Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:30:12 (878798): wrapper (7.7.26015): starting
08:30:12 (878798): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 08:30:12] Arguments: --nthreads 4
[2025-06-06 08:30:12] Threads: 4
[2025-06-06 08:30:12] Checking for CVMFS
[2025-06-06 08:30:12] No cvmfs_config command found, will try listing directly
[2025-06-06 08:30:12] CVMFS is ok
[2025-06-06 08:30:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 08:30:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 08:30:12] Further information can be found at the LHC@home message board.
[2025-06-06 08:30:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 08:30:12] Checking for apptainer binary...
[2025-06-06 08:30:12] which: no apptainer in ((null))
[2025-06-06 08:30:12] apptainer is not installed, using version from CVMFS
[2025-06-06 08:30:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 08:30:12] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-06-06 08:30:12] apptainer works
[2025-06-06 08:30:12] Set ATHENA_PROC_NUMBER=4
[2025-06-06 08:30:12] Set ATHENA_CORE_NUMBER=4
[2025-06-06 08:30:12] Starting ATLAS job with PandaID=6678313725
[2025-06-06 08:30:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 11:02:43]  *** The last 200 lines of the pilot log: ***
[2025-06-06 11:02:43] 2025-06-06 08:58:52,193 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6678313725/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 11:02:43] 2025-06-06 08:58:52,194 | INFO     | extracted standard info from prmon json
[2025-06-06 11:02:43] 2025-06-06 08:58:52,194 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 11:02:43] 2025-06-06 08:58:52,194 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 11:02:43] 2025-06-06 08:58:52,195 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 11:02:43] 2025-06-06 08:58:52,195 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 11:02:43] 2025-06-06 08:58:52,198 | INFO     | fitting pss+swap vs Time
[2025-06-06 11:02:43] 2025-06-06 08:58:52,199 | INFO     | sum of square deviations: 964976232.5
[2025-06-06 11:02:43] 2025-06-06 08:58:52,199 | INFO     | sum of deviations: 2956308788.499996
[2025-06-06 11:02:43] 2025-06-06 08:58:52,200 | INFO     | mean x: 1749195872.5
[2025-06-06 11:02:43] 2025-06-06 08:58:52,200 | INFO     | mean y: 2309738.9383561644
[2025-06-06 11:02:43] 2025-06-06 08:58:52,200 | INFO     | -- intersect: -5356540517.178878
[2025-06-06 11:02:43] 2025-06-06 08:58:52,200 | INFO     | intersect: -5356540517.178878
[2025-06-06 11:02:43] 2025-06-06 08:58:52,200 | INFO     | chi2: 2.6038230729323373
[2025-06-06 11:02:43] 2025-06-06 08:58:52,201 | INFO     | sum of square deviations: 869188390.0
[2025-06-06 11:02:43] 2025-06-06 08:58:52,201 | INFO     | sum of deviations: 12213867923.000002
[2025-06-06 11:02:43] 2025-06-06 08:58:52,201 | INFO     | mean x: 1749195720.0
[2025-06-06 11:02:43] 2025-06-06 08:58:52,202 | INFO     | mean y: 2324061.425531915
[2025-06-06 11:02:43] 2025-06-06 08:58:52,202 | INFO     | -- intersect: -24577439936.06285
[2025-06-06 11:02:43] 2025-06-06 08:58:52,202 | INFO     | intersect: -24577439936.06285
[2025-06-06 11:02:43] 2025-06-06 08:58:52,202 | INFO     | chi2: 1.7630219249734216
[2025-06-06 11:02:43] 2025-06-06 08:58:52,202 | INFO     | current chi2=1.7630219249734216 (change=32.291024559208395 %)
[2025-06-06 11:02:43] 2025-06-06 08:58:52,202 | INFO     | sum of square deviations: 779958810.0
[2025-06-06 11:02:43] 2025-06-06 08:58:52,203 | INFO     | sum of deviations: 11911112631.499998
[2025-06-06 11:02:43] 2025-06-06 08:58:52,203 | INFO     | mean x: 1749195567.5
[2025-06-06 11:02:43] 2025-06-06 08:58:52,203 | INFO     | mean y: 2323544.1838235296
[2025-06-06 11:02:43] 2025-06-06 08:58:52,203 | INFO     | -- intersect: -26710453017.713154
[2025-06-06 11:02:43] 2025-06-06 08:58:52,203 | INFO     | intersect: -26710453017.713154
[2025-06-06 11:02:43] 2025-06-06 08:58:52,204 | INFO     | chi2: 1.7655733412577652
[2025-06-06 11:02:43] 2025-06-06 08:58:52,204 | INFO     | current chi2=1.7655733412577652 (change=-0.14471835251748763 %)
[2025-06-06 11:02:43] 2025-06-06 08:58:52,204 | INFO     | right removable region: 135
[2025-06-06 11:02:43] 2025-06-06 08:58:52,204 | INFO     | sum of square deviations: 869188390.0
[2025-06-06 11:02:43] 2025-06-06 08:58:52,205 | INFO     | sum of deviations: -20778977597.0
[2025-06-06 11:02:43] 2025-06-06 08:58:52,205 | INFO     | mean x: 1749196025.0
[2025-06-06 11:02:43] 2025-06-06 08:58:52,205 | INFO     | mean y: 2347028.489361702
[2025-06-06 11:02:43] 2025-06-06 08:58:52,205 | INFO     | -- intersect: 41818949084.387115
[2025-06-06 11:02:43] 2025-06-06 08:58:52,205 | INFO     | intersect: 41818949084.387115
[2025-06-06 11:02:43] 2025-06-06 08:58:52,206 | INFO     | chi2: 0.9255634681534958
[2025-06-06 11:02:43] 2025-06-06 08:58:52,206 | INFO     | current chi2=0.9255634681534958 (change=64.45367284071426 %)
[2025-06-06 11:02:43] 2025-06-06 08:58:52,206 | INFO     | sum of square deviations: 779958810.0
[2025-06-06 11:02:43] 2025-06-06 08:58:52,207 | INFO     | sum of deviations: -20654919609.5
[2025-06-06 11:02:43] 2025-06-06 08:58:52,207 | INFO     | mean x: 1749196177.5
[2025-06-06 11:02:43] 2025-06-06 08:58:52,207 | INFO     | mean y: 2346772.669117647
[2025-06-06 11:02:43] 2025-06-06 08:58:52,207 | INFO     | -- intersect: 46324672983.08425
[2025-06-06 11:02:43] 2025-06-06 08:58:52,207 | INFO     | intersect: 46324672983.08425
[2025-06-06 11:02:43] 2025-06-06 08:58:52,207 | INFO     | chi2: 0.918901204322077
[2025-06-06 11:02:43] 2025-06-06 08:58:52,208 | INFO     | current chi2=0.918901204322077 (change=0.719806265118698 %)
[2025-06-06 11:02:43] 2025-06-06 08:58:52,208 | INFO     | left removable region: 20
[2025-06-06 11:02:43] 2025-06-06 08:58:52,208 | INFO     | sum of square deviations: 471562330.0
[2025-06-06 11:02:43] 2025-06-06 08:58:52,209 | INFO     | sum of deviations: -7778003249.999999
[2025-06-06 11:02:43] 2025-06-06 08:58:52,209 | INFO     | mean x: 1749196147.0
[2025-06-06 11:02:43] 2025-06-06 08:58:52,209 | INFO     | mean y: 2358282.0347826085
[2025-06-06 11:02:43] 2025-06-06 08:58:52,209 | INFO     | -- intersect: 28853800500.189648
[2025-06-06 11:02:43] 2025-06-06 08:58:52,209 | INFO     | intersect: 28853800500.189648
[2025-06-06 11:02:43] 2025-06-06 08:58:52,209 | INFO     | chi2: 0.03445636938930782
[2025-06-06 11:02:43] 2025-06-06 08:58:52,209 | INFO     | -- intersect: 28853800500.189648
[2025-06-06 11:02:43] 2025-06-06 08:58:52,209 | INFO     | current memory leak: -16.49 B/s (using 115 data points, chi2=0.03)
[2025-06-06 11:02:43] 2025-06-06 08:58:52,210 | INFO     | ..............................
