Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:40:33 (3248080): wrapper (7.7.26015): starting
08:40:33 (3248080): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:40:33] Arguments: --nthreads 8
[2025-06-04 08:40:33] Threads: 8
[2025-06-04 08:40:33] Checking for CVMFS
[2025-06-04 08:40:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:40:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:40:33] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:40:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:40:34] 2.12.6.0 6829 1350 175424 146780 0 454 27807436 32935937 9849 16776704 0 18703260 99.882 4149010 35362 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:40:34] CVMFS is ok
[2025-06-04 08:40:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:40:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:40:34] Further information can be found at the LHC@home message board.
[2025-06-04 08:40:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:40:34] Checking for apptainer binary...
[2025-06-04 08:40:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:40:34] Running /usr/bin/apptainer --version
[2025-06-04 08:40:34] apptainer version 1.4.1-1.el9
[2025-06-04 08:40:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:40:34] c6-8-25-3.aglt2.org
[2025-06-04 08:40:34] apptainer works
[2025-06-04 08:40:34] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:40:34] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:40:34] Starting ATLAS job with PandaID=6678392000
[2025-06-04 08:40:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:36:14]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:36:14]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 09:36:14]  is_altstaged=None
[2025-06-04 09:36:14]  is_tar=False
[2025-06-04 09:36:14]  lfn=log.45006595._055029.job.log.tgz.1
[2025-06-04 09:36:14]  mtime=0
[2025-06-04 09:36:14]  protocol_id=None
[2025-06-04 09:36:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:36:14]  replicas=None
[2025-06-04 09:36:14]  scope=mc23_13p6TeV
[2025-06-04 09:36:14]  status=None
[2025-06-04 09:36:14]  status_code=0
[2025-06-04 09:36:14]  storage_token=
[2025-06-04 09:36:14]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6678392000/log.45006595._055029.job.log.tgz.1
[2025-06-04 09:36:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e8/22/log.45006595._055029.job.log.tgz.1
[2025-06-04 09:36:14]  workdir=None
[2025-06-04 09:36:14] ]
[2025-06-04 09:36:14] 2025-06-04 13:35:49,280 | INFO     | transferring file log.45006595._055029.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6678392000/log.45006595._055029.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:36:14] 2025-06-04 13:35:49,280 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6678392000/log.45006595._055029.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._055029.job
[2025-06-04 09:36:14] 2025-06-04 13:35:49,297 | INFO     | adding to output.list: log.45006595._055029.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e8/22/log.45006595._055029.job.log.tg
[2025-06-04 09:36:14] 2025-06-04 13:35:49,298 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:36:14] 2025-06-04 13:35:49,298 | INFO     | summary of transferred files:
[2025-06-04 09:36:14] 2025-06-04 13:35:49,298 | INFO     |  -- lfn=log.45006595._055029.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:36:14] 2025-06-04 13:35:49,299 | INFO     | stage-out finished correctly
[2025-06-04 09:36:14] 2025-06-04 13:35:49,380 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:36:14] 2025-06-04 13:35:51,300 | INFO     | 3312s have passed since pilot start - server update state is 'RUNNING'
[2025-06-04 09:36:14] 2025-06-04 13:35:51,461 | INFO     | monitor loop #248: job 0:6678392000 is in state 'finished'
[2025-06-04 09:36:14] 2025-06-04 13:35:51,462 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:36:14] 2025-06-04 13:35:52,297 | INFO     | job 6678392000 has state=finished
[2025-06-04 09:36:14] 2025-06-04 13:35:52,297 | INFO     | preparing for final server update for job 6678392000 in state='finished'
[2025-06-04 09:36:14] 2025-06-04 13:35:52,354 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 09:36:14] 2025-06-04 13:35:52,355 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:36:14] 2025-06-04 13:35:52,355 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:36:14] 2025-06-04 13:35:52,355 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:36:14] 2025-06-04 13:35:52,355 | INFO     | job 6678392000 has finished - writing final server update
