Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
09:22:58 (3897120): wrapper (7.7.26015): starting
09:22:58 (3897120): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 09:22:58] Arguments: --nthreads 4
[2025-06-04 09:22:58] Threads: 4
[2025-06-04 09:22:58] Checking for CVMFS
[2025-06-04 09:22:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:22:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:22:59] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:22:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:22:59] 2.12.6.0 2389267 2681 53260 146781 2 187 3909964 6144000 6385 130560 0 14021628 99.998 630226 4707 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.30:3128 1
[2025-06-04 09:22:59] CVMFS is ok
[2025-06-04 09:22:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:22:59] Checking for apptainer binary...
[2025-06-04 09:22:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:22:59] Running /usr/bin/apptainer --version
[2025-06-04 09:22:59] apptainer version 1.3.4
[2025-06-04 09:22:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:22:59] Starfish-Cruncher
[2025-06-04 09:22:59] apptainer works
[2025-06-04 09:22:59] Set ATHENA_PROC_NUMBER=4
[2025-06-04 09:22:59] Set ATHENA_CORE_NUMBER=4
[2025-06-04 09:22:59] Starting ATLAS job with PandaID=6678363353
[2025-06-04 09:22:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:14:42]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:14:42] 2025-06-04 16:14:22,482 | INFO     | chi2: 1.3575909969351407
[2025-06-04 11:14:42] 2025-06-04 16:14:22,482 | INFO     | current chi2=1.3575909969351407 (change=-0.18882537578745914 %)
[2025-06-04 11:14:42] 2025-06-04 16:14:22,482 | INFO     | right removable region: 103
[2025-06-04 11:14:42] 2025-06-04 16:14:22,482 | INFO     | sum of square deviations: 348769330.0
[2025-06-04 11:14:42] 2025-06-04 16:14:22,482 | INFO     | sum of deviations: 4674674.000000048
[2025-06-04 11:14:42] 2025-06-04 16:14:22,482 | INFO     | mean x: 1749050457.5
[2025-06-04 11:14:42] 2025-06-04 16:14:22,482 | INFO     | mean y: 2304511.269230769
[2025-06-04 11:14:42] 2025-06-04 16:14:22,482 | INFO     | -- intersect: -21138607.13330606
[2025-06-04 11:14:42] 2025-06-04 16:14:22,482 | INFO     | intersect: -21138607.13330606
[2025-06-04 11:14:42] 2025-06-04 16:14:22,483 | INFO     | chi2: 0.0025465352544740186
[2025-06-04 11:14:42] 2025-06-04 16:14:22,483 | INFO     | current chi2=0.0025465352544740186 (change=99.81206830591852 %)
[2025-06-04 11:14:42] 2025-06-04 16:14:22,483 | INFO     | sum of square deviations: 300842850.0
[2025-06-04 11:14:42] 2025-06-04 16:14:22,483 | INFO     | sum of deviations: 417599533.99999994
[2025-06-04 11:14:42] 2025-06-04 16:14:22,483 | INFO     | mean x: 1749050610.0
[2025-06-04 11:14:42] 2025-06-04 16:14:22,483 | INFO     | mean y: 2303188.9494949495
[2025-06-04 11:14:42] 2025-06-04 16:14:22,483 | INFO     | -- intersect: -2425551485.603733
[2025-06-04 11:14:42] 2025-06-04 16:14:22,483 | INFO     | intersect: -2425551485.603733
[2025-06-04 11:14:42] 2025-06-04 16:14:22,484 | INFO     | chi2: 0.0017320825860715355
[2025-06-04 11:14:42] 2025-06-04 16:14:22,484 | INFO     | current chi2=0.0017320825860715355 (change=31.98277608651079 %)
