Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
14:07:12 (1943207): wrapper (7.7.26015): starting
14:07:12 (1943207): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 14:07:12] Arguments: --nthreads 12
[2025-06-04 14:07:12] Threads: 12
[2025-06-04 14:07:12] Checking for CVMFS
[2025-06-04 14:07:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 14:07:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 14:07:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 14:07:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 14:07:13] 2.12.7.0 29207 2008 76232 146781 0 187 2028404 4096000 15295 130560 17 26414126 99.999 473789 145 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 14:07:13] CVMFS is ok
[2025-06-04 14:07:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 14:07:13] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 14:07:13] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 14:07:13] Further information can be found at the LHC@home message board.
[2025-06-04 14:07:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 14:07:13] Checking for apptainer binary...
[2025-06-04 14:07:13] apptainer is not installed, using version from CVMFS
[2025-06-04 14:07:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 14:07:13] epyc7v12
[2025-06-04 14:07:13] apptainer works
[2025-06-04 14:07:13] Set ATHENA_PROC_NUMBER=12
[2025-06-04 14:07:13] Set ATHENA_CORE_NUMBER=12
[2025-06-04 14:07:13] Starting ATLAS job with PandaID=6666762817
[2025-06-04 14:07:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:21:16]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:21:16] 2025-06-04 17:20:58,134 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 17:21:16] 2025-06-04 17:20:58,134 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/14/PanDA_Pilot-6666762817/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:21:16] 2025-06-04 17:20:58,135 | INFO     | extracted standard info from prmon json
[2025-06-04 17:21:16] 2025-06-04 17:20:58,135 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 17:21:16] 2025-06-04 17:20:58,135 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:21:16] 2025-06-04 17:20:58,136 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:21:16] 2025-06-04 17:20:58,136 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:21:16] 2025-06-04 17:20:58,144 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:21:16] 2025-06-04 17:20:58,144 | INFO     | sum of square deviations: 2093754774.2857094
[2025-06-04 17:21:16] 2025-06-04 17:20:58,154 | INFO     | sum of deviations: 37579328545.71427
[2025-06-04 17:21:16] 2025-06-04 17:20:58,154 | INFO     | mean x: 1749051816.2380953
[2025-06-04 17:21:16] 2025-06-04 17:20:58,154 | INFO     | mean y: 2593841.984126984
[2025-06-04 17:21:16] 2025-06-04 17:20:58,154 | INFO     | -- intersect: -31389904292.527836
[2025-06-04 17:21:16] 2025-06-04 17:20:58,154 | INFO     | intersect: -31389904292.527836
[2025-06-04 17:21:16] 2025-06-04 17:20:58,155 | INFO     | chi2: 3.6654579931945888
[2025-06-04 17:21:16] 2025-06-04 17:20:58,155 | INFO     | sum of square deviations: 1931945196.4130414
[2025-06-04 17:21:16] 2025-06-04 17:20:58,156 | INFO     | sum of deviations: 61367584004.49999
[2025-06-04 17:21:16] 2025-06-04 17:20:58,156 | INFO     | mean x: 1749051663.7282608
[2025-06-04 17:21:16] 2025-06-04 17:20:58,157 | INFO     | mean y: 2615878.75
[2025-06-04 17:21:16] 2025-06-04 17:20:58,157 | INFO     | -- intersect: -55555417082.7123
[2025-06-04 17:21:16] 2025-06-04 17:20:58,157 | INFO     | intersect: -55555417082.7123