[2025-06-04 09:36:14] 2025-06-04 13:35:52,355 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:36:14] 2025-06-04 13:35:52,373 | INFO     | executing command: lscpu
[2025-06-04 09:36:14] 2025-06-04 13:35:52,438 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:36:14] 2025-06-04 13:35:53,965 | INFO     | monitor loop #249: job 0:6678392000 is in state 'finished'
[2025-06-04 09:36:14] 2025-06-04 13:35:53,965 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:36:14] 2025-06-04 13:35:55,076 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:36:14] 2025-06-04 13:35:55,076 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678392000/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:36:14] 2025-06-04 13:35:55,077 | INFO     | extracted standard info from prmon json
[2025-06-04 09:36:14] 2025-06-04 13:35:55,077 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:36:14] 2025-06-04 13:35:55,077 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:36:14] 2025-06-04 13:35:55,077 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:36:14] 2025-06-04 13:35:55,077 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:36:14] 2025-06-04 13:35:55,078 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:36:14] 2025-06-04 13:35:55,078 | INFO     | sum of square deviations: 32179208.0
[2025-06-04 09:36:14] 2025-06-04 13:35:55,079 | INFO     | sum of deviations: 2905448422.0000005
[2025-06-04 09:36:14] 2025-06-04 13:35:55,079 | INFO     | mean x: 1749042571.0
[2025-06-04 09:36:14] 2025-06-04 13:35:55,079 | INFO     | mean y: 2193429.3829787234
[2025-06-04 09:36:14] 2025-06-04 13:35:55,079 | INFO     | -- intersect: -157918193483.89267
[2025-06-04 09:36:14] 2025-06-04 13:35:55,079 | INFO     | intersect: -157918193483.89267
[2025-06-04 09:36:14] 2025-06-04 13:35:55,079 | INFO     | chi2: 0.6627408472479104
[2025-06-04 09:36:14] 2025-06-04 13:35:55,079 | INFO     | -- intersect: -157918193483.89267
[2025-06-04 09:36:14] 2025-06-04 13:35:55,079 | INFO     | current memory leak: 90.29 B/s (using 47 data points, chi2=0.66)
[2025-06-04 09:36:14] 2025-06-04 13:35:55,079 | INFO     | ..............................
[2025-06-04 09:36:14] 2025-06-04 13:35:55,079 | INFO     | . Timing measurements:
[2025-06-04 09:36:14] 2025-06-04 13:35:55,079 | INFO     | . get job = 0 s
[2025-06-04 09:36:14] 2025-06-04 13:35:55,079 | INFO     | . initial setup = 2 s
[2025-06-04 09:36:14] 2025-06-04 13:35:55,079 | INFO     | . payload setup = 4 s
[2025-06-04 09:36:14] 2025-06-04 13:35:55,080 | INFO     | . stage-in = 0 s
[2025-06-04 09:36:14] 2025-06-04 13:35:55,080 | INFO     | . payload execution = 3285 s
[2025-06-04 09:36:14] 2025-06-04 13:35:55,080 | INFO     | . stage-out = 0 s
[2025-06-04 09:36:14] 2025-06-04 13:35:55,080 | INFO     | . log creation = 0 s
[2025-06-04 09:36:14] 2025-06-04 13:35:55,080 | INFO     | ..............................
[2025-06-04 09:36:14] 2025-06-04 13:35:55,127 | INFO     | 
[2025-06-04 09:36:14] 2025-06-04 13:35:55,127 | INFO     | job summary report
[2025-06-04 09:36:14] 2025-06-04 13:35:55,127 | INFO     | --------------------------------------------------
[2025-06-04 09:36:14] 2025-06-04 13:35:55,127 | INFO     | PanDA job id: 6678392000
[2025-06-04 09:36:14] 2025-06-04 13:35:55,128 | INFO     | task id: 45006595
[2025-06-04 09:36:14] 2025-06-04 13:35:55,128 | INFO     | errors: (none)
[2025-06-04 09:36:14] 2025-06-04 13:35:55,128 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:36:14] 2025-06-04 13:35:55,128 | INFO     | pilot state: finished 
[2025-06-04 09:36:14] 2025-06-04 13:35:55,128 | INFO     | transexitcode: 0
[2025-06-04 09:36:14] 2025-06-04 13:35:55,128 | INFO     | exeerrorcode: 0
[2025-06-04 09:36:14] 2025-06-04 13:35:55,128 | INFO     | exeerrordiag: 
[2025-06-04 09:36:14] 2025-06-04 13:35:55,128 | INFO     | exitcode: 0
[2025-06-04 09:36:14] 2025-06-04 13:35:55,128 | INFO     | exitmsg: OK
[2025-06-04 09:36:14] 2025-06-04 13:35:55,128 | INFO     | cpuconsumptiontime: 21546 s
[2025-06-04 09:36:14] 2025-06-04 13:35:55,128 | INFO     | nevents: 400
[2025-06-04 09:36:14] 2025-06-04 13:35:55,128 | INFO     | neventsw: 0
[2025-06-04 09:36:14] 2025-06-04 13:35:55,128 | INFO     | pid: 3258727
[2025-06-04 09:36:14] 2025-06-04 13:35:55,128 | INFO     | pgrp: 3258727
[2025-06-04 09:36:14] 2025-06-04 13:35:55,129 | INFO     | corecount: 8
[2025-06-04 09:36:14] 2025-06-04 13:35:55,129 | INFO     | event service: False
[2025-06-04 09:36:14] 2025-06-04 13:35:55,129 | INFO     | sizes: {0: 2397342, 3: 2397548, 11: 2397576, 3293: 2423020, 3295: 2432017, 3300: 2432131}