[2025-06-04 11:14:42] 2025-06-04 16:14:22,484 | INFO     | sum of square deviations: 257521107.5
[2025-06-04 11:14:42] 2025-06-04 16:14:22,484 | INFO     | sum of deviations: 797071018.0
[2025-06-04 11:14:42] 2025-06-04 16:14:22,484 | INFO     | mean x: 1749050762.5
[2025-06-04 11:14:42] 2025-06-04 16:14:22,484 | INFO     | mean y: 2301877.489361702
[2025-06-04 11:14:42] 2025-06-04 16:14:22,484 | INFO     | -- intersect: -5411303575.413372
[2025-06-04 11:14:42] 2025-06-04 16:14:22,484 | INFO     | intersect: -5411303575.413372
[2025-06-04 11:14:42] 2025-06-04 16:14:22,485 | INFO     | chi2: 0.0001478758736358237
[2025-06-04 11:14:42] 2025-06-04 16:14:22,485 | INFO     | current chi2=0.0001478758736358237 (change=91.46253909455815 %)
[2025-06-04 11:14:42] 2025-06-04 16:14:22,485 | INFO     | sum of square deviations: 218571540.0
[2025-06-04 11:14:42] 2025-06-04 16:14:22,485 | INFO     | sum of deviations: 619403699.0000001
[2025-06-04 11:14:42] 2025-06-04 16:14:22,485 | INFO     | mean x: 1749050915.0
[2025-06-04 11:14:42] 2025-06-04 16:14:22,485 | INFO     | mean y: 2302570.202247191
[2025-06-04 11:14:42] 2025-06-04 16:14:22,485 | INFO     | -- intersect: -4954283298.618253
[2025-06-04 11:14:42] 2025-06-04 16:14:22,485 | INFO     | intersect: -4954283298.618253
[2025-06-04 11:14:42] 2025-06-04 16:14:22,486 | INFO     | chi2: 0.00012579004272748643
[2025-06-04 11:14:42] 2025-06-04 16:14:22,486 | INFO     | current chi2=0.00012579004272748643 (change=14.935384904456026 %)
[2025-06-04 11:14:42] 2025-06-04 16:14:22,486 | INFO     | left removable region: 40
[2025-06-04 11:14:42] 2025-06-04 16:14:22,486 | INFO     | sum of square deviations: 77515872.0
[2025-06-04 11:14:42] 2025-06-04 16:14:22,486 | INFO     | sum of deviations: 140791782.0
[2025-06-04 11:14:42] 2025-06-04 16:14:22,486 | INFO     | mean x: 1749051342.0
[2025-06-04 11:14:42] 2025-06-04 16:14:22,486 | INFO     | mean y: 2303865.603174603
[2025-06-04 11:14:42] 2025-06-04 16:14:22,486 | INFO     | -- intersect: -3174491400.915551
[2025-06-04 11:14:42] 2025-06-04 16:14:22,486 | INFO     | intersect: -3174491400.915551
[2025-06-04 11:14:42] 2025-06-04 16:14:22,486 | INFO     | chi2: 8.948967967697918e-05
[2025-06-04 11:14:42] 2025-06-04 16:14:22,486 | INFO     | -- intersect: -3174491400.915551
[2025-06-04 11:14:42] 2025-06-04 16:14:22,487 | INFO     | current memory leak: 1.82 B/s (using 63 data points, chi2=0.00)
[2025-06-04 11:14:42] 2025-06-04 16:14:22,487 | INFO     | ..............................
[2025-06-04 11:14:42] 2025-06-04 16:14:22,487 | INFO     | . Timing measurements:
[2025-06-04 11:14:42] 2025-06-04 16:14:22,487 | INFO     | . get job = 0 s
[2025-06-04 11:14:42] 2025-06-04 16:14:22,487 | INFO     | . initial setup = 2 s
[2025-06-04 11:14:42] 2025-06-04 16:14:22,487 | INFO     | . payload setup = 4 s
[2025-06-04 11:14:42] 2025-06-04 16:14:22,487 | INFO     | . stage-in = 0 s
[2025-06-04 11:14:42] 2025-06-04 16:14:22,487 | INFO     | . payload execution = 6646 s
[2025-06-04 11:14:42] 2025-06-04 16:14:22,487 | INFO     | . stage-out = 0 s
[2025-06-04 11:14:42] 2025-06-04 16:14:22,487 | INFO     | . log creation = 0 s
[2025-06-04 11:14:42] 2025-06-04 16:14:22,487 | INFO     | ..............................
[2025-06-04 11:14:42] 2025-06-04 16:14:22,631 | INFO     | 
[2025-06-04 11:14:42] 2025-06-04 16:14:22,631 | INFO     | job summary report
[2025-06-04 11:14:42] 2025-06-04 16:14:22,631 | INFO     | --------------------------------------------------
[2025-06-04 11:14:42] 2025-06-04 16:14:22,631 | INFO     | PanDA job id: 6678363353
[2025-06-04 11:14:42] 2025-06-04 16:14:22,631 | INFO     | task id: 45006595
[2025-06-04 11:14:42] 2025-06-04 16:14:22,631 | INFO     | errors: (none)
[2025-06-04 11:14:42] 2025-06-04 16:14:22,631 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:14:42] 2025-06-04 16:14:22,631 | INFO     | pilot state: finished 
[2025-06-04 11:14:42] 2025-06-04 16:14:22,631 | INFO     | transexitcode: 0
[2025-06-04 11:14:42] 2025-06-04 16:14:22,631 | INFO     | exeerrorcode: 0
[2025-06-04 11:14:42] 2025-06-04 16:14:22,632 | INFO     | exeerrordiag: 
[2025-06-04 11:14:42] 2025-06-04 16:14:22,632 | INFO     | exitcode: 0
[2025-06-04 11:14:42] 2025-06-04 16:14:22,632 | INFO     | exitmsg: OK
[2025-06-04 11:14:42] 2025-06-04 16:14:22,632 | INFO     | cpuconsumptiontime: 25469 s
[2025-06-04 11:14:42] 2025-06-04 16:14:22,632 | INFO     | nevents: 400
[2025-06-04 11:14:42] 2025-06-04 16:14:22,632 | INFO     | neventsw: 0
[2025-06-04 11:14:42] 2025-06-04 16:14:22,632 | INFO     | pid: 3907713
[2025-06-04 11:14:42] 2025-06-04 16:14:22,632 | INFO     | pgrp: 3907713
[2025-06-04 11:14:42] 2025-06-04 16:14:22,632 | INFO     | corecount: 4
[2025-06-04 11:14:42] 2025-06-04 16:14:22,632 | INFO     | event service: False
[2025-06-04 11:14:42] 2025-06-04 16:14:22,632 | INFO     | sizes: {0: 2397349, 3: 2397555, 11: 2397583, 6654: 2424625, 6656: 2433636, 6660: 2433750}
[2025-06-04 11:14:42] 2025-06-04 16:14:22,632 | INFO     | --------------------------------------------------
[2025-06-04 11:14:42] 2025-06-04 16:14:22,632 | INFO     | 
[2025-06-04 11:14:42] 2025-06-04 16:14:22,632 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/7
[2025-06-04 11:14:42] 2025-06-04 16:14:22,649 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:14:42] 2025-06-04 16:14:22,649 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:14:42] 2025-06-04 16:14:22,650 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:14:42] 2025-06-04 16:14:22,650 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:14:42] 2025-06-04 16:14:22,650 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:14:42] 2025-06-04 16:14:22,650 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:14:42] 2025-06-04 16:14:22,650 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:14:42] 2025-06-04 16:14:22,650 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:14:42] 2025-06-04 16:14:22,650 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:14:42] 2025-06-04 16:14:22,650 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:14:42] 2025-06-04 16:14:22,650 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:14:42] 2025-06-04 16:14:22,650 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:14:42] 2025-06-04 16:14:22,650 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:14:42] 2025-06-04 16:14:22,650 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:14:42] 2025-06-04 16:14:22,650 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:14:42] 2025-06-04 16:14:22,650 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:14:42] 2025-06-04 16:14:22,650 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:14:42] 2025-06-04 16:14:22,651 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:14:42] 2025-06-04 16:14:22,651 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:14:42] 2025-06-04 16:14:22,651 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:14:42] 2025-06-04 16:14:22,651 | INFO     | job 6678363353 has completed (purged errors)
[2025-06-04 11:14:42] 2025-06-04 16:14:22,651 | INFO     | overall cleanup function is called
