Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
00:37:25 (3169104): wrapper (7.7.26015): starting
00:37:25 (3169104): wrapper: running run_atlas (--nthreads 3)
[2025-06-05 00:37:25] Arguments: --nthreads 3
[2025-06-05 00:37:25] Threads: 3
[2025-06-05 00:37:25] Checking for CVMFS
[2025-06-05 00:37:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 00:37:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 00:37:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 00:37:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 00:37:25] 2.9.2.0 2227974 3178 70472 146797 1 56 27931214 36864001 0 130560 0 2541107 99.992 759983 52351 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-05 00:37:25] CVMFS is ok
[2025-06-05 00:37:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 00:37:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 00:37:25] Further information can be found at the LHC@home message board.
[2025-06-05 00:37:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:37:25] Checking for apptainer binary...
[2025-06-05 00:37:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 00:37:25] Running /usr/bin/apptainer --version
[2025-06-05 00:37:25] apptainer version 1.3.6-6.1
[2025-06-05 00:37:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 00:37:25] belleA265a
[2025-06-05 00:37:25] apptainer works
[2025-06-05 00:37:25] Set ATHENA_PROC_NUMBER=3
[2025-06-05 00:37:25] Set ATHENA_CORE_NUMBER=3
[2025-06-05 00:37:25] Starting ATLAS job with PandaID=6678593039
[2025-06-05 00:37:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:59:24]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:59:24]  is_tar=False
[2025-06-05 01:59:24]  lfn=log.45006595._055438.job.log.tgz.1
[2025-06-05 01:59:24]  mtime=0
[2025-06-05 01:59:24]  protocol_id=None
[2025-06-05 01:59:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 01:59:24]  replicas=None
[2025-06-05 01:59:24]  scope=mc23_13p6TeV
[2025-06-05 01:59:24]  status=None
[2025-06-05 01:59:24]  status_code=0
[2025-06-05 01:59:24]  storage_token=
[2025-06-05 01:59:24]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6678593039/log.45006595._055438.job.log.tgz.1
[2025-06-05 01:59:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/bb/log.45006595._055438.job.log.tgz.1
[2025-06-05 01:59:24]  workdir=None
[2025-06-05 01:59:24] ]
[2025-06-05 01:59:24] 2025-06-04 23:58:54,267 | INFO     | transferring file log.45006595._055438.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6678593039/log.45006595._055438.job.log.tgz.1 to /local/data/boinc/
[2025-06-05 01:59:24] 2025-06-04 23:58:54,267 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6678593039/log.45006595._055438.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0554
[2025-06-05 01:59:24] 2025-06-04 23:58:54,280 | INFO     | adding to output.list: log.45006595._055438.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/bb/log.45006595._055438.job.log.tg
[2025-06-05 01:59:24] 2025-06-04 23:58:54,280 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 01:59:24] 2025-06-04 23:58:54,280 | INFO     | summary of transferred files:
[2025-06-05 01:59:24] 2025-06-04 23:58:54,280 | INFO     |  -- lfn=log.45006595._055438.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 01:59:24] 2025-06-04 23:58:54,281 | INFO     | stage-out finished correctly
[2025-06-05 01:59:24] 2025-06-04 23:58:55,299 | INFO     | monitor loop #377: job 0:6678593039 is in state 'finished'
[2025-06-05 01:59:24] 2025-06-04 23:58:55,299 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:59:24] 2025-06-04 23:58:55,979 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 01:59:24] 2025-06-04 23:58:57,803 | INFO     | monitor loop #378: job 0:6678593039 is in state 'finished'
[2025-06-05 01:59:24] 2025-06-04 23:58:57,835 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:59:24] 2025-06-04 23:58:58,045 | INFO     | job 6678593039 has state=finished
