Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:30:15 (4042862): wrapper (7.7.26015): starting
08:30:15 (4042862): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:30:15] Arguments: --nthreads 8
[2025-06-04 08:30:15] Threads: 8
[2025-06-04 08:30:15] Checking for CVMFS
[2025-06-04 08:30:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:30:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:30:15] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:30:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:30:16] 2.12.6.0 9719 37056 452884 146780 2 436 26237640 32935936 11810 16776704 1 152369944 99.546 186778066 25016 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:30:16] CVMFS is ok
[2025-06-04 08:30:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:30:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:30:16] Further information can be found at the LHC@home message board.
[2025-06-04 08:30:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:30:16] Checking for apptainer binary...
[2025-06-04 08:30:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:30:16] Running /usr/bin/apptainer --version
[2025-06-04 08:30:16] apptainer version 1.4.1-1.el9
[2025-06-04 08:30:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:30:16] c7-13-32.aglt2.org
[2025-06-04 08:30:16] apptainer works
[2025-06-04 08:30:16] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:30:16] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:30:16] Starting ATLAS job with PandaID=6678726546
[2025-06-04 08:30:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:29:39]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:29:39]  protocol_id=None
[2025-06-04 09:29:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:29:39]  replicas=None
[2025-06-04 09:29:39]  scope=mc23_13p6TeV
[2025-06-04 09:29:39]  status=None
[2025-06-04 09:29:39]  status_code=0
[2025-06-04 09:29:39]  storage_token=
[2025-06-04 09:29:39]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678726546/log.45006595._055523.job.log.tgz.1
[2025-06-04 09:29:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/b4/log.45006595._055523.job.log.tgz.1
[2025-06-04 09:29:39]  workdir=None
[2025-06-04 09:29:39] ]
[2025-06-04 09:29:39] 2025-06-04 13:29:16,302 | INFO     | transferring file log.45006595._055523.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678726546/log.45006595._055523.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:29:39] 2025-06-04 13:29:16,302 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678726546/log.45006595._055523.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._055523.job
[2025-06-04 09:29:39] 2025-06-04 13:29:16,327 | INFO     | adding to output.list: log.45006595._055523.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/b4/log.45006595._055523.job.log.tg
[2025-06-04 09:29:39] 2025-06-04 13:29:16,327 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:29:39] 2025-06-04 13:29:16,328 | INFO     | summary of transferred files:
[2025-06-04 09:29:39] 2025-06-04 13:29:16,328 | INFO     |  -- lfn=log.45006595._055523.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:29:39] 2025-06-04 13:29:16,328 | INFO     | stage-out finished correctly
[2025-06-04 09:29:39] 2025-06-04 13:29:17,401 | WARNING  | process 4058589 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 09:29:39] 2025-06-04 13:29:17,402 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678726546/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:29:39] 2025-06-04 13:29:17,669 | INFO     | number of running child processes to parent process 4058589: 1
[2025-06-04 09:29:39] 2025-06-04 13:29:17,669 | INFO     | maximum number of monitored processes: 6
[2025-06-04 09:29:39] 2025-06-04 13:29:18,363 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:29:39] 2025-06-04 13:29:20,172 | INFO     | monitor loop #264: job 0:6678726546 is in state 'finished'
