Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:52:38 (2510345): wrapper (7.7.26015): starting
18:52:38 (2510345): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 18:52:38] Arguments: --nthreads 4
[2025-06-06 18:52:38] Threads: 4
[2025-06-06 18:52:38] Checking for CVMFS
[2025-06-06 18:52:38] No cvmfs_config command found, will try listing directly
[2025-06-06 18:52:38] CVMFS is ok
[2025-06-06 18:52:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 18:52:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 18:52:38] Further information can be found at the LHC@home message board.
[2025-06-06 18:52:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 18:52:38] Checking for apptainer binary...
[2025-06-06 18:52:38] which: no apptainer in ((null))
[2025-06-06 18:52:38] apptainer is not installed, using version from CVMFS
[2025-06-06 18:52:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 18:52:38] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2025-06-06 18:52:38] apptainer works
[2025-06-06 18:52:38] Set ATHENA_PROC_NUMBER=4
[2025-06-06 18:52:38] Set ATHENA_CORE_NUMBER=4
[2025-06-06 18:52:38] Starting ATLAS job with PandaID=6678866541
[2025-06-06 18:52:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 20:46:03]  *** The last 200 lines of the pilot log: ***
[2025-06-06 20:46:03] 2025-06-06 18:45:40,440 | INFO     | executing command: lscpu
[2025-06-06 20:46:03] 2025-06-06 18:45:40,466 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 20:46:03] 2025-06-06 18:45:41,840 | WARNING  | process 2521235 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 20:46:03] 2025-06-06 18:45:41,841 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6678866541/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 20:46:03] 2025-06-06 18:45:41,981 | INFO     | number of running child processes to parent process 2521235: 1
[2025-06-06 20:46:03] 2025-06-06 18:45:41,981 | INFO     | maximum number of monitored processes: 6
[2025-06-06 20:46:03] 2025-06-06 18:45:44,323 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 20:46:03] 2025-06-06 18:45:44,323 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6678866541/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 20:46:03] 2025-06-06 18:45:44,323 | INFO     | extracted standard info from prmon json
[2025-06-06 20:46:03] 2025-06-06 18:45:44,324 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 20:46:03] 2025-06-06 18:45:44,324 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 20:46:03] 2025-06-06 18:45:44,324 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 20:46:03] 2025-06-06 18:45:44,324 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 20:46:03] 2025-06-06 18:45:44,325 | INFO     | fitting pss+swap vs Time
[2025-06-06 20:46:03] 2025-06-06 18:45:44,326 | INFO     | sum of square deviations: 424045160.0
[2025-06-06 20:46:03] 2025-06-06 18:45:44,326 | INFO     | sum of deviations: -14392065012.000002
[2025-06-06 20:46:03] 2025-06-06 18:45:44,326 | INFO     | mean x: 1749232140.0
[2025-06-06 20:46:03] 2025-06-06 18:45:44,326 | INFO     | mean y: 2427345.3513513515
[2025-06-06 20:46:03] 2025-06-06 18:45:44,326 | INFO     | -- intersect: 59371251835.55397
[2025-06-06 20:46:03] 2025-06-06 18:45:44,326 | INFO     | intersect: 59371251835.55397
[2025-06-06 20:46:03] 2025-06-06 18:45:44,326 | INFO     | chi2: 1.7021107728372704
[2025-06-06 20:46:03] 2025-06-06 18:45:44,327 | INFO     | sum of square deviations: 369281342.5
[2025-06-06 20:46:03] 2025-06-06 18:45:44,327 | INFO     | sum of deviations: -12961709440.0
[2025-06-06 20:46:03] 2025-06-06 18:45:44,327 | INFO     | mean x: 1749231987.5
[2025-06-06 20:46:03] 2025-06-06 18:45:44,327 | INFO     | mean y: 2431330.754716981