[2025-06-05 01:59:24] 2025-06-04 23:58:58,046 | INFO     | preparing for final server update for job 6678593039 in state='finished'
[2025-06-05 01:59:24] 2025-06-04 23:58:58,047 | INFO     | this job has now completed (state=finished)
[2025-06-05 01:59:24] 2025-06-04 23:58:58,047 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 01:59:24] 2025-06-04 23:58:58,047 | INFO     | log transfer has been attempted: DONE
[2025-06-05 01:59:24] 2025-06-04 23:58:58,048 | INFO     | job 6678593039 has finished - writing final server update
[2025-06-05 01:59:24] 2025-06-04 23:58:58,048 | INFO     | total number of processed events: 400 (read)
[2025-06-05 01:59:24] 2025-06-04 23:58:58,051 | INFO     | executing command: lscpu
[2025-06-05 01:59:24] 2025-06-04 23:58:58,069 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 01:59:24] 2025-06-04 23:59:00,338 | INFO     | monitor loop #379: job 0:6678593039 is in state 'finished'
[2025-06-05 01:59:24] 2025-06-04 23:59:00,339 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:59:24] 2025-06-04 23:59:02,843 | INFO     | monitor loop #380: job 0:6678593039 is in state 'finished'
[2025-06-05 01:59:24] 2025-06-04 23:59:02,844 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:59:24] 2025-06-04 23:59:03,091 | INFO     | PID=3172744 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 01:59:24] 2025-06-04 23:59:05,289 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 01:59:24] 2025-06-04 23:59:05,289 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678593039/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 01:59:24] 2025-06-04 23:59:05,290 | INFO     | extracted standard info from prmon json
[2025-06-05 01:59:24] 2025-06-04 23:59:05,290 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:59:24] 2025-06-04 23:59:05,290 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:59:24] 2025-06-04 23:59:05,290 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:59:24] 2025-06-04 23:59:05,290 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:59:24] 2025-06-04 23:59:05,290 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:59:24] 2025-06-04 23:59:05,291 | INFO     | sum of square deviations: 120605052.0
[2025-06-05 01:59:24] 2025-06-04 23:59:05,291 | INFO     | sum of deviations: -10387154785.999998
[2025-06-05 01:59:24] 2025-06-04 23:59:05,291 | INFO     | mean x: 1749079186.0
[2025-06-05 01:59:24] 2025-06-04 23:59:05,291 | INFO     | mean y: 2451281.7671232875
[2025-06-05 01:59:24] 2025-06-04 23:59:05,291 | INFO     | -- intersect: 150642544185.61066
[2025-06-05 01:59:24] 2025-06-04 23:59:05,291 | INFO     | intersect: 150642544185.61066
[2025-06-05 01:59:24] 2025-06-04 23:59:05,291 | INFO     | chi2: 0.05327651604496494
[2025-06-05 01:59:24] 2025-06-04 23:59:05,291 | INFO     | -- intersect: 150642544185.61066
[2025-06-05 01:59:24] 2025-06-04 23:59:05,291 | INFO     | current memory leak: -86.13 B/s (using 73 data points, chi2=0.05)
[2025-06-05 01:59:24] 2025-06-04 23:59:05,291 | INFO     | ..............................
[2025-06-05 01:59:24] 2025-06-04 23:59:05,291 | INFO     | . Timing measurements:
[2025-06-05 01:59:24] 2025-06-04 23:59:05,291 | INFO     | . get job = 0 s
[2025-06-05 01:59:24] 2025-06-04 23:59:05,291 | INFO     | . initial setup = 1 s
[2025-06-05 01:59:24] 2025-06-04 23:59:05,291 | INFO     | . payload setup = 7 s
[2025-06-05 01:59:24] 2025-06-04 23:59:05,291 | INFO     | . stage-in = 0 s
[2025-06-05 01:59:24] 2025-06-04 23:59:05,291 | INFO     | . payload execution = 4848 s
[2025-06-05 01:59:24] 2025-06-04 23:59:05,291 | INFO     | . stage-out = 0 s
[2025-06-05 01:59:24] 2025-06-04 23:59:05,291 | INFO     | . log creation = 0 s
[2025-06-05 01:59:24] 2025-06-04 23:59:05,291 | INFO     | ..............................