[2025-06-04 09:29:39] 2025-06-04 13:29:20,173 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:29:39] 2025-06-04 13:29:20,964 | INFO     | job 6678726546 has state=finished
[2025-06-04 09:29:39] 2025-06-04 13:29:20,964 | INFO     | preparing for final server update for job 6678726546 in state='finished'
[2025-06-04 09:29:39] 2025-06-04 13:29:20,964 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:29:39] 2025-06-04 13:29:20,964 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:29:39] 2025-06-04 13:29:20,964 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:29:39] 2025-06-04 13:29:20,965 | INFO     | job 6678726546 has finished - writing final server update
[2025-06-04 09:29:39] 2025-06-04 13:29:20,965 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:29:39] 2025-06-04 13:29:20,983 | INFO     | executing command: lscpu
[2025-06-04 09:29:39] 2025-06-04 13:29:21,052 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:29:39] 2025-06-04 13:29:22,676 | INFO     | monitor loop #265: job 0:6678726546 is in state 'finished'
[2025-06-04 09:29:39] 2025-06-04 13:29:22,676 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:29:39] 2025-06-04 13:29:25,179 | INFO     | monitor loop #266: job 0:6678726546 is in state 'finished'
[2025-06-04 09:29:39] 2025-06-04 13:29:25,180 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:29:39] 2025-06-04 13:29:25,586 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 09:29:39] 2025-06-04 13:29:25,587 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678726546/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:29:39] 2025-06-04 13:29:25,588 | INFO     | extracted standard info from prmon json
[2025-06-04 09:29:39] 2025-06-04 13:29:25,588 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:29:39] 2025-06-04 13:29:25,588 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:29:39] 2025-06-04 13:29:25,588 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:29:39] 2025-06-04 13:29:25,588 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:29:39] 2025-06-04 13:29:25,589 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:29:39] 2025-06-04 13:29:25,589 | INFO     | sum of square deviations: 41117050.0
[2025-06-04 09:29:39] 2025-06-04 13:29:25,589 | INFO     | sum of deviations: 1541699603.999998
[2025-06-04 09:29:39] 2025-06-04 13:29:25,589 | INFO     | mean x: 1749042082.0
[2025-06-04 09:29:39] 2025-06-04 13:29:25,589 | INFO     | mean y: 2382713.274509804
[2025-06-04 09:29:39] 2025-06-04 13:29:25,589 | INFO     | -- intersect: -65578622859.80848
[2025-06-04 09:29:39] 2025-06-04 13:29:25,589 | INFO     | intersect: -65578622859.80848
[2025-06-04 09:29:39] 2025-06-04 13:29:25,589 | INFO     | chi2: 0.80514310029282
[2025-06-04 09:29:39] 2025-06-04 13:29:25,590 | INFO     | -- intersect: -65578622859.80848
[2025-06-04 09:29:39] 2025-06-04 13:29:25,590 | INFO     | current memory leak: 37.50 B/s (using 51 data points, chi2=0.81)
[2025-06-04 09:29:39] 2025-06-04 13:29:25,590 | INFO     | ..............................
[2025-06-04 09:29:39] 2025-06-04 13:29:25,590 | INFO     | . Timing measurements:
[2025-06-04 09:29:39] 2025-06-04 13:29:25,590 | INFO     | . get job = 0 s
[2025-06-04 09:29:39] 2025-06-04 13:29:25,590 | INFO     | . initial setup = 2 s
[2025-06-04 09:29:39] 2025-06-04 13:29:25,590 | INFO     | . payload setup = 6 s
[2025-06-04 09:29:39] 2025-06-04 13:29:25,590 | INFO     | . stage-in = 0 s
[2025-06-04 09:29:39] 2025-06-04 13:29:25,590 | INFO     | . payload execution = 3504 s
[2025-06-04 09:29:39] 2025-06-04 13:29:25,590 | INFO     | . stage-out = 0 s
[2025-06-04 09:29:39] 2025-06-04 13:29:25,590 | INFO     | . log creation = 0 s
[2025-06-04 09:29:39] 2025-06-04 13:29:25,590 | INFO     | ..............................
