Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
22:27:02 (1555716): wrapper (7.7.26015): starting
22:27:02 (1555716): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 22:27:02] Arguments: --nthreads 12
[2025-06-06 22:27:02] Threads: 12
[2025-06-06 22:27:02] Checking for CVMFS
[2025-06-06 22:27:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 22:27:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 22:27:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 22:27:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 22:27:04] 2.12.7.0 15468 5047 65444 146878 0 56 3862017 4096001 912 130560 0 4156445 99.987 1359344 147 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 22:27:04] CVMFS is ok
[2025-06-06 22:27:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 22:27:04] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 22:27:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 22:27:04] Further information can be found at the LHC@home message board.
[2025-06-06 22:27:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 22:27:04] Checking for apptainer binary...
[2025-06-06 22:27:05] apptainer is not installed, using version from CVMFS
[2025-06-06 22:27:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 22:27:05] gggg3250
[2025-06-06 22:27:05] apptainer works
[2025-06-06 22:27:06] Set ATHENA_PROC_NUMBER=12
[2025-06-06 22:27:06] Set ATHENA_CORE_NUMBER=12
[2025-06-06 22:27:06] Starting ATLAS job with PandaID=6678715735
[2025-06-06 22:27:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-07 01:46:57]  *** The last 200 lines of the pilot log: ***
[2025-06-07 01:46:57] 2025-06-07 01:46:45,949 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6678715735/memory_monitor_summary.json (trf name=prmon)
[2025-06-07 01:46:57] 2025-06-07 01:46:45,949 | INFO     | extracted standard info from prmon json
[2025-06-07 01:46:57] 2025-06-07 01:46:45,949 | INFO     | extracted standard memory fields from prmon json
[2025-06-07 01:46:57] 2025-06-07 01:46:45,949 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-07 01:46:57] 2025-06-07 01:46:45,949 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-07 01:46:57] 2025-06-07 01:46:45,949 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-07 01:46:57] 2025-06-07 01:46:45,951 | INFO     | fitting pss+swap vs Time
[2025-06-07 01:46:57] 2025-06-07 01:46:45,951 | INFO     | sum of square deviations: 2229140692.953357
[2025-06-07 01:46:57] 2025-06-07 01:46:45,952 | INFO     | sum of deviations: 35219498269.12436
[2025-06-07 01:46:57] 2025-06-07 01:46:45,952 | INFO     | mean x: 1749254876.015544
[2025-06-07 01:46:57] 2025-06-07 01:46:45,952 | INFO     | mean y: 2672988.958549223
[2025-06-07 01:46:57] 2025-06-07 01:46:45,952 | INFO     | -- intersect: -27634828436.069668
[2025-06-07 01:46:57] 2025-06-07 01:46:45,952 | INFO     | intersect: -27634828436.069668
[2025-06-07 01:46:57] 2025-06-07 01:46:45,952 | INFO     | chi2: 3.3696981555184182
[2025-06-07 01:46:57] 2025-06-07 01:46:45,952 | INFO     | sum of square deviations: 2060338442.9521267
[2025-06-07 01:46:57] 2025-06-07 01:46:45,953 | INFO     | sum of deviations: 33523457458.303226
[2025-06-07 01:46:57] 2025-06-07 01:46:45,953 | INFO     | mean x: 1749254723.5159574
[2025-06-07 01:46:57] 2025-06-07 01:46:45,953 | INFO     | mean y: 2671468.39893617
[2025-06-07 01:46:57] 2025-06-07 01:46:45,953 | INFO     | -- intersect: -28459189498.23922
[2025-06-07 01:46:57] 2025-06-07 01:46:45,953 | INFO     | intersect: -28459189498.23922
[2025-06-07 01:46:57] 2025-06-07 01:46:45,953 | INFO     | chi2: 3.3714909155705235