[2025-06-04 11:14:42] 2025-06-04 16:14:23,155 | WARNING  | process 3907713 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 11:14:42] 2025-06-04 16:14:23,274 | INFO     | using path: /var/lib/boinc-client/slots/7/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:14:42] 2025-06-04 16:14:23,275 | INFO     | using path: /var/lib/boinc-client/slots/7/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:14:42] 2025-06-04 16:14:23,276 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc-client/slots/7/PanDA_Pilot-6678363353/payload.stdout) since it has not been created yet
[2025-06-04 11:14:42] 2025-06-04 16:14:23,276 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2025-06-04 11:14:42] 2025-06-04 16:14:23,290 | INFO     | sufficient remaining disk space (1814908895232 B)
[2025-06-04 11:14:42] 2025-06-04 16:14:23,290 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-06-04 11:14:42] 2025-06-04 16:14:23,290 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/7/PanDA_Pilot-6678363353/HITS.45006595._053393.pool.root.1 since it does not exist
[2025-06-04 11:14:42] 2025-06-04 16:14:23,459 | INFO     | number of running child processes to parent process 3907713: 1
[2025-06-04 11:14:42] 2025-06-04 16:14:23,459 | INFO     | maximum number of monitored processes: 6
[2025-06-04 11:14:42] 2025-06-04 16:14:23,459 | INFO     | aborting job monitoring since job object (job id=6678363353) has expired
[2025-06-04 11:14:42] 2025-06-04 16:14:23,654 | INFO     | --- collectZombieJob: --- 10, [3907713]
[2025-06-04 11:14:42] 2025-06-04 16:14:23,655 | INFO     | zombie collector waiting for pid 3907713
[2025-06-04 11:14:42] 2025-06-04 16:14:23,655 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:14:42] 2025-06-04 16:14:23,655 | INFO     | collected zombie processes
[2025-06-04 11:14:42] 2025-06-04 16:14:23,655 | INFO     | will attempt to kill all subprocesses of pid=3907713
[2025-06-04 11:14:42] 2025-06-04 16:14:23,813 | INFO     | process IDs to be killed: [3907713] (in reverse order)
[2025-06-04 11:14:42] 2025-06-04 16:14:23,873 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:14:42] 2025-06-04 16:14:23,873 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:14:42] 2025-06-04 16:14:23,878 | INFO     | did not find any defunct processes belonging to 3907713
[2025-06-04 11:14:42] 2025-06-04 16:14:23,882 | INFO     | did not find any defunct processes belonging to 3907713
[2025-06-04 11:14:42] 2025-06-04 16:14:23,883 | INFO     | ready for new job
[2025-06-04 11:14:42] 2025-06-04 16:14:23,883 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:14:42] 2025-06-04 16:14:23,884 | INFO     | **************************************
[2025-06-04 11:14:42] 2025-06-04 16:14:23,884 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:14:42] 2025-06-04 16:14:23,884 | INFO     | **************************************
[2025-06-04 11:14:42] 2025-06-04 16:14:23,884 | INFO     | 
[2025-06-04 11:14:42] 2025-06-04 16:14:23,886 | INFO     | architecture information:
[2025-06-04 11:14:42] 2025-06-04 16:14:23,886 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:14:42] 2025-06-04 16:14:23,899 | INFO     | cat /etc/os-release:
[2025-06-04 11:14:42] NAME="CentOS Linux"
[2025-06-04 11:14:42] VERSION="7 (Core)"
[2025-06-04 11:14:42] ID="centos"
[2025-06-04 11:14:42] ID_LIKE="rhel fedora"
[2025-06-04 11:14:42] VERSION_ID="7"
[2025-06-04 11:14:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:14:42] ANSI_COLOR="0;31"
[2025-06-04 11:14:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:14:42] HOME_URL="https://www.centos.org/"
[2025-06-04 11:14:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:14:42] 
[2025-06-04 11:14:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:14:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:14:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:14:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:14:42] 
[2025-06-04 11:14:42] 2025-06-04 16:14:23,899 | INFO     | **************************************
[2025-06-04 11:14:42] 2025-06-04 16:14:24,402 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2025-06-04 11:14:42] 2025-06-04 16:14:24,416 | INFO     | sufficient remaining disk space (1814910992384 B)
[2025-06-04 11:14:42] 2025-06-04 16:14:24,416 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:14:42] 2025-06-04 16:14:24,417 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:14:42] 2025-06-04 16:14:24,417 | INFO     | update_server=False
[2025-06-04 11:14:42] 2025-06-04 16:14:24,417 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:14:42] 2025-06-04 16:14:24,417 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:14:42] 2025-06-04 16:14:24,417 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:14:42] 2025-06-04 16:14:24,417 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:14:42] 2025-06-04 16:14:24,417 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:14:42] 2025-06-04 16:14:24,417 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:14:42] 2025-06-04 16:14:24,418 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:14:42] 2025-06-04 16:14:24,418 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:14:42] 2025-06-04 16:14:24,418 | INFO     | will abort loop
[2025-06-04 11:14:42] 2025-06-04 16:14:24,474 | INFO     | all job control threads have been joined
[2025-06-04 11:14:42] 2025-06-04 16:14:24,543 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:14:42] 2025-06-04 16:14:24,823 | INFO     | all data control threads have been joined
[2025-06-04 11:14:42] 2025-06-04 16:14:25,255 | INFO     | all payload control threads have been joined
[2025-06-04 11:14:42] 2025-06-04 16:14:25,422 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:14:42] 2025-06-04 16:14:25,422 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:14:42] 2025-06-04 16:14:25,423 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:14:42] 2025-06-04 16:14:25,477 | INFO     | [job] control thread has finished
[2025-06-04 11:14:42] 2025-06-04 16:14:25,656 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:14:42] 2025-06-04 16:14:25,744 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:14:42] 2025-06-04 16:14:25,818 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:14:42] 2025-06-04 16:14:25,828 | INFO     | [data] control thread has finished
[2025-06-04 11:14:42] 2025-06-04 16:14:26,260 | INFO     | [payload] control thread has finished
[2025-06-04 11:14:42] 2025-06-04 16:14:26,423 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:14:42] 2025-06-04 16:14:26,662 | INFO     | [job] validate thread has finished
[2025-06-04 11:14:42] 2025-06-04 16:14:26,671 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:14:42] 2025-06-04 16:14:26,758 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:14:42] 2025-06-04 16:14:26,914 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:14:42] 2025-06-04 16:14:28,549 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:14:42] 2025-06-04 16:14:35,056 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:14:42] 2025-06-04 16:14:36,061 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:14:42] 2025-06-04 16:14:36,942 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130620057057088)>', '<ExcThread(monitor, started 130619617052416)>']
[2025-06-04 11:14:42] 2025-06-04 16:14:37,479 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:14:42] 2025-06-04 16:14:37,479 | INFO     | [monitor] control thread has ended
[2025-06-04 11:14:42] 2025-06-04 16:14:41,967 | INFO     | all workflow threads have been joined
[2025-06-04 11:14:42] 2025-06-04 16:14:41,967 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:14:42] 2025-06-04 16:14:41,967 | INFO     | traces error code: 0
[2025-06-04 11:14:42] 2025-06-04 16:14:41,967 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:14:42] 2025-06-04 16:14:42,046 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:14:42] 2025-06-04 16:14:42,049 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:14:42] 2025-06-04 16:14:42,051 [wrapper] pilotpid: 3900911
[2025-06-04 11:14:42] 2025-06-04 16:14:42,053 [wrapper] Pilot exit status: 0
[2025-06-04 11:14:42] 2025-06-04 16:14:42,061 [wrapper] pandaids: 6678363353
[2025-06-04 11:14:42] 2025-06-04 16:14:42,099 [wrapper] cleanup supervisor_pilot 4092167 3900912
[2025-06-04 11:14:42] 2025-06-04 16:14:42,101 [wrapper] Test setup, not cleaning
[2025-06-04 11:14:42] 2025-06-04 16:14:42,103 [wrapper] apfmon messages muted
[2025-06-04 11:14:42] 2025-06-04 16:14:42,105 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:14:42] 2025-06-04 16:14:42,108 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:14:42]  *** Error codes and diagnostics ***