[2025-06-04 09:29:39] 2025-06-04 13:29:25,646 | INFO     | 
[2025-06-04 09:29:39] 2025-06-04 13:29:25,647 | INFO     | job summary report
[2025-06-04 09:29:39] 2025-06-04 13:29:25,647 | INFO     | --------------------------------------------------
[2025-06-04 09:29:39] 2025-06-04 13:29:25,647 | INFO     | PanDA job id: 6678726546
[2025-06-04 09:29:39] 2025-06-04 13:29:25,647 | INFO     | task id: 45006595
[2025-06-04 09:29:39] 2025-06-04 13:29:25,647 | INFO     | errors: (none)
[2025-06-04 09:29:39] 2025-06-04 13:29:25,647 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:29:39] 2025-06-04 13:29:25,647 | INFO     | pilot state: finished 
[2025-06-04 09:29:39] 2025-06-04 13:29:25,647 | INFO     | transexitcode: 0
[2025-06-04 09:29:39] 2025-06-04 13:29:25,647 | INFO     | exeerrorcode: 0
[2025-06-04 09:29:39] 2025-06-04 13:29:25,647 | INFO     | exeerrordiag: 
[2025-06-04 09:29:39] 2025-06-04 13:29:25,647 | INFO     | exitcode: 0
[2025-06-04 09:29:39] 2025-06-04 13:29:25,648 | INFO     | exitmsg: OK
[2025-06-04 09:29:39] 2025-06-04 13:29:25,648 | INFO     | cpuconsumptiontime: 23142 s
[2025-06-04 09:29:39] 2025-06-04 13:29:25,648 | INFO     | nevents: 400
[2025-06-04 09:29:39] 2025-06-04 13:29:25,648 | INFO     | neventsw: 0
[2025-06-04 09:29:39] 2025-06-04 13:29:25,648 | INFO     | pid: 4058589
[2025-06-04 09:29:39] 2025-06-04 13:29:25,648 | INFO     | pgrp: 4058589
[2025-06-04 09:29:39] 2025-06-04 13:29:25,648 | INFO     | corecount: 8
[2025-06-04 09:29:39] 2025-06-04 13:29:25,648 | INFO     | event service: False
[2025-06-04 09:29:39] 2025-06-04 13:29:25,648 | INFO     | sizes: {0: 2397290, 4: 2397496, 11: 2397524, 3514: 2423209, 3515: 2432150, 3517: 2432206, 3525: 2432504}
[2025-06-04 09:29:39] 2025-06-04 13:29:25,648 | INFO     | --------------------------------------------------
[2025-06-04 09:29:39] 2025-06-04 13:29:25,648 | INFO     | 
[2025-06-04 09:29:39] 2025-06-04 13:29:25,649 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 09:29:39] 2025-06-04 13:29:25,674 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:29:39] 2025-06-04 13:29:25,675 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:29:39] 2025-06-04 13:29:25,675 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:29:39] 2025-06-04 13:29:25,675 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:29:39] 2025-06-04 13:29:25,675 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:29:39] 2025-06-04 13:29:25,675 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:29:39] 2025-06-04 13:29:25,675 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:29:39] 2025-06-04 13:29:25,675 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:29:39] 2025-06-04 13:29:25,675 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:29:39] 2025-06-04 13:29:25,675 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:29:39] 2025-06-04 13:29:25,675 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:29:39] 2025-06-04 13:29:25,675 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:29:39] 2025-06-04 13:29:25,676 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:29:39] 2025-06-04 13:29:25,676 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:29:39] 2025-06-04 13:29:25,676 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:29:39] 2025-06-04 13:29:25,676 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:29:39] 2025-06-04 13:29:25,676 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:29:39] 2025-06-04 13:29:25,676 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:29:39] 2025-06-04 13:29:25,676 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:29:39] 2025-06-04 13:29:25,676 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:29:39] 2025-06-04 13:29:25,676 | INFO     | job 6678726546 has completed (purged errors)
[2025-06-04 09:29:39] 2025-06-04 13:29:25,676 | INFO     | overall cleanup function is called