[2025-06-04 17:21:16] 2025-06-04 17:20:58,157 | INFO     | chi2: 2.2206575631544374
[2025-06-04 17:21:16] 2025-06-04 17:20:58,157 | INFO     | current chi2=2.2206575631544374 (change=39.416641323474884 %)
[2025-06-04 17:21:16] 2025-06-04 17:20:58,166 | INFO     | sum of square deviations: 1778693674.5027974
[2025-06-04 17:21:16] 2025-06-04 17:20:58,167 | INFO     | sum of deviations: 59589316224.50844
[2025-06-04 17:21:16] 2025-06-04 17:20:58,167 | INFO     | mean x: 1749051511.2178771
[2025-06-04 17:21:16] 2025-06-04 17:20:58,167 | INFO     | mean y: 2614108.653631285
[2025-06-04 17:21:16] 2025-06-04 17:20:58,167 | INFO     | -- intersect: -58593638348.39221
[2025-06-04 17:21:16] 2025-06-04 17:20:58,167 | INFO     | intersect: -58593638348.39221
[2025-06-04 17:21:16] 2025-06-04 17:20:58,168 | INFO     | chi2: 2.219472885484067
[2025-06-04 17:21:16] 2025-06-04 17:20:58,168 | INFO     | current chi2=2.219472885484067 (change=0.05334805735142282 %)
[2025-06-04 17:21:16] 2025-06-04 17:20:58,168 | INFO     | right removable region: 178
[2025-06-04 17:21:16] 2025-06-04 17:20:58,168 | INFO     | sum of square deviations: 1931951968.9945643
[2025-06-04 17:21:16] 2025-06-04 17:20:58,178 | INFO     | sum of deviations: -5075609080.521744
[2025-06-04 17:21:16] 2025-06-04 17:20:58,178 | INFO     | mean x: 1749051968.7445652
[2025-06-04 17:21:16] 2025-06-04 17:20:58,178 | INFO     | mean y: 2633781.4782608696
[2025-06-04 17:21:16] 2025-06-04 17:20:58,178 | INFO     | -- intersect: 4597729413.945988
[2025-06-04 17:21:16] 2025-06-04 17:20:58,178 | INFO     | intersect: 4597729413.945988
[2025-06-04 17:21:16] 2025-06-04 17:20:58,179 | INFO     | chi2: 1.6817200186996644
[2025-06-04 17:21:16] 2025-06-04 17:20:58,179 | INFO     | current chi2=1.6817200186996644 (change=54.11978470843203 %)
[2025-06-04 17:21:16] 2025-06-04 17:20:58,179 | INFO     | sum of square deviations: 1778707463.6871445
[2025-06-04 17:21:16] 2025-06-04 17:20:58,180 | INFO     | sum of deviations: -19419894987.022346
[2025-06-04 17:21:16] 2025-06-04 17:20:58,180 | INFO     | mean x: 1749052121.2513967
[2025-06-04 17:21:16] 2025-06-04 17:20:58,181 | INFO     | mean y: 2648054.089385475
[2025-06-04 17:21:16] 2025-06-04 17:20:58,181 | INFO     | -- intersect: 19098766564.280293
[2025-06-04 17:21:16] 2025-06-04 17:20:58,181 | INFO     | intersect: 19098766564.280293
[2025-06-04 17:21:16] 2025-06-04 17:20:58,181 | INFO     | chi2: 1.4935273287904343
[2025-06-04 17:21:16] 2025-06-04 17:20:58,181 | INFO     | current chi2=1.4935273287904343 (change=11.190488774388498 %)
[2025-06-04 17:21:16] 2025-06-04 17:20:58,194 | INFO     | left removable region: 20
[2025-06-04 17:21:16] 2025-06-04 17:20:58,194 | INFO     | sum of square deviations: 1223267960.8354397
[2025-06-04 17:21:16] 2025-06-04 17:20:58,195 | INFO     | sum of deviations: 961219217.6455692
[2025-06-04 17:21:16] 2025-06-04 17:20:58,195 | INFO     | mean x: 1749052090.734177
[2025-06-04 17:21:16] 2025-06-04 17:20:58,195 | INFO     | mean y: 2676881.158227848
[2025-06-04 17:21:16] 2025-06-04 17:20:58,195 | INFO     | -- intersect: -1371692869.4634182
[2025-06-04 17:21:16] 2025-06-04 17:20:58,195 | INFO     | intersect: -1371692869.4634182
[2025-06-04 17:21:16] 2025-06-04 17:20:58,196 | INFO     | chi2: 0.00035682444715343374
[2025-06-04 17:21:16] 2025-06-04 17:20:58,196 | INFO     | -- intersect: -1371692869.4634182
[2025-06-04 17:21:16] 2025-06-04 17:20:58,196 | INFO     | current memory leak: 0.79 B/s (using 158 data points, chi2=0.00)
[2025-06-04 17:21:16] 2025-06-04 17:20:58,197 | INFO     | ..............................
[2025-06-04 17:21:16] 2025-06-04 17:20:58,197 | INFO     | . Timing measurements:
[2025-06-04 17:21:16] 2025-06-04 17:20:58,197 | INFO     | . get job = 0 s
[2025-06-04 17:21:16] 2025-06-04 17:20:58,197 | INFO     | . initial setup = 1 s
[2025-06-04 17:21:16] 2025-06-04 17:20:58,197 | INFO     | . payload setup = 8 s
[2025-06-04 17:21:16] 2025-06-04 17:20:58,197 | INFO     | . stage-in = 0 s
[2025-06-04 17:21:16] 2025-06-04 17:20:58,197 | INFO     | . payload execution = 11518 s
[2025-06-04 17:21:16] 2025-06-04 17:20:58,197 | INFO     | . stage-out = 2 s
[2025-06-04 17:21:16] 2025-06-04 17:20:58,198 | INFO     | . log creation = 0 s
[2025-06-04 17:21:16] 2025-06-04 17:20:58,198 | INFO     | ..............................
[2025-06-04 17:21:16] 2025-06-04 17:20:58,825 | INFO     | 
[2025-06-04 17:21:16] 2025-06-04 17:20:58,826 | INFO     | job summary report
[2025-06-04 17:21:16] 2025-06-04 17:20:58,826 | INFO     | --------------------------------------------------
[2025-06-04 17:21:16] 2025-06-04 17:20:58,826 | INFO     | PanDA job id: 6666762817
[2025-06-04 17:21:16] 2025-06-04 17:20:58,826 | INFO     | task id: 44871837
[2025-06-04 17:21:16] 2025-06-04 17:20:58,826 | INFO     | errors: (none)
[2025-06-04 17:21:16] 2025-06-04 17:20:58,826 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:21:16] 2025-06-04 17:20:58,826 | INFO     | pilot state: finished 
[2025-06-04 17:21:16] 2025-06-04 17:20:58,826 | INFO     | transexitcode: 0
[2025-06-04 17:21:16] 2025-06-04 17:20:58,826 | INFO     | exeerrorcode: 0
[2025-06-04 17:21:16] 2025-06-04 17:20:58,826 | INFO     | exeerrordiag: 
[2025-06-04 17:21:16] 2025-06-04 17:20:58,827 | INFO     | exitcode: 0
[2025-06-04 17:21:16] 2025-06-04 17:20:58,827 | INFO     | exitmsg: OK
[2025-06-04 17:21:16] 2025-06-04 17:20:58,827 | INFO     | cpuconsumptiontime: 57184 s
[2025-06-04 17:21:16] 2025-06-04 17:20:58,827 | INFO     | nevents: 400
[2025-06-04 17:21:16] 2025-06-04 17:20:58,827 | INFO     | neventsw: 0
[2025-06-04 17:21:16] 2025-06-04 17:20:58,827 | INFO     | pid: 1972776
[2025-06-04 17:21:16] 2025-06-04 17:20:58,827 | INFO     | pgrp: 1972776
[2025-06-04 17:21:16] 2025-06-04 17:20:58,827 | INFO     | corecount: 12
[2025-06-04 17:21:16] 2025-06-04 17:20:58,827 | INFO     | event service: False
[2025-06-04 17:21:16] 2025-06-04 17:20:58,827 | INFO     | sizes: {0: 2396564, 1: 2397444, 6: 2397650, 12: 2397678, 11531: 2426578, 11534: 2435567, 11537: 2435751, 11590: 2435921}
[2025-06-04 17:21:16] 2025-06-04 17:20:58,827 | INFO     | --------------------------------------------------
[2025-06-04 17:21:16] 2025-06-04 17:20:58,827 | INFO     | 
[2025-06-04 17:21:16] 2025-06-04 17:20:58,828 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/14
[2025-06-04 17:21:16] 2025-06-04 17:20:58,974 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:21:16] 2025-06-04 17:20:58,974 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:21:16] 2025-06-04 17:20:58,974 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:21:16] 2025-06-04 17:20:58,974 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:21:16] 2025-06-04 17:20:58,974 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:21:16] 2025-06-04 17:20:58,975 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:21:16] 2025-06-04 17:20:58,975 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:21:16] 2025-06-04 17:20:58,975 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:21:16] 2025-06-04 17:20:58,975 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:21:16] 2025-06-04 17:20:58,975 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:21:16] 2025-06-04 17:20:58,975 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:21:16] 2025-06-04 17:20:58,975 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:21:16] 2025-06-04 17:20:58,975 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:21:16] 2025-06-04 17:20:58,975 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:21:16] 