Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:35:38 (249045): wrapper (7.7.26015): starting
08:35:38 (249045): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:35:38] Arguments: --nthreads 8
[2025-06-04 08:35:38] Threads: 8
[2025-06-04 08:35:38] Checking for CVMFS
[2025-06-04 08:35:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:35:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:35:38] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:35:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:35:39] 2.11.2.0 7041 28790 214840 146780 1 254 17705154 18432001 12557 130560 0 118898070 99.594 95168504 30976 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 08:35:39] CVMFS is ok
[2025-06-04 08:35:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:35:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:35:39] Further information can be found at the LHC@home message board.
[2025-06-04 08:35:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:35:39] Checking for apptainer binary...
[2025-06-04 08:35:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:35:39] Running /usr/bin/apptainer --version
[2025-06-04 08:35:39] apptainer version 1.3.2-1.el7
[2025-06-04 08:35:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:35:39] c-211-33-2.aglt2.org
[2025-06-04 08:35:39] apptainer works
[2025-06-04 08:35:39] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:35:39] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:35:40] Starting ATLAS job with PandaID=6678363756
[2025-06-04 08:35:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:04:46]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:04:46]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 10:04:46]  is_altstaged=None
[2025-06-04 10:04:46]  is_tar=False
[2025-06-04 10:04:46]  lfn=log.45006595._053631.job.log.tgz.1
[2025-06-04 10:04:46]  mtime=0
[2025-06-04 10:04:46]  protocol_id=None
[2025-06-04 10:04:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:04:46]  replicas=None
[2025-06-04 10:04:46]  scope=mc23_13p6TeV
[2025-06-04 10:04:46]  status=None
[2025-06-04 10:04:46]  status_code=0
[2025-06-04 10:04:46]  storage_token=
[2025-06-04 10:04:46]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6678363756/log.45006595._053631.job.log.tgz.1
[2025-06-04 10:04:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/95/78/log.45006595._053631.job.log.tgz.1
[2025-06-04 10:04:46]  workdir=None
[2025-06-04 10:04:46] ]
[2025-06-04 10:04:46] 2025-06-04 14:04:20,340 | INFO     | transferring file log.45006595._053631.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6678363756/log.45006595._053631.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:04:46] 2025-06-04 14:04:20,340 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6678363756/log.45006595._053631.job.log.tgz.1 /tmp/boinchome/slots/4/log.45006595._053631.job
[2025-06-04 10:04:46] 2025-06-04 14:04:20,373 | INFO     | adding to output.list: log.45006595._053631.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/95/78/log.45006595._053631.job.log.tg
[2025-06-04 10:04:46] 2025-06-04 14:04:20,374 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:04:46] 2025-06-04 14:04:20,374 | INFO     | summary of transferred files:
[2025-06-04 10:04:46] 2025-06-04 14:04:20,374 | INFO     |  -- lfn=log.45006595._053631.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:04:46] 2025-06-04 14:04:20,375 | INFO     | stage-out finished correctly
[2025-06-04 10:04:46] 2025-06-04 14:04:20,469 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:04:46] 2025-06-04 14:04:22,331 | INFO     | job 6678363756 has state=finished
[2025-06-04 10:04:46] 2025-06-04 14:04:22,331 | INFO     | preparing for final server update for job 6678363756 in state='finished'
[2025-06-04 10:04:46] 2025-06-04 14:04:22,331 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:04:46] 2025-06-04 14:04:22,332 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:04:46] 2025-06-04 14:04:22,332 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:04:46] 2025-06-04 14:04:22,332 | INFO     | job 6678363756 has finished - writing final server update
[2025-06-04 10:04:46] 2025-06-04 14:04:22,332 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:04:46] 2025-06-04 14:04:22,337 | INFO     | executing command: lscpu
[2025-06-04 10:04:46] 2025-06-04 14:04:22,390 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:04:46] 2025-06-04 14:04:23,932 | WARNING  | process 261096 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 10:04:46] 2025-06-04 14:04:23,932 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6678363756/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:04:46] 2025-06-04 14:04:24,219 | INFO     | number of running child processes to parent process 261096: 1
[2025-06-04 10:04:46] 2025-06-04 14:04:24,219 | INFO     | maximum number of monitored processes: 6
[2025-06-04 10:04:46] 2025-06-04 14:04:26,568 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 10:04:46] 2025-06-04 14:04:26,569 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6678363756/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:04:46] 2025-06-04 14:04:26,569 | INFO     | extracted standard info from prmon json
[2025-06-04 10:04:46] 2025-06-04 14:04:26,569 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:04:46] 2025-06-04 14:04:26,569 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:04:46] 2025-06-04 14:04:26,569 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:04:46] 2025-06-04 14:04:26,569 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:04:46] 2025-06-04 14:04:26,571 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:04:46] 2025-06-04 14:04:26,571 | INFO     | sum of square deviations: 158737860.0
[2025-06-04 10:04:46] 2025-06-04 14:04:26,571 | INFO     | sum of deviations: -2787775914.5
[2025-06-04 10:04:46] 2025-06-04 14:04:26,571 | INFO     | mean x: 1749043296.5
[2025-06-04 10:04:46] 2025-06-04 14:04:26,571 | INFO     | mean y: 2515206.2375
[2025-06-04 10:04:46] 2025-06-04 14:04:26,571 | INFO     | -- intersect: 30719451766.931858
[2025-06-04 10:04:46] 2025-06-04 14:04:26,571 | INFO     | intersect: 30719451766.931858
[2025-06-04 10:04:46] 2025-06-04 14:04:26,571 | INFO     | chi2: 0.002952838416651831
[2025-06-04 10:04:46] 2025-06-04 14:04:26,571 | INFO     | -- intersect: 30719451766.931858
[2025-06-04 10:04:46] 2025-06-04 14:04:26,571 | INFO     | current memory leak: -17.56 B/s (using 80 data points, chi2=0.00)
[2025-06-04 10:04:46] 2025-06-04 14:04:26,572 | INFO     | ..............................
[2025-06-04 10:04:46] 2025-06-04 14:04:26,572 | INFO     | . Timing measurements:
[2025-06-04 10:04:46] 2025-06-04 14:04:26,572 | INFO     | . get job = 0 s
[2025-06-04 10:04:46] 2025-06-04 14:04:26,572 | INFO     | . initial setup = 2 s
[2025-06-04 10:04:46] 2025-06-04 14:04:26,572 | INFO     | . payload setup = 7 s
[2025-06-04 10:04:46] 2025-06-04 14:04:26,572 | INFO     | . stage-in = 0 s
[2025-06-04 10:04:46] 2025-06-04 14:04:26,572 | INFO     | . payload execution = 5280 s
[2025-06-04 10:04:46] 2025-06-04 14:04:26,572 | INFO     | . stage-out = 1 s
[2025-06-04 10:04:46] 2025-06-04 14:04:26,572 | INFO     | . log creation = 0 s
[2025-06-04 10:04:46] 2025-06-04 14:04:26,572 | INFO     | ..............................
[2025-06-04 10:04:46] 2025-06-04 14:04:26,793 | INFO     | 
[2025-06-04 10:04:46] 2025-06-04 14:04:26,794 | INFO     | job summary report
[2025-06-04 10:04:46] 2025-06-04 14:04:26,794 | INFO     | --------------------------------------------------
[2025-06-04 10:04:46] 2025-06-04 14:04:26,794 | INFO     | PanDA job id: 6678363756
[2025-06-04 10:04:46] 2025-06-04 14:04:26,794 | INFO     | task id: 45006595
[2025-06-04 10:04:46] 2025-06-04 14:04:26,794 | INFO     | errors: (none)
[2025-06-04 10:04:46] 2025-06-04 14:04:26,794 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:04:46] 2025-06-04 14:04:26,794 | INFO     | pilot state: finished 
[2025-06-04 10:04:46] 2025-06-04 14:04:26,794 | INFO     | transexitcode: 0
[2025-06-04 10:04:46] 2025-06-04 14:04:26,794 | INFO     | exeerrorcode: 0
[2025-06-04 10:04:46] 2025-06-04 14:04:26,794 | INFO     | exeerrordiag: 
[2025-06-04 10:04:46] 2025-06-04 14:04:26,794 | INFO     | exitcode: 0
[2025-06-04 10:04:46] 2025-06-04 14:04:26,794 | INFO     | exitmsg: OK
[2025-06-04 10:04:46] 2025-06-04 14:04:26,794 | INFO     | cpuconsumptiontime: 35057 s
[2025-06-04 10:04:46] 2025-06-04 14:04:26,794 | INFO     | nevents: 400
[2025-06-04 10:04:46] 2025-06-04 14:04:26,794 | INFO     | neventsw: 0
[2025-06-04 10:04:46] 2025-06-04 14:04:26,794 | INFO     | pid: 261096
[2025-06-04 10:04:46] 2025-06-04 14:04:26,794 | INFO     | pgrp: 261096
[2025-06-04 10:04:46] 2025-06-04 14:04:26,794 | INFO     | corecount: 8
[2025-06-04 10:04:46] 2025-06-04 14:04:26,794 | INFO     | event service: False
[2025-06-04 10:04:46] 2025-06-04 14:04:26,794 | INFO     | sizes: {0: 2397342, 5: 2397548, 11: 2397604, 5291: 2423924, 5293: 2432921, 5299: 2433035}
[2025-06-04 10:04:46] 2025-06-04 14:04:26,794 | INFO     | --------------------------------------------------
[2025-06-04 10:04:46] 2025-06-04 14:04:26,795 | INFO     | 
[2025-06-04 10:04:46] 2025-06-04 14:04:26,795 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-04 10:04:46] 2025-06-04 14:04:26,815 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:04:46] 2025-06-04 14:04:26,816 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:04:46] 2025-06-04 14:04:26,816 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:04:46] 2025-06-04 14:04:26,816 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:04:46] 2025-06-04 14:04:26,816 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:04:46] 2025-06-04 14:04:26,816 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:04:46] 2025-06-04 14:04:26,816 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:04:46] 2025-06-04 14:04:26,816 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:04:46] 2025-06-04 14:04:26,816 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:04:46] 2025-06-04 14:04:26,816 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:04:46] 2025-06-04 14:04:26,816 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:04:46] 2025-06-04 14:04:26,816 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:04:46] 2025-06-04 14:04:26,816 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:04:46] 2025-06-04 14:04:26,816 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:04:46] 2025-06-04 14:04:26,816 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:04:46] 2025-06-04 14:04:26,816 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:04:46] 2025-06-04 14:04:26,816 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:04:46] 2025-06-04 14:04:26,816 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:04:46] 2025-06-04 14:04:26,816 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:04:46] 2025-06-04 14:04:26,817 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:04:46] 2025-06-04 14:04:26,817 | INFO     | job 6678363756 has completed (purged errors)
[2025-06-04 10:04:46] 2025-06-04 14:04:26,817 | INFO     | overall cleanup function is called
[2025-06-04 10:04:46] 2025-06-04 14:04:27,823 | INFO     | --- collectZombieJob: --- 10, [261096]
[2025-06-04 10:04:46] 2025-06-04 14:04:27,824 | INFO     | zombie collector waiting for pid 261096
[2025-06-04 10:04:46] 2025-06-04 14:04:27,824 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:04:46] 2025-06-04 14:04:27,824 | INFO     | collected zombie processes
[2025-06-04 10:04:46] 2025-06-04 14:04:27,824 | INFO     | will attempt to kill all subprocesses of pid=261096
[2025-06-04 10:04:46] 2025-06-04 14:04:28,112 | INFO     | process IDs to be killed: [261096] (in reverse order)
[2025-06-04 10:04:46] 2025-06-04 14:04:28,191 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:04:46] 2025-06-04 14:04:28,191 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:04:46] 2025-06-04 14:04:28,201 | INFO     | did not find any defunct processes belonging to 261096
[2025-06-04 10:04:46] 2025-06-04 14:04:28,211 | INFO     | did not find any defunct processes belonging to 261096
[2025-06-04 10:04:46] 2025-06-04 14:04:28,211 | INFO     | ready for new job
[2025-06-04 10:04:46] 2025-06-04 14:04:28,211 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:04:46] 2025-06-04 14:04:28,213 | INFO     | **************************************
[2025-06-04 10:04:46] 2025-06-04 14:04:28,213 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:04:46] 2025-06-04 14:04:28,213 | INFO     | **************************************
[2025-06-04 10:04:46] 2025-06-04 14:04:28,213 | INFO     | 
[2025-06-04 10:04:46] 2025-06-04 14:04:28,218 | INFO     | architecture information:
[2025-06-04 10:04:46] 2025-06-04 14:04:28,218 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:04:46] 2025-06-04 14:04:28,234 | INFO     | cat /etc/os-release:
[2025-06-04 10:04:46] NAME="CentOS Linux"
[2025-06-04 10:04:46] VERSION="7 (Core)"
[2025-06-04 10:04:46] ID="centos"
[2025-06-04 10:04:46] ID_LIKE="rhel fedora"
[2025-06-04 10:04:46] VERSION_ID="7"
[2025-06-04 10:04:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:04:46] ANSI_COLOR="0;31"
[2025-06-04 10:04:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:04:46] HOME_URL="https://www.centos.org/"
[2025-06-04 10:04:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:04:46] 
[2025-06-04 10:04:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:04:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:04:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:04:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:04:46] 
[2025-06-04 10:04:46] 2025-06-04 14:04:28,234 | INFO     | **************************************
[2025-06-04 10:04:46] 2025-06-04 14:04:28,737 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-04 10:04:46] 2025-06-04 14:04:28,771 | INFO     | sufficient remaining disk space (103706263552 B)
[2025-06-04 10:04:46] 2025-06-04 14:04:28,771 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:04:46] 2025-06-04 14:04:28,771 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:04:46] 2025-06-04 14:04:28,771 | INFO     | update_server=False
[2025-06-04 10:04:46] 2025-06-04 14:04:28,771 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:04:46] 2025-06-04 14:04:28,772 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:04:46] 2025-06-04 14:04:28,772 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 10:04:46] 2025-06-04 14:04:28,773 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:04:46] 2025-06-04 14:04:28,773 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:04:46] 2025-06-04 14:04:28,773 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:04:46] 2025-06-04 14:04:28,906 | INFO     | all payload control threads have been joined
[2025-06-04 10:04:46] 2025-06-04 14:04:29,225 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 10:04:46] 2025-06-04 14:04:29,225 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 10:04:46] 2025-06-04 14:04:29,225 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:04:46] 2025-06-04 14:04:29,225 | INFO     | will abort loop
[2025-06-04 10:04:46] 2025-06-04 14:04:29,290 | INFO     | all data control threads have been joined
[2025-06-04 10:04:46] 2025-06-04 14:04:29,778 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:04:46] 2025-06-04 14:04:29,799 | INFO     | all job control threads have been joined
[2025-06-04 10:04:46] 2025-06-04 14:04:29,912 | INFO     | [payload] control thread has finished
[2025-06-04 10:04:46] 2025-06-04 14:04:29,922 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:04:46] 2025-06-04 14:04:30,149 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:04:46] 2025-06-04 14:04:30,166 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:04:46] 2025-06-04 14:04:30,230 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:04:46] 2025-06-04 14:04:30,296 | INFO     | [data] control thread has finished
[2025-06-04 10:04:46] 2025-06-04 14:04:30,446 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:04:46] 2025-06-04 14:04:30,780 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:04:46] 2025-06-04 14:04:30,805 | INFO     | [job] control thread has finished
[2025-06-04 10:04:46] 2025-06-04 14:04:30,866 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:04:46] 2025-06-04 14:04:31,044 | INFO     | [job] validate thread has finished
[2025-06-04 10:04:46] 2025-06-04 14:04:31,072 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:04:46] 2025-06-04 14:04:31,258 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:04:46] 2025-06-04 14:04:31,638 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:04:46] 2025-06-04 14:04:32,643 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:04:46] 2025-06-04 14:04:35,079 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:04:46] 2025-06-04 14:04:39,347 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:04:46] 2025-06-04 14:04:40,352 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:04:46] 2025-06-04 14:04:41,233 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139731167549248)>', '<ExcThread(monitor, started 139730519848704)>']
[2025-06-04 10:04:46] 2025-06-04 14:04:41,845 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:04:46] 2025-06-04 14:04:41,845 | INFO     | [monitor] control thread has ended
[2025-06-04 10:04:46] 2025-06-04 14:04:46,258 | INFO     | all workflow threads have been joined
[2025-06-04 10:04:46] 2025-06-04 14:04:46,258 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:04:46] 2025-06-04 14:04:46,259 | INFO     | traces error code: 0
[2025-06-04 10:04:46] 2025-06-04 14:04:46,259 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:04:46] 2025-06-04 14:04:46,416 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:04:46] 2025-06-04 14:04:46,432 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:04:46] 2025-06-04 14:04:46,446 [wrapper] pilotpid: 254603
[2025-06-04 10:04:46] 2025-06-04 14:04:46,461 [wrapper] Pilot exit status: 0
[2025-06-04 10:04:46] 2025-06-04 14:04:46,522 [wrapper] pandaids: 6678363756
[2025-06-04 10:04:46] 2025-06-04 14:04:46,597 [wrapper] cleanup supervisor_pilot 140965 254604
[2025-06-04 10:04:46] 2025-06-04 14:04:46,600 [wrapper] Test setup, not cleaning
[2025-06-04 10:04:46] 2025-06-04 14:04:46,602 [wrapper] apfmon messages muted
[2025-06-04 10:04:46] 2025-06-04 14:04:46,604 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:04:46] 2025-06-04 14:04:46,607 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:04:46]  *** Error codes and diagnostics ***
[2025-06-04 10:04:46]     "exeErrorCode": 0,
[2025-06-04 10:04:46]     "exeErrorDiag": "",
[2025-06-04 10:04:46]     "pilotErrorCode": 0,
[2025-06-04 10:04:46]     "pilotErrorDiag": "",
[2025-06-04 10:04:46]  *** Listing of results directory ***
[2025-06-04 10:04:46] total 390736