[2025-06-07 01:46:57] 2025-06-07 01:46:45,953 | INFO     | current chi2=3.3714909155705235 (change=-0.05320239289591379 %)
[2025-06-07 01:46:57] 2025-06-07 01:46:45,953 | INFO     | right removable region: 187
[2025-06-07 01:46:57] 2025-06-07 01:46:45,953 | INFO     | sum of square deviations: 2060336612.9521267
[2025-06-07 01:46:57] 2025-06-07 01:46:45,954 | INFO     | sum of deviations: -18176083581.808506
[2025-06-07 01:46:57] 2025-06-07 01:46:45,954 | INFO     | mean x: 1749255028.5159574
[2025-06-07 01:46:57] 2025-06-07 01:46:45,954 | INFO     | mean y: 2721003.936170213
[2025-06-07 01:46:57] 2025-06-07 01:46:45,954 | INFO     | -- intersect: 15434473953.590534
[2025-06-07 01:46:57] 2025-06-07 01:46:45,954 | INFO     | intersect: 15434473953.590534
[2025-06-07 01:46:57] 2025-06-07 01:46:45,954 | INFO     | chi2: 0.5817270148876065
[2025-06-07 01:46:57] 2025-06-07 01:46:45,954 | INFO     | current chi2=0.5817270148876065 (change=82.73652451822915 %)
[2025-06-07 01:46:57] 2025-06-07 01:46:45,954 | INFO     | sum of square deviations: 1900276882.9508126
[2025-06-07 01:46:57] 2025-06-07 01:46:45,955 | INFO     | sum of deviations: -32001900475.50822
[2025-06-07 01:46:57] 2025-06-07 01:46:45,955 | INFO     | mean x: 1749255181.0163934
[2025-06-07 01:46:57] 2025-06-07 01:46:45,955 | INFO     | mean y: 2734138.5027322406
[2025-06-07 01:46:57] 2025-06-07 01:46:45,955 | INFO     | -- intersect: 29461330783.75947
[2025-06-07 01:46:57] 2025-06-07 01:46:45,955 | INFO     | intersect: 29461330783.75947
[2025-06-07 01:46:57] 2025-06-07 01:46:45,955 | INFO     | chi2: 0.36045147379137815
[2025-06-07 01:46:57] 2025-06-07 01:46:45,955 | INFO     | current chi2=0.36045147379137815 (change=38.037693872439505 %)
[2025-06-07 01:46:57] 2025-06-07 01:46:45,955 | INFO     | sum of square deviations: 1748728940.449437
[2025-06-07 01:46:57] 2025-06-07 01:46:45,956 | INFO     | sum of deviations: -37201010927.73033
[2025-06-07 01:46:57] 2025-06-07 01:46:45,956 | INFO     | mean x: 1749255333.516854
[2025-06-07 01:46:57] 2025-06-07 01:46:45,956 | INFO     | mean y: 2739361.9101123596
[2025-06-07 01:46:57] 2025-06-07 01:46:45,956 | INFO     | -- intersect: 37214948339.72145
[2025-06-07 01:46:57] 2025-06-07 01:46:45,956 | INFO     | intersect: 37214948339.72145
[2025-06-07 01:46:57] 2025-06-07 01:46:45,956 | INFO     | chi2: 0.3032098485207951
[2025-06-07 01:46:57] 2025-06-07 01:46:45,956 | INFO     | current chi2=0.3032098485207951 (change=15.880535781555254 %)
[2025-06-07 01:46:57] 2025-06-07 01:46:45,956 | INFO     | left removable region: 30
[2025-06-07 01:46:57] 2025-06-07 01:46:45,957 | INFO     | sum of square deviations: 1199939663.9745193
[2025-06-07 01:46:57] 2025-06-07 01:46:45,957 | INFO     | sum of deviations: -14875986520.64332
[2025-06-07 01:46:57] 2025-06-07 01:46:45,957 | INFO     | mean x: 1749255608.012739
[2025-06-07 01:46:57] 2025-06-07 01:46:45,957 | INFO     | mean y: 2713003.821656051
[2025-06-07 01:46:57] 2025-06-07 01:46:45,957 | INFO     | -- intersect: 21688722415.133038
[2025-06-07 01:46:57] 2025-06-07 01:46:45,957 | INFO     | intersect: 21688722415.133038
[2025-06-07 01:46:57] 2025-06-07 01:46:45,957 | INFO     | chi2: 0.21589530657111003
[2025-06-07 01:46:57] 2025-06-07 01:46:45,957 | INFO     | -- intersect: 21688722415.133038
[2025-06-07 01:46:57] 2025-06-07 01:46:45,957 | INFO     | current memory leak: -12.40 B/s (using 157 data points, chi2=0.22)
[2025-06-07 01:46:57] 2025-06-07 01:46:45,958 | INFO     | ..............................
