Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
14:04:30 (1875244): wrapper (7.7.26015): starting
14:04:30 (1875244): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 14:04:30] Arguments: --nthreads 12
[2025-06-04 14:04:30] Threads: 12
[2025-06-04 14:04:30] Checking for CVMFS
[2025-06-04 14:04:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 14:04:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 14:04:30] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 14:04:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 14:04:30] 2.12.7.0 29207 2005 77096 146781 3 187 2028404 4096000 13484 130560 17 26215403 99.999 473789 145 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 14:04:30] CVMFS is ok
[2025-06-04 14:04:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 14:04:30] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 14:04:30] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 14:04:30] Further information can be found at the LHC@home message board.
[2025-06-04 14:04:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 14:04:30] Checking for apptainer binary...
[2025-06-04 14:04:30] apptainer is not installed, using version from CVMFS
[2025-06-04 14:04:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 14:04:31] epyc7v12
[2025-06-04 14:04:31] apptainer works
[2025-06-04 14:04:31] Set ATHENA_PROC_NUMBER=12
[2025-06-04 14:04:31] Set ATHENA_CORE_NUMBER=12
[2025-06-04 14:04:31] Starting ATLAS job with PandaID=6678491645
[2025-06-04 14:04:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 15:50:07]  *** The last 200 lines of the pilot log: ***
[2025-06-04 15:50:07] 2025-06-04 15:49:47,797 | INFO     | mean y: 2563278.0485436893
[2025-06-04 15:50:07] 2025-06-04 15:49:47,797 | INFO     | -- intersect: -132040979904.12459
[2025-06-04 15:50:07] 2025-06-04 15:49:47,797 | INFO     | intersect: -132040979904.12459
[2025-06-04 15:50:07] 2025-06-04 15:49:47,797 | INFO     | chi2: 1.846962221587315
[2025-06-04 15:50:07] 2025-06-04 15:49:47,797 | INFO     | sum of square deviations: 291817564.5
[2025-06-04 15:50:07] 2025-06-04 15:49:47,798 | INFO     | sum of deviations: 24188260094.000004
[2025-06-04 15:50:07] 2025-06-04 15:49:47,798 | INFO     | mean x: 1749048872.5
[2025-06-04 15:50:07] 2025-06-04 15:49:47,798 | INFO     | mean y: 2558767.0408163266
[2025-06-04 15:50:07] 2025-06-04 15:49:47,798 | INFO     | -- intersect: -144973118477.18298
[2025-06-04 15:50:07] 2025-06-04 15:49:47,799 | INFO     | intersect: -144973118477.18298
[2025-06-04 15:50:07] 2025-06-04 15:49:47,799 | INFO     | chi2: 1.8459181004831526
[2025-06-04 15:50:07] 2025-06-04 15:49:47,799 | INFO     | current chi2=1.8459181004831526 (change=0.056531806225303356 %)
[2025-06-04 15:50:07] 2025-06-04 15:49:47,799 | INFO     | right removable region: 97
[2025-06-04 15:50:07] 2025-06-04 15:49:47,799 | INFO     | sum of square deviations: 291817564.5
[2025-06-04 15:50:07] 2025-06-04 15:49:47,800 | INFO     | sum of deviations: 5510893445.499998
[2025-06-04 15:50:07] 2025-06-04 15:49:47,800 | INFO     | mean x: 1749049177.5
[2025-06-04 15:50:07] 2025-06-04 15:49:47,800 | INFO     | mean y: 2627404.275510204
[2025-06-04 15:50:07] 2025-06-04 15:49:47,800 | INFO     | -- intersect: -33027679269.200665
[2025-06-04 15:50:07] 2025-06-04 15:49:47,800 | INFO     | intersect: -33027679269.200665
[2025-06-04 15:50:07] 2025-06-04 15:49:47,801 | INFO     | chi2: 0.09747525327556264
