025-06-04 09:43:19] 2025-06-04 13:42:58,485 | INFO     | corecount: 8
[2025-06-04 09:43:19] 2025-06-04 13:42:58,485 | INFO     | event service: False
[2025-06-04 09:43:19] 2025-06-04 13:42:58,485 | INFO     | sizes: {0: 2397119, 1: 2397318, 4: 2397524, 11: 2397552, 3831: 2423291, 3832: 2432232, 3833: 2432416, 3837: 2432586}
[2025-06-04 09:43:19] 2025-06-04 13:42:58,485 | INFO     | --------------------------------------------------
[2025-06-04 09:43:19] 2025-06-04 13:42:58,485 | INFO     | 
[2025-06-04 09:43:19] 2025-06-04 13:42:58,486 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 09:43:19] 2025-06-04 13:42:58,509 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:43:19] 2025-06-04 13:42:58,509 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:43:19] 2025-06-04 13:42:58,509 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:43:19] 2025-06-04 13:42:58,510 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:43:19] 2025-06-04 13:42:58,510 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:43:19] 2025-06-04 13:42:58,510 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:43:19] 2025-06-04 13:42:58,510 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:43:19] 2025-06-04 13:42:58,510 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:43:19] 2025-06-04 13:42:58,510 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:43:19] 2025-06-04 13:42:58,510 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:43:19] 2025-06-04 13:42:58,510 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:43:19] 2025-06-04 13:42:58,510 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:43:19] 2025-06-04 13:42:58,510 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:43:19] 2025-06-04 13:42:58,510 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:43:19] 2025-06-04 13:42:58,510 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:43:19] 2025-06-04 13:42:58,510 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:43:19] 2025-06-04 13:42:58,510 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:43:19] 2025-06-04 13:42:58,510 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:43:19] 2025-06-04 13:42:58,510 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:43:19] 2025-06-04 13:42:58,511 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:43:19] 2025-06-04 13:42:58,511 | INFO     | job 6678725733 has completed (purged errors)
[2025-06-04 09:43:19] 2025-06-04 13:42:58,511 | INFO     | overall cleanup function is called
[2025-06-04 09:43:19] 2025-06-04 13:42:59,514 | INFO     | --- collectZombieJob: --- 10, [2263743]
[2025-06-04 09:43:19] 2025-06-04 13:42:59,514 | INFO     | zombie collector waiting for pid 2263743
[2025-06-04 09:43:19] 2025-06-04 13:42:59,514 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:43:19] 2025-06-04 13:42:59,514 | INFO     | collected zombie processes
[2025-06-04 09:43:19] 2025-06-04 13:42:59,514 | INFO     | will attempt to kill all subprocesses of pid=2263743
[2025-06-04 09:43:19] 2025-06-04 13:42:59,870 | INFO     | process IDs to be killed: [2263743] (in reverse order)
[2025-06-04 09:43:19] 2025-06-04 13:42:59,988 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:43:19] 2025-06-04 13:42:59,988 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:43:19] 2025-06-04 13:43:00,002 | INFO     | did not find any defunct processes belonging to 2263743
[2025-06-04 09:43:19] 2025-06-04 13:43:00,017 | INFO     | did not find any defunct processes belonging to 2263743
[2025-06-04 09:43:19] 2025-06-04 13:43:00,018 | INFO     | ready for new job
[2025-06-04 09:43:19] 2025-06-04 13:43:00,018 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:43:19] 2025-06-04 13:43:00,019 | INFO     | **************************************
[2025-06-04 09:43:19] 2025-06-04 13:43:00,019 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:43:19] 2025-06-04 13:43:00,019 | INFO     | **************************************
[2025-06-04 09:43:19] 2025-06-04 13:43:00,019 | INFO     | 
[2025-06-04 09:43:19] 2025-06-04 13:43:00,037 | INFO     | architecture information:
[2025-06-04 09:43:19] 2025-06-04 13:43:00,037 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:43:19] 2025-06-04 13:43:00,053 | INFO     | cat /etc/os-release:
[2025-06-04 09:43:19] NAME="CentOS Linux"
[2025-06-04 09:43:19] VERSION="7 (Core)"
[2025-06-04 09:43:19] ID="centos"
[2025-06-04 09:43:19] ID_LIKE="rhel fedora"
[2025-06-04 09:43:19] VERSION_ID="7"
[2025-06-04 09:43:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:43:19] ANSI_COLOR="0;31"
[2025-06-04 09:43:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:43:19] HOME_URL="https://www.centos.org/"