[2025-06-04 09:36:14] 2025-06-04 13:35:55,129 | INFO     | --------------------------------------------------
[2025-06-04 09:36:14] 2025-06-04 13:35:55,129 | INFO     | 
[2025-06-04 09:36:14] 2025-06-04 13:35:55,129 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 09:36:14] 2025-06-04 13:35:55,142 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:36:14] 2025-06-04 13:35:55,142 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:36:14] 2025-06-04 13:35:55,143 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:36:14] 2025-06-04 13:35:55,143 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:36:14] 2025-06-04 13:35:55,143 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:36:14] 2025-06-04 13:35:55,143 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:36:14] 2025-06-04 13:35:55,143 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:36:14] 2025-06-04 13:35:55,143 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:36:14] 2025-06-04 13:35:55,143 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:36:14] 2025-06-04 13:35:55,143 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:36:14] 2025-06-04 13:35:55,143 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:36:14] 2025-06-04 13:35:55,143 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:36:14] 2025-06-04 13:35:55,143 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:36:14] 2025-06-04 13:35:55,143 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:36:14] 2025-06-04 13:35:55,144 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:36:14] 2025-06-04 13:35:55,144 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:36:14] 2025-06-04 13:35:55,144 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:36:14] 2025-06-04 13:35:55,144 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:36:14] 2025-06-04 13:35:55,144 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:36:14] 2025-06-04 13:35:55,144 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:36:14] 2025-06-04 13:35:55,144 | INFO     | job 6678392000 has completed (purged errors)
[2025-06-04 09:36:14] 2025-06-04 13:35:55,144 | INFO     | overall cleanup function is called
[2025-06-04 09:36:14] 2025-06-04 13:35:56,152 | INFO     | --- collectZombieJob: --- 10, [3258727]
[2025-06-04 09:36:14] 2025-06-04 13:35:56,152 | INFO     | zombie collector waiting for pid 3258727
[2025-06-04 09:36:14] 2025-06-04 13:35:56,152 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:36:14] 2025-06-04 13:35:56,152 | INFO     | collected zombie processes
[2025-06-04 09:36:14] 2025-06-04 13:35:56,152 | INFO     | will attempt to kill all subprocesses of pid=3258727
[2025-06-04 09:36:14] 2025-06-04 13:35:56,440 | INFO     | process IDs to be killed: [3258727] (in reverse order)
[2025-06-04 09:36:14] 2025-06-04 13:35:56,528 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:36:14] 2025-06-04 13:35:56,528 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:36:14] 2025-06-04 13:35:56,540 | INFO     | did not find any defunct processes belonging to 3258727
[2025-06-04 09:36:14] 2025-06-04 13:35:56,551 | INFO     | did not find any defunct processes belonging to 3258727
[2025-06-04 09:36:14] 2025-06-04 13:35:56,552 | INFO     | ready for new job
[2025-06-04 09:36:14] 2025-06-04 13:35:56,552 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:36:14] 2025-06-04 13:35:56,553 | INFO     | **************************************
[2025-06-04 09:36:14] 2025-06-04 13:35:56,553 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:36:14] 2025-06-04 13:35:56,553 | INFO     | **************************************
[2025-06-04 09:36:14] 2025-06-04 13:35:56,553 | INFO     | 
[2025-06-04 09:36:14] 2025-06-04 13:35:56,570 | INFO     | architecture information:
[2025-06-04 09:36:14] 2025-06-04 13:35:56,571 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:36:14] 2025-06-04 13:35:56,585 | INFO     | cat /etc/os-release:
[2025-06-04 09:36:14] NAME="CentOS Linux"
[2025-06-04 09:36:14] VERSION="7 (Core)"
[2025-06-04 09:36:14] ID="centos"
[2025-06-04 09:36:14] ID_LIKE="rhel fedora"
[2025-06-04 09:36:14] VERSION_ID="7"
[2025-06-04 09:36:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:36:14] ANSI_COLOR="0;31"
[2025-06-04 09:36:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:36:14] HOME_URL="https://www.centos.org/"
[2025-06-04 09:36:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:36:14] 