[2025-06-06 20:46:03] 2025-06-06 18:45:44,327 | INFO     | -- intersect: 61400162967.11193
[2025-06-06 20:46:03] 2025-06-06 18:45:44,327 | INFO     | intersect: 61400162967.11193
[2025-06-06 20:46:03] 2025-06-06 18:45:44,327 | INFO     | chi2: 1.698427059190746
[2025-06-06 20:46:03] 2025-06-06 18:45:44,328 | INFO     | current chi2=1.698427059190746 (change=0.2164203238302753 %)
[2025-06-06 20:46:03] 2025-06-06 18:45:44,328 | INFO     | right removable region: 105
[2025-06-06 20:46:03] 2025-06-06 18:45:44,328 | INFO     | sum of square deviations: 369281342.5
[2025-06-06 20:46:03] 2025-06-06 18:45:44,328 | INFO     | sum of deviations: -28654132649.500004
[2025-06-06 20:46:03] 2025-06-06 18:45:44,328 | INFO     | mean x: 1749232292.5
[2025-06-06 20:46:03] 2025-06-06 18:45:44,328 | INFO     | mean y: 2466033.8584905663
[2025-06-06 20:46:03] 2025-06-06 18:45:44,328 | INFO     | -- intersect: 135732946769.1098
[2025-06-06 20:46:03] 2025-06-06 18:45:44,328 | INFO     | intersect: 135732946769.1098
[2025-06-06 20:46:03] 2025-06-06 18:45:44,328 | INFO     | chi2: 0.22136272810983904
[2025-06-06 20:46:03] 2025-06-06 18:45:44,329 | INFO     | current chi2=0.22136272810983904 (change=86.99481069960878 %)
[2025-06-06 20:46:03] 2025-06-06 18:45:44,329 | INFO     | sum of square deviations: 319447850.0
[2025-06-06 20:46:03] 2025-06-06 18:45:44,329 | INFO     | sum of deviations: -25185122520.999996
[2025-06-06 20:46:03] 2025-06-06 18:45:44,329 | INFO     | mean x: 1749232445.0
[2025-06-06 20:46:03] 2025-06-06 18:45:44,329 | INFO     | mean y: 2455349.5445544557
[2025-06-06 20:46:03] 2025-06-06 18:45:44,329 | INFO     | -- intersect: 137911141994.4332
[2025-06-06 20:46:03] 2025-06-06 18:45:44,329 | INFO     | intersect: 137911141994.4332
[2025-06-06 20:46:03] 2025-06-06 18:45:44,329 | INFO     | chi2: 0.21843879817240108
[2025-06-06 20:46:03] 2025-06-06 18:45:44,329 | INFO     | current chi2=0.21843879817240108 (change=1.3208772598732672 %)
[2025-06-06 20:46:03] 2025-06-06 18:45:44,330 | INFO     | left removable region: 20
[2025-06-06 20:46:03] 2025-06-06 18:45:44,330 | INFO     | sum of square deviations: 190403570.0
[2025-06-06 20:46:03] 2025-06-06 18:45:44,330 | INFO     | sum of deviations: -15245891284.0
[2025-06-06 20:46:03] 2025-06-06 18:45:44,330 | INFO     | mean x: 1749232567.0
[2025-06-06 20:46:03] 2025-06-06 18:45:44,330 | INFO     | mean y: 2430522.8235294116
[2025-06-06 20:46:03] 2025-06-06 18:45:44,330 | INFO     | -- intersect: 140066030942.26022
[2025-06-06 20:46:03] 2025-06-06 18:45:44,330 | INFO     | intersect: 140066030942.26022
[2025-06-06 20:46:03] 2025-06-06 18:45:44,330 | INFO     | chi2: 0.19602143117422785
[2025-06-06 20:46:03] 2025-06-06 18:45:44,330 | INFO     | -- intersect: 140066030942.26022
[2025-06-06 20:46:03] 2025-06-06 18:45:44,331 | INFO     | current memory leak: -80.07 B/s (using 85 data points, chi2=0.20)
[2025-06-06 20:46:03] 2025-06-06 18:45:44,331 | INFO     | ..............................
[2025-06-06 20:46:03] 2025-06-06 18:45:44,331 | INFO     | . Timing measurements:
[2025-06-06 20:46:03] 2025-06-06 18:45:44,331 | INFO     | . get job = 0 s
[2025-06-06 20:46:03] 2025-06-06 18:45:44,331 | INFO     | . initial setup = 1 s
[2025-06-06 20:46:03] 2025-06-06 18:45:44,331 | INFO     | . payload setup = 4 s
[2025-06-06 20:46:03] 2025-06-06 18:45:44,331 | INFO     | . stage-in = 0 s
[2025-06-06 20:46:03] 2025-06-06 18:45:44,331 | INFO     | . payload execution = 6750 s
[2025-06-06 20:46:03] 2025-06-06 18:45:44,331 | INFO     | . stage-out = 0 s
[2025-06-06 20:46:03] 2025-06-06 18:45:44,331 | INFO     | . log creation = 0 s
[2025-06-06 20:46:03] 2025-06-06 18:45:44,331 | INFO     | ..............................