[2025-06-07 01:46:57] 2025-06-07 01:46:45,958 | INFO     | . Timing measurements:
[2025-06-07 01:46:57] 2025-06-07 01:46:45,958 | INFO     | . get job = 0 s
[2025-06-07 01:46:57] 2025-06-07 01:46:45,958 | INFO     | . initial setup = 5 s
[2025-06-07 01:46:57] 2025-06-07 01:46:45,958 | INFO     | . payload setup = 68 s
[2025-06-07 01:46:57] 2025-06-07 01:46:45,958 | INFO     | . stage-in = 0 s
[2025-06-07 01:46:57] 2025-06-07 01:46:45,958 | INFO     | . payload execution = 11754 s
[2025-06-07 01:46:57] 2025-06-07 01:46:45,958 | INFO     | . stage-out = 0 s
[2025-06-07 01:46:57] 2025-06-07 01:46:45,958 | INFO     | . log creation = 0 s
[2025-06-07 01:46:57] 2025-06-07 01:46:45,958 | INFO     | ..............................
[2025-06-07 01:46:57] 2025-06-07 01:46:46,001 | INFO     | 
[2025-06-07 01:46:57] 2025-06-07 01:46:46,001 | INFO     | job summary report
[2025-06-07 01:46:57] 2025-06-07 01:46:46,001 | INFO     | --------------------------------------------------
[2025-06-07 01:46:57] 2025-06-07 01:46:46,001 | INFO     | PanDA job id: 6678715735
[2025-06-07 01:46:57] 2025-06-07 01:46:46,001 | INFO     | task id: 45006595
[2025-06-07 01:46:57] 2025-06-07 01:46:46,001 | INFO     | errors: (none)
[2025-06-07 01:46:57] 2025-06-07 01:46:46,001 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-07 01:46:57] 2025-06-07 01:46:46,001 | INFO     | pilot state: finished 
[2025-06-07 01:46:57] 2025-06-07 01:46:46,001 | INFO     | transexitcode: 0
[2025-06-07 01:46:57] 2025-06-07 01:46:46,001 | INFO     | exeerrorcode: 0
[2025-06-07 01:46:57] 2025-06-07 01:46:46,001 | INFO     | exeerrordiag: 
[2025-06-07 01:46:57] 2025-06-07 01:46:46,001 | INFO     | exitcode: 0
[2025-06-07 01:46:57] 2025-06-07 01:46:46,001 | INFO     | exitmsg: OK
[2025-06-07 01:46:57] 2025-06-07 01:46:46,001 | INFO     | cpuconsumptiontime: 21193 s
[2025-06-07 01:46:57] 2025-06-07 01:46:46,001 | INFO     | nevents: 400
[2025-06-07 01:46:57] 2025-06-07 01:46:46,001 | INFO     | neventsw: 0
[2025-06-07 01:46:57] 2025-06-07 01:46:46,001 | INFO     | pid: 1565718
[2025-06-07 01:46:57] 2025-06-07 01:46:46,001 | INFO     | pgrp: 1565718
[2025-06-07 01:46:57] 2025-06-07 01:46:46,002 | INFO     | corecount: 12
[2025-06-07 01:46:57] 2025-06-07 01:46:46,002 | INFO     | event service: False
[2025-06-07 01:46:57] 2025-06-07 01:46:46,002 | INFO     | sizes: {0: 2397142, 1: 2397341, 12: 2397341, 23: 2397369, 24: 2397603, 33: 2397631, 11825: 2426779, 11826: 2426778, 11828: 2435905, 11878: 2436019}
[2025-06-07 01:46:57] 2025-06-07 01:46:46,002 | INFO     | --------------------------------------------------
[2025-06-07 01:46:57] 2025-06-07 01:46:46,002 | INFO     | 
[2025-06-07 01:46:57] 2025-06-07 01:46:46,002 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-07 01:46:57] 2025-06-07 01:46:46,011 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-07 01:46:57] 2025-06-07 01:46:46,011 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-07 01:46:57] 2025-06-07 01:46:46,011 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-07 01:46:57] 2025-06-07 01:46:46,012 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-07 01:46:57] 2025-06-07 01:46:46,012 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-07 01:46:57] 2025-06-07 01:46:46,012 