[2025-06-04 15:50:07] 2025-06-04 15:49:47,801 | INFO     | current chi2=0.09747525327556264 (change=94.7224013498343 %)
[2025-06-04 15:50:07] 2025-06-04 15:49:47,801 | INFO     | sum of square deviations: 249388862.0
[2025-06-04 15:50:07] 2025-06-04 15:49:47,801 | INFO     | sum of deviations: 726695257.0
[2025-06-04 15:50:07] 2025-06-04 15:49:47,802 | INFO     | mean x: 1749049330.0
[2025-06-04 15:50:07] 2025-06-04 15:49:47,802 | INFO     | mean y: 2644326.623655914
[2025-06-04 15:50:07] 2025-06-04 15:49:47,802 | INFO     | -- intersect: -5093917894.22656
[2025-06-04 15:50:07] 2025-06-04 15:49:47,802 | INFO     | intersect: -5093917894.22656
[2025-06-04 15:50:07] 2025-06-04 15:49:47,802 | INFO     | chi2: 0.0005555312216927864
[2025-06-04 15:50:07] 2025-06-04 15:49:47,802 | INFO     | current chi2=0.0005555312216927864 (change=99.43007973508692 %)
[2025-06-04 15:50:07] 2025-06-04 15:49:47,802 | INFO     | sum of square deviations: 211285822.0
[2025-06-04 15:50:07] 2025-06-04 15:49:47,803 | INFO     | sum of deviations: 352172611.5
[2025-06-04 15:50:07] 2025-06-04 15:49:47,803 | INFO     | mean x: 1749049482.5
[2025-06-04 15:50:07] 2025-06-04 15:49:47,803 | INFO     | mean y: 2645812.465909091
[2025-06-04 15:50:07] 2025-06-04 15:49:47,803 | INFO     | -- intersect: -2912681482.3998513
[2025-06-04 15:50:07] 2025-06-04 15:49:47,803 | INFO     | intersect: -2912681482.3998513
[2025-06-04 15:50:07] 2025-06-04 15:49:47,804 | INFO     | chi2: 0.00019746836318839013
[2025-06-04 15:50:07] 2025-06-04 15:49:47,804 | INFO     | current chi2=0.00019746836318839013 (change=64.45413768344565 %)
[2025-06-04 15:50:07] 2025-06-04 15:49:47,804 | INFO     | sum of square deviations: 177275882.0
[2025-06-04 15:50:07] 2025-06-04 15:49:47,804 | INFO     | sum of deviations: 314678931.0
[2025-06-04 15:50:07] 2025-06-04 15:49:47,805 | INFO     | mean x: 1749049635.0
[2025-06-04 15:50:07] 2025-06-04 15:49:47,805 | INFO     | mean y: 2645974.7590361447
[2025-06-04 15:50:07] 2025-06-04 15:49:47,805 | INFO     | -- intersect: -3102057627.323396
[2025-06-04 15:50:07] 2025-06-04 15:49:47,805 | INFO     | intersect: -3102057627.323396
[2025-06-04 15:50:07] 2025-06-04 15:49:47,805 | INFO     | chi2: 0.00018761152675106512
[2025-06-04 15:50:07] 2025-06-04 15:49:47,805 | INFO     | current chi2=0.00018761152675106512 (change=4.991602846234828 %)
[2025-06-04 15:50:07] 2025-06-04 15:49:47,805 | INFO     | left removable region: 40
[2025-06-04 15:50:07] 2025-06-04 15:49:47,806 | INFO     | sum of square deviations: 57407588.0
[2025-06-04 15:50:07] 2025-06-04 15:49:47,806 | INFO     | sum of deviations: 137702254.00000003
[2025-06-04 15:50:07] 2025-06-04 15:49:47,806 | INFO     | mean x: 1749050062.0
[2025-06-04 15:50:07] 2025-06-04 15:49:47,806 | INFO     | mean y: 2646511.035087719
[2025-06-04 15:50:07] 2025-06-04 15:49:47,806 | INFO     | -- intersect: -4192759432.4481993
[2025-06-04 15:50:07] 2025-06-04 15:49:47,806 | INFO     | intersect: -4192759432.4481993
[2025-06-04 15:50:07] 2025-06-04 15:49:47,806 | INFO     | chi2: 9.512466172134064e-06
[2025-06-04 15:50:07] 2025-06-04 15:49:47,807 | INFO     | -- intersect: -4192759432.4481993
[2025-06-04 15:50:07] 2025-06-04 15:49:47,807 | INFO     | current memory leak: 2.40 B/s (using 57 data points, chi2=0.00)
[2025-06-04 15:50:07] 2025-06-04 15:49:47,807 | INFO     | ..............................