[2025-06-06 20:46:03] 2025-06-06 18:45:44,476 | INFO     | 
[2025-06-06 20:46:03] 2025-06-06 18:45:44,476 | INFO     | job summary report
[2025-06-06 20:46:03] 2025-06-06 18:45:44,476 | INFO     | --------------------------------------------------
[2025-06-06 20:46:03] 2025-06-06 18:45:44,476 | INFO     | PanDA job id: 6678866541
[2025-06-06 20:46:03] 2025-06-06 18:45:44,476 | INFO     | task id: 45006595
[2025-06-06 20:46:03] 2025-06-06 18:45:44,476 | INFO     | errors: (none)
[2025-06-06 20:46:03] 2025-06-06 18:45:44,476 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 20:46:03] 2025-06-06 18:45:44,477 | INFO     | pilot state: finished 
[2025-06-06 20:46:03] 2025-06-06 18:45:44,477 | INFO     | transexitcode: 0
[2025-06-06 20:46:03] 2025-06-06 18:45:44,477 | INFO     | exeerrorcode: 0
[2025-06-06 20:46:03] 2025-06-06 18:45:44,477 | INFO     | exeerrordiag: 
[2025-06-06 20:46:03] 2025-06-06 18:45:44,477 | INFO     | exitcode: 0
[2025-06-06 20:46:03] 2025-06-06 18:45:44,477 | INFO     | exitmsg: OK
[2025-06-06 20:46:03] 2025-06-06 18:45:44,477 | INFO     | cpuconsumptiontime: 25676 s
[2025-06-06 20:46:03] 2025-06-06 18:45:44,477 | INFO     | nevents: 400
[2025-06-06 20:46:03] 2025-06-06 18:45:44,477 | INFO     | neventsw: 0
[2025-06-06 20:46:03] 2025-06-06 18:45:44,477 | INFO     | pid: 2521235
[2025-06-06 20:46:03] 2025-06-06 18:45:44,477 | INFO     | pgrp: 2521235
[2025-06-06 20:46:03] 2025-06-06 18:45:44,477 | INFO     | corecount: 4
[2025-06-06 20:46:03] 2025-06-06 18:45:44,477 | INFO     | event service: False
[2025-06-06 20:46:03] 2025-06-06 18:45:44,477 | INFO     | sizes: {0: 2397244, 3: 2397450, 11: 2397478, 6758: 2424609, 6759: 2433572, 6761: 2433628, 6766: 2433926}
[2025-06-06 20:46:03] 2025-06-06 18:45:44,477 | INFO     | --------------------------------------------------
[2025-06-06 20:46:03] 2025-06-06 18:45:44,477 | INFO     | 
[2025-06-06 20:46:03] 2025-06-06 18:45:44,477 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2025-06-06 20:46:03] 2025-06-06 18:45:44,490 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 20:46:03] 2025-06-06 18:45:44,490 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 20:46:03] 2025-06-06 18:45:44,490 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 20:46:03] 2025-06-06 18:45:44,490 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 20:46:03] 2025-06-06 18:45:44,491 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 20:46:03] 2025-06-06 18:45:44,491 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 20:46:03] 2025-06-06 18:45:44,491 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 20:46:03] 2025-06-06 18:45:44,491 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 20:46:03] 2025-06-06 18:45:44,491 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 20:46:03] 2025-06-06 18:45:44,491 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 20:46:03] 2025-06-06 18:45:44,491 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 20:46:03] 2025-06-06 18:45:44,491 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 20:46:03] 2025-06-06 18:45:44,491 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 20:46:03] 2025-06-06 18:45:44,491 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 20:46:03] 2025-06-06 18:45:44,491 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 20:46:03] 2025-06-06 18:45:44,491 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 20:46:03] 2025-06-06 18:45:44,491 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 20:46:03] 2025-06-06 18:45:44,491 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 20:46:03] 2025-06-06 18:45:44,491 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 20:46:03] 2025-06-06 18:45:44,492 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 20:46:03] 2025-06-06 18:45:44,492 | INFO     | job 6678866541 has completed (purged errors)
[2025-06-06 20:46:03] 2025-06-06 18:45:44,492 | INFO     | overall cleanup function is called
[2025-06-06 20:46:03] 2025-06-06 18:45:45,498 | INFO     | --- collectZombieJob: --- 10, [2521235]
[2025-06-06 20:46:03] 2025-06-06 18:45:45,499 | INFO     | zombie collector waiting for pid 2521235
[2025-06-06 20:46:03] 2025-06-06 18:45:45,499 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 20:46:03] 2025-06-06 18:45:45,499 | INFO     | collected zombie processes
[2025-06-06 20:46:03] 2025-06-06 18:45:45,499 | INFO     | will attempt to kill all subprocesses of pid=2521235
[2025-06-06 20:46:03] 2025-06-06 18:45:45,641 | INFO     | process IDs to be killed: [2521235] (in reverse order)
[2025-06-06 20:46:03] 2025-06-06 18:45:45,683 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 20:46:03] 2025-06-06 18:45:45,684 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 20:46:03] 2025-06-06 18:45:45,687 | INFO     | did not find any defunct processes belonging to 2521235
[2025-06-06 20:46:03] 2025-06-06 18:45:45,690 | INFO     | did not find any defunct processes belonging to 2521235
[2025-06-06 20:46:03] 2025-06-06 18:45:45,690 | INFO     | ready for new job
[2025-06-06 20:46:03] 2025-06-06 18:45:45,690 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 20:46:03] 2025-06-06 18:45:45,691 | INFO     | **************************************
[2025-06-06 20:46:03] 2025-06-06 18:45:45,691 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 20:46:03] 2025-06-06 18:45:45,692 | INFO     | **************************************
[2025-06-06 20:46:03] 2025-06-06 18:45:45,692 | INFO     | 
[2025-06-06 20:46:03] 2025-06-06 18:45:45,693 | INFO     | architecture information:
[2025-06-06 20:46:03] 2025-06-06 18:45:45,693 | INFO     | executing command: cat /etc/os-release
[2025-06-06 20:46:03] 2025-06-06 18:45:45,701 | INFO     | cat /etc/os-release:
[2025-06-06 20:46:03] NAME="CentOS Linux"
[2025-06-06 20:46:03] VERSION="7 (Core)"
[2025-06-06 20:46:03] ID="centos"
[2025-06-06 20:46:03] ID_LIKE="rhel fedora"
[2025-06-06 20:46:03] VERSION_ID="7"
[2025-06-06 20:46:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 20:46:03] ANSI_COLOR="0;31"
[2025-06-06 20:46:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 20:46:03] HOME_URL="https://www.centos.org/"
[2025-06-06 20:46:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 20:46:03] 
[2025-06-06 20:46:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 20:46:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 20:46:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 20:46:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 20:46:03] 
[2025-06-06 20:46:03] 2025-06-06 18:45:45,701 | INFO     | **************************************
[2025-06-06 20:46:03] 2025-06-06 18:45:46,204 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2025-06-06 20:46:03] 2025-06-06 18:45:46,213 | INFO     | sufficient remaining disk space (1684174536704 B)
[2025-06-06 20:46:03] 2025-06-06 18:45:46,213 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 20:46:03] 2025-06-06 18:45:46,213 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 20:46:03] 2025-06-06 18:45:46,213 | INFO     | update_server=False
[2025-06-06 20:46:03] 2025-06-06 18:45:46,213 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 20:46:03] 2025-06-06 18:45:46,213 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 20:46:03] 2025-06-06 18:45:46,213 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 20:46:03] 2025-06-06 18:45:46,214 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 20:46:03] 2025-06-06 18:45:46,214 | INFO     | aborting loop
[2025-06-06 20:46:03] 2025-06-06 18:45:46,214 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 20:46:03] 2025-06-06 18:45:46,214 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 20:46:03] 2025-06-06 18:45:46,214 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 20:46:03] 2025-06-06 18:45:46,983 | INFO     | all payload control threads have been joined
[2025-06-06 20:46:03] 2025-06-06 18:45:47,075 | INFO     | all job control threads have been joined
[2025-06-06 20:46:03] 2025-06-06 18:45:47,158 | INFO     | all data control threads have been joined
[2025-06-06 20:46:03] 2025-06-06 18:45:47,218 | INFO     | [job] retrieve thread has finished
[2025-06-06 20:46:03] 2025-06-06 18:45:47,219 | INFO     | [job] queue monitor thread has finished
[2025-06-06 20:46:03] 2025-06-06 18:45:47,219 | INFO     | [job] job monitor thread has finished
[2025-06-06 20:46:03] 2025-06-06 18:45:47,261 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 20:46:03] 2025-06-06 18:45:47,267 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 20:46:03] 2025-06-06 18:45:47,522 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 20:46:03] 2025-06-06 18:45:47,934 | INFO     | [payload] failed_post thread has finished
[2025-06-06 20:46:03] 2025-06-06 18:45:47,989 | INFO     | [payload] control thread has finished
[2025-06-06 20:46:03] 2025-06-06 18:45:48,079 | INFO     | [job] control thread has finished
[2025-06-06 20:46:03] 2025-06-06 18:45:48,164 | INFO     | [data] control thread has finished
[2025-06-06 20:46:03] 2025-06-06 18:45:48,327 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 20:46:03] 2025-06-06 18:45:48,416 | INFO     | [job] validate thread has finished
[2025-06-06 20:46:03] 2025-06-06 18:45:48,416 | INFO     | [data] copytool_in thread has finished
[2025-06-06 20:46:03] 2025-06-06 18:45:48,470 | INFO     | [payload] validate_post thread has finished
[2025-06-06 20:46:03] 2025-06-06 18:45:49,266 | INFO     | [data] copytool_out thread has finished
[2025-06-06 20:46:03] 2025-06-06 18:45:49,646 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 20:46:03] 2025-06-06 18:45:53,652 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 20:46:03] 2025-06-06 18:45:56,603 | INFO     | job.realtimelogging is not enabled
[2025-06-06 20:46:03] 2025-06-06 18:45:57,608 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 20:46:03] 2025-06-06 18:45:58,509 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22738443171648)>', '<ExcThread(monitor, started 22738206951168)>']
[2025-06-06 20:46:03] 2025-06-06 18:45:59,275 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 20:46:03] 2025-06-06 18:45:59,275 | INFO     | [monitor] control thread has ended
[2025-06-06 20:46:03] 2025-06-06 18:46:03,534 | INFO     | all workflow threads have been joined
[2025-06-06 20:46:03] 2025-06-06 18:46:03,534 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 20:46:03] 2025-06-06 18:46:03,534 | INFO     | traces error code: 0
[2025-06-06 20:46:03] 2025-06-06 18:46:03,535 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 20:46:03] 2025-06-06 18:46:03,610 [wrapper] ==== pilot stdout END ====
[2025-06-06 20:46:03] 2025-06-06 18:46:03,611 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 20:46:03] 2025-06-06 18:46:03,613 [wrapper] pilotpid: 2514052
[2025-06-06 20:46:03] 2025-06-06 18:46:03,615 [wrapper] Pilot exit status: 0
[2025-06-06 20:46:03] 2025-06-06 18:46:03,622 [wrapper] pandaids: 6678866541
[2025-06-06 20:46:03] 2025-06-06 18:46:03,645 [wrapper] cleanup supervisor_pilot 2640773 2514053
[2025-06-06 20:46:03] 2025-06-06 18:46:03,647 [wrapper] Test setup, not cleaning
[2025-06-06 20:46:03] 2025-06-06 18:46:03,649 [wrapper] apfmon messages muted
[2025-06-06 20:46:03] 2025-06-06 18:46:03,651 [wrapper] ==== wrapper stdout END ====
[2025-06-06 20:46:03] 2025-06-06 18:46:03,652 [wrapper] ==== wrapper stderr END ====
[2025-06-06 20:46:03]  *** Error codes and diagnostics ***
[2025-06-06 20:46:03]     "exeErrorCode": 0,
[2025-06-06 20:46:03]     "exeErrorDiag": "",
[2025-06-06 20:46:03]     "pilotErrorCode": 0,