[2025-06-06 11:02:43] 2025-06-06 08:58:52,210 | INFO     | . Timing measurements:
[2025-06-06 11:02:43] 2025-06-06 08:58:52,210 | INFO     | . get job = 0 s
[2025-06-06 11:02:43] 2025-06-06 08:58:52,210 | INFO     | . initial setup = 1 s
[2025-06-06 11:02:43] 2025-06-06 08:58:52,210 | INFO     | . payload setup = 7 s
[2025-06-06 11:02:43] 2025-06-06 08:58:52,210 | INFO     | . stage-in = 0 s
[2025-06-06 11:02:43] 2025-06-06 08:58:52,210 | INFO     | . payload execution = 8877 s
[2025-06-06 11:02:43] 2025-06-06 08:58:52,211 | INFO     | . stage-out = 0 s
[2025-06-06 11:02:43] 2025-06-06 08:58:52,211 | INFO     | . log creation = 0 s
[2025-06-06 11:02:43] 2025-06-06 08:58:52,211 | INFO     | ..............................
[2025-06-06 11:02:43] 2025-06-06 08:58:52,313 | INFO     | 
[2025-06-06 11:02:43] 2025-06-06 08:58:52,313 | INFO     | job summary report
[2025-06-06 11:02:43] 2025-06-06 08:58:52,314 | INFO     | --------------------------------------------------
[2025-06-06 11:02:43] 2025-06-06 08:58:52,314 | INFO     | PanDA job id: 6678313725
[2025-06-06 11:02:43] 2025-06-06 08:58:52,314 | INFO     | task id: 45006595
[2025-06-06 11:02:43] 2025-06-06 08:58:52,314 | INFO     | errors: (none)
[2025-06-06 11:02:43] 2025-06-06 08:58:52,314 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 11:02:43] 2025-06-06 08:58:52,314 | INFO     | pilot state: finished 
[2025-06-06 11:02:43] 2025-06-06 08:58:52,314 | INFO     | transexitcode: 0
[2025-06-06 11:02:43] 2025-06-06 08:58:52,314 | INFO     | exeerrorcode: 0
[2025-06-06 11:02:43] 2025-06-06 08:58:52,314 | INFO     | exeerrordiag: 
[2025-06-06 11:02:43] 2025-06-06 08:58:52,314 | INFO     | exitcode: 0
[2025-06-06 11:02:43] 2025-06-06 08:58:52,314 | INFO     | exitmsg: OK
[2025-06-06 11:02:43] 2025-06-06 08:58:52,314 | INFO     | cpuconsumptiontime: 33808 s
[2025-06-06 11:02:43] 2025-06-06 08:58:52,315 | INFO     | nevents: 400
[2025-06-06 11:02:43] 2025-06-06 08:58:52,315 | INFO     | neventsw: 0
[2025-06-06 11:02:43] 2025-06-06 08:58:52,315 | INFO     | pid: 908574
[2025-06-06 11:02:43] 2025-06-06 08:58:52,315 | INFO     | pgrp: 908574
[2025-06-06 11:02:43] 2025-06-06 08:58:52,315 | INFO     | corecount: 4
[2025-06-06 11:02:43] 2025-06-06 08:58:52,315 | INFO     | event service: False
[2025-06-06 11:02:43] 2025-06-06 08:58:52,315 | INFO     | sizes: {0: 2397351, 4: 2397557, 11: 2397585, 8888: 2425376, 8889: 2434395, 8894: 2434509}
[2025-06-06 11:02:43] 2025-06-06 08:58:52,315 | INFO     | --------------------------------------------------
[2025-06-06 11:02:43] 2025-06-06 08:58:52,315 | INFO     | 
[2025-06-06 11:02:43] 2025-06-06 08:58:52,315 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-06-06 11:02:43] 2025-06-06 08:58:52,335 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 11:02:43] 2025-06-06 08:58:52,335 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 11:02:43] 2025-06-06 08:58:52,336 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 11:02:43] 2025-06-06 08:58:52,336 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 11:02:43] 2025-06-06 08:58:52,336 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 11:02:43] 2025-06-06 08:58:52,336 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 11:02:43] 2025-06-06 08:58:52,336 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 11:02:43] 2025-06-06 08:58:52,336 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 11:02:43] 2025-06-06 08:58:52,336 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 11:02:43] 2025-06-06 08:58:52,336 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 11:02:43] 2025-06-06 08:58:52,336 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 11:02:43] 2025-06-06 08:58:52,336 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 11:02:43] 2025-06-06 08:58:52,336 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 11:02:43] 2025-06-06 08:58:52,336 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 11:02:43] 2025-06-06 08:58:52,337 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 11:02:43] 2025-06-06 08:58:52,337 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 11:02:43] 2025-06-06 08:58:52,337 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 11:02:43] 2025-06-06 08:58:52,337 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 11:02:43] 2025-06-06 08:58:52,337 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 11:02:43] 2025-06-06 08:58:52,337 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 11:02:43] 2025-06-06 08:58:52,337 | INFO     | job 6678313725 has completed (purged errors)
[2025-06-06 11:02:43] 2025-06-06 08:58:52,337 | INFO     | overall cleanup function is called
[2025-06-06 11:02:43] 2025-06-06 08:58:53,344 | INFO     | --- collectZombieJob: --- 10, [908574]
[2025-06-06 11:02:43] 2025-06-06 08:58:53,345 | INFO     | zombie collector waiting for pid 908574
[2025-06-06 11:02:43] 2025-06-06 08:58:53,345 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 11:02:43] 2025-06-06 08:58:53,345 | INFO     | collected zombie processes
[2025-06-06 11:02:43] 2025-06-06 08:58:53,345 | INFO     | will attempt to kill all subprocesses of pid=908574
[2025-06-06 11:02:43] 2025-06-06 08:58:53,680 | INFO     | process IDs to be killed: [908574] (in reverse order)
[2025-06-06 11:02:43] 2025-06-06 08:58:53,779 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 11:02:43] 2025-06-06 08:58:53,780 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 11:02:43] 2025-06-06 08:58:53,790 | INFO     | did not find any defunct processes belonging to 908574
[2025-06-06 11:02:43] 2025-06-06 08:58:53,800 | INFO     | did not find any defunct processes belonging to 908574
[2025-06-06 11:02:43] 2025-06-06 08:58:53,801 | INFO     | ready for new job
[2025-06-06 11:02:43] 2025-06-06 08:58:53,801 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 11:02:43] 2025-06-06 08:58:53,803 | INFO     | **************************************
[2025-06-06 11:02:43] 2025-06-06 08:58:53,803 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 11:02:43] 2025-06-06 08:58:53,803 | INFO     | **************************************
[2025-06-06 11:02:43] 2025-06-06 08:58:53,803 | INFO     | 
[2025-06-06 11:02:43] 2025-06-06 08:58:53,807 | INFO     | architecture information:
[2025-06-06 11:02:43] 2025-06-06 08:58:53,808 | INFO     | executing command: cat /etc/os-release
[2025-06-06 11:02:43] 2025-06-06 08:58:53,823 | INFO     | cat /etc/os-release:
[2025-06-06 11:02:43] NAME="CentOS Linux"
[2025-06-06 11:02:43] VERSION="7 (Core)"
[2025-06-06 11:02:43] ID="centos"
[2025-06-06 11:02:43] ID_LIKE="rhel fedora"
[2025-06-06 11:02:43] VERSION_ID="7"
[2025-06-06 11:02:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 11:02:43] ANSI_COLOR="0;31"
[2025-06-06 11:02:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 11:02:43] HOME_URL="https://www.centos.org/"
[2025-06-06 11:02:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 11:02:43] 
[2025-06-06 11:02:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 11:02:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 11:02:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 11:02:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 11:02:43] 
[2025-06-06 11:02:43] 2025-06-06 08:58:53,823 | INFO     | **************************************
[2025-06-06 11:02:43] 2025-06-06 08:58:54,326 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-06-06 11:02:43] 2025-06-06 08:58:54,341 | INFO     | sufficient remaining disk space (647642480640 B)
[2025-06-06 11:02:43] 2025-06-06 08:58:54,342 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 11:02:43] 2025-06-06 08:58:54,342 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 11:02:43] 2025-06-06 08:58:54,342 | INFO     | update_server=False
[2025-06-06 11:02:43] 2025-06-06 08:58:54,342 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 11:02:43] 2025-06-06 08:58:54,342 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 11:02:43] 2025-06-06 08:58:54,343 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 11:02:43] 2025-06-06 08:58:54,343 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 11:02:43] 2025-06-06 08:58:54,343 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 11:02:43] 2025-06-06 08:58:54,625 | INFO     | all data control threads have been joined
[2025-06-06 11:02:43] 2025-06-06 08:58:54,817 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 11:02:43] 2025-06-06 08:58:55,042 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 11:02:43] 2025-06-06 08:58:55,043 | INFO     | aborting loop
[2025-06-06 11:02:43] 2025-06-06 08:58:55,334 | INFO     | all payload control threads have been joined
[2025-06-06 11:02:43] 2025-06-06 08:58:55,347 | INFO     | [job] retrieve thread has finished
[2025-06-06 11:02:43] 2025-06-06 08:58:55,631 | INFO     | [data] control thread has finished
[2025-06-06 11:02:43] 2025-06-06 08:58:55,881 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 11:02:43] 2025-06-06 08:58:55,908 | INFO     | [payload] failed_post thread has finished
[2025-06-06 11:02:43] 2025-06-06 08:58:55,959 | INFO     | all job control threads have been joined
[2025-06-06 11:02:43] 2025-06-06 08:58:56,047 | INFO     | [job] job monitor thread has finished
[2025-06-06 11:02:43] 2025-06-06 08:58:56,077 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 11:02:43] 2025-06-06 08:58:56,339 | INFO     | [payload] control thread has finished
[2025-06-06 11:02:43] 2025-06-06 08:58:56,499 | INFO     | [job] validate thread has finished
[2025-06-06 11:02:43] 2025-06-06 08:58:56,585 | INFO     | [payload] validate_post thread has finished
[2025-06-06 11:02:43] 2025-06-06 08:58:56,718 | INFO     | [data] copytool_in thread has finished
[2025-06-06 11:02:43] 2025-06-06 08:58:56,822 | INFO     | [data] copytool_out thread has finished
[2025-06-06 11:02:43] 2025-06-06 08:58:56,823 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 11:02:43] 2025-06-06 08:58:56,823 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 11:02:43] 2025-06-06 08:58:56,964 | INFO     | [job] control thread has finished
[2025-06-06 11:02:43] 2025-06-06 08:58:57,323 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 11:02:43] 2025-06-06 08:58:57,489 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 11:02:43] 2025-06-06 08:58:58,328 | INFO     | [job] queue monitor thread has finished
[2025-06-06 11:02:43] 2025-06-06 08:59:01,494 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 11:02:43] 2025-06-06 08:59:03,365 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22544457910080)>', '<ExcThread(monitor, started 22543746463488)>']
[2025-06-06 11:02:43] 2025-06-06 08:59:03,384 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 11:02:43] 2025-06-06 08:59:03,385 | INFO     | [monitor] control thread has ended
[2025-06-06 11:02:43] 2025-06-06 08:59:08,389 | INFO     | all workflow threads have been joined
[2025-06-06 11:02:43] 2025-06-06 08:59:08,390 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 11:02:43] 2025-06-06 08:59:08,390 | INFO     | traces error code: 0
[2025-06-06 11:02:43] 2025-06-06 08:59:08,390 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 11:02:43] 2025-06-06 08:59:08,542 [wrapper] ==== pilot stdout END ====
[2025-06-06 11:02:43] 2025-06-06 08:59:08,545 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 11:02:43] 2025-06-06 08:59:08,548 [wrapper] pilotpid: 884512
[2025-06-06 11:02:43] 2025-06-06 08:59:08,550 [wrapper] Pilot exit status: 0
[2025-06-06 11:02:43] 2025-06-06 08:59:08,558 [wrapper] pandaids: 6678313725
[2025-06-06 11:02:43] 2025-06-06 08:59:08,619 [wrapper] cleanup supervisor_pilot 1109895 884513
[2025-06-06 11:02:43] 2025-06-06 08:59:08,622 [wrapper] Test setup, not cleaning
[2025-06-06 11:02:43] 2025-06-06 08:59:08,625 [wrapper] apfmon messages muted
[2025-06-06 11:02:43] 2025-06-06 08:59:08,627 [wrapper] ==== wrapper stdout END ====
[2025-06-06 11:02:43] 2025-06-06 08:59:08,629 [wrapper] ==== wrapper stderr END ====
[2025-06-06 11:02:43]  *** Error codes and diagnostics ***
[2025-06-06 11:02:43]     "exeErrorCode": 0,
[2025-06-06 11:02:43]     "exeErrorDiag": "",
[2025-06-06 11:02:43]     "pilotErrorCode": 0,
[2025-06-06 11:02:43]     "pilotErrorDiag": "",
[2025-06-06 11:02:43]  *** Listing of results directory ***
[2025-06-06 11:02:43] total 393648
[2025-06-06 11:02:43] -rw-r--r-- 1 boinc boinc    495897 Jun  4 06:04 pilot3.tar.gz
[2025-06-06 11:02:43] -rwx------ 1 boinc boinc     37140 Jun  4 06:39 runpilot2-wrapper.sh
[2025-06-06 11:02:43] -rw-r--r-- 1 boinc boinc      5111 Jun  4 06:39 queuedata.json
[2025-06-06 11:02:43] -rw-r--r-- 1 boinc boinc       100 Jun  6 08:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 11:02:43] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 08:30 run_atlas
[2025-06-06 11:02:43] -rw-r--r-- 1 boinc boinc       105 Jun  6 08:30 job.xml
[2025-06-06 11:02:43] -rw-r--r-- 1 boinc boinc      6633 Jun  6 08:30 init_data.xml
[2025-06-06 11:02:43] -rw-r--r-- 2 boinc boinc 215765887 Jun  6 08:30 EVNT.45006593._002111.pool.root.1
[2025-06-06 11:02:43] -rw-r--r-- 2 boinc boinc     15093 Jun  6 08:30 start_atlas.sh
[2025-06-06 11:02:43] drwxrwx--x 2 boinc boinc      4096 Jun  6 08:30 shared
[2025-06-06 11:02:43] -rw-r--r-- 2 boinc boinc    508885 Jun  6 08:30 input.tar.gz
[2025-06-06 11:02:43] -rw-r--r-- 1 boinc boinc         0 Jun  6 08:30 boinc_lockfile
[2025-06-06 11:02:43] -rw-r--r-- 1 boinc boinc      2524 Jun  6 08:30 pandaJob.out
[2025-06-06 11:02:43] -rw------- 1 boinc boinc    988117 Jun  6 08:30 agis_schedconf.cvmfs.json
[2025-06-06 11:02:43] -rw------- 1 boinc boinc   1598969 Jun  6 08:30 agis_ddmendpoints.agis.ALL.json
[2025-06-06 11:02:43] drwx------ 4 boinc boinc      4096 Jun  6 08:30 pilot3
[2025-06-06 11:02:43] -rw------- 1 boinc boinc 181259757 Jun  6 10:58 HITS.45006595._052705.pool.root.1
[2025-06-06 11:02:43] -rw-r--r-- 1 boinc boinc       529 Jun  6 10:58 boinc_task_state.xml
[2025-06-06 11:02:43] -rw------- 1 boinc boinc        95 Jun  6 10:58 pilot_heartbeat.json
[2025-06-06 11:02:43] -rw------- 1 boinc boinc      1033 Jun  6 10:58 memory_monitor_summary.json
[2025-06-06 11:02:43] -rw------- 1 boinc boinc    273398 Jun  6 10:58 log.45006595._052705.job.log.tgz.1
[2025-06-06 11:02:43] -rw------- 1 boinc boinc      7718 Jun  6 10:58 heartbeat.json
[2025-06-06 11:02:43] -rw------- 1 boinc boinc      4486 Jun  6 10:59 pilotlog.txt
[2025-06-06 11:02:43] -rw------- 1 boinc boinc    840776 Jun  6 10:59 log.45006595._052705.job.log.1
[2025-06-06 11:02:43] -rw------- 1 boinc boinc       357 Jun  6 10:59 output.list
[2025-06-06 11:02:43] -rw-r--r-- 1 boinc boinc       620 Jun  6 10:59 runtime_log
[2025-06-06 11:02:43] -rw------- 1 boinc boinc   1136640 Jun  6 10:59 result.tar.gz
[2025-06-06 11:02:43] -rw-r--r-- 1 boinc boinc      9025 Jun  6 10:59 runtime_log.err
[2025-06-06 11:02:43] -rw------- 1 boinc boinc       662 Jun  6 10:59 K3JMDmA5ug7n9Rq4apOajLDm4fhM0noT9bVof3QYDmLiaKDmFBDBRo.diag
[2025-06-06 11:02:43] -rw-r--r-- 1 boinc boinc        26 Jun  6 11:02 wrapper_checkpoint.txt
[2025-06-06 11:02:43] -rw-r--r-- 1 boinc boinc      8192 Jun  6 11:02 boinc_mmap_file
[2025-06-06 11:02:43] -rw-r--r-- 1 boinc boinc     20612 Jun  6 11:02 stderr.txt
[2025-06-06 11:02:43] HITS file was successfully produced:
[2025-06-06 11:02:43] -rw------- 1 boinc boinc 181259757 Jun  6 10:58 shared/HITS.pool.root.1
[2025-06-06 11:02:43]  *** Contents of shared directory: ***
[2025-06-06 11:02:43] total 389360
[2025-06-06 11:02:43] -rw-r--r-- 2 boinc boinc 215765887 Jun  6 08:30 ATLAS.root_0
[2025-06-06 11:02:43] -rw-r--r-- 2 boinc boinc     15093 Jun  6 08:30 start_atlas.sh
[2025-06-06 11:02:43] -rw-r--r-- 2 boinc boinc    508885 Jun  6 08:30 input.tar.gz
[2025-06-06 11:02:43] -rw------- 1 boinc boinc 181259757 Jun  6 10:58 HITS.pool.root.1
[2025-06-06 11:02:43] -rw------- 1 boinc boinc   1136640 Jun  6 10:59 result.tar.gz
11:02:45 (878798): run_atlas exited; CPU time 34170.768028
11:02:45 (878798): called boinc_finish(0)

</stderr_txt>
]]>

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