[2025-06-04 15:50:07] 2025-06-04 15:49:47,807 | INFO     | . Timing measurements:
[2025-06-04 15:50:07] 2025-06-04 15:49:47,807 | INFO     | . get job = 0 s
[2025-06-04 15:50:07] 2025-06-04 15:49:47,808 | INFO     | . initial setup = 1 s
[2025-06-04 15:50:07] 2025-06-04 15:49:47,808 | INFO     | . payload setup = 7 s
[2025-06-04 15:50:07] 2025-06-04 15:49:47,808 | INFO     | . stage-in = 0 s
[2025-06-04 15:50:07] 2025-06-04 15:49:47,808 | INFO     | . payload execution = 6267 s
[2025-06-04 15:50:07] 2025-06-04 15:49:47,808 | INFO     | . stage-out = 1 s
[2025-06-04 15:50:07] 2025-06-04 15:49:47,808 | INFO     | . log creation = 0 s
[2025-06-04 15:50:07] 2025-06-04 15:49:47,808 | INFO     | ..............................
[2025-06-04 15:50:07] 2025-06-04 15:49:47,923 | INFO     | 
[2025-06-04 15:50:07] 2025-06-04 15:49:47,923 | INFO     | job summary report
[2025-06-04 15:50:07] 2025-06-04 15:49:47,923 | INFO     | --------------------------------------------------
[2025-06-04 15:50:07] 2025-06-04 15:49:47,923 | INFO     | PanDA job id: 6678491645
[2025-06-04 15:50:07] 2025-06-04 15:49:47,923 | INFO     | task id: 45006595
[2025-06-04 15:50:07] 2025-06-04 15:49:47,923 | INFO     | errors: (none)
[2025-06-04 15:50:07] 2025-06-04 15:49:47,924 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 15:50:07] 2025-06-04 15:49:47,924 | INFO     | pilot state: finished 
[2025-06-04 15:50:07] 2025-06-04 15:49:47,924 | INFO     | transexitcode: 0
[2025-06-04 15:50:07] 2025-06-04 15:49:47,924 | INFO     | exeerrorcode: 0
[2025-06-04 15:50:07] 2025-06-04 15:49:47,924 | INFO     | exeerrordiag: 
[2025-06-04 15:50:07] 2025-06-04 15:49:47,924 | INFO     | exitcode: 0
[2025-06-04 15:50:07] 2025-06-04 15:49:47,924 | INFO     | exitmsg: OK
[2025-06-04 15:50:07] 2025-06-04 15:49:47,924 | INFO     | cpuconsumptiontime: 40324 s
[2025-06-04 15:50:07] 2025-06-04 15:49:47,924 | INFO     | nevents: 400
[2025-06-04 15:50:07] 2025-06-04 15:49:47,925 | INFO     | neventsw: 0
[2025-06-04 15:50:07] 2025-06-04 15:49:47,925 | INFO     | pid: 1911490
[2025-06-04 15:50:07] 2025-06-04 15:49:47,925 | INFO     | pgrp: 1911490
[2025-06-04 15:50:07] 2025-06-04 15:49:47,925 | INFO     | corecount: 12
[2025-06-04 15:50:07] 2025-06-04 15:49:47,925 | INFO     | event service: False
[2025-06-04 15:50:07] 2025-06-04 15:49:47,925 | INFO     | sizes: {0: 2396462, 1: 2397342, 7: 2397548, 12: 2397576, 6279: 2424155, 6280: 2433144, 6281: 2433328, 6288: 2433498}
[2025-06-04 15:50:07] 2025-06-04 15:49:47,925 | INFO     | --------------------------------------------------
[2025-06-04 15:50:07] 2025-06-04 15:49:47,925 | INFO     | 
[2025-06-04 15:50:07] 2025-06-04 15:49:47,925 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/16
[2025-06-04 15:50:07] 2025-06-04 15:49:47,949 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 15:50:07] 2025-06-04 15:49:47,949 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 15:50:07] 2025-06-04 15:49:47,949 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 15:50:07] 2025-06-04 15:49:47,950 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 15:50:07] 2025-06-04 15:49:47,950 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 15:50:07] 2025-06-04 15:49:47,950 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 15:50:07] 2025-06-04 15:49:47,950 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 15:50:07] 2025-06-04 15:49:47,950 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 15:50:07] 2025-06-04 15:49:47,950 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 15:50:07] 2025-06-04 15:49:47,950 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 15:50:07] 2025-06-04 15:49:47,950 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 15:50:07] 2025-06-04 15:49:47,950 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 15:50:07] 2025-06-04 15:49:47,951 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 15:50:07] 2025-06-04 15:49:47,951 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 15:50:07] 2025-06-04 15:49:47,951 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 15:50:07] 2025-06-04 15:49:47,951 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 15:50:07] 2025-06-04 15:49:47,951 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 15:50:07] 2025-06-04 15:49:47,951 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 15:50:07] 2025-06-04 15:49:47,951 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 15:50:07] 2025-06-04 15:49:47,951 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 15:50:07] 2025-06-04 15:49:47,952 | INFO     | job 6678491645 has completed (purged errors)
[2025-06-04 15:50:07] 2025-06-04 15:49:47,952 | INFO     | overall cleanup function is called
[2025-06-04 15:50:07] 2025-06-04 15:49:48,961 | INFO     | --- collectZombieJob: --- 10, [1911490]
[2025-06-04 15:50:07] 2025-06-04 15:49:48,962 | INFO     | zombie collector waiting for pid 1911490
[2025-06-04 15:50:07] 2025-06-04 15:49:48,962 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 15:50:07] 2025-06-04 15:49:48,962 | INFO     | collected zombie processes
[2025-06-04 15:50:07] 2025-06-04 15:49:48,962 | INFO     | will attempt to kill all subprocesses of pid=1911490
[2025-06-04 15:50:07] 2025-06-04 15:49:49,544 | INFO     | process IDs to be killed: [1911490] (in reverse order)
[2025-06-04 15:50:07] 2025-06-04 15:49:49,782 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 15:50:07] 2025-06-04 15:49:49,783 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 15:50:07] 2025-06-04 15:49:49,802 | INFO     | did not find any defunct processes belonging to 1911490
[2025-06-04 15:50:07] 2025-06-04 15:49:49,819 | INFO     | did not find any defunct processes belonging to 1911490
[2025-06-04 15:50:07] 2025-06-04 15:49:49,819 | INFO     | ready for new job
[2025-06-04 15:50:07] 2025-06-04 15:49:49,819 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 15:50:07] 2025-06-04 15:49:49,821 | INFO     | **************************************
[2025-06-04 15:50:07] 2025-06-04 15:49:49,821 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 15:50:07] 2025-06-04 15:49:49,821 | INFO     | **************************************
[2025-06-04 15:50:07] 2025-06-04 15:49:49,821 | INFO     | 
[2025-06-04 15:50:07] 2025-06-04 15:49:49,831 | INFO     | architecture information:
[2025-06-04 15:50:07] 2025-06-04 15:49:49,831 | INFO     | executing command: cat /etc/os-release
[2025-06-04 15:50:07] 2025-06-04 15:49:49,850 | INFO     | cat /etc/os-release:
[2025-06-04 15:50:07] NAME="CentOS Linux"
[2025-06-04 15:50:07] VERSION="7 (Core)"
[2025-06-04 15:50:07] ID="centos"
[2025-06-04 15:50:07] ID_LIKE="rhel fedora"
[2025-06-04 15:50:07] VERSION_ID="7"
[2025-06-04 15:50:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 15:50:07] ANSI_COLOR="0;31"
[2025-06-04 15:50:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 15:50:07] HOME_URL="https://www.centos.org/"
[2025-06-04 15:50:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 15:50:07] 
[2025-06-04 15:50:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 15:50:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 15:50:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 15:50:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 15:50:07] 
[2025-06-04 15:50:07] 2025-06-04 15:49:49,850 | INFO     | **************************************
[2025-06-04 15:50:07] 2025-06-04 15:49:50,354 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/16
[2025-06-04 15:50:07] 2025-06-04 15:49:50,377 | INFO     | sufficient remaining disk space (315744059392 B)
[2025-06-04 15:50:07] 2025-06-04 15:49:50,378 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 15:50:07] 2025-06-04 15:49:50,378 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 15:50:07] 2025-06-04 15:49:50,378 | INFO     | update_server=False
[2025-06-04 15:50:07] 2025-06-04 15:49:50,378 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 15:50:07] 2025-06-04 15:49:50,508 | INFO     | all job control threads have been joined
[2025-06-04 15:50:07] 2025-06-04 15:49:50,773 | INFO     | all payload control threads have been joined
[2025-06-04 15:50:07] 2025-06-04 15:49:50,792 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 15:50:07] 2025-06-04 15:49:50,792 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 15:50:07] 2025-06-04 15:49:50,793 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:50:07] 2025-06-04 15:49:50,793 | INFO     | will abort loop
[2025-06-04 15:50:07] 2025-06-04 15:49:50,877 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 15:50:07] 2025-06-04 15:49:50,881 | INFO     | all data control threads have been joined
[2025-06-04 15:50:07] 2025-06-04 15:49:50,903 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 15:50:07] 2025-06-04 15:49:50,903 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 15:50:07] 2025-06-04 15:49:50,903 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 15:50:07] 2025-06-04 15:49:51,386 | INFO     | [job] retrieve thread has finished
[2025-06-04 15:50:07] 2025-06-04 15:49:51,510 | INFO     | [job] control thread has finished
[2025-06-04 15:50:07] 2025-06-04 15:49:51,689 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 15:50:07] 2025-06-04 15:49:51,779 | INFO     | [payload] control thread has finished
[2025-06-04 15:50:07] 2025-06-04 15:49:51,802 | INFO     | [job] job monitor thread has finished
[2025-06-04 15:50:07] 2025-06-04 15:49:51,885 | INFO     | [data] control thread has finished
[2025-06-04 15:50:07] 2025-06-04 15:49:51,963 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 15:50:07] 2025-06-04 15:49:52,017 | INFO     | [payload] failed_post thread has finished
[2025-06-04 15:50:07] 2025-06-04 15:49:52,133 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 15:50:07] 2025-06-04 15:49:52,469 | INFO     | [job] validate thread has finished