[2025-06-06 20:46:03]     "pilotErrorDiag": "",
[2025-06-06 20:46:03]  *** Listing of results directory ***
[2025-06-06 20:46:03] total 385036
[2025-06-06 20:46:03] -rw-r--r-- 1 boinc boinc    495897 Jun  4 10:17 pilot3.tar.gz
[2025-06-06 20:46:03] -rw-r--r-- 1 boinc boinc      5111 Jun  4 10:26 queuedata.json
[2025-06-06 20:46:03] -rwx------ 1 boinc boinc     37140 Jun  4 10:27 runpilot2-wrapper.sh
[2025-06-06 20:46:03] -rw-r--r-- 1 boinc boinc       100 Jun  6 18:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 20:46:03] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 18:52 run_atlas
[2025-06-06 20:46:03] -rw-r--r-- 1 boinc boinc       105 Jun  6 18:52 job.xml
[2025-06-06 20:46:03] -rw-r--r-- 2 boinc boinc 214199351 Jun  6 18:52 EVNT.45006593._000950.pool.root.1
[2025-06-06 20:46:03] -rw-r--r-- 1 boinc boinc      6421 Jun  6 18:52 init_data.xml
[2025-06-06 20:46:03] drwxrwx--x 2 boinc boinc      4096 Jun  6 18:52 shared
[2025-06-06 20:46:03] -rw-r--r-- 2 boinc boinc    508874 Jun  6 18:52 input.tar.gz
[2025-06-06 20:46:03] -rw-r--r-- 2 boinc boinc     15093 Jun  6 18:52 start_atlas.sh
[2025-06-06 20:46:03] -rw-r--r-- 1 boinc boinc         0 Jun  6 18:52 boinc_lockfile
[2025-06-06 20:46:03] -rw-r--r-- 1 boinc boinc      2520 Jun  6 18:52 pandaJob.out
[2025-06-06 20:46:03] -rw------- 1 boinc boinc    985748 Jun  6 18:52 agis_schedconf.cvmfs.json
[2025-06-06 20:46:03] -rw------- 1 boinc boinc   1598969 Jun  6 18:52 agis_ddmendpoints.agis.ALL.json
[2025-06-06 20:46:03] drwx------ 4 boinc boinc      4096 Jun  6 18:52 pilot3
[2025-06-06 20:46:03] -rw------- 1 boinc boinc        95 Jun  6 20:44 pilot_heartbeat.json
[2025-06-06 20:46:03] -rw------- 1 boinc boinc 174418089 Jun  6 20:45 HITS.45006595._055651.pool.root.1
[2025-06-06 20:46:03] -rw-r--r-- 1 boinc boinc       529 Jun  6 20:45 boinc_task_state.xml
[2025-06-06 20:46:03] -rw------- 1 boinc boinc      1028 Jun  6 20:45 memory_monitor_summary.json
[2025-06-06 20:46:03] -rw------- 1 boinc boinc    246740 Jun  6 20:45 log.45006595._055651.job.log.tgz.1
[2025-06-06 20:46:03] -rw------- 1 boinc boinc      7735 Jun  6 20:45 heartbeat.json
[2025-06-06 20:46:03] -rw-r--r-- 1 boinc boinc      8192 Jun  6 20:45 boinc_mmap_file
[2025-06-06 20:46:03] -rw-r--r-- 1 boinc boinc        27 Jun  6 20:45 wrapper_checkpoint.txt
[2025-06-06 20:46:03] -rw------- 1 boinc boinc      4559 Jun  6 20:46 pilotlog.txt
[2025-06-06 20:46:03] -rw------- 1 boinc boinc    665202 Jun  6 20:46 log.45006595._055651.job.log.1
[2025-06-06 20:46:03] -rw------- 1 boinc boinc       357 Jun  6 20:46 output.list
[2025-06-06 20:46:03] -rw-r--r-- 1 boinc boinc       620 Jun  6 20:46 runtime_log
[2025-06-06 20:46:03] -rw------- 1 boinc boinc    931840 Jun  6 20:46 result.tar.gz
[2025-06-06 20:46:03] -rw-r--r-- 1 boinc boinc      9025 Jun  6 20:46 runtime_log.err
[2025-06-06 20:46:03] -rw------- 1 boinc boinc       660 Jun  6 20:46 A3jKDmtdyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmamnKDmOjirDo.diag
[2025-06-06 20:46:03] -rw-r--r-- 1 boinc boinc     20921 Jun  6 20:46 stderr.txt
[2025-06-06 20:46:03] HITS file was successfully produced:
[2025-06-06 20:46:03] -rw------- 1 boinc boinc 174418089 Jun  6 20:45 shared/HITS.pool.root.1
[2025-06-06 20:46:03]  *** Contents of shared directory: ***
[2025-06-06 20:46:03] total 380948
[2025-06-06 20:46:03] -rw-r--r-- 2 boinc boinc 214199351 Jun  6 18:52 ATLAS.root_0
[2025-06-06 20:46:03] -rw-r--r-- 2 boinc boinc    508874 Jun  6 18:52 input.tar.gz
[2025-06-06 20:46:03] -rw-r--r-- 2 boinc boinc     15093 Jun  6 18:52 start_atlas.sh
[2025-06-06 20:46:03] -rw------- 1 boinc boinc 174418089 Jun  6 20:45 HITS.pool.root.1
[2025-06-06 20:46:03] -rw------- 1 boinc boinc    931840 Jun  6 20:46 result.tar.gz
20:46:04 (2510345): run_atlas exited; CPU time 25784.813813
20:46:04 (2510345): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN