Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:38:04 (28040): wrapper (7.7.26015): starting
01:38:04 (28040): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 01:38:04] Arguments: --nthreads 8
[2025-06-05 01:38:04] Threads: 8
[2025-06-05 01:38:04] Checking for CVMFS
[2025-06-05 01:38:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 01:38:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 01:38:05] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 01:38:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 01:38:05] 2.11.2.0 26121 33878 91264 146798 2 159 23499578 25165824 3632 130560 0 16783332 99.792 20178201 2092 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 01:38:05] CVMFS is ok
[2025-06-05 01:38:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 01:38:05] Checking for apptainer binary...
[2025-06-05 01:38:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 01:38:05] Running /usr/bin/apptainer --version
[2025-06-05 01:38:05] apptainer version 1.3.2-1.el7
[2025-06-05 01:38:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:38:06] cg-vwn308.simple-grid.lan
[2025-06-05 01:38:06] apptainer works
[2025-06-05 01:38:06] Set ATHENA_PROC_NUMBER=8
[2025-06-05 01:38:06] Set ATHENA_CORE_NUMBER=8
[2025-06-05 01:38:06] Starting ATLAS job with PandaID=6678390345
[2025-06-05 01:38:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 12:32:05]  *** The last 200 lines of the pilot log: ***
[2025-06-05 12:32:05] 2025-06-05 03:19:13,891 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6678390345/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 12:32:05] 2025-06-05 03:19:13,892 | INFO     | extracted standard info from prmon json
[2025-06-05 12:32:05] 2025-06-05 03:19:13,892 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 12:32:05] 2025-06-05 03:19:13,892 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 12:32:05] 2025-06-05 03:19:13,892 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 12:32:05] 2025-06-05 03:19:13,892 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 12:32:05] 2025-06-05 03:19:13,897 | INFO     | fitting pss+swap vs Time
[2025-06-05 12:32:05] 2025-06-05 03:19:13,897 | INFO     | sum of square deviations: 3081657780.0
[2025-06-05 12:32:05] 2025-06-05 03:19:13,899 | INFO     | sum of deviations: -17353802891.999996
[2025-06-05 12:32:05] 2025-06-05 03:19:13,899 | INFO     | mean x: 1749086888.0
[2025-06-05 12:32:05] 2025-06-05 03:19:13,899 | INFO     | mean y: 2492674.4604651164
[2025-06-05 12:32:05] 2025-06-05 03:19:13,899 | INFO     | -- intersect: 9852161671.559057
[2025-06-05 12:32:05] 2025-06-05 03:19:13,899 | INFO     | intersect: 9852161671.559057
[2025-06-05 12:32:05] 2025-06-05 03:19:13,900 | INFO     | chi2: 2.5355237765264573
[2025-06-05 12:32:05] 2025-06-05 03:19:13,900 | INFO     | sum of square deviations: 2871616632.5
[2025-06-05 12:32:05] 2025-06-05 03:19:13,905 | INFO     | sum of deviations: -3042876847.0000024
[2025-06-05 12:32:05] 2025-06-05 03:19:13,905 | INFO     | mean x: 1749086735.5
[2025-06-05 12:32:05] 2025-06-05 03:19:13,905 | INFO     | mean y: 2502870.038095238
[2025-06-05 12:32:05] 2025-06-05 03:19:13,906 | INFO     | -- intersect: 1855903310.2682612
[2025-06-05 12:32:05] 2025-06-05 03:19:13,906 | INFO     | intersect: 1855903310.2682612
[2025-06-05 12:32:05] 2025-06-05 03:19:13,906 | INFO     | chi2: 1.768353990736355