[2025-06-04 11:14:42]     "exeErrorCode": 0,
[2025-06-04 11:14:42]     "exeErrorDiag": "",
[2025-06-04 11:14:42]     "pilotErrorCode": 0,
[2025-06-04 11:14:42]     "pilotErrorDiag": "",
[2025-06-04 11:14:42]  *** Listing of results directory ***
[2025-06-04 11:14:42] total 382240
[2025-06-04 11:14:42] -rw-r--r-- 1 boinc boinc    495897 Jun  3 23:58 pilot3.tar.gz
[2025-06-04 11:14:42] -rw-r--r-- 1 boinc boinc      5111 Jun  4 00:22 queuedata.json
[2025-06-04 11:14:42] -rwx------ 1 boinc boinc     37140 Jun  4 00:23 runpilot2-wrapper.sh
[2025-06-04 11:14:42] -rw-r--r-- 1 boinc boinc       100 Jun  4 09:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:14:42] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 09:22 run_atlas
[2025-06-04 11:14:42] -rw-r--r-- 1 boinc boinc       105 Jun  4 09:22 job.xml
[2025-06-04 11:14:42] -rw-r--r-- 1 boinc boinc      9628 Jun  4 09:22 init_data.xml
[2025-06-04 11:14:42] -rw-r--r-- 2 boinc boinc 215042559 Jun  4 09:22 EVNT.45006593._002137.pool.root.1
[2025-06-04 11:14:42] -rw-r--r-- 2 boinc boinc     15093 Jun  4 09:22 start_atlas.sh
[2025-06-04 11:14:42] drwxrwx--x 2 boinc boinc      4096 Jun  4 09:22 shared
[2025-06-04 11:14:42] -rw-r--r-- 2 boinc boinc    508882 Jun  4 09:22 input.tar.gz
[2025-06-04 11:14:42] -rw-r--r-- 1 boinc boinc         0 Jun  4 09:22 boinc_lockfile
[2025-06-04 11:14:42] -rw-r--r-- 1 boinc boinc      2525 Jun  4 09:22 pandaJob.out
[2025-06-04 11:14:42] -rw------- 1 boinc boinc    986819 Jun  4 09:23 agis_schedconf.cvmfs.json
[2025-06-04 11:14:42] -rw------- 1 boinc boinc   1598969 Jun  4 09:23 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:14:42] drwx------ 4 boinc boinc      4096 Jun  4 09:23 pilot3
[2025-06-04 11:14:42] -rw------- 1 boinc boinc 170726532 Jun  4 11:13 HITS.45006595._053393.pool.root.1
[2025-06-04 11:14:42] -rw------- 1 boinc boinc        95 Jun  4 11:13 pilot_heartbeat.json
[2025-06-04 11:14:42] -rw-r--r-- 1 boinc boinc       529 Jun  4 11:14 boinc_task_state.xml
[2025-06-04 11:14:42] -rw------- 1 boinc boinc      1022 Jun  4 11:14 memory_monitor_summary.json
[2025-06-04 11:14:42] -rw------- 1 boinc boinc    256757 Jun  4 11:14 log.45006595._053393.job.log.tgz.1
[2025-06-04 11:14:42] -rw------- 1 boinc boinc      7663 Jun  4 11:14 heartbeat.json
[2025-06-04 11:14:42] -rw-r--r-- 1 boinc boinc      8192 Jun  4 11:14 boinc_mmap_file
[2025-06-04 11:14:42] -rw-r--r-- 1 boinc boinc        27 Jun  4 11:14 wrapper_checkpoint.txt
[2025-06-04 11:14:42] -rw------- 1 boinc boinc      4559 Jun  4 11:14 pilotlog.txt
[2025-06-04 11:14:42] -rw------- 1 boinc boinc    647331 Jun  4 11:14 log.45006595._053393.job.log.1
[2025-06-04 11:14:42] -rw------- 1 boinc boinc       357 Jun  4 11:14 output.list
[2025-06-04 11:14:42] -rw-r--r-- 1 boinc boinc       620 Jun  4 11:14 runtime_log
[2025-06-04 11:14:42] -rw------- 1 boinc boinc    921600 Jun  4 11:14 result.tar.gz
[2025-06-04 11:14:42] -rw-r--r-- 1 boinc boinc      8761 Jun  4 11:14 runtime_log.err
[2025-06-04 11:14:42] -rw------- 1 boinc boinc       653 Jun  4 11:14 g6gLDmnlvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKOnKDmGVmmyn.diag
[2025-06-04 11:14:42] -rw-r--r-- 1 boinc boinc     21045 Jun  4 11:14 stderr.txt
[2025-06-04 11:14:42] HITS file was successfully produced:
[2025-06-04 11:14:42] -rw------- 1 boinc boinc 170726532 Jun  4 11:13 shared/HITS.pool.root.1
[2025-06-04 11:14:42]  *** Contents of shared directory: ***
[2025-06-04 11:14:42] total 378156
[2025-06-04 11:14:42] -rw-r--r-- 2 boinc boinc 215042559 Jun  4 09:22 ATLAS.root_0
[2025-06-04 11:14:42] -rw-r--r-- 2 boinc boinc     15093 Jun  4 09:22 start_atlas.sh
[2025-06-04 11:14:42] -rw-r--r-- 2 boinc boinc    508882 Jun  4 09:22 input.tar.gz
[2025-06-04 11:14:42] -rw------- 1 boinc boinc 170726532 Jun  4 11:13 HITS.pool.root.1
[2025-06-04 11:14:42] -rw------- 1 boinc boinc    921600 Jun  4 11:14 result.tar.gz
11:14:43 (3897120): run_atlas exited; CPU time 25569.089431
11:14:43 (3897120): called boinc_finish(0)

</stderr_txt>
]]>

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