[2025-06-04 09:36:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:36:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:36:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:36:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:36:14] 
[2025-06-04 09:36:14] 2025-06-04 13:35:56,586 | INFO     | **************************************
[2025-06-04 09:36:14] 2025-06-04 13:35:57,088 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 09:36:14] 2025-06-04 13:35:57,104 | INFO     | sufficient remaining disk space (75576115200 B)
[2025-06-04 09:36:14] 2025-06-04 13:35:57,104 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:36:14] 2025-06-04 13:35:57,104 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:36:14] 2025-06-04 13:35:57,104 | INFO     | update_server=False
[2025-06-04 09:36:14] 2025-06-04 13:35:57,104 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:36:14] 2025-06-04 13:35:57,105 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:36:14] 2025-06-04 13:35:57,105 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:36:14] 2025-06-04 13:35:57,105 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:36:14] 2025-06-04 13:35:57,105 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:36:14] 2025-06-04 13:35:57,105 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:36:14] 2025-06-04 13:35:57,390 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:36:14] 2025-06-04 13:35:57,437 | INFO     | all data control threads have been joined
[2025-06-04 09:36:14] 2025-06-04 13:35:57,469 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:36:14] 2025-06-04 13:35:57,470 | INFO     | aborting loop
[2025-06-04 09:36:14] 2025-06-04 13:35:57,514 | INFO     | all job control threads have been joined
[2025-06-04 09:36:14] 2025-06-04 13:35:58,048 | INFO     | all payload control threads have been joined
[2025-06-04 09:36:14] 2025-06-04 13:35:58,108 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:36:14] 2025-06-04 13:35:58,110 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:36:14] 2025-06-04 13:35:58,118 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:36:14] 2025-06-04 13:35:58,443 | INFO     | [data] control thread has finished
[2025-06-04 09:36:14] 2025-06-04 13:35:58,471 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:36:14] 2025-06-04 13:35:58,519 | INFO     | [job] control thread has finished
[2025-06-04 09:36:14] 2025-06-04 13:35:58,812 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:36:14] 2025-06-04 13:35:58,853 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:36:14] 2025-06-04 13:35:58,909 | INFO     | [job] validate thread has finished
[2025-06-04 09:36:14] 2025-06-04 13:35:59,008 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:36:14] 2025-06-04 13:35:59,051 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:36:14] 2025-06-04 13:35:59,053 | INFO     | [payload] control thread has finished
[2025-06-04 09:36:14] 2025-06-04 13:35:59,138 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:36:14] 2025-06-04 13:35:59,396 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:36:14] 2025-06-04 13:35:59,972 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:36:14] 2025-06-04 13:36:03,975 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:36:14] 2025-06-04 13:36:07,684 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:36:14] 2025-06-04 13:36:08,689 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:36:14] 2025-06-04 13:36:09,135 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140138988308288)>', '<ExcThread(monitor, started 140138273306368)>']
[2025-06-04 09:36:14] 2025-06-04 13:36:09,161 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:36:14] 2025-06-04 13:36:09,162 | INFO     | [monitor] control thread has ended
[2025-06-04 09:36:14] 2025-06-04 13:36:14,160 | INFO     | all workflow threads have been joined
[2025-06-04 09:36:14] 2025-06-04 13:36:14,160 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:36:14] 2025-06-04 13:36:14,161 | INFO     | traces error code: 0
[2025-06-04 09:36:14] 2025-06-04 13:36:14,161 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:36:14] 2025-06-04 13:36:14,284 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:36:14] 2025-06-04 13:36:14,286 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:36:14] 2025-06-04 13:36:14,289 [wrapper] pilotpid: 3251727
[2025-06-04 09:36:14] 2025-06-04 13:36:14,291 [wrapper] Pilot exit status: 0
[2025-06-04 09:36:14] 2025-06-04 13:36:14,301 [wrapper] pandaids: 6678392000
[2025-06-04 09:36:14] 2025-06-04 13:36:14,361 [wrapper] cleanup supervisor_pilot 3415066 3251728
[2025-06-04 09:36:14] 2025-06-04 13:36:14,363 [wrapper] Test setup, not cleaning