2025-06-04 17:20:58,975 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:21:16] 2025-06-04 17:20:58,976 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:21:16] 2025-06-04 17:20:58,976 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:21:16] 2025-06-04 17:20:58,976 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:21:16] 2025-06-04 17:20:58,976 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:21:16] 2025-06-04 17:20:58,976 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:21:16] 2025-06-04 17:20:58,976 | INFO     | job 6666762817 has completed (purged errors)
[2025-06-04 17:21:16] 2025-06-04 17:20:58,976 | INFO     | overall cleanup function is called
[2025-06-04 17:21:16] 2025-06-04 17:20:59,993 | INFO     | --- collectZombieJob: --- 10, [1972776]
[2025-06-04 17:21:16] 2025-06-04 17:20:59,994 | INFO     | zombie collector waiting for pid 1972776
[2025-06-04 17:21:16] 2025-06-04 17:20:59,994 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:21:16] 2025-06-04 17:20:59,994 | INFO     | collected zombie processes
[2025-06-04 17:21:16] 2025-06-04 17:20:59,994 | INFO     | will attempt to kill all subprocesses of pid=1972776
[2025-06-04 17:21:16] 2025-06-04 17:21:01,466 | INFO     | process IDs to be killed: [1972776] (in reverse order)
[2025-06-04 17:21:16] 2025-06-04 17:21:04,263 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:21:16] 2025-06-04 17:21:04,263 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:21:16] 2025-06-04 17:21:04,310 | INFO     | did not find any defunct processes belonging to 1972776
[2025-06-04 17:21:16] 2025-06-04 17:21:04,339 | INFO     | did not find any defunct processes belonging to 1972776
[2025-06-04 17:21:16] 2025-06-04 17:21:04,340 | INFO     | ready for new job
[2025-06-04 17:21:16] 2025-06-04 17:21:04,340 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:21:16] 2025-06-04 17:21:04,342 | INFO     | **************************************
[2025-06-04 17:21:16] 2025-06-04 17:21:04,342 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:21:16] 2025-06-04 17:21:04,342 | INFO     | **************************************
[2025-06-04 17:21:16] 2025-06-04 17:21:04,342 | INFO     | 
[2025-06-04 17:21:16] 2025-06-04 17:21:04,379 | INFO     | architecture information:
[2025-06-04 17:21:16] 2025-06-04 17:21:04,385 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:21:16] 2025-06-04 17:21:04,506 | INFO     | cat /etc/os-release:
[2025-06-04 17:21:16] NAME="CentOS Linux"
[2025-06-04 17:21:16] VERSION="7 (Core)"
[2025-06-04 17:21:16] ID="centos"
[2025-06-04 17:21:16] ID_LIKE="rhel fedora"
[2025-06-04 17:21:16] VERSION_ID="7"
[2025-06-04 17:21:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:21:16] ANSI_COLOR="0;31"
[2025-06-04 17:21:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:21:16] HOME_URL="https://www.centos.org/"
[2025-06-04 17:21:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:21:16] 
[2025-06-04 17:21:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:21:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:21:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:21:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:21:16] 
[2025-06-04 17:21:16] 2025-06-04 17:21:04,506 | INFO     | **************************************
[2025-06-04 17:21:16] 2025-06-04 17:21:05,010 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/14
[2025-06-04 17:21:16] 2025-06-04 17:21:05,079 | INFO     | sufficient remaining disk space (314031734784 B)
[2025-06-04 17:21:16] 2025-06-04 17:21:05,080 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:21:16] 2025-06-04 17:21:05,080 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:21:16] 2025-06-04 17:21:05,081 | INFO     | update_server=False
[2025-06-04 17:21:16] 2025-06-04 17:21:05,081 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:21:16] 2025-06-04 17:21:05,125 | INFO     | all payload control threads have been joined
[2025-06-04 17:21:16] 2025-06-04 17:21:05,278 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:21:16] 2025-06-04 17:21:05,278 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:21:16] 2025-06-04 17:21:05,278 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:21:16] 2025-06-04 17:21:05,400 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:21:16] 2025-06-04 17:21:05,520 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:21:16] 2025-06-04 17:21:05,593 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:21:16] 2025-06-04 17:21:05,594 | INFO     | aborting loop
[2025-06-04 17:21:16] 2025-06-04 17:21:05,737 | INFO     | all job control threads have been joined
[2025-06-04 17:21:16] 2025-06-04 17:21:06,041 | INFO     | all data control threads have been joined
[2025-06-04 17:21:16] 2025-06-04 17:21:06,086 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:21:16] 2025-06-04 17:21:06,094 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:21:16] 2025-06-04 17:21:06,130 | INFO     | [payload] control thread has finished
[2025-06-04 17:21:16] 2025-06-04 17:21:06,506 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:21:16] 2025-06-04 17:21:06,598 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:21:16] 2025-06-04 17:21:06,746 | INFO     | [job] control thread has finished
[2025-06-04 17:21:16] 2025-06-04 17:21:07,046 | INFO     | [data] control thread has finished
[2025-06-04 17:21:16] 2025-06-04 17:21:07,382 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:21:16] 2025-06-04 17:21:07,398 | INFO     | [job] validate thread has finished
[2025-06-04 17:21:16] 2025-06-04 17:21:07,409 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:21:16] 2025-06-04 17:21:07,410 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:21:16] 2025-06-04 17:21:07,421 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:21:16] 2025-06-04 17:21:07,498 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:21:16] 2025-06-04 17:21:07,522 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:21:16] 2025-06-04 17:21:07,601 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:21:16] 2025-06-04 17:21:08,417 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:21:16] 2025-06-04 17:21:09,526 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:21:16] 2025-06-04 17:21:09,782 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140680953812800)>', '<ExcThread(monitor, started 140680370317056)>']
[2025-06-04 17:21:16] 2025-06-04 17:21:10,301 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:21:16] 2025-06-04 17:21:10,302 | INFO     | [monitor] control thread has ended
[2025-06-04 17:21:16] 2025-06-04 17:21:14,805 | INFO     | all workflow threads have been joined
[2025-06-04 17:21:16] 2025-06-04 17:21:14,806 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:21:16] 2025-06-04 17:21:14,806 | INFO     | traces error code: 0
[2025-06-04 17:21:16] 2025-06-04 17:21:14,806 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:21:16] 2025-06-04 17:21:15,622 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:21:16] 2025-06-04 17:21:15,638 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:21:16] 2025-06-04 17:21:15,652 [wrapper] pilotpid: 1953254
[2025-06-04 17:21:16] 2025-06-04 17:21:15,698 [wrapper] Pilot exit status: 0
[2025-06-04 17:21:16] 2025-06-04 17:21:15,823 [wrapper] pandaids: 6666762817
[2025-06-04 17:21:16] 2025-06-04 17:21:16,137 [wrapper] cleanup supervisor_pilot 3173130 1953255
[2025-06-04 17:21:16] 2025-06-04 17:21:16,166 [wrapper] Test setup, not cleaning
[2025-06-04 17:21:16] 2025-06-04 17:21:16,206 [wrapper] apfmon messages muted
[2025-06-04 17:21:16] 2025-06-04 17:21:16,223 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:21:16] 2025-06-04 17:21:16,250 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:21:16]  *** Error codes and diagnostics ***
[2025-06-04 17:21:17]     "exeErrorCode": 0,
[2025-06-04 17:21:17]     "exeErrorDiag": "",
[2025-06-04 17:21:17]     "pilotErrorCode": 0,
[2025-06-04 17:21:17]     "pilotErrorDiag": "",
[2025-06-04 17:21:17]  *** Listing of results directory ***
[2025-06-04 17:21:17] total 414800
[2025-06-04 17:21:17] -rw-r--r-- 1 boinc boinc    495897 May 27 03:05 pilot3.tar.gz
[2025-06-04 17:21:17] -rwx------ 1 boinc boinc     37140 May 27 04:09 runpilot2-wrapper.sh
[2025-06-04 17:21:17] -rw-r--r-- 1 boinc boinc      5111 May 27 04:09 queuedata.json
[2025-06-04 17:21:17] -rw-rw-r-- 1 boinc boinc       100 Jun  4 14:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:21:17] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 14:07 run_atlas
[2025-06-04 17:21:17] -rw-rw-r-- 1 boinc boinc       105 Jun  4 14:07 job.xml
[2025-06-04 17:21:17] -rw-rw-r-- 1 boinc boinc      6951 Jun  4 14:07 init_data.xml
[2025-06-04 17:21:17] -rw-r--r-- 2 boinc boinc 222595131 Jun  4 14:07 EVNT.44871834._002441.pool.root.1
[2025-06-04 17:21:17] -rw-r--r-- 2 boinc boinc     15093 Jun  4 14:07 start_atlas.sh
[2025-06-04 17:21:17] drwxrwx--x 2 boinc boinc      4096 Jun  4 14:07 shared
[2025-06-04 17:21:17] -rw-r--r-- 2 boinc boinc    508880 Jun  4 14:07 input.tar.gz
[2025-06-04 17:21:17] -rw-rw-r-- 1 boinc boinc         0 Jun  4 14:07 boinc_lockfile
[2025-06-04 17:21:17] -rw-rw-r-- 1 boinc boinc      2559 Jun  4 14:07 pandaJob.out
[2025-06-04 17:21:17] -rw------- 1 boinc boinc    986819 Jun  4 14:07 agis_schedconf.cvmfs.json
[2025-06-04 17:21:17] drwx------ 4 boinc boinc      4096 Jun  4 14:07 pilot3
[2025-06-04 17:21:17] -rw------- 1 boinc boinc 195578346 Jun  4 17:16 HITS.44871837._061873.pool.root.1
[2025-06-04 17:21:17] -rw-rw-r-- 1 boinc boinc       531 Jun  4 17:17 boinc_task_state.xml
[2025-06-04 17:21:17] -rw------- 1 boinc boinc      1025 Jun  4 17:19 memory_monitor_summary.json
[2025-06-04 17:21:17] -rw------- 1 boinc boinc   1598969 Jun  4 17:19 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:21:17] -rw------- 1 boinc boinc    414568 Jun  4 17:20 log.44871837._061873.job.log.tgz.1
[2025-06-04 17:21:17] -rw------- 1 boinc boinc        95 Jun  4 17:20 pilot_heartbeat.json
[2025-06-04 17:21:17] -rw------- 1 boinc boinc      7653 Jun  4 17:20 heartbeat.json
[2025-06-04 17:21:17] -rw-rw-r-- 1 boinc boinc      8192 Jun  4 17:21 boinc_mmap_file
[2025-06-04 17:21:17] -rw-rw-r-- 1 boinc boinc        28 Jun  4 17:21 wrapper_checkpoint.txt
[2025-06-04 17:21:17] -rw------- 1 boinc boinc      4378 Jun  4 17:21 pilotlog.txt
[2025-06-04 17:21:17] -rw------- 1 boinc boinc    960027 Jun  4 17:21 log.44871837._061873.job.log.1
[2025-06-04 17:21:17] -rw------- 1 boinc boinc       357 Jun  4 17:21 output.list
[2025-06-04 17:21:17] -rw-rw-r-- 1 boinc boinc       620 Jun  4 17:21 runtime_log
[2025-06-04 17:21:17] -rw------- 1 boinc boinc   1392640 Jun  4 17:21 result.tar.gz
[2025-06-04 17:21:17] -rw-rw-r-- 1 boinc boinc      8978 Jun  4 17:21 runtime_log.err
[2025-06-04 17:21:17] -rw------- 1 boinc boinc       655 Jun  4 17:21 GJrNDmGo0d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlVYKDmVqJ6Pn.diag
[2025-06-04 17:21:17] -rw-rw-r-- 1 boinc boinc     21075 Jun  4 17:21 stderr.txt
[2025-06-04 17:21:17] HITS file was successfully produced:
[2025-06-04 17:21:17] -rw------- 1 boinc boinc 195578346 Jun  4 17:16 shared/HITS.pool.root.1
[2025-06-04 17:21:17]  *** Contents of shared directory: ***
[2025-06-04 17:21:17] total 410260
[2025-06-04 17:21:17] -rw-r--r-- 2 boinc boinc 222595131 Jun  4 14:07 ATLAS.root_0
[2025-06-04 17:21:17] -rw-r--r-- 2 boinc boinc     15093 Jun  4 14:07 start_atlas.sh
[2025-06-04 17:21:17] -rw-r--r-- 2 boinc boinc    508880 Jun  4 14:07 input.tar.gz
[2025-06-04 17:21:17] -rw------- 1 boinc boinc 195578346 Jun  4 17:16 HITS.pool.root.1
[2025-06-04 17:21:17] -rw------- 1 boinc boinc   1392640 Jun  4 17:21 result.tar.gz
17:21:18 (1943207): run_atlas exited; CPU time 57810.025483
17:21:18 (1943207): called boinc_finish(0)

</stderr_txt>
]]>

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