[2025-06-04 09:29:39] 2025-06-04 13:29:26,684 | INFO     | --- collectZombieJob: --- 10, [4058589]
[2025-06-04 09:29:39] 2025-06-04 13:29:26,684 | INFO     | zombie collector waiting for pid 4058589
[2025-06-04 09:29:39] 2025-06-04 13:29:26,685 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:29:39] 2025-06-04 13:29:26,685 | INFO     | collected zombie processes
[2025-06-04 09:29:39] 2025-06-04 13:29:26,685 | INFO     | will attempt to kill all subprocesses of pid=4058589
[2025-06-04 09:29:39] 2025-06-04 13:29:26,915 | INFO     | process IDs to be killed: [4058589] (in reverse order)
[2025-06-04 09:29:39] 2025-06-04 13:29:27,009 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:29:39] 2025-06-04 13:29:27,009 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:29:39] 2025-06-04 13:29:27,023 | INFO     | did not find any defunct processes belonging to 4058589
[2025-06-04 09:29:39] 2025-06-04 13:29:27,036 | INFO     | did not find any defunct processes belonging to 4058589
[2025-06-04 09:29:39] 2025-06-04 13:29:27,036 | INFO     | ready for new job
[2025-06-04 09:29:39] 2025-06-04 13:29:27,036 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:29:39] 2025-06-04 13:29:27,037 | INFO     | **************************************
[2025-06-04 09:29:39] 2025-06-04 13:29:27,037 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:29:39] 2025-06-04 13:29:27,037 | INFO     | **************************************
[2025-06-04 09:29:39] 2025-06-04 13:29:27,037 | INFO     | 
[2025-06-04 09:29:39] 2025-06-04 13:29:27,053 | INFO     | architecture information:
[2025-06-04 09:29:39] 2025-06-04 13:29:27,053 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:29:39] 2025-06-04 13:29:27,071 | INFO     | cat /etc/os-release:
[2025-06-04 09:29:39] NAME="CentOS Linux"
[2025-06-04 09:29:39] VERSION="7 (Core)"
[2025-06-04 09:29:39] ID="centos"
[2025-06-04 09:29:39] ID_LIKE="rhel fedora"
[2025-06-04 09:29:39] VERSION_ID="7"
[2025-06-04 09:29:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:29:39] ANSI_COLOR="0;31"
[2025-06-04 09:29:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:29:39] HOME_URL="https://www.centos.org/"
[2025-06-04 09:29:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:29:39] 
[2025-06-04 09:29:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:29:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:29:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:29:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:29:39] 
[2025-06-04 09:29:39] 2025-06-04 13:29:27,072 | INFO     | **************************************
[2025-06-04 09:29:39] 2025-06-04 13:29:27,574 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 09:29:39] 2025-06-04 13:29:27,591 | INFO     | sufficient remaining disk space (96214188032 B)
[2025-06-04 09:29:39] 2025-06-04 13:29:27,591 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:29:39] 2025-06-04 13:29:27,592 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:29:39] 2025-06-04 13:29:27,592 | INFO     | update_server=False
[2025-06-04 09:29:39] 2025-06-04 13:29:27,592 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:29:39] 2025-06-04 13:29:27,592 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:29:39] 2025-06-04 13:29:27,592 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:29:39] 2025-06-04 13:29:27,592 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:29:39] 2025-06-04 13:29:27,593 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:29:39] 2025-06-04 13:29:27,593 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:29:39] 2025-06-04 13:29:27,593 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:29:39] 2025-06-04 13:29:27,683 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 09:29:39] 2025-06-04 13:29:27,683 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 09:29:39] 2025-06-04 13:29:27,683 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:29:39] 2025-06-04 13:29:27,683 | INFO     | will abort loop