[2025-06-05 01:59:24] 2025-06-04 23:59:05,323 | INFO     | 
[2025-06-05 01:59:24] 2025-06-04 23:59:05,323 | INFO     | job summary report
[2025-06-05 01:59:24] 2025-06-04 23:59:05,323 | INFO     | --------------------------------------------------
[2025-06-05 01:59:24] 2025-06-04 23:59:05,323 | INFO     | PanDA job id: 6678593039
[2025-06-05 01:59:24] 2025-06-04 23:59:05,324 | INFO     | task id: 45006595
[2025-06-05 01:59:24] 2025-06-04 23:59:05,324 | INFO     | errors: (none)
[2025-06-05 01:59:24] 2025-06-04 23:59:05,324 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:59:24] 2025-06-04 23:59:05,324 | INFO     | pilot state: finished 
[2025-06-05 01:59:24] 2025-06-04 23:59:05,324 | INFO     | transexitcode: 0
[2025-06-05 01:59:24] 2025-06-04 23:59:05,324 | INFO     | exeerrorcode: 0
[2025-06-05 01:59:24] 2025-06-04 23:59:05,324 | INFO     | exeerrordiag: 
[2025-06-05 01:59:24] 2025-06-04 23:59:05,324 | INFO     | exitcode: 0
[2025-06-05 01:59:24] 2025-06-04 23:59:05,324 | INFO     | exitmsg: OK
[2025-06-05 01:59:24] 2025-06-04 23:59:05,324 | INFO     | cpuconsumptiontime: 13945 s
[2025-06-05 01:59:24] 2025-06-04 23:59:05,324 | INFO     | nevents: 400
[2025-06-05 01:59:24] 2025-06-04 23:59:05,324 | INFO     | neventsw: 0
[2025-06-05 01:59:24] 2025-06-04 23:59:05,324 | INFO     | pid: 3179236
[2025-06-05 01:59:24] 2025-06-04 23:59:05,324 | INFO     | pgrp: 3179236
[2025-06-05 01:59:24] 2025-06-04 23:59:05,324 | INFO     | corecount: 3
[2025-06-05 01:59:24] 2025-06-04 23:59:05,324 | INFO     | event service: False
[2025-06-05 01:59:24] 2025-06-04 23:59:05,324 | INFO     | sizes: {0: 2397122, 1: 2397321, 4: 2397527, 11: 2397555, 4859: 2423754, 4860: 2432884, 4862: 2432884, 4871: 2433054}
[2025-06-05 01:59:24] 2025-06-04 23:59:05,324 | INFO     | --------------------------------------------------
[2025-06-05 01:59:24] 2025-06-04 23:59:05,324 | INFO     | 
[2025-06-05 01:59:24] 2025-06-04 23:59:05,324 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-05 01:59:24] 2025-06-04 23:59:05,336 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:59:24] 2025-06-04 23:59:05,336 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:59:24] 2025-06-04 23:59:05,336 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:59:24] 2025-06-04 23:59:05,336 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:59:24] 2025-06-04 23:59:05,336 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:59:24] 2025-06-04 23:59:05,337 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:59:24] 2025-06-04 23:59:05,337 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:59:24] 2025-06-04 23:59:05,337 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:59:24] 2025-06-04 23:59:05,337 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:59:24] 2025-06-04 23:59:05,337 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:59:24] 2025-06-04 23:59:05,337 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:59:24] 2025-06-04 23:59:05,337 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:59:24] 2025-06-04 23:59:05,337 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:59:24] 2025-06-04 23:59:05,337 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:59:24] 2025-06-04 23:59:05,337 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:59:24] 2025-06-04 23:59:05,337 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:59:24] 2025-06-04 23:59:05,337 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:59:24] 2025-06-04 23:59:05,337 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:59:24] 2025-06-04 23:59:05,337 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:59:24] 2025-06-04 23:59:05,337 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:59:24] 2025-06-04 23:59:05,337 | INFO     | job 6678593039 has completed (purged errors)
[2025-06-05 01:59:24] 2025-06-04 23:59:05,337 | INFO     | overall cleanup function is called
[2025-06-05 01:59:24] 2025-06-04 23:59:06,343 | INFO     | --- collectZombieJob: --- 10, [3179236]
[2025-06-05 01:59:24] 2025-06-04 23:59:06,344 | INFO     | zombie collector waiting for pid 3179236
[2025-06-05 01:59:24] 2025-06-04 23:59:06,344 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:59:24] 2025-06-04 23:59:06,344 | INFO     | collected zombie processes
[2025-06-05 01:59:24] 2025-06-04 23:59:06,344 | INFO     | will attempt to kill all subprocesses of pid=3179236
[2025-06-05 01:59:24] 2025-06-04 23:59:06,384 | INFO     | process IDs to be killed: [3179236] (in reverse order)
[2025-06-05 01:59:24] 2025-06-04 23:59:06,410 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:59:24] 2025-06-04 23:59:06,410 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:59:24] 2025-06-04 23:59:06,411 | INFO     | did not find any defunct processes belonging to 3179236
[2025-06-05 01:59:24] 2025-06-04 23:59:06,412 | INFO     | did not find any defunct processes belonging to 3179236
[2025-06-05 01:59:24] 2025-06-04 23:59:06,412 | INFO     | ready for new job
[2025-06-05 01:59:24] 2025-06-04 23:59:06,412 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:59:24] 2025-06-04 23:59:06,413 | INFO     | **************************************
[2025-06-05 01:59:24] 2025-06-04 23:59:06,413 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:59:24] 2025-06-04 23:59:06,413 | INFO     | **************************************
[2025-06-05 01:59:24] 2025-06-04 23:59:06,413 | INFO     | 
[2025-06-05 01:59:24] 2025-06-04 23:59:06,413 | INFO     | architecture information:
[2025-06-05 01:59:24] 2025-06-04 23:59:06,414 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:59:24] 2025-06-04 23:59:06,424 | INFO     | cat /etc/os-release:
[2025-06-05 01:59:24] NAME="CentOS Linux"
[2025-06-05 01:59:24] VERSION="7 (Core)"
[2025-06-05 01:59:24] ID="centos"
[2025-06-05 01:59:24] ID_LIKE="rhel fedora"
[2025-06-05 01:59:24] VERSION_ID="7"
[2025-06-05 01:59:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:59:24] ANSI_COLOR="0;31"
[2025-06-05 01:59:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:59:24] HOME_URL="https://www.centos.org/"
[2025-06-05 01:59:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:59:24] 
[2025-06-05 01:59:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:59:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:59:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:59:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:59:24] 
[2025-06-05 01:59:24] 2025-06-04 23:59:06,424 | INFO     | **************************************
[2025-06-05 01:59:24] 2025-06-04 23:59:06,928 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-05 01:59:24] 2025-06-04 23:59:06,941 | INFO     | sufficient remaining disk space (830726995968 B)
[2025-06-05 01:59:24] 2025-06-04 23:59:06,941 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:59:24] 2025-06-04 23:59:06,941 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:59:24] 2025-06-04 23:59:06,942 | INFO     | update_server=False
[2025-06-05 01:59:24] 2025-06-04 23:59:06,942 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:59:24] 2025-06-04 23:59:06,942 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:59:24] 2025-06-04 23:59:06,942 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:59:24] 2025-06-04 23:59:06,942 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:59:24] 2025-06-04 23:59:06,942 | INFO     | aborting loop
[2025-06-05 01:59:24] 2025-06-04 23:59:06,962 | INFO     | all data control threads have been joined
[2025-06-05 01:59:24] 2025-06-04 23:59:07,102 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:59:24] 2025-06-04 23:59:07,103 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:59:24] 2025-06-04 23:59:07,103 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:59:24] 2025-06-04 23:59:07,330 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:59:24] 2025-06-04 23:59:07,414 | INFO     | all payload control threads have been joined
[2025-06-05 01:59:24] 2025-06-04 23:59:07,947 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:59:24] 2025-06-04 23:59:07,948 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:59:24] 2025-06-04 23:59:07,949 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:59:24] 2025-06-04 23:59:07,968 | INFO     | [data] control thread has finished
[2025-06-05 01:59:24] 2025-06-04 23:59:08,010 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:59:24] 2025-06-04 23:59:08,035 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:59:24] 2025-06-04 23:59:08,415 | INFO     | [payload] control thread has finished
[2025-06-05 01:59:24] 2025-06-04 23:59:08,653 | INFO     | all job control threads have been joined
[2025-06-05 01:59:24] 2025-06-04 23:59:08,903 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:59:24] 2025-06-04 23:59:08,970 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:59:24] 2025-06-04 23:59:09,087 | INFO     | [job] validate thread has finished
[2025-06-05 01:59:24] 2025-06-04 23:59:09,232 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:59:24] 2025-06-04 23:59:09,336 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:59:24] 2025-06-04 23:59:09,421 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:59:24] 2025-06-04 23:59:09,659 | INFO     | [job] control thread has finished
[2025-06-05 01:59:24] 2025-06-04 23:59:10,949 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:59:24] 2025-06-04 23:59:17,966 | INFO     | job.realtimelogging is not enabled
[2025-06-05 01:59:24] 2025-06-04 23:59:18,968 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:59:24] 2025-06-04 23:59:19,336 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140464730412864)>', '<ExcThread(monitor, started 140464019732224)>']
[2025-06-05 01:59:24] 2025-06-04 23:59:20,172 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:59:24] 2025-06-04 23:59:20,173 | INFO     | [monitor] control thread has ended
[2025-06-05 01:59:24] 2025-06-04 23:59:24,362 | INFO     | all workflow threads have been joined
[2025-06-05 01:59:24] 2025-06-04 23:59:24,362 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:59:24] 2025-06-04 23:59:24,363 | INFO     | traces error code: 0
[2025-06-05 01:59:24] 2025-06-04 23:59:24,363 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:59:24] 2025-06-04 23:59:24,415 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:59:24] 2025-06-04 23:59:24,418 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:59:24] 2025-06-04 23:59:24,421 [wrapper] pilotpid: 3172744
[2025-06-05 01:59:24] 2025-06-04 23:59:24,424 [wrapper] Pilot exit status: 0
[2025-06-05 01:59:24] 2025-06-04 23:59:24,431 [wrapper] pandaids: 6678593039
[2025-06-05 01:59:24] 2025-06-04 23:59:24,447 [wrapper] cleanup supervisor_pilot 3191295 3172745
[2025-06-05 01:59:24] 2025-06-04 23:59:24,450 [wrapper] Test setup, not cleaning
[2025-06-05 01:59:24] 2025-06-04 23:59:24,453 [wrapper] apfmon messages muted
[2025-06-05 01:59:24] 2025-06-04 23:59:24,455 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:59:24] 2025-06-04 23:59:24,458 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:59:24]  *** Error codes and diagnostics ***
[2025-06-05 01:59:24]     "exeErrorCode": 0,
[2025-06-05 01:59:24]     "exeErrorDiag": "",
[2025-06-05 01:59:24]     "pilotErrorCode": 0,
[2025-06-05 01:59:24]     "pilotErrorDiag": "",
[2025-06-05 01:59:24]  *** Listing of results directory ***
[2025-06-05 01:59:24] total 386228