[2025-06-04 10:04:46] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-04 10:04:46] -rwx------ 1 boincer umatlas     37140 Jun  4 01:36 runpilot2-wrapper.sh
[2025-06-04 10:04:46] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 01:36 queuedata.json
[2025-06-04 10:04:46] -rw-r--r-- 1 boincer umatlas       100 Jun  4 08:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:04:46] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 08:35 run_atlas
[2025-06-04 10:04:46] -rw-r--r-- 1 boincer umatlas       105 Jun  4 08:35 job.xml
[2025-06-04 10:04:46] -rw-r--r-- 2 boincer umatlas 213660114 Jun  4 08:35 EVNT.45006593._002146.pool.root.1
[2025-06-04 10:04:46] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:35 start_atlas.sh
[2025-06-04 10:04:46] drwxrwx--x 2 boincer umatlas      4096 Jun  4 08:35 shared
[2025-06-04 10:04:46] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 08:35 input.tar.gz
[2025-06-04 10:04:46] -rw-r--r-- 1 boincer umatlas         0 Jun  4 08:35 boinc_lockfile
[2025-06-04 10:04:46] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 08:35 pandaJob.out
[2025-06-04 10:04:46] -rw------- 1 boincer umatlas    986811 Jun  4 08:35 agis_schedconf.cvmfs.json
[2025-06-04 10:04:46] -rw------- 1 boincer umatlas   1598969 Jun  4 08:35 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:04:46] drwx------ 4 boincer umatlas      4096 Jun  4 08:35 pilot3
[2025-06-04 10:04:46] -rw------- 1 boincer umatlas 180940199 Jun  4 10:03 HITS.45006595._053631.pool.root.1
[2025-06-04 10:04:46] -rw-r--r-- 1 boincer umatlas       529 Jun  4 10:03 boinc_task_state.xml
[2025-06-04 10:04:46] -rw------- 1 boincer umatlas      1046 Jun  4 10:04 memory_monitor_summary.json
[2025-06-04 10:04:46] -rw------- 1 boincer umatlas    324337 Jun  4 10:04 log.45006595._053631.job.log.tgz.1
[2025-06-04 10:04:46] -rw------- 1 boincer umatlas        95 Jun  4 10:04 pilot_heartbeat.json
[2025-06-04 10:04:46] -rw-r--r-- 1 boincer umatlas      6298 Jun  4 10:04 init_data.xml
[2025-06-04 10:04:46] -rw------- 1 boincer umatlas      7741 Jun  4 10:04 heartbeat.json
[2025-06-04 10:04:46] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 10:04 boinc_mmap_file
[2025-06-04 10:04:46] -rw-r--r-- 1 boincer umatlas        27 Jun  4 10:04 wrapper_checkpoint.txt
[2025-06-04 10:04:46] -rw------- 1 boincer umatlas      4735 Jun  4 10:04 pilotlog.txt
[2025-06-04 10:04:46] -rw------- 1 boincer umatlas    514693 Jun  4 10:04 log.45006595._053631.job.log.1
[2025-06-04 10:04:46] -rw------- 1 boincer umatlas       357 Jun  4 10:04 output.list
[2025-06-04 10:04:46] -rw-r--r-- 1 boincer umatlas       620 Jun  4 10:04 runtime_log
[2025-06-04 10:04:46] -rw------- 1 boincer umatlas    860160 Jun  4 10:04 result.tar.gz
[2025-06-04 10:04:46] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 10:04 runtime_log.err
[2025-06-04 10:04:46] -rw------- 1 boincer umatlas       657 Jun  4 10:04 234MDmnyvg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmgnaKDmgB4eTo.diag
[2025-06-04 10:04:46] -rw-r--r-- 1 boincer umatlas     21307 Jun  4 10:04 stderr.txt
[2025-06-04 10:04:46] HITS file was successfully produced:
[2025-06-04 10:04:46] -rw------- 1 boincer umatlas 180940199 Jun  4 10:03 shared/HITS.pool.root.1
[2025-06-04 10:04:46]  *** Contents of shared directory: ***
[2025-06-04 10:04:46] total 386720
[2025-06-04 10:04:46] -rw-r--r-- 2 boincer umatlas 213660114 Jun  4 08:35 ATLAS.root_0
[2025-06-04 10:04:46] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:35 start_atlas.sh
[2025-06-04 10:04:46] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 08:35 input.tar.gz
[2025-06-04 10:04:46] -rw------- 1 boincer umatlas 180940199 Jun  4 10:03 HITS.pool.root.1
[2025-06-04 10:04:46] -rw------- 1 boincer umatlas    860160 Jun  4 10:04 result.tar.gz
10:04:48 (249045): run_atlas exited; CPU time 35188.878309
10:04:48 (249045): called boinc_finish(0)

</stderr_txt>
]]>

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