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-07 01:46:57] 2025-06-07 01:46:46,012 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-07 01:46:57] 2025-06-07 01:46:46,012 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-07 01:46:57] 2025-06-07 01:46:46,012 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-07 01:46:57] 2025-06-07 01:46:46,012 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-07 01:46:57] 2025-06-07 01:46:46,012 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-07 01:46:57] 2025-06-07 01:46:46,012 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-07 01:46:57] 2025-06-07 01:46:46,012 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-07 01:46:57] 2025-06-07 01:46:46,012 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-07 01:46:57] 2025-06-07 01:46:46,012 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-07 01:46:57] 2025-06-07 01:46:46,012 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-07 01:46:57] 2025-06-07 01:46:46,012 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-07 01:46:57] 2025-06-07 01:46:46,012 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-07 01:46:57] 2025-06-07 01:46:46,012 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-07 01:46:57] 2025-06-07 01:46:46,012 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-07 01:46:57] 2025-06-07 01:46:46,012 | INFO     | job 6678715735 has completed (purged errors)
[2025-06-07 01:46:57] 2025-06-07 01:46:46,012 | INFO     | overall cleanup function is called
[2025-06-07 01:46:57] 2025-06-07 01:46:47,018 | INFO     | --- collectZombieJob: --- 10, [1565718]
[2025-06-07 01:46:57] 2025-06-07 01:46:47,019 | INFO     | zombie collector waiting for pid 1565718
[2025-06-07 01:46:57] 2025-06-07 01:46:47,019 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-07 01:46:57] 2025-06-07 01:46:47,019 | INFO     | collected zombie processes
[2025-06-07 01:46:57] 2025-06-07 01:46:47,019 | INFO     | will attempt to kill all subprocesses of pid=1565718
[2025-06-07 01:46:57] 2025-06-07 01:46:47,046 | INFO     | process IDs to be killed: [1565718] (in reverse order)
[2025-06-07 01:46:57] 2025-06-07 01:46:47,061 | WARNING  | found no corresponding commands to process id(s)
[2025-06-07 01:46:57] 2025-06-07 01:46:47,062 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-07 01:46:57] 2025-06-07 01:46:47,062 | INFO     | did not find any defunct processes belonging to 1565718
[2025-06-07 01:46:57] 2025-06-07 01:46:47,063 | INFO     | did not find any defunct processes belonging to 1565718
[2025-06-07 01:46:57] 2025-06-07 01:46:47,063 | INFO     | ready for new job
[2025-06-07 01:46:57] 2025-06-07 01:46:47,063 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-07 01:46:57] 2025-06-07 01:46:47,064 | INFO     | **************************************
[2025-06-07 01:46:57] 2025-06-07 01:46:47,064 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-07 01:46:57] 2025-06-07 01:46:47,064 | INFO     | **************************************
[2025-06-07 01:46:57] 2025-06-07 01:46:47,064 | INFO     | 
[2025-06-07 01:46:57] 2025-06-07 01:46:47,083 | INFO     | architecture information:
[2025-06-07 01:46:57] 2025-06-07 01:46:47,083 | INFO     | executing command: cat /etc/os-release
[2025-06-07 01:46:57] 2025-06-07 01:46:47,089 | INFO     | cat /etc/os-release:
[2025-06-07 01:46:57] NAME="CentOS Linux"
[2025-06-07 01:46:57] VERSION="7 (Core)"
[2025-06-07 01:46:57] ID="centos"
[2025-06-07 01:46:57] ID_LIKE="rhel fedora"
[2025-06-07 01:46:57] VERSION_ID="7"
[2025-06-07 01:46:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-07 01:46:57] ANSI_COLOR="0;31"
[2025-06-07 01:46:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-07 01:46:57] HOME_URL="https://www.centos.org/"
[2025-06-07 01:46:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-07 01:46:57] 
[2025-06-07 01:46:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-07 01:46:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-07 01:46:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-07 01:46:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-07 01:46:57] 
[2025-06-07 01:46:57] 2025-06-07 01:46:47,089 | INFO     | **************************************
[2025-06-07 01:46:57] 2025-06-07 01:46:47,591 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-07 01:46:57] 2025-06-07 01:46:47,596 | INFO     | sufficient remaining disk space (99862183936 B)
[2025-06-07 01:46:57] 2025-06-07 01:46:47,596 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-07 01:46:57] 2025-06-07 01:46:47,596 | INFO     | current server update state: UPDATING_FINAL
[2025-06-07 01:46:57] 2025-06-07 01:46:47,596 | INFO     | update_server=False
[2025-06-07 01:46:57] 2025-06-07 01:46:47,596 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-07 01:46:57] 2025-06-07 01:46:47,597 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-07 01:46:57] 2025-06-07 01:46:47,597 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-07 01:46:57] 2025-06-07 01:46:47,597 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-07 01:46:57] 2025-06-07 01:46:47,597 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-07 01:46:57] 2025-06-07 01:46:47,597 | INFO     | found 0 job(s) in 20 queues
[2025-06-07 01:46:57] 2025-06-07 01:46:47,597 | INFO     | aborting loop
[2025-06-07 01:46:57] 2025-06-07 01:46:47,598 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-07 01:46:57] 2025-06-07 01:46:47,598 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-07 01:46:57] 2025-06-07 01:46:47,672 | INFO     | all data control threads have been joined
[2025-06-07 01:46:57] 2025-06-07 01:46:48,241 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-07 01:46:57] 2025-06-07 01:46:48,481 | INFO     | all payload control threads have been joined
[2025-06-07 01:46:57] 2025-06-07 01:46:48,599 | INFO     | [job] retrieve thread has finished
[2025-06-07 01:46:57] 2025-06-07 01:46:48,603 | INFO     | [job] job monitor thread has finished
[2025-06-07 01:46:57] 2025-06-07 01:46:48,603 | INFO     | [job] queue monitor thread has finished
[2025-06-07 01:46:57] 2025-06-07 01:46:48,627 | INFO     | [payload] validate_post thread has finished
[2025-06-07 01:46:57] 2025-06-07 01:46:48,677 | INFO     | [data] control thread has finished
[2025-06-07 01:46:57] 2025-06-07 01:46:48,762 | INFO     | [payload] validate_pre thread has finished
[2025-06-07 01:46:57] 2025-06-07 01:46:48,955 | INFO     | [data] copytool_in thread has finished
[2025-06-07 01:46:57] 2025-06-07 01:46:49,190 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-07 01:46:57] 2025-06-07 01:46:49,211 | INFO     | all job control threads have been joined
[2025-06-07 01:46:57] 2025-06-07 01:46:49,434 | INFO     | [payload] failed_post thread has finished
[2025-06-07 01:46:57] 2025-06-07 01:46:49,487 | INFO     | [payload] control thread has finished
[2025-06-07 01:46:57] 2025-06-07 01:46:49,690 | INFO     | [payload] execute_payloads thread has finished
[2025-06-07 01:46:57] 2025-06-07 01:46:49,718 | INFO     | [job] validate thread has finished
[2025-06-07 01:46:57] 2025-06-07 01:46:49,887 | INFO     | [job] create_data_payload thread has finished
[2025-06-07 01:46:57] 2025-06-07 01:46:50,214 | INFO     | [job] control thread has finished
[2025-06-07 01:46:57] 2025-06-07 01:46:50,245 | INFO     | [data] copytool_out thread has finished
[2025-06-07 01:46:57] 2025-06-07 01:46:51,603 | INFO     | [data] queue_monitor thread has finished
[2025-06-07 01:46:57] 2025-06-07 01:46:52,186 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140315541780288)>', '<ExcThread(monitor, started 140314945767168)>']
[2025-06-07 01:46:57] 2025-06-07 01:46:52,618 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-07 01:46:57] 2025-06-07 01:46:52,618 | INFO     | [monitor] control thread has ended
[2025-06-07 01:46:57] 2025-06-07 01:46:57,211 | INFO     | all workflow threads have been joined
[2025-06-07 01:46:57] 2025-06-07 01:46:57,211 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-07 01:46:57] 2025-06-07 01:46:57,211 | INFO     | traces error code: 0
[2025-06-07 01:46:57] 2025-06-07 01:46:57,212 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-07 01:46:57] 2025-06-07 01:46:57,271 [wrapper] ==== pilot stdout END ====
[2025-06-07 01:46:57] 2025-06-07 01:46:57,272 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-07 01:46:57] 2025-06-07 01:46:57,274 [wrapper] pilotpid: 1559298
[2025-06-07 01:46:57] 2025-06-07 01:46:57,275 [wrapper] Pilot exit status: 0
[2025-06-07 01:46:57] 2025-06-07 01:46:57,279 [wrapper] pandaids: 6678715735
[2025-06-07 01:46:57] 2025-06-07 01:46:57,287 [wrapper] cleanup supervisor_pilot 1599863 1559299
[2025-06-07 01:46:57] 2025-06-07 01:46:57,288 [wrapper] Test setup, not cleaning
[2025-06-07 01:46:57] 2025-06-07 01:46:57,290 [wrapper] apfmon messages muted
[2025-06-07 01:46:57] 2025-06-07 01:46:57,291 [wrapper] ==== wrapper stdout END ====
[2025-06-07 01:46:57] 2025-06-07 01:46:57,292 [wrapper] ==== wrapper stderr END ====
[2025-06-07 01:46:57]  *** Error codes and diagnostics ***
[2025-06-07 01:46:57]     "exeErrorCode": 0,
[2025-06-07 01:46:57]     "exeErrorDiag": "",
[2025-06-07 01:46:57]     "pilotErrorCode": 0,
[2025-06-07 01:46:57]     "pilotErrorDiag": "",
[2025-06-07 01:46:57]  *** Listing of results directory ***
[2025-06-07 01:46:57] total 391908
[2025-06-07 01:46:57] -rw-r--r-- 1 boinc boinc    495897 Jun  4 07:34 pilot3.tar.gz
[2025-06-07 01:46:57] -rw-r--r-- 1 boinc boinc      5111 Jun  4 07:51 queuedata.json
[2025-06-07 01:46:57] -rwx------ 1 boinc boinc     37140 Jun  4 07:53 runpilot2-wrapper.sh
[2025-06-07 01:46:57] -rw-rw-r-- 1 boinc boinc       100 Jun  6 22:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-07 01:46:57] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 22:27 run_atlas