[2025-06-04 15:50:07] 2025-06-04 15:49:52,630 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 15:50:07] 2025-06-04 15:49:52,866 | INFO     | [data] copytool_in thread has finished
[2025-06-04 15:50:07] 2025-06-04 15:49:52,882 | INFO     | [data] copytool_out thread has finished
[2025-06-04 15:50:07] 2025-06-04 15:49:52,918 | INFO     | [payload] validate_post thread has finished
[2025-06-04 15:50:07] 2025-06-04 15:49:52,929 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:50:07] 2025-06-04 15:49:53,934 | INFO     | [job] queue monitor thread has finished
[2025-06-04 15:50:07] 2025-06-04 15:49:55,693 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 15:50:07] 2025-06-04 15:50:00,522 | INFO     | job.realtimelogging is not enabled
[2025-06-04 15:50:07] 2025-06-04 15:50:01,525 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 15:50:07] 2025-06-04 15:50:01,733 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139680769689408)>', '<ExcThread(monitor, started 139680112699136)>']
[2025-06-04 15:50:07] 2025-06-04 15:50:01,949 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 15:50:07] 2025-06-04 15:50:01,950 | INFO     | [monitor] control thread has ended
[2025-06-04 15:50:07] 2025-06-04 15:50:06,757 | INFO     | all workflow threads have been joined
[2025-06-04 15:50:07] 2025-06-04 15:50:06,758 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 15:50:07] 2025-06-04 15:50:06,758 | INFO     | traces error code: 0
[2025-06-04 15:50:07] 2025-06-04 15:50:06,758 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 15:50:07] 2025-06-04 15:50:06,917 [wrapper] ==== pilot stdout END ====
[2025-06-04 15:50:07] 2025-06-04 15:50:06,921 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 15:50:07] 2025-06-04 15:50:06,924 [wrapper] pilotpid: 1891416
[2025-06-04 15:50:07] 2025-06-04 15:50:06,928 [wrapper] Pilot exit status: 0
[2025-06-04 15:50:07] 2025-06-04 15:50:06,941 [wrapper] pandaids: 6678491645
[2025-06-04 15:50:07] 2025-06-04 15:50:07,062 [wrapper] cleanup supervisor_pilot 2257290 1891417
[2025-06-04 15:50:07] 2025-06-04 15:50:07,070 [wrapper] Test setup, not cleaning
[2025-06-04 15:50:07] 2025-06-04 15:50:07,073 [wrapper] apfmon messages muted
[2025-06-04 15:50:07] 2025-06-04 15:50:07,077 [wrapper] ==== wrapper stdout END ====
[2025-06-04 15:50:07] 2025-06-04 15:50:07,081 [wrapper] ==== wrapper stderr END ====
[2025-06-04 15:50:07]  *** Error codes and diagnostics ***
[2025-06-04 15:50:07]     "exeErrorCode": 0,
[2025-06-04 15:50:07]     "exeErrorDiag": "",
[2025-06-04 15:50:07]     "pilotErrorCode": 0,
[2025-06-04 15:50:07]     "pilotErrorDiag": "",
[2025-06-04 15:50:07]  *** Listing of results directory ***
[2025-06-04 15:50:07] total 386008
[2025-06-04 15:50:07] -rw-r--r-- 1 boinc boinc    495897 Jun  4 07:34 pilot3.tar.gz
[2025-06-04 15:50:07] -rwx------ 1 boinc boinc     37140 Jun  4 07:46 runpilot2-wrapper.sh
[2025-06-04 15:50:07] -rw-r--r-- 1 boinc boinc      5111 Jun  4 07:46 queuedata.json
[2025-06-04 15:50:07] -rw-rw-r-- 1 boinc boinc       100 Jun  4 14:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 15:50:07] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 14:04 run_atlas
[2025-06-04 15:50:07] -rw-rw-r-- 1 boinc boinc       105 Jun  4 14:04 job.xml
[2025-06-04 15:50:07] -rw-rw-r-- 1 boinc boinc      6951 Jun  4 14:04 init_data.xml
[2025-06-04 15:50:07] -rw-r--r-- 2 boinc boinc 214008482 Jun  4 14:04 EVNT.45006593._000818.pool.root.1
[2025-06-04 15:50:07] -rw-r--r-- 2 boinc boinc     15093 Jun  4 14:04 start_atlas.sh
[2025-06-04 15:50:07] drwxrwx--x 2 boinc boinc      4096 Jun  4 14:04 shared
[2025-06-04 15:50:07] -rw-r--r-- 2 boinc boinc    508884 Jun  4 14:04 input.tar.gz
[2025-06-04 15:50:07] -rw-rw-r-- 1 boinc boinc         0 Jun  4 14:04 boinc_lockfile
[2025-06-04 15:50:07] -rw-rw-r-- 1 boinc boinc      2524 Jun  4 14:04 pandaJob.out
[2025-06-04 15:50:07] -rw------- 1 boinc boinc    986819 Jun  4 14:04 agis_schedconf.cvmfs.json
[2025-06-04 15:50:07] -rw------- 1 boinc boinc   1598969 Jun  4 14:04 agis_ddmendpoints.agis.ALL.json
[2025-06-04 15:50:07] drwx------ 4 boinc boinc      4096 Jun  4 14:04 pilot3
[2025-06-04 15:50:07] -rw------- 1 boinc boinc 175560685 Jun  4 15:49 HITS.45006595._055379.pool.root.1
[2025-06-04 15:50:07] -rw-rw-r-- 1 boinc boinc       530 Jun  4 15:49 boinc_task_state.xml
[2025-06-04 15:50:07] -rw------- 1 boinc boinc      1022 Jun  4 15:49 memory_monitor_summary.json
[2025-06-04 15:50:07] -rw------- 1 boinc boinc    382529 Jun  4 15:49 log.45006595._055379.job.log.tgz.1
[2025-06-04 15:50:07] -rw------- 1 boinc boinc        95 Jun  4 15:49 pilot_heartbeat.json
[2025-06-04 15:50:07] -rw------- 1 boinc boinc      7644 Jun  4 15:49 heartbeat.json
[2025-06-04 15:50:07] -rw-rw-r-- 1 boinc boinc      8192 Jun  4 15:50 boinc_mmap_file
[2025-06-04 15:50:07] -rw-rw-r-- 1 boinc boinc        27 Jun  4 15:50 wrapper_checkpoint.txt
[2025-06-04 15:50:07] -rw------- 1 boinc boinc      4636 Jun  4 15:50 pilotlog.txt
[2025-06-04 15:50:07] -rw------- 1 boinc boinc    549338 Jun  4 15:50 log.45006595._055379.job.log.1
[2025-06-04 15:50:07] -rw------- 1 boinc boinc       357 Jun  4 15:50 output.list
[2025-06-04 15:50:07] -rw-rw-r-- 1 boinc boinc       620 Jun  4 15:50 runtime_log
[2025-06-04 15:50:07] -rw------- 1 boinc boinc    952320 Jun  4 15:50 result.tar.gz
[2025-06-04 15:50:07] -rw------- 1 boinc boinc       651 Jun  4 15:50 wksNDmG0xg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoinKDmbS1gDm.diag
[2025-06-04 15:50:07] -rw-rw-r-- 1 boinc boinc      8977 Jun  4 15:50 runtime_log.err
[2025-06-04 15:50:07] -rw-rw-r-- 1 boinc boinc     20931 Jun  4 15:50 stderr.txt
[2025-06-04 15:50:07] HITS file was successfully produced:
[2025-06-04 15:50:07] -rw------- 1 boinc boinc 175560685 Jun  4 15:49 shared/HITS.pool.root.1
[2025-06-04 15:50:07]  *** Contents of shared directory: ***
[2025-06-04 15:50:07] total 381900
[2025-06-04 15:50:07] -rw-r--r-- 2 boinc boinc 214008482 Jun  4 14:04 ATLAS.root_0
[2025-06-04 15:50:07] -rw-r--r-- 2 boinc boinc     15093 Jun  4 14:04 start_atlas.sh
[2025-06-04 15:50:07] -rw-r--r-- 2 boinc boinc    508884 Jun  4 14:04 input.tar.gz
[2025-06-04 15:50:07] -rw------- 1 boinc boinc 175560685 Jun  4 15:49 HITS.pool.root.1
[2025-06-04 15:50:07] -rw------- 1 boinc boinc    952320 Jun  4 15:50 result.tar.gz
15:50:08 (1875244): run_atlas exited; CPU time 40623.923602
15:50:08 (1875244): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN