Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:30:51 (83006): wrapper (7.7.26015): starting
08:30:51 (83006): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:30:51] Arguments: --nthreads 8
[2025-06-04 08:30:51] Threads: 8
[2025-06-04 08:30:51] Checking for CVMFS
[2025-06-04 08:30:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:30:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:30:51] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:30:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:30:51] 2.11.2.0 74184 12697 349944 146780 1 125 18336486 18432001 12698 130560 0 75434726 99.622 56683677 42704 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 08:30:51] CVMFS is ok
[2025-06-04 08:30:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:30:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:30:51] Further information can be found at the LHC@home message board.
[2025-06-04 08:30:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:30:51] Checking for apptainer binary...
[2025-06-04 08:30:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:30:51] Running /usr/bin/apptainer --version
[2025-06-04 08:30:51] apptainer version 1.3.2-1.el7
[2025-06-04 08:30:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:30:52] c-212-13.aglt2.org
[2025-06-04 08:30:52] apptainer works
[2025-06-04 08:30:52] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:30:52] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:30:52] Starting ATLAS job with PandaID=6678835798
[2025-06-04 08:30:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:30:24]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:30:24]  lfn=log.45006595._055636.job.log.tgz.1
[2025-06-04 09:30:24]  mtime=0
[2025-06-04 09:30:24]  protocol_id=None
[2025-06-04 09:30:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:30:24]  replicas=None
[2025-06-04 09:30:24]  scope=mc23_13p6TeV
[2025-06-04 09:30:24]  status=None
[2025-06-04 09:30:24]  status_code=0
[2025-06-04 09:30:24]  storage_token=
[2025-06-04 09:30:24]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6678835798/log.45006595._055636.job.log.tgz.1
[2025-06-04 09:30:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/11/4b/log.45006595._055636.job.log.tgz.1
[2025-06-04 09:30:24]  workdir=None
[2025-06-04 09:30:24] ]
[2025-06-04 09:30:24] 2025-06-04 13:30:02,359 | INFO     | transferring file log.45006595._055636.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6678835798/log.45006595._055636.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:30:24] 2025-06-04 13:30:02,359 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6678835798/log.45006595._055636.job.log.tgz.1 /tmp/boinchome/slots/4/log.45006595._055636.job
[2025-06-04 09:30:24] 2025-06-04 13:30:02,377 | INFO     | adding to output.list: log.45006595._055636.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/11/4b/log.45006595._055636.job.log.tg
[2025-06-04 09:30:24] 2025-06-04 13:30:02,378 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:30:24] 2025-06-04 13:30:02,378 | INFO     | summary of transferred files:
[2025-06-04 09:30:24] 2025-06-04 13:30:02,378 | INFO     |  -- lfn=log.45006595._055636.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:30:24] 2025-06-04 13:30:02,378 | INFO     | stage-out finished correctly
[2025-06-04 09:30:24] 2025-06-04 13:30:03,057 | INFO     | monitor loop #268: job 0:6678835798 is in state 'finished'
[2025-06-04 09:30:24] 2025-06-04 13:30:03,058 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:30:24] 2025-06-04 13:30:03,094 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:30:24] 2025-06-04 13:30:04,827 | INFO     | job 6678835798 has state=finished
[2025-06-04 09:30:24] 2025-06-04 13:30:04,828 | INFO     | preparing for final server update for job 6678835798 in state='finished'
[2025-06-04 09:30:24] 2025-06-04 13:30:04,828 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:30:24] 2025-06-04 13:30:04,828 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:30:24] 2025-06-04 13:30:04,828 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:30:24] 2025-06-04 13:30:04,828 | INFO     | job 6678835798 has finished - writing final server update
[2025-06-04 09:30:24] 2025-06-04 13:30:04,829 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:30:24] 2025-06-04 13:30:04,834 | INFO     | executing command: lscpu
[2025-06-04 09:30:24] 2025-06-04 13:30:04,992 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:30:24] 2025-06-04 13:30:05,561 | INFO     | monitor loop #269: job 0:6678835798 is in state 'finished'
[2025-06-04 09:30:24] 2025-06-04 13:30:05,562 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:30:24] 2025-06-04 13:30:08,064 | INFO     | monitor loop #270: job 0:6678835798 is in state 'finished'
[2025-06-04 09:30:24] 2025-06-04 13:30:08,064 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:30:24] 2025-06-04 13:30:10,570 | INFO     | monitor loop #271: job 0:6678835798 is in state 'finished'
[2025-06-04 09:30:24] 2025-06-04 13:30:10,570 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:30:24] 2025-06-04 13:30:12,035 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 09:30:24] 2025-06-04 13:30:12,036 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6678835798/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:30:24] 2025-06-04 13:30:12,037 | INFO     | extracted standard info from prmon json
[2025-06-04 09:30:24] 2025-06-04 13:30:12,037 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:30:24] 2025-06-04 13:30:12,037 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:30:24] 2025-06-04 13:30:12,038 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:30:24] 2025-06-04 13:30:12,038 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:30:24] 2025-06-04 13:30:12,039 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:30:24] 2025-06-04 13:30:12,039 | INFO     | sum of square deviations: 41117050.0
[2025-06-04 09:30:24] 2025-06-04 13:30:12,039 | INFO     | sum of deviations: -1915449837.0
[2025-06-04 09:30:24] 2025-06-04 13:30:12,039 | INFO     | mean x: 1749042116.0
[2025-06-04 09:30:24] 2025-06-04 13:30:12,039 | INFO     | mean y: 2560494.254901961
[2025-06-04 09:30:24] 2025-06-04 13:30:12,039 | INFO     | -- intersect: 81482200594.85393
[2025-06-04 09:30:24] 2025-06-04 13:30:12,039 | INFO     | intersect: 81482200594.85393
[2025-06-04 09:30:24] 2025-06-04 13:30:12,040 | INFO     | chi2: 0.0024705358415253306
[2025-06-04 09:30:24] 2025-06-04 13:30:12,040 | INFO     | -- intersect: 81482200594.85393
[2025-06-04 09:30:24] 2025-06-04 13:30:12,040 | INFO     | current memory leak: -46.59 B/s (using 51 data points, chi2=0.00)
[2025-06-04 09:30:24] 2025-06-04 13:30:12,040 | INFO     | ..............................
[2025-06-04 09:30:24] 2025-06-04 13:30:12,040 | INFO     | . Timing measurements:
[2025-06-04 09:30:24] 2025-06-04 13:30:12,040 | INFO     | . get job = 0 s
[2025-06-04 09:30:24] 2025-06-04 13:30:12,040 | INFO     | . initial setup = 2 s
[2025-06-04 09:30:24] 2025-06-04 13:30:12,040 | INFO     | . payload setup = 6 s
[2025-06-04 09:30:24] 2025-06-04 13:30:12,040 | INFO     | . stage-in = 0 s
[2025-06-04 09:30:24] 2025-06-04 13:30:12,040 | INFO     | . payload execution = 3516 s
[2025-06-04 09:30:24] 2025-06-04 13:30:12,040 | INFO     | . stage-out = 0 s
[2025-06-04 09:30:24] 2025-06-04 13:30:12,040 | INFO     | . log creation = 0 s
[2025-06-04 09:30:24] 2025-06-04 13:30:12,040 | INFO     | ..............................
[2025-06-04 09:30:24] 2025-06-04 13:30:12,108 | INFO     | 
[2025-06-04 09:30:24] 2025-06-04 13:30:12,108 | INFO     | job summary report
[2025-06-04 09:30:24] 2025-06-04 13:30:12,108 | INFO     | --------------------------------------------------
[2025-06-04 09:30:24] 2025-06-04 13:30:12,109 | INFO     | PanDA job id: 6678835798
[2025-06-04 09:30:24] 2025-06-04 13:30:12,109 | INFO     | task id: 45006595
[2025-06-04 09:30:24] 2025-06-04 13:30:12,109 | INFO     | errors: (none)
[2025-06-04 09:30:24] 2025-06-04 13:30:12,109 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:30:24] 2025-06-04 13:30:12,109 | INFO     | pilot state: finished 
[2025-06-04 09:30:24] 2025-06-04 13:30:12,109 | INFO     | transexitcode: 0
[2025-06-04 09:30:24] 2025-06-04 13:30:12,109 | INFO     | exeerrorcode: 0
[2025-06-04 09:30:24] 2025-06-04 13:30:12,109 | INFO     | exeerrordiag: 
[2025-06-04 09:30:24] 2025-06-04 13:30:12,109 | INFO     | exitcode: 0
[2025-06-04 09:30:24] 2025-06-04 13:30:12,109 | INFO     | exitmsg: OK
[2025-06-04 09:30:24] 2025-06-04 13:30:12,109 | INFO     | cpuconsumptiontime: 25449 s
[2025-06-04 09:30:24] 2025-06-04 13:30:12,109 | INFO     | nevents: 400
[2025-06-04 09:30:24] 2025-06-04 13:30:12,109 | INFO     | neventsw: 0
[2025-06-04 09:30:24] 2025-06-04 13:30:12,109 | INFO     | pid: 95158
[2025-06-04 09:30:24] 2025-06-04 13:30:12,110 | INFO     | pgrp: 95158
[2025-06-04 09:30:24] 2025-06-04 13:30:12,110 | INFO     | corecount: 8
[2025-06-04 09:30:24] 2025-06-04 13:30:12,110 | INFO     | event service: False
[2025-06-04 09:30:24] 2025-06-04 13:30:12,110 | INFO     | sizes: {0: 2397290, 4: 2397496, 11: 2397524, 3526: 2423238, 3528: 2432235, 3537: 2432349}
[2025-06-04 09:30:24] 2025-06-04 13:30:12,110 | INFO     | --------------------------------------------------
[2025-06-04 09:30:24] 2025-06-04 13:30:12,110 | INFO     | 
[2025-06-04 09:30:24] 2025-06-04 13:30:12,110 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-04 09:30:24] 2025-06-04 13:30:12,138 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:30:24] 2025-06-04 13:30:12,139 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:30:24] 2025-06-04 13:30:12,139 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:30:24] 2025-06-04 13:30:12,139 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:30:24] 2025-06-04 13:30:12,139 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:30:24] 2025-06-04 13:30:12,139 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:30:24] 2025-06-04 13:30:12,139 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:30:24] 2025-06-04 13:30:12,139 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:30:24] 2025-06-04 13:30:12,139 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:30:24] 2025-06-04 13:30:12,139 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:30:24] 2025-06-04 13:30:12,139 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:30:24] 2025-06-04 13:30:12,139 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:30:24] 2025-06-04 13:30:12,139 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:30:24] 2025-06-04 13:30:12,140 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:30:24] 2025-06-04 13:30:12,140 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:30:24] 2025-06-04 13:30:12,140 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:30:24] 2025-06-04 13:30:12,140 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:30:24] 2025-06-04 13:30:12,140 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:30:24] 2025-06-04 13:30:12,140 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:30:24] 2025-06-04 13:30:12,140 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:30:24] 2025-06-04 13:30:12,140 | INFO     | job 6678835798 has completed (purged errors)
[2025-06-04 09:30:24] 2025-06-04 13:30:12,140 | INFO     | overall cleanup function is called
[2025-06-04 09:30:24] 2025-06-04 13:30:13,148 | INFO     | --- collectZombieJob: --- 10, [95158]
[2025-06-04 09:30:24] 2025-06-04 13:30:13,150 | INFO     | zombie collector waiting for pid 95158
[2025-06-04 09:30:24] 2025-06-04 13:30:13,150 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:30:24] 2025-06-04 13:30:13,150 | INFO     | collected zombie processes
[2025-06-04 09:30:24] 2025-06-04 13:30:13,150 | INFO     | will attempt to kill all subprocesses of pid=95158
[2025-06-04 09:30:24] 2025-06-04 13:30:13,647 | INFO     | PID=86592 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 09:30:24] 2025-06-04 13:30:13,647 | INFO     | .. there are 18 such processes running
[2025-06-04 09:30:24] 2025-06-04 13:30:13,692 | INFO     | process IDs to be killed: [95158] (in reverse order)
[2025-06-04 09:30:24] 2025-06-04 13:30:13,785 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:30:24] 2025-06-04 13:30:13,785 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:30:24] 2025-06-04 13:30:13,795 | INFO     | did not find any defunct processes belonging to 95158
[2025-06-04 09:30:24] 2025-06-04 13:30:13,804 | INFO     | did not find any defunct processes belonging to 95158
[2025-06-04 09:30:24] 2025-06-04 13:30:13,804 | INFO     | ready for new job
[2025-06-04 09:30:24] 2025-06-04 13:30:13,804 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:30:24] 2025-06-04 13:30:13,805 | INFO     | **************************************
[2025-06-04 09:30:24] 2025-06-04 13:30:13,806 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:30:24] 2025-06-04 13:30:13,806 | INFO     | **************************************
[2025-06-04 09:30:24] 2025-06-04 13:30:13,806 | INFO     | 
[2025-06-04 09:30:24] 2025-06-04 13:30:13,811 | INFO     | architecture information:
[2025-06-04 09:30:24] 2025-06-04 13:30:13,811 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:30:24] 2025-06-04 13:30:13,827 | INFO     | cat /etc/os-release:
[2025-06-04 09:30:24] NAME="CentOS Linux"
[2025-06-04 09:30:24] VERSION="7 (Core)"
[2025-06-04 09:30:24] ID="centos"
[2025-06-04 09:30:24] ID_LIKE="rhel fedora"
[2025-06-04 09:30:24] VERSION_ID="7"
[2025-06-04 09:30:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:30:24] ANSI_COLOR="0;31"
[2025-06-04 09:30:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:30:24] HOME_URL="https://www.centos.org/"
[2025-06-04 09:30:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:30:24] 
[2025-06-04 09:30:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:30:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:30:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:30:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:30:24] 
[2025-06-04 09:30:24] 2025-06-04 13:30:13,828 | INFO     | **************************************
[2025-06-04 09:30:24] 2025-06-04 13:30:14,331 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-04 09:30:24] 2025-06-04 13:30:14,350 | INFO     | sufficient remaining disk space (104056487936 B)
[2025-06-04 09:30:24] 2025-06-04 13:30:14,351 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:30:24] 2025-06-04 13:30:14,351 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:30:24] 2025-06-04 13:30:14,351 | INFO     | update_server=False
[2025-06-04 09:30:24] 2025-06-04 13:30:14,351 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:30:24] 2025-06-04 13:30:14,351 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:30:24] 2025-06-04 13:30:14,351 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:30:24] 2025-06-04 13:30:14,351 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:30:24] 2025-06-04 13:30:14,352 | INFO     | aborting loop
[2025-06-04 09:30:24] 2025-06-04 13:30:14,352 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:30:24] 2025-06-04 13:30:14,352 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:30:24] 2025-06-04 13:30:14,352 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:30:24] 2025-06-04 13:30:14,511 | INFO     | all job control threads have been joined
[2025-06-04 09:30:24] 2025-06-04 13:30:14,602 | INFO     | all data control threads have been joined
[2025-06-04 09:30:24] 2025-06-04 13:30:14,908 | INFO     | all payload control threads have been joined
[2025-06-04 09:30:24] 2025-06-04 13:30:15,357 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:30:24] 2025-06-04 13:30:15,358 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:30:24] 2025-06-04 13:30:15,458 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:30:24] 2025-06-04 13:30:15,516 | INFO     | [job] control thread has finished
[2025-06-04 09:30:24] 2025-06-04 13:30:15,550 | INFO     | [job] validate thread has finished
[2025-06-04 09:30:24] 2025-06-04 13:30:15,551 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:30:24] 2025-06-04 13:30:15,592 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:30:24] 2025-06-04 13:30:15,608 | INFO     | [data] control thread has finished
[2025-06-04 09:30:24] 2025-06-04 13:30:15,612 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:30:24] 2025-06-04 13:30:15,739 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:30:24] 2025-06-04 13:30:15,914 | INFO     | [payload] control thread has finished
[2025-06-04 09:30:24] 2025-06-04 13:30:16,551 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:30:24] 2025-06-04 13:30:16,786 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:30:24] 2025-06-04 13:30:16,791 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:30:24] 2025-06-04 13:30:17,121 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:30:24] 2025-06-04 13:30:17,558 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:30:24] 2025-06-04 13:30:18,127 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:30:24] 2025-06-04 13:30:18,359 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:30:24] 2025-06-04 13:30:19,066 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140203266049856)>', '<ExcThread(monitor, started 140202689423104)>']
[2025-06-04 09:30:24] 2025-06-04 13:30:19,380 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:30:24] 2025-06-04 13:30:19,380 | INFO     | [monitor] control thread has ended
[2025-06-04 09:30:24] 2025-06-04 13:30:24,092 | INFO     | all workflow threads have been joined
[2025-06-04 09:30:24] 2025-06-04 13:30:24,092 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:30:24] 2025-06-04 13:30:24,093 | INFO     | traces error code: 0
[2025-06-04 09:30:24] 2025-06-04 13:30:24,093 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:30:24] 2025-06-04 13:30:24,229 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:30:24] 2025-06-04 13:30:24,232 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:30:24] 2025-06-04 13:30:24,234 [wrapper] pilotpid: 86592
[2025-06-04 09:30:24] 2025-06-04 13:30:24,239 [wrapper] Pilot exit status: 0
[2025-06-04 09:30:24] 2025-06-04 13:30:24,253 [wrapper] pandaids: 6678835798
[2025-06-04 09:30:24] 2025-06-04 13:30:24,322 [wrapper] cleanup supervisor_pilot 93637 86593
[2025-06-04 09:30:24] 2025-06-04 13:30:24,347 [wrapper] Test setup, not cleaning
[2025-06-04 09:30:24] 2025-06-04 13:30:24,350 [wrapper] apfmon messages muted
[2025-06-04 09:30:24] 2025-06-04 13:30:24,359 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:30:24] 2025-06-04 13:30:24,378 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:30:24]  *** Error codes and diagnostics ***
[2025-06-04 09:30:24]     "exeErrorCode": 0,
[2025-06-04 09:30:24]     "exeErrorDiag": "",
[2025-06-04 09:30:24]     "pilotErrorCode": 0,
[2025-06-04 09:30:24]     "pilotErrorDiag": "",
[2025-06-04 09:30:24]  *** Listing of results directory ***
[2025-06-04 09:30:24] total 390364
[2025-06-04 09:30:24] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 04:17 pilot3.tar.gz
[2025-06-04 09:30:24] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 04:26 queuedata.json
[2025-06-04 09:30:24] -rwx------ 1 boincer umatlas     37140 Jun  4 04:27 runpilot2-wrapper.sh
[2025-06-04 09:30:24] -rw-r--r-- 1 boincer umatlas       100 Jun  4 08:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:30:24] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 08:30 run_atlas
[2025-06-04 09:30:24] -rw-r--r-- 1 boincer umatlas       105 Jun  4 08:30 job.xml
[2025-06-04 09:30:24] -rw-r--r-- 2 boincer umatlas 216091767 Jun  4 08:30 EVNT.45006593._000915.pool.root.1
[2025-06-04 09:30:24] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:30 start_atlas.sh
[2025-06-04 09:30:24] drwxrwx--x 2 boincer umatlas      4096 Jun  4 08:30 shared
[2025-06-04 09:30:24] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 08:30 input.tar.gz
[2025-06-04 09:30:24] -rw-r--r-- 1 boincer umatlas         0 Jun  4 08:30 boinc_lockfile
[2025-06-04 09:30:24] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 08:30 pandaJob.out
[2025-06-04 09:30:24] -rw------- 1 boincer umatlas    986811 Jun  4 08:30 agis_schedconf.cvmfs.json
[2025-06-04 09:30:24] -rw------- 1 boincer umatlas   1598969 Jun  4 08:30 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:30:24] drwx------ 4 boincer umatlas      4096 Jun  4 08:31 pilot3
[2025-06-04 09:30:24] -rw-r--r-- 1 boincer umatlas      6388 Jun  4 09:19 init_data.xml
[2025-06-04 09:30:24] -rw------- 1 boincer umatlas 178501865 Jun  4 09:29 HITS.45006595._055636.pool.root.1
[2025-06-04 09:30:24] -rw-r--r-- 1 boincer umatlas       529 Jun  4 09:29 boinc_task_state.xml
[2025-06-04 09:30:24] -rw------- 1 boincer umatlas        95 Jun  4 09:29 pilot_heartbeat.json
[2025-06-04 09:30:24] -rw------- 1 boincer umatlas      1071 Jun  4 09:29 memory_monitor_summary.json
[2025-06-04 09:30:24] -rw------- 1 boincer umatlas    294384 Jun  4 09:30 log.45006595._055636.job.log.tgz.1
[2025-06-04 09:30:24] -rw------- 1 boincer umatlas      7741 Jun  4 09:30 heartbeat.json
[2025-06-04 09:30:24] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 09:30 boinc_mmap_file
[2025-06-04 09:30:24] -rw-r--r-- 1 boincer umatlas        27 Jun  4 09:30 wrapper_checkpoint.txt
[2025-06-04 09:30:24] -rw------- 1 boincer umatlas      4477 Jun  4 09:30 pilotlog.txt
[2025-06-04 09:30:24] -rw------- 1 boincer umatlas    361594 Jun  4 09:30 log.45006595._055636.job.log.1
[2025-06-04 09:30:24] -rw------- 1 boincer umatlas       357 Jun  4 09:30 output.list
[2025-06-04 09:30:24] -rw-r--r-- 1 boincer umatlas       620 Jun  4 09:30 runtime_log
[2025-06-04 09:30:24] -rw------- 1 boincer umatlas    675840 Jun  4 09:30 result.tar.gz
[2025-06-04 09:30:24] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 09:30 runtime_log.err
[2025-06-04 09:30:24] -rw------- 1 boincer umatlas       658 Jun  4 09:30 bJgKDmtdyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXmnKDmq3snTm.diag
[2025-06-04 09:30:24] -rw-r--r-- 1 boincer umatlas     21648 Jun  4 09:30 stderr.txt
[2025-06-04 09:30:24] HITS file was successfully produced:
[2025-06-04 09:30:24] -rw------- 1 boincer umatlas 178501865 Jun  4 09:29 shared/HITS.pool.root.1
[2025-06-04 09:30:24]  *** Contents of shared directory: ***
[2025-06-04 09:30:24] total 386528
[2025-06-04 09:30:24] -rw-r--r-- 2 boincer umatlas 216091767 Jun  4 08:30 ATLAS.root_0
[2025-06-04 09:30:24] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:30 start_atlas.sh
[2025-06-04 09:30:24] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 08:30 input.tar.gz
[2025-06-04 09:30:24] -rw------- 1 boincer umatlas 178501865 Jun  4 09:29 HITS.pool.root.1
[2025-06-04 09:30:24] -rw------- 1 boincer umatlas    675840 Jun  4 09:30 result.tar.gz
09:30:25 (83006): run_atlas exited; CPU time 25330.482679
09:30:25 (83006): called boinc_finish(0)

</stderr_txt>
]]>

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