[2025-06-07 01:46:57] -rw-rw-r-- 1 boinc boinc       105 Jun  6 22:27 job.xml
[2025-06-07 01:46:57] -rw-rw-r-- 1 boinc boinc      9367 Jun  6 22:27 init_data.xml
[2025-06-07 01:46:57] -rw-r--r-- 2 boinc boinc 216091767 Jun  6 22:27 EVNT.45006593._000915.pool.root.1
[2025-06-07 01:46:57] -rw-r--r-- 2 boinc boinc     15093 Jun  6 22:27 start_atlas.sh
[2025-06-07 01:46:57] drwxrwx--x 2 boinc boinc      4096 Jun  6 22:27 shared
[2025-06-07 01:46:57] -rw-r--r-- 2 boinc boinc    508884 Jun  6 22:27 input.tar.gz
[2025-06-07 01:46:57] -rw-rw-r-- 1 boinc boinc         0 Jun  6 22:27 boinc_lockfile
[2025-06-07 01:46:57] -rw-rw-r-- 1 boinc boinc      2524 Jun  6 22:27 pandaJob.out
[2025-06-07 01:46:57] -rw------- 1 boinc boinc    985748 Jun  6 22:27 agis_schedconf.cvmfs.json
[2025-06-07 01:46:57] drwx------ 4 boinc boinc      4096 Jun  6 22:27 pilot3
[2025-06-07 01:46:57] -rw------- 1 boinc boinc 178292367 Jun  7 01:45 HITS.45006595._055511.pool.root.1
[2025-06-07 01:46:57] -rw-rw-r-- 1 boinc boinc       530 Jun  7 01:45 boinc_task_state.xml
[2025-06-07 01:46:57] -rw------- 1 boinc boinc      1020 Jun  7 01:45 memory_monitor_summary.json
[2025-06-07 01:46:57] -rw------- 1 boinc boinc   1598969 Jun  7 01:45 agis_ddmendpoints.agis.ALL.json
[2025-06-07 01:46:57] -rw------- 1 boinc boinc    426176 Jun  7 01:45 log.45006595._055511.job.log.tgz.1
[2025-06-07 01:46:57] -rw------- 1 boinc boinc        95 Jun  7 01:46 pilot_heartbeat.json
[2025-06-07 01:46:57] -rw-rw-r-- 1 boinc boinc      8192 Jun  7 01:46 boinc_mmap_file
[2025-06-07 01:46:57] -rw-rw-r-- 1 boinc boinc        28 Jun  7 01:46 wrapper_checkpoint.txt
[2025-06-07 01:46:57] -rw------- 1 boinc boinc      7675 Jun  7 01:46 heartbeat.json
[2025-06-07 01:46:57] -rw------- 1 boinc boinc      4499 Jun  7 01:46 pilotlog.txt
[2025-06-07 01:46:57] -rw------- 1 boinc boinc   1116752 Jun  7 01:46 log.45006595._055511.job.log.1
[2025-06-07 01:46:57] -rw------- 1 boinc boinc       357 Jun  7 01:46 output.list
[2025-06-07 01:46:57] -rw-rw-r-- 1 boinc boinc       620 Jun  7 01:46 runtime_log
[2025-06-07 01:46:57] -rw------- 1 boinc boinc   1566720 Jun  7 01:46 result.tar.gz
[2025-06-07 01:46:57] -rw-rw-r-- 1 boinc boinc      8972 Jun  7 01:46 runtime_log.err
[2025-06-07 01:46:57] -rw------- 1 boinc boinc       653 Jun  7 01:46 TaWNDm76xg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwknKDmMMo5Dm.diag
[2025-06-07 01:46:57] -rw-rw-r-- 1 boinc boinc     21145 Jun  7 01:46 stderr.txt
[2025-06-07 01:46:57] HITS file was successfully produced:
[2025-06-07 01:46:57] -rw------- 1 boinc boinc 178292367 Jun  7 01:45 shared/HITS.pool.root.1
[2025-06-07 01:46:57]  *** Contents of shared directory: ***
[2025-06-07 01:46:57] total 387200
[2025-06-07 01:46:57] -rw-r--r-- 2 boinc boinc 216091767 Jun  6 22:27 ATLAS.root_0
[2025-06-07 01:46:57] -rw-r--r-- 2 boinc boinc     15093 Jun  6 22:27 start_atlas.sh
[2025-06-07 01:46:57] -rw-r--r-- 2 boinc boinc    508884 Jun  6 22:27 input.tar.gz
[2025-06-07 01:46:57] -rw------- 1 boinc boinc 178292367 Jun  7 01:45 HITS.pool.root.1
[2025-06-07 01:46:57] -rw------- 1 boinc boinc   1566720 Jun  7 01:46 result.tar.gz
01:46:58 (1555716): run_atlas exited; CPU time 21234.350750
01:46:58 (1555716): called boinc_finish(0)

</stderr_txt>
]]>

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