[2025-06-05 01:59:24] -rw-r--r-- 1 boinc boinc    495897 Jun  4 09:34 pilot3.tar.gz
[2025-06-05 01:59:24] -rwx------ 1 boinc boinc     37140 Jun  4 09:46 runpilot2-wrapper.sh
[2025-06-05 01:59:24] -rw-r--r-- 1 boinc boinc      5111 Jun  4 09:46 queuedata.json
[2025-06-05 01:59:24] -rw-r--r-- 1 boinc boinc       100 Jun  5 00:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:59:24] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 00:37 run_atlas
[2025-06-05 01:59:24] -rw-r--r-- 1 boinc boinc       105 Jun  5 00:37 job.xml
[2025-06-05 01:59:24] -rw-r--r-- 2 boinc boinc 215256619 Jun  5 00:37 EVNT.45006593._000890.pool.root.1
[2025-06-05 01:59:24] -rw-r--r-- 1 boinc boinc      6682 Jun  5 00:37 init_data.xml
[2025-06-05 01:59:24] drwxrwx--x 2 boinc boinc      4096 Jun  5 00:37 shared
[2025-06-05 01:59:24] -rw-r--r-- 2 boinc boinc    508886 Jun  5 00:37 input.tar.gz
[2025-06-05 01:59:24] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:37 start_atlas.sh
[2025-06-05 01:59:24] -rw-r--r-- 1 boinc boinc         0 Jun  5 00:37 boinc_lockfile
[2025-06-05 01:59:24] -rw-r--r-- 1 boinc boinc      2524 Jun  5 00:37 pandaJob.out
[2025-06-05 01:59:24] -rw------- 1 boinc boinc    987032 Jun  5 00:37 agis_schedconf.cvmfs.json
[2025-06-05 01:59:24] -rw------- 1 boinc boinc   1598969 Jun  5 00:37 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:59:24] drwx------ 4 boinc boinc      4096 Jun  5 00:37 pilot3
[2025-06-05 01:59:24] -rw------- 1 boinc boinc 175014459 Jun  5 01:58 HITS.45006595._055438.pool.root.1
[2025-06-05 01:59:24] -rw-r--r-- 1 boinc boinc       529 Jun  5 01:58 boinc_task_state.xml
[2025-06-05 01:59:24] -rw------- 1 boinc boinc      1013 Jun  5 01:58 memory_monitor_summary.json
[2025-06-05 01:59:24] -rw------- 1 boinc boinc    224316 Jun  5 01:58 log.45006595._055438.job.log.tgz.1
[2025-06-05 01:59:24] -rw------- 1 boinc boinc        95 Jun  5 01:59 pilot_heartbeat.json
[2025-06-05 01:59:24] -rw------- 1 boinc boinc      7656 Jun  5 01:59 heartbeat.json
[2025-06-05 01:59:24] -rw-r--r-- 1 boinc boinc      8192 Jun  5 01:59 boinc_mmap_file
[2025-06-05 01:59:24] -rw-r--r-- 1 boinc boinc        27 Jun  5 01:59 wrapper_checkpoint.txt
[2025-06-05 01:59:24] -rw------- 1 boinc boinc      4429 Jun  5 01:59 pilotlog.txt
[2025-06-05 01:59:24] -rw------- 1 boinc boinc    475133 Jun  5 01:59 log.45006595._055438.job.log.1
[2025-06-05 01:59:24] -rw------- 1 boinc boinc       357 Jun  5 01:59 output.list
[2025-06-05 01:59:24] -rw-r--r-- 1 boinc boinc       620 Jun  5 01:59 runtime_log
[2025-06-05 01:59:24] -rw------- 1 boinc boinc    716800 Jun  5 01:59 result.tar.gz
[2025-06-05 01:59:24] -rw-r--r-- 1 boinc boinc      8753 Jun  5 01:59 runtime_log.err
[2025-06-05 01:59:24] -rw------- 1 boinc boinc       662 Jun  5 01:59 AQrKDmH0xg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhjnKDm23gKan.diag
[2025-06-05 01:59:24] -rw-r--r-- 1 boinc boinc     21585 Jun  5 01:59 stderr.txt
[2025-06-05 01:59:24] HITS file was successfully produced:
[2025-06-05 01:59:24] -rw------- 1 boinc boinc 175014459 Jun  5 01:58 shared/HITS.pool.root.1
[2025-06-05 01:59:24]  *** Contents of shared directory: ***
[2025-06-05 01:59:24] total 382352
[2025-06-05 01:59:24] -rw-r--r-- 2 boinc boinc 215256619 Jun  5 00:37 ATLAS.root_0
[2025-06-05 01:59:24] -rw-r--r-- 2 boinc boinc    508886 Jun  5 00:37 input.tar.gz
[2025-06-05 01:59:24] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:37 start_atlas.sh
[2025-06-05 01:59:24] -rw------- 1 boinc boinc 175014459 Jun  5 01:58 HITS.pool.root.1
[2025-06-05 01:59:24] -rw------- 1 boinc boinc    716800 Jun  5 01:59 result.tar.gz
01:59:26 (3169104): run_atlas exited; CPU time 13967.445457
01:59:26 (3169104): called boinc_finish(0)

</stderr_txt>
]]>

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