[2025-06-05 12:32:05] 2025-06-05 03:19:13,906 | INFO     | current chi2=1.768353990736355 (change=30.25685631081272 %)
[2025-06-05 12:32:05] 2025-06-05 03:19:13,906 | INFO     | sum of square deviations: 2671343110.0
[2025-06-05 12:32:05] 2025-06-05 03:19:13,908 | INFO     | sum of deviations: -3216704948.000007
[2025-06-05 12:32:05] 2025-06-05 03:19:13,908 | INFO     | mean x: 1749086583.0
[2025-06-05 12:32:05] 2025-06-05 03:19:13,908 | INFO     | mean y: 2502737.6634146343
[2025-06-05 12:32:05] 2025-06-05 03:19:13,908 | INFO     | -- intersect: 2108670022.9345777
[2025-06-05 12:32:05] 2025-06-05 03:19:13,908 | INFO     | intersect: 2108670022.9345777
[2025-06-05 12:32:05] 2025-06-05 03:19:13,909 | INFO     | chi2: 1.7674246806554077
[2025-06-05 12:32:05] 2025-06-05 03:19:13,909 | INFO     | current chi2=1.7674246806554077 (change=0.05255226531653595 %)
[2025-06-05 12:32:05] 2025-06-05 03:19:13,909 | INFO     | right removable region: 204
[2025-06-05 12:32:05] 2025-06-05 03:19:13,909 | INFO     | sum of square deviations: 2871616632.5
[2025-06-05 12:32:05] 2025-06-05 03:19:13,911 | INFO     | sum of deviations: -52029852735.49999
[2025-06-05 12:32:05] 2025-06-05 03:19:13,911 | INFO     | mean x: 1749087040.5
[2025-06-05 12:32:05] 2025-06-05 03:19:13,911 | INFO     | mean y: 2517607.566666667
[2025-06-05 12:32:05] 2025-06-05 03:19:13,911 | INFO     | -- intersect: 31693635463.90765
[2025-06-05 12:32:05] 2025-06-05 03:19:13,911 | INFO     | intersect: 31693635463.90765
[2025-06-05 12:32:05] 2025-06-05 03:19:13,912 | INFO     | chi2: 0.9814849538046209
[2025-06-05 12:32:05] 2025-06-05 03:19:13,912 | INFO     | current chi2=0.9814849538046209 (change=61.2906428687012 %)
[2025-06-05 12:32:05] 2025-06-05 03:19:13,912 | INFO     | sum of square deviations: 2671343110.0
[2025-06-05 12:32:05] 2025-06-05 03:19:13,914 | INFO     | sum of deviations: -50003227501.00001
[2025-06-05 12:32:05] 2025-06-05 03:19:13,914 | INFO     | mean x: 1749087193.0
[2025-06-05 12:32:05] 2025-06-05 03:19:13,914 | INFO     | mean y: 2516024.4292682926
[2025-06-05 12:32:05] 2025-06-05 03:19:13,914 | INFO     | -- intersect: 32742602650.989388
[2025-06-05 12:32:05] 2025-06-05 03:19:13,914 | INFO     | intersect: 32742602650.989388
[2025-06-05 12:32:05] 2025-06-05 03:19:13,915 | INFO     | chi2: 0.9677469506303854
[2025-06-05 12:32:05] 2025-06-05 03:19:13,915 | INFO     | current chi2=0.9677469506303854 (change=1.399716126159812 %)
[2025-06-05 12:32:05] 2025-06-05 03:19:13,915 | INFO     | left removable region: 20
[2025-06-05 12:32:05] 2025-06-05 03:19:13,920 | INFO     | sum of square deviations: 1931608310.0
[2025-06-05 12:32:05] 2025-06-05 03:19:13,922 | INFO     | sum of deviations: -22507896845.499996
[2025-06-05 12:32:05] 2025-06-05 03:19:13,922 | INFO     | mean x: 1749087162.5
[2025-06-05 12:32:05] 2025-06-05 03:19:13,922 | INFO     | mean y: 2516510.211956522
[2025-06-05 12:32:05] 2025-06-05 03:19:13,922 | INFO     | -- intersect: 20383601652.33287
[2025-06-05 12:32:05] 2025-06-05 03:19:13,922 | INFO     | intersect: 20383601652.33287
[2025-06-05 12:32:05] 2025-06-05 03:19:13,923 | INFO     | chi2: 0.1430109530712369
[2025-06-05 12:32:05] 2025-06-05 03:19:13,923 | INFO     | -- intersect: 20383601652.33287
[2025-06-05 12:32:05] 2025-06-05 03:19:13,923 | INFO     | current memory leak: -11.65 B/s (using 184 data points, chi2=0.14)
[2025-06-05 12:32:05] 2025-06-05 03:19:13,924 | INFO     | ..............................
[2025-06-05 12:32:05] 2025-06-05 03:19:13,924 | INFO     | . Timing measurements:
[2025-06-05 12:32:05] 2025-06-05 03:19:13,930 | INFO     | . get job = 0 s
[2025-06-05 12:32:05] 2025-06-05 03:19:13,931 | INFO     | . initial setup = 2 s
[2025-06-05 12:32:05] 2025-06-05 03:19:13,931 | INFO     | . payload setup = 13 s
[2025-06-05 12:32:05] 2025-06-05 03:19:13,931 | INFO     | . stage-in = 0 s
[2025-06-05 12:32:05] 2025-06-05 03:19:13,931 | INFO     | . payload execution = 13114 s
[2025-06-05 12:32:05] 2025-06-05 03:19:13,931 | INFO     | . stage-out = 3 s
[2025-06-05 12:32:05] 2025-06-05 03:19:13,931 | INFO     | . log creation = 1 s
[2025-06-05 12:32:05] 2025-06-05 03:19:13,931 | INFO     | ..............................
[2025-06-05 12:32:05] 2025-06-05 03:19:14,052 | INFO     | 
[2025-06-05 12:32:05] 2025-06-05 03:19:14,052 | INFO     | job summary report
[2025-06-05 12:32:05] 2025-06-05 03:19:14,052 | INFO     | --------------------------------------------------
[2025-06-05 12:32:05] 2025-06-05 03:19:14,052 | INFO     | PanDA job id: 6678390345
[2025-06-05 12:32:05] 2025-06-05 03:19:14,052 | INFO     | task id: 45006595
[2025-06-05 12:32:05] 2025-06-05 03:19:14,053 | INFO     | errors: (none)
[2025-06-05 12:32:05] 2025-06-05 03:19:14,053 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 12:32:05] 2025-06-05 03:19:14,053 | INFO     | pilot state: finished 
[2025-06-05 12:32:05] 2025-06-05 03:19:14,053 | INFO     | transexitcode: 0
[2025-06-05 12:32:05] 2025-06-05 03:19:14,053 | INFO     | exeerrorcode: 0
[2025-06-05 12:32:05] 2025-06-05 03:19:14,053 | INFO     | exeerrordiag: 
[2025-06-05 12:32:05] 2025-06-05 03:19:14,053 | INFO     | exitcode: 0
[2025-06-05 12:32:05] 2025-06-05 03:19:14,053 | INFO     | exitmsg: OK
[2025-06-05 12:32:05] 2025-06-05 03:19:14,053 | INFO     | cpuconsumptiontime: 49929 s
[2025-06-05 12:32:05] 2025-06-05 03:19:14,053 | INFO     | nevents: 400
[2025-06-05 12:32:05] 2025-06-05 03:19:14,053 | INFO     | neventsw: 0
[2025-06-05 12:32:05] 2025-06-05 03:19:14,053 | INFO     | pid: 7919
[2025-06-05 12:32:05] 2025-06-05 03:19:14,054 | INFO     | pgrp: 7919
[2025-06-05 12:32:05] 2025-06-05 03:19:14,054 | INFO     | corecount: 8
[2025-06-05 12:32:05] 2025-06-05 03:19:14,054 | INFO     | event service: False
[2025-06-05 12:32:05] 2025-06-05 03:19:14,054 | INFO     | sizes: {0: 2397171, 1: 2397370, 11: 2397576, 12: 2397604, 13132: 2427130, 13137: 2436255, 13227: 2436369}
[2025-06-05 12:32:05] 2025-06-05 03:19:14,054 | INFO     | --------------------------------------------------
[2025-06-05 12:32:05] 2025-06-05 03:19:14,054 | INFO     | 
[2025-06-05 12:32:05] 2025-06-05 03:19:14,054 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-05 12:32:05] 2025-06-05 03:19:14,370 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 12:32:05] 2025-06-05 03:19:14,371 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 12:32:05] 2025-06-05 03:19:14,371 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 12:32:05] 2025-06-05 03:19:14,371 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 12:32:05] 2025-06-05 03:19:14,371 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 12:32:05] 2025-06-05 03:19:14,371 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 12:32:05] 2025-06-05 03:19:14,371 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 12:32:05] 2025-06-05 03:19:14,371 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 12:32:05] 2025-06-05 03:19:14,371 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 12:32:05] 2025-06-05 03:19:14,372 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 12:32:05] 2025-06-05 03:19:14,372 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 12:32:05] 2025-06-05 03:19:14,372 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 12:32:05] 2025-06-05 03:19:14,372 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 12:32:05] 2025-06-05 03:19:14,372 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 12:32:05] 2025-06-05 03:19:14,372 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 12:32:05] 2025-06-05 03:19:14,372 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 12:32:05] 2025-06-05 03:19:14,372 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 12:32:05] 2025-06-05 03:19:14,372 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 12:32:05] 2025-06-05 03:19:14,372 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 12:32:05] 2025-06-05 03:19:14,372 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 12:32:05] 2025-06-05 03:19:14,373 | INFO     | job 6678390345 has completed (purged errors)
[2025-06-05 12:32:05] 2025-06-05 03:19:14,373 | INFO     | overall cleanup function is called
[2025-06-05 12:32:05] 2025-06-05 03:19:15,381 | INFO     | --- collectZombieJob: --- 10, [7919]
[2025-06-05 12:32:05] 2025-06-05 03:19:15,382 | INFO     | zombie collector waiting for pid 7919
[2025-06-05 12:32:05] 2025-06-05 03:19:15,382 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 12:32:05] 2025-06-05 03:19:15,382 | INFO     | collected zombie processes
[2025-06-05 12:32:05] 2025-06-05 03:19:15,382 | INFO     | will attempt to kill all subprocesses of pid=7919
[2025-06-05 12:32:05] 2025-06-05 03:19:15,476 | INFO     | process IDs to be killed: [7919] (in reverse order)
[2025-06-05 12:32:05] 2025-06-05 03:19:16,438 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 12:32:05] 2025-06-05 03:19:16,438 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 12:32:05] 2025-06-05 03:19:16,442 | INFO     | did not find any defunct processes belonging to 7919
[2025-06-05 12:32:05] 2025-06-05 03:19:16,445 | INFO     | did not find any defunct processes belonging to 7919
[2025-06-05 12:32:05] 2025-06-05 03:19:16,445 | INFO     | ready for new job
[2025-06-05 12:32:05] 2025-06-05 03:19:16,446 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 12:32:05] 2025-06-05 03:19:16,448 | INFO     | **************************************
[2025-06-05 12:32:05] 2025-06-05 03:19:16,448 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 12:32:05] 2025-06-05 03:19:16,448 | INFO     | **************************************
[2025-06-05 12:32:05] 2025-06-05 03:19:16,448 | INFO     | 
[2025-06-05 12:32:05] 2025-06-05 03:19:16,449 | INFO     | pilot is running in a VM
[2025-06-05 12:32:05] 2025-06-05 03:19:16,449 | INFO     | architecture information:
[2025-06-05 12:32:05] 2025-06-05 03:19:16,460 | INFO     | executing command: cat /etc/os-release
[2025-06-05 12:32:05] 2025-06-05 03:19:16,648 | INFO     | cat /etc/os-release:
[2025-06-05 12:32:05] NAME="CentOS Linux"
[2025-06-05 12:32:05] VERSION="7 (Core)"
[2025-06-05 12:32:05] ID="centos"
[2025-06-05 12:32:05] ID_LIKE="rhel fedora"
[2025-06-05 12:32:05] VERSION_ID="7"
[2025-06-05 12:32:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 12:32:05] ANSI_COLOR="0;31"
[2025-06-05 12:32:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 12:32:05] HOME_URL="https://www.centos.org/"
[2025-06-05 12:32:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 12:32:05] 
[2025-06-05 12:32:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 12:32:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 12:32:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 12:32:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 12:32:05] 
[2025-06-05 12:32:05] 2025-06-05 03:19:16,648 | INFO     | **************************************
[2025-06-05 12:32:05] 2025-06-05 03:19:17,152 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-05 12:32:05] 2025-06-05 03:19:17,453 | INFO     | sufficient remaining disk space (497223204864 B)
[2025-06-05 12:32:05] 2025-06-05 03:19:17,453 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 12:32:05] 2025-06-05 03:19:17,454 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 12:32:05] 2025-06-05 03:19:17,454 | INFO     | update_server=False
[2025-06-05 12:32:05] 2025-06-05 03:19:17,454 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 12:32:05] 2025-06-05 03:19:17,454 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 12:32:05] 2025-06-05 03:19:17,461 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:32:05] 2025-06-05 03:19:17,462 | INFO     | aborting loop
[2025-06-05 12:32:05] 2025-06-05 03:19:17,499 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 12:32:05] 2025-06-05 03:19:17,499 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 12:32:05] 2025-06-05 03:19:17,499 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 12:32:05] 2025-06-05 03:19:17,618 | INFO     | all data control threads have been joined
[2025-06-05 12:32:05] 2025-06-05 03:19:17,624 | INFO     | all job control threads have been joined
[2025-06-05 12:32:05] 2025-06-05 03:19:18,376 | INFO     | all payload control threads have been joined
[2025-06-05 12:32:05] 2025-06-05 03:19:18,460 | INFO     | [job] retrieve thread has finished
[2025-06-05 12:32:05] 2025-06-05 03:19:18,469 | INFO     | [job] job monitor thread has finished
[2025-06-05 12:32:05] 2025-06-05 03:19:18,474 | INFO     | [payload] validate_post thread has finished
[2025-06-05 12:32:05] 2025-06-05 03:19:18,624 | INFO     | [data] control thread has finished
[2025-06-05 12:32:05] 2025-06-05 03:19:18,630 | INFO     | [job] control thread has finished
[2025-06-05 12:32:05] 2025-06-05 03:19:18,793 | INFO     | [payload] failed_post thread has finished
[2025-06-05 12:32:05] 2025-06-05 03:19:19,066 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:32:05] 2025-06-05 03:19:19,133 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 12:32:05] 2025-06-05 03:19:19,165 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 12:32:05] 2025-06-05 03:19:19,338 | INFO     | [job] validate thread has finished
[2025-06-05 12:32:05] 2025-06-05 03:19:19,383 | INFO     | [payload] control thread has finished
[2025-06-05 12:32:05] 2025-06-05 03:19:19,461 | INFO     | [data] copytool_out thread has finished
[2025-06-05 12:32:05] 2025-06-05 03:19:19,603 | INFO     | [data] copytool_in thread has finished
[2025-06-05 12:32:05] 2025-06-05 03:19:19,610 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 12:32:05] 2025-06-05 03:19:19,628 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 12:32:05] 2025-06-05 03:19:20,072 | INFO     | [job] queue monitor thread has finished
[2025-06-05 12:32:05] 2025-06-05 03:19:20,479 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 12:32:05] 2025-06-05 03:19:24,487 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 12:32:05] 2025-06-05 03:19:24,590 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139765429978944)>', '<ExcThread(monitor, started 139764988626688)>']
[2025-06-05 12:32:05] 2025-06-05 03:19:25,546 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 12:32:05] 2025-06-05 03:19:25,547 | INFO     | [monitor] control thread has ended
[2025-06-05 12:32:05] 2025-06-05 03:19:29,616 | INFO     | all workflow threads have been joined
[2025-06-05 12:32:05] 2025-06-05 03:19:29,617 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 12:32:05] 2025-06-05 03:19:29,617 | INFO     | traces error code: 0
[2025-06-05 12:32:05] 2025-06-05 03:19:29,617 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 12:32:05] 2025-06-05 03:19:29,955 [wrapper] ==== pilot stdout END ====
[2025-06-05 12:32:05] 2025-06-05 03:19:30,016 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 12:32:05] 2025-06-05 03:19:30,125 [wrapper] pilotpid: 31740
[2025-06-05 12:32:05] 2025-06-05 03:19:30,214 [wrapper] Pilot exit status: 0
[2025-06-05 12:32:05] 2025-06-05 03:19:30,553 [wrapper] pandaids: 6678390345
[2025-06-05 12:32:05] 2025-06-05 03:19:31,302 [wrapper] cleanup supervisor_pilot 31223 31741
[2025-06-05 12:32:05] 2025-06-05 03:19:31,398 [wrapper] Test setup, not cleaning
[2025-06-05 12:32:05] 2025-06-05 03:19:31,504 [wrapper] apfmon messages muted
[2025-06-05 12:32:05] 2025-06-05 03:19:31,593 [wrapper] ==== wrapper stdout END ====
[2025-06-05 12:32:05] 2025-06-05 03:19:31,643 [wrapper] ==== wrapper stderr END ====
[2025-06-05 12:32:05]  *** Error codes and diagnostics ***
[2025-06-05 12:32:05]     "exeErrorCode": 0,
[2025-06-05 12:32:05]     "exeErrorDiag": "",
[2025-06-05 12:32:05]     "pilotErrorCode": 0,
[2025-06-05 12:32:05]     "pilotErrorDiag": "",
[2025-06-05 12:32:05]  *** Listing of results directory ***
[2025-06-05 12:32:05] total 394948
[2025-06-05 12:32:05] -rw-r--r--. 1 boinc boinc    495897 Jun  4 09:04 pilot3.tar.gz
[2025-06-05 12:32:05] -rwx------. 1 boinc boinc     37140 Jun  4 09:27 runpilot2-wrapper.sh
[2025-06-05 12:32:05] -rw-r--r--. 1 boinc boinc      5111 Jun  4 09:27 queuedata.json
[2025-06-05 12:32:05] -rw-r--r--. 1 boinc boinc       100 Jun  5 01:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 12:32:05] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 01:38 run_atlas
[2025-06-05 12:32:05] -rw-r--r--. 1 boinc boinc       105 Jun  5 01:38 job.xml
[2025-06-05 12:32:05] -rw-r--r--. 2 boinc boinc 218450694 Jun  5 01:38 EVNT.45006593._002192.pool.root.1
[2025-06-05 12:32:05] -rw-r--r--. 2 boinc boinc     15093 Jun  5 01:38 start_atlas.sh
[2025-06-05 12:32:05] drwxrwx--x. 2 boinc boinc        68 Jun  5 01:38 shared
[2025-06-05 12:32:05] -rw-r--r--. 2 boinc boinc    508884 Jun  5 01:38 input.tar.gz
[2025-06-05 12:32:05] -rw-r--r--. 1 boinc boinc      6391 Jun  5 01:38 init_data.xml
[2025-06-05 12:32:05] -rw-r--r--. 1 boinc boinc         0 Jun  5 01:38 boinc_lockfile
[2025-06-05 12:32:05] -rw-r--r--. 1 boinc boinc      2525 Jun  5 01:38 pandaJob.out
[2025-06-05 12:32:05] -rw-------. 1 boinc boinc    987117 Jun  5 01:38 agis_schedconf.cvmfs.json
[2025-06-05 12:32:05] drwx------. 4 boinc boinc      4096 Jun  5 01:38 pilot3
[2025-06-05 12:32:05] -rw-------. 1 boinc boinc 179088721 Jun  5 05:16 HITS.45006595._054796.pool.root.1
[2025-06-05 12:32:05] -rw-r--r--. 1 boinc boinc       531 Jun  5 05:16 boinc_task_state.xml
[2025-06-05 12:32:05] -rw-------. 1 boinc boinc      1015 Jun  5 05:17 memory_monitor_summary.json
[2025-06-05 12:32:05] -rw-------. 1 boinc boinc   1598969 Jun  5 05:17 agis_ddmendpoints.agis.ALL.json
[2025-06-05 12:32:05] -rw-------. 1 boinc boinc    389746 Jun  5 05:17 log.45006595._054796.job.log.tgz.1
[2025-06-05 12:32:05] -rw-------. 1 boinc boinc        95 Jun  5 05:18 pilot_heartbeat.json
[2025-06-05 12:32:05] -rw-------. 1 boinc boinc      7691 Jun  5 05:19 heartbeat.json
[2025-06-05 12:32:05] -rw-------. 1 boinc boinc      4416 Jun  5 05:19 pilotlog.txt
[2025-06-05 12:32:05] -rw-------. 1 boinc boinc   1144915 Jun  5 05:19 log.45006595._054796.job.log.1
[2025-06-05 12:32:05] -rw-------. 1 boinc boinc       357 Jun  5 05:19 output.list
[2025-06-05 12:32:05] -rw-r--r--. 1 boinc boinc       620 Jun  5 05:19 runtime_log
[2025-06-05 12:32:05] -rw-------. 1 boinc boinc   1556480 Jun  5 05:19 result.tar.gz
[2025-06-05 12:32:05] -rw-r--r--. 1 boinc boinc      8659 Jun  5 05:19 runtime_log.err
[2025-06-05 12:32:05] -rw-------. 1 boinc boinc       657 Jun  5 05:19 ND3MDmKixg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmQuaKDmzGM9gn.diag
[2025-06-05 12:32:05] -rw-r--r--. 1 boinc boinc      8192 Jun  5 12:32 boinc_mmap_file
[2025-06-05 12:32:05] -rw-r--r--. 1 boinc boinc        28 Jun  5 12:32 wrapper_checkpoint.txt
[2025-06-05 12:32:05] -rw-r--r--. 1 boinc boinc     20472 Jun  5 12:32 stderr.txt
[2025-06-05 12:32:05] HITS file was successfully produced:
[2025-06-05 12:32:05] -rw-------. 1 boinc boinc 179088721 Jun  5 05:16 shared/HITS.pool.root.1
[2025-06-05 12:32:05]  *** Contents of shared directory: ***
[2025-06-05 12:32:05] total 390260
[2025-06-05 12:32:05] -rw-r--r--. 2 boinc boinc 218450694 Jun  5 01:38 ATLAS.root_0
[2025-06-05 12:32:05] -rw-r--r--. 2 boinc boinc     15093 Jun  5 01:38 start_atlas.sh
[2025-06-05 12:32:05] -rw-r--r--. 2 boinc boinc    508884 Jun  5 01:38 input.tar.gz
[2025-06-05 12:32:05] -rw-------. 1 boinc boinc 179088721 Jun  5 05:16 HITS.pool.root.1
[2025-06-05 12:32:05] -rw-------. 1 boinc boinc   1556480 Jun  5 05:19 result.tar.gz
12:32:07 (28040): run_atlas exited; CPU time 50104.631860
12:32:07 (28040): called boinc_finish(0)

</stderr_txt>
]]>

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