[2025-06-04 09:29:39] 2025-06-04 13:29:28,250 | INFO     | all data control threads have been joined
[2025-06-04 09:29:39] 2025-06-04 13:29:28,339 | INFO     | all payload control threads have been joined
[2025-06-04 09:29:39] 2025-06-04 13:29:28,597 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:29:39] 2025-06-04 13:29:28,598 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:29:39] 2025-06-04 13:29:28,689 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:29:39] 2025-06-04 13:29:28,705 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:29:39] 2025-06-04 13:29:28,734 | INFO     | all job control threads have been joined
[2025-06-04 09:29:39] 2025-06-04 13:29:28,801 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:29:39] 2025-06-04 13:29:28,924 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:29:39] 2025-06-04 13:29:28,945 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:29:39] 2025-06-04 13:29:29,095 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:29:39] 2025-06-04 13:29:29,117 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:29:39] 2025-06-04 13:29:29,255 | INFO     | [data] control thread has finished
[2025-06-04 09:29:39] 2025-06-04 13:29:29,261 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:29:39] 2025-06-04 13:29:29,344 | INFO     | [payload] control thread has finished
[2025-06-04 09:29:39] 2025-06-04 13:29:29,598 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:29:39] 2025-06-04 13:29:29,717 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:29:39] 2025-06-04 13:29:29,740 | INFO     | [job] control thread has finished
[2025-06-04 09:29:39] 2025-06-04 13:29:30,042 | INFO     | [job] validate thread has finished
[2025-06-04 09:29:39] 2025-06-04 13:29:32,951 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:29:39] 2025-06-04 13:29:33,864 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140154174834496)>', '<ExcThread(monitor, started 140153674774272)>']
[2025-06-04 09:29:39] 2025-06-04 13:29:34,628 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:29:39] 2025-06-04 13:29:34,628 | INFO     | [monitor] control thread has ended
[2025-06-04 09:29:39] 2025-06-04 13:29:38,889 | INFO     | all workflow threads have been joined
[2025-06-04 09:29:39] 2025-06-04 13:29:38,889 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:29:39] 2025-06-04 13:29:38,890 | INFO     | traces error code: 0
[2025-06-04 09:29:39] 2025-06-04 13:29:38,890 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:29:39] 2025-06-04 13:29:39,021 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:29:39] 2025-06-04 13:29:39,024 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:29:39] 2025-06-04 13:29:39,026 [wrapper] pilotpid: 4046762
[2025-06-04 09:29:39] 2025-06-04 13:29:39,029 [wrapper] Pilot exit status: 0
[2025-06-04 09:29:39] 2025-06-04 13:29:39,040 [wrapper] pandaids: 6678726546
[2025-06-04 09:29:39] 2025-06-04 13:29:39,119 [wrapper] cleanup supervisor_pilot  138114 4046763
[2025-06-04 09:29:39] 2025-06-04 13:29:39,125 [wrapper] Test setup, not cleaning
[2025-06-04 09:29:39] 2025-06-04 13:29:39,128 [wrapper] apfmon messages muted
[2025-06-04 09:29:39] 2025-06-04 13:29:39,131 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:29:39] 2025-06-04 13:29:39,133 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:29:39]  *** Error codes and diagnostics ***
[2025-06-04 09:29:39]     "exeErrorCode": 0,
[2025-06-04 09:29:39]     "exeErrorDiag": "",
[2025-06-04 09:29:39]     "pilotErrorCode": 0,
[2025-06-04 09:29:39]     "pilotErrorDiag": "",
[2025-06-04 09:29:39]  *** Listing of results directory ***
[2025-06-04 09:29:39] total 395928
[2025-06-04 09:29:39] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 09:29:39] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 03:51 queuedata.json
[2025-06-04 09:29:39] -rwx------. 1 boincer umatlas     37140 Jun  4 03:53 runpilot2-wrapper.sh
[2025-06-04 09:29:39] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:29:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:30 run_atlas
[2025-06-04 09:29:39] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:30 job.xml
[2025-06-04 09:29:39] -rw-r--r--. 2 boincer umatlas 214653932 Jun  4 08:30 EVNT.45006593._000867.pool.root.1
[2025-06-04 09:29:39] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:30 shared
[2025-06-04 09:29:39] -rw-r--r--. 2 boincer umatlas    508884 Jun  4 08:30 input.tar.gz
[2025-06-04 09:29:39] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:30 start_atlas.sh
[2025-06-04 09:29:39] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:30 boinc_lockfile
[2025-06-04 09:29:39] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 08:30 pandaJob.out
[2025-06-04 09:29:39] -rw-------. 1 boincer umatlas    986811 Jun  4 08:30 agis_schedconf.cvmfs.json
[2025-06-04 09:29:39] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:30 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:29:39] drwx------. 4 boincer umatlas      4096 Jun  4 08:30 pilot3
[2025-06-04 09:29:39] -rw-r--r--. 1 boincer umatlas      6896 Jun  4 09:21 init_data.xml
[2025-06-04 09:29:39] -rw-------. 1 boincer umatlas        95 Jun  4 09:28 pilot_heartbeat.json
[2025-06-04 09:29:39] -rw-------. 1 boincer umatlas 185617798 Jun  4 09:28 HITS.45006595._055523.pool.root.1
[2025-06-04 09:29:39] -rw-r--r--. 1 boincer umatlas       529 Jun  4 09:28 boinc_task_state.xml
[2025-06-04 09:29:39] -rw-------. 1 boincer umatlas      1028 Jun  4 09:29 memory_monitor_summary.json
[2025-06-04 09:29:39] -rw-------. 1 boincer umatlas    300771 Jun  4 09:29 log.45006595._055523.job.log.tgz.1
[2025-06-04 09:29:39] -rw-------. 1 boincer umatlas      7687 Jun  4 09:29 heartbeat.json
[2025-06-04 09:29:39] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:29 boinc_mmap_file
[2025-06-04 09:29:39] -rw-r--r--. 1 boincer umatlas        27 Jun  4 09:29 wrapper_checkpoint.txt
[2025-06-04 09:29:39] -rw-------. 1 boincer umatlas      4662 Jun  4 09:29 pilotlog.txt
[2025-06-04 09:29:39] -rw-------. 1 boincer umatlas    364392 Jun  4 09:29 log.45006595._055523.job.log.1
[2025-06-04 09:29:39] -rw-------. 1 boincer umatlas       357 Jun  4 09:29 output.list
[2025-06-04 09:29:39] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:29 runtime_log
[2025-06-04 09:29:39] -rw-------. 1 boincer umatlas    686080 Jun  4 09:29 result.tar.gz
[2025-06-04 09:29:39] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 09:29 runtime_log.err
[2025-06-04 09:29:39] -rw-------. 1 boincer umatlas       651 Jun  4 09:29 k3rNDm76xg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8knKDmbkRvKm.diag
[2025-06-04 09:29:39] -rw-r--r--. 1 boincer umatlas     21771 Jun  4 09:29 stderr.txt
[2025-06-04 09:29:39] HITS file was successfully produced:
[2025-06-04 09:29:39] -rw-------. 1 boincer umatlas 185617798 Jun  4 09:28 shared/HITS.pool.root.1
[2025-06-04 09:29:39]  *** Contents of shared directory: ***
[2025-06-04 09:29:39] total 392084
[2025-06-04 09:29:39] -rw-r--r--. 2 boincer umatlas 214653932 Jun  4 08:30 ATLAS.root_0
[2025-06-04 09:29:39] -rw-r--r--. 2 boincer umatlas    508884 Jun  4 08:30 input.tar.gz
[2025-06-04 09:29:39] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:30 start_atlas.sh
[2025-06-04 09:29:39] -rw-------. 1 boincer umatlas 185617798 Jun  4 09:28 HITS.pool.root.1
[2025-06-04 09:29:39] -rw-------. 1 boincer umatlas    686080 Jun  4 09:29 result.tar.gz
09:29:40 (4042862): run_atlas exited; CPU time 23189.192239
09:29:40 (4042862): called boinc_finish(0)

</stderr_txt>
]]>

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