[2025-06-04 09:36:14] 2025-06-04 13:36:14,365 [wrapper] apfmon messages muted
[2025-06-04 09:36:14] 2025-06-04 13:36:14,367 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:36:14] 2025-06-04 13:36:14,369 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:36:14]  *** Error codes and diagnostics ***
[2025-06-04 09:36:14]     "exeErrorCode": 0,
[2025-06-04 09:36:14]     "exeErrorDiag": "",
[2025-06-04 09:36:14]     "pilotErrorCode": 0,
[2025-06-04 09:36:14]     "pilotErrorDiag": "",
[2025-06-04 09:36:14]  *** Listing of results directory ***
[2025-06-04 09:36:14] total 383004
[2025-06-04 09:36:14] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 09:36:14] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 03:37 queuedata.json
[2025-06-04 09:36:14] -rwx------. 1 boincer umatlas     37140 Jun  4 03:37 runpilot2-wrapper.sh
[2025-06-04 09:36:14] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:36:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:40 run_atlas
[2025-06-04 09:36:14] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:40 job.xml
[2025-06-04 09:36:14] -rw-r--r--. 2 boincer umatlas 215403234 Jun  4 08:40 EVNT.45006593._002202.pool.root.1
[2025-06-04 09:36:14] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:40 start_atlas.sh
[2025-06-04 09:36:14] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:40 shared
[2025-06-04 09:36:14] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 08:40 input.tar.gz
[2025-06-04 09:36:14] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:40 boinc_lockfile
[2025-06-04 09:36:14] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 08:40 pandaJob.out
[2025-06-04 09:36:14] -rw-------. 1 boincer umatlas    986811 Jun  4 08:40 agis_schedconf.cvmfs.json
[2025-06-04 09:36:14] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:40 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:36:14] drwx------. 4 boincer umatlas      4096 Jun  4 08:40 pilot3
[2025-06-04 09:36:14] -rw-r--r--. 1 boincer umatlas      6856 Jun  4 09:27 init_data.xml
[2025-06-04 09:36:14] -rw-------. 1 boincer umatlas 171726955 Jun  4 09:35 HITS.45006595._055029.pool.root.1
[2025-06-04 09:36:14] -rw-r--r--. 1 boincer umatlas       529 Jun  4 09:35 boinc_task_state.xml
[2025-06-04 09:36:14] -rw-------. 1 boincer umatlas      1032 Jun  4 09:35 memory_monitor_summary.json
[2025-06-04 09:36:14] -rw-------. 1 boincer umatlas        95 Jun  4 09:35 pilot_heartbeat.json
[2025-06-04 09:36:14] -rw-------. 1 boincer umatlas    279210 Jun  4 09:35 log.45006595._055029.job.log.tgz.1
[2025-06-04 09:36:14] -rw-------. 1 boincer umatlas      7721 Jun  4 09:35 heartbeat.json
[2025-06-04 09:36:14] -rw-r--r--. 1 boincer umatlas        27 Jun  4 09:36 wrapper_checkpoint.txt
[2025-06-04 09:36:14] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:36 boinc_mmap_file
[2025-06-04 09:36:14] -rw-------. 1 boincer umatlas      4548 Jun  4 09:36 pilotlog.txt
[2025-06-04 09:36:14] -rw-------. 1 boincer umatlas    339935 Jun  4 09:36 log.45006595._055029.job.log.1
[2025-06-04 09:36:14] -rw-------. 1 boincer umatlas       357 Jun  4 09:36 output.list
[2025-06-04 09:36:14] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:36 runtime_log
[2025-06-04 09:36:14] -rw-------. 1 boincer umatlas    634880 Jun  4 09:36 result.tar.gz
[2025-06-04 09:36:14] -rw-------. 1 boincer umatlas       652 Jun  4 09:36 YkrKDmHsxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVfnKDmEK5Xsm.diag
[2025-06-04 09:36:14] -rw-r--r--. 1 boincer umatlas      8664 Jun  4 09:36 runtime_log.err
[2025-06-04 09:36:14] -rw-r--r--. 1 boincer umatlas     21343 Jun  4 09:36 stderr.txt
[2025-06-04 09:36:14] HITS file was successfully produced:
[2025-06-04 09:36:14] -rw-------. 1 boincer umatlas 171726955 Jun  4 09:35 shared/HITS.pool.root.1
[2025-06-04 09:36:14]  *** Contents of shared directory: ***
[2025-06-04 09:36:14] total 379204
[2025-06-04 09:36:14] -rw-r--r--. 2 boincer umatlas 215403234 Jun  4 08:40 ATLAS.root_0
[2025-06-04 09:36:14] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:40 start_atlas.sh
[2025-06-04 09:36:14] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 08:40 input.tar.gz
[2025-06-04 09:36:14] -rw-------. 1 boincer umatlas 171726955 Jun  4 09:35 HITS.pool.root.1
[2025-06-04 09:36:14] -rw-------. 1 boincer umatlas    634880 Jun  4 09:36 result.tar.gz
09:36:16 (3248080): run_atlas exited; CPU time 21654.876468
09:36:16 (3248080): called boinc_finish(0)

</stderr_txt>
]]>

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