[2025-06-04 09:43:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:43:19] 
[2025-06-04 09:43:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:43:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:43:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:43:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:43:19] 
[2025-06-04 09:43:19] 2025-06-04 13:43:00,053 | INFO     | **************************************
[2025-06-04 09:43:19] 2025-06-04 13:43:00,553 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 09:43:19] 2025-06-04 13:43:00,571 | INFO     | sufficient remaining disk space (128743112704 B)
[2025-06-04 09:43:19] 2025-06-04 13:43:00,571 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:43:19] 2025-06-04 13:43:00,571 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:43:19] 2025-06-04 13:43:00,571 | INFO     | update_server=False
[2025-06-04 09:43:19] 2025-06-04 13:43:00,571 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:43:19] 2025-06-04 13:43:00,572 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:43:19] 2025-06-04 13:43:00,717 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:43:19] 2025-06-04 13:43:00,822 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 09:43:19] 2025-06-04 13:43:00,823 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 09:43:19] 2025-06-04 13:43:00,823 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:43:19] 2025-06-04 13:43:00,823 | INFO     | will abort loop
[2025-06-04 09:43:19] 2025-06-04 13:43:01,095 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:43:19] 2025-06-04 13:43:01,095 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:43:19] 2025-06-04 13:43:01,095 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:43:19] 2025-06-04 13:43:01,190 | INFO     | all data control threads have been joined
[2025-06-04 09:43:19] 2025-06-04 13:43:01,414 | INFO     | all payload control threads have been joined
[2025-06-04 09:43:19] 2025-06-04 13:43:01,573 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:43:19] 2025-06-04 13:43:01,828 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:43:19] 2025-06-04 13:43:01,881 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:43:19] 2025-06-04 13:43:01,882 | INFO     | all job control threads have been joined
[2025-06-04 09:43:19] 2025-06-04 13:43:01,988 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:43:19] 2025-06-04 13:43:02,073 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:43:19] 2025-06-04 13:43:02,195 | INFO     | [data] control thread has finished
[2025-06-04 09:43:19] 2025-06-04 13:43:02,394 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:43:19] 2025-06-04 13:43:02,420 | INFO     | [payload] control thread has finished
[2025-06-04 09:43:19] 2025-06-04 13:43:02,507 | INFO     | [job] validate thread has finished
[2025-06-04 09:43:19] 2025-06-04 13:43:02,668 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:43:19] 2025-06-04 13:43:02,722 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:43:19] 2025-06-04 13:43:02,812 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:43:19] 2025-06-04 13:43:02,887 | INFO     | [job] control thread has finished
[2025-06-04 09:43:19] 2025-06-04 13:43:03,126 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:43:19] 2025-06-04 13:43:04,131 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:43:19] 2025-06-04 13:43:04,578 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:43:19] 2025-06-04 13:43:10,729 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:43:19] 2025-06-04 13:43:11,734 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:43:19] 2025-06-04 13:43:13,719 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140574946604864)>', '<ExcThread(monitor, started 140574447351552)>']
[2025-06-04 09:43:19] 2025-06-04 13:43:14,143 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:43:19] 2025-06-04 13:43:14,143 | INFO     | [monitor] control thread has ended
[2025-06-04 09:43:19] 2025-06-04 13:43:18,738 | INFO     | all workflow threads have been joined
[2025-06-04 09:43:19] 2025-06-04 13:43:18,738 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:43:19] 2025-06-04 13:43:18,739 | INFO     | traces error code: 0
[2025-06-04 09:43:19] 2025-06-04 13:43:18,739 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:43:19] 2025-06-04 13:43:18,852 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:43:19] 2025-06-04 13:43:18,855 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:43:19] 2025-06-04 13:43:18,859 [wrapper] pilotpid: 2257246
[2025-06-04 09:43:19] 2025-06-04 13:43:18,862 [wrapper] Pilot exit status: 0
[2025-06-04 09:43:19] 2025-06-04 13:43:18,874 [wrapper] pandaids: 6678725733
[2025-06-04 09:43:19] 2025-06-04 13:43:18,962 [wrapper] cleanup supervisor_pilot 2492087 2257247
[2025-06-04 09:43:19] 2025-06-04 13:43:18,965 [wrapper] Test setup, not cleaning
[2025-06-04 09:43:19] 2025-06-04 13:43:18,969 [wrapper] apfmon messages muted
[2025-06-04 09:43:19] 2025-06-04 13:43:18,972 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:43:19] 2025-06-04 13:43:18,974 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:43:19]  *** Error codes and diagnostics ***
[2025-06-04 09:43:19]     "exeErrorCode": 0,
[2025-06-04 09:43:19]     "exeErrorDiag": "",
[2025-06-04 09:43:19]     "pilotErrorCode": 0,
[2025-06-04 09:43:19]     "pilotErrorDiag": "",
[2025-06-04 09:43:19]  *** Listing of results directory ***
[2025-06-04 09:43:19] total 384664
[2025-06-04 09:43:19] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 09:43:19] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 03:51 queuedata.json
[2025-06-04 09:43:19] -rwx------. 1 boincer umatlas     37140 Jun  4 03:53 runpilot2-wrapper.sh
[2025-06-04 09:43:19] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:43:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:38 run_atlas
[2025-06-04 09:43:19] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:38 job.xml
[2025-06-04 09:43:19] -rw-r--r--. 2 boincer umatlas 212119937 Jun  4 08:38 EVNT.45006593._000939.pool.root.1
[2025-06-04 09:43:19] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:38 start_atlas.sh
[2025-06-04 09:43:19] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:38 shared
[2025-06-04 09:43:19] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 08:38 input.tar.gz
[2025-06-04 09:43:19] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:38 boinc_lockfile
[2025-06-04 09:43:19] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 08:38 pandaJob.out
[2025-06-04 09:43:19] -rw-------. 1 boincer umatlas    986811 Jun  4 08:38 agis_schedconf.cvmfs.json
[2025-06-04 09:43:19] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:38 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:43:19] drwx------. 4 boincer umatlas      4096 Jun  4 08:38 pilot3
[2025-06-04 09:43:19] -rw-r--r--. 1 boincer umatlas      6935 Jun  4 09:38 init_data.xml
[2025-06-04 09:43:19] -rw-------. 1 boincer umatlas        95 Jun  4 09:42 pilot_heartbeat.json
[2025-06-04 09:43:19] -rw-------. 1 boincer umatlas 176586382 Jun  4 09:42 HITS.45006595._055521.pool.root.1
[2025-06-04 09:43:19] -rw-r--r--. 1 boincer umatlas       529 Jun  4 09:42 boinc_task_state.xml
[2025-06-04 09:43:19] -rw-------. 1 boincer umatlas      1030 Jun  4 09:42 memory_monitor_summary.json
[2025-06-04 09:43:19] -rw-------. 1 boincer umatlas    291934 Jun  4 09:42 log.45006595._055521.job.log.tgz.1
[2025-06-04 09:43:19] -rw-------. 1 boincer umatlas      7685 Jun  4 09:42 heartbeat.json
[2025-06-04 09:43:19] -rw-r--r--. 1 boincer umatlas        27 Jun  4 09:43 wrapper_checkpoint.txt
[2025-06-04 09:43:19] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:43 boinc_mmap_file
[2025-06-04 09:43:19] -rw-------. 1 boincer umatlas      4612 Jun  4 09:43 pilotlog.txt
[2025-06-04 09:43:19] -rw-------. 1 boincer umatlas    387000 Jun  4 09:43 log.45006595._055521.job.log.1
[2025-06-04 09:43:19] -rw-------. 1 boincer umatlas       357 Jun  4 09:43 output.list
[2025-06-04 09:43:19] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:43 runtime_log
[2025-06-04 09:43:19] -rw-------. 1 boincer umatlas    696320 Jun  4 09:43 result.tar.gz
[2025-06-04 09:43:19] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 09:43 runtime_log.err
[2025-06-04 09:43:19] -rw-------. 1 boincer umatlas       650 Jun  4 09:43 pQpNDm76xg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6knKDmldeBCo.diag
[2025-06-04 09:43:19] -rw-r--r--. 1 boincer umatlas     21262 Jun  4 09:43 stderr.txt
[2025-06-04 09:43:19] HITS file was successfully produced:
[2025-06-04 09:43:19] -rw-------. 1 boincer umatlas 176586382 Jun  4 09:42 shared/HITS.pool.root.1
[2025-06-04 09:43:19]  *** Contents of shared directory: ***
[2025-06-04 09:43:19] total 380804
[2025-06-04 09:43:19] -rw-r--r--. 2 boincer umatlas 212119937 Jun  4 08:38 ATLAS.root_0
[2025-06-04 09:43:19] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:38 start_atlas.sh
[2025-06-04 09:43:19] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 08:38 input.tar.gz
[2025-06-04 09:43:19] -rw-------. 1 boincer umatlas 176586382 Jun  4 09:42 HITS.pool.root.1
[2025-06-04 09:43:19] -rw-------. 1 boincer umatlas    696320 Jun  4 09:43 result.tar.gz
09:43:20 (2253170): run_atlas exited; CPU time 25720.956575
09:43:20 (2253170): called boinc_finish(0)

</stderr_txt>
]]>

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