Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:32:44 (30259): wrapper (7.7.26015): starting
08:32:44 (30259): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:32:44] Arguments: --nthreads 8
[2025-06-04 08:32:44] Threads: 8
[2025-06-04 08:32:44] Checking for CVMFS
[2025-06-04 08:32:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:32:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:32:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:32:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:32:44] 2.11.2.0 2931 35638 76512 146780 3 57 17932099 20275200 1 130560 0 11487157 99.976 6625242 8091 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 08:32:44] CVMFS is ok
[2025-06-04 08:32:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:32:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:32:44] Further information can be found at the LHC@home message board.
[2025-06-04 08:32:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:32:44] Checking for apptainer binary...
[2025-06-04 08:32:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:32:44] Running /usr/bin/apptainer --version
[2025-06-04 08:32:44] apptainer version 1.3.2-1.el7
[2025-06-04 08:32:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:32:46] c-115-5.aglt2.org
[2025-06-04 08:32:46] apptainer works
[2025-06-04 08:32:46] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:32:46] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:32:46] Starting ATLAS job with PandaID=6678392100
[2025-06-04 08:32:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:16:42]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:16:42] 2025-06-04 14:16:19,545 | INFO     | PID=1422 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 10:16:42] 2025-06-04 14:16:20,107 | INFO     | monitor loop #460: job 0:6678392100 is in state 'finished'
[2025-06-04 10:16:42] 2025-06-04 14:16:20,107 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:16:42] 2025-06-04 14:16:22,610 | INFO     | monitor loop #461: job 0:6678392100 is in state 'finished'
[2025-06-04 10:16:42] 2025-06-04 14:16:22,610 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:16:42] 2025-06-04 14:16:23,165 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 10:16:42] 2025-06-04 14:16:23,166 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678392100/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:16:42] 2025-06-04 14:16:23,167 | INFO     | extracted standard info from prmon json
[2025-06-04 10:16:42] 2025-06-04 14:16:23,167 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:16:42] 2025-06-04 14:16:23,167 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:16:42] 2025-06-04 14:16:23,168 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:16:42] 2025-06-04 14:16:23,168 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:16:42] 2025-06-04 14:16:23,171 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:16:42] 2025-06-04 14:16:23,172 | INFO     | sum of square deviations: 319447850.0
[2025-06-04 10:16:42] 2025-06-04 14:16:23,172 | INFO     | sum of deviations: -1661660496.000001
[2025-06-04 10:16:42] 2025-06-04 14:16:23,173 | INFO     | mean x: 1749043465.0
[2025-06-04 10:16:42] 2025-06-04 14:16:23,173 | INFO     | mean y: 2554913.5643564356
[2025-06-04 10:16:42] 2025-06-04 14:16:23,173 | INFO     | -- intersect: 9100491968.32137
[2025-06-04 10:16:42] 2025-06-04 14:16:23,173 | INFO     | intersect: 9100491968.32137
[2025-06-04 10:16:42] 2025-06-04 14:16:23,174 | INFO     | chi2: 1.6290867055405818
[2025-06-04 10:16:42] 2025-06-04 14:16:23,174 | INFO     | sum of square deviations: 274312120.0
[2025-06-04 10:16:42] 2025-06-04 14:16:23,175 | INFO     | sum of deviations: -871931834.4999986
[2025-06-04 10:16:42] 2025-06-04 14:16:23,175 | INFO     | mean x: 1749043312.5
[2025-06-04 10:16:42] 2025-06-04 14:16:23,175 | INFO     | mean y: 2557583.9479166665
[2025-06-04 10:16:42] 2025-06-04 14:16:23,176 | INFO     | -- intersect: 5562087888.653664
[2025-06-04 10:16:42] 2025-06-04 14:16:23,176 | INFO     | intersect: 5562087888.653664
[2025-06-04 10:16:42] 2025-06-04 14:16:23,176 | INFO     | chi2: 1.6321716118366025
[2025-06-04 10:16:42] 2025-06-04 14:16:23,176 | INFO     | current chi2=1.6321716118366025 (change=-0.18936415634164136 %)
[2025-06-04 10:16:42] 2025-06-04 14:16:23,176 | INFO     | right removable region: 95
[2025-06-04 10:16:42] 2025-06-04 14:16:23,177 | INFO     | sum of square deviations: 274312120.0
[2025-06-04 10:16:42] 2025-06-04 14:16:23,177 | INFO     | sum of deviations: -17210963370.5
[2025-06-04 10:16:42] 2025-06-04 14:16:23,177 | INFO     | mean x: 1749043617.5
[2025-06-04 10:16:42] 2025-06-04 14:16:23,177 | INFO     | mean y: 2606282.59375
[2025-06-04 10:16:42] 2025-06-04 14:16:23,178 | INFO     | -- intersect: 109741562163.21365
[2025-06-04 10:16:42] 2025-06-04 14:16:23,178 | INFO     | intersect: 109741562163.21365
[2025-06-04 10:16:42] 2025-06-04 14:16:23,178 | INFO     | chi2: 0.08870760196212885
[2025-06-04 10:16:42] 2025-06-04 14:16:23,178 | INFO     | current chi2=0.08870760196212885 (change=94.55476484705012 %)
[2025-06-04 10:16:42] 2025-06-04 14:16:23,178 | INFO     | sum of square deviations: 233641590.0
[2025-06-04 10:16:42] 2025-06-04 14:16:23,179 | INFO     | sum of deviations: -15821246639.0
[2025-06-04 10:16:42] 2025-06-04 14:16:23,179 | INFO     | mean x: 1749043770.0
[2025-06-04 10:16:42] 2025-06-04 14:16:23,179 | INFO     | mean y: 2600983.758241758
[2025-06-04 10:16:42] 2025-06-04 14:16:23,179 | INFO     | -- intersect: 118440644773.72041
[2025-06-04 10:16:42] 2025-06-04 14:16:23,179 | INFO     | intersect: 118440644773.72041
[2025-06-04 10:16:42] 2025-06-04 14:16:23,179 | INFO     | chi2: 0.08122706144264517
[2025-06-04 10:16:42] 2025-06-04 14:16:23,180 | INFO     | current chi2=0.08122706144264517 (change=8.432806607349473 %)
[2025-06-04 10:16:42] 2025-06-04 14:16:23,180 | INFO     | left removable region: 20
[2025-06-04 10:16:42] 2025-06-04 14:16:23,180 | INFO     | sum of square deviations: 130793150.0
[2025-06-04 10:16:42] 2025-06-04 14:16:23,180 | INFO     | sum of deviations: -10065062769.0
[2025-06-04 10:16:42] 2025-06-04 14:16:23,180 | INFO     | mean x: 1749043892.0
[2025-06-04 10:16:42] 2025-06-04 14:16:23,181 | INFO     | mean y: 2586510.053333333
[2025-06-04 10:16:42] 2025-06-04 14:16:23,181 | INFO     | -- intersect: 134598599823.56445
[2025-06-04 10:16:42] 2025-06-04 14:16:23,181 | INFO     | intersect: 134598599823.56445
[2025-06-04 10:16:42] 2025-06-04 14:16:23,181 | INFO     | chi2: 0.0732621046078065
[2025-06-04 10:16:42] 2025-06-04 14:16:23,181 | INFO     | -- intersect: 134598599823.56445
[2025-06-04 10:16:42] 2025-06-04 14:16:23,181 | INFO     | current memory leak: -76.95 B/s (using 75 data points, chi2=0.07)
[2025-06-04 10:16:42] 2025-06-04 14:16:23,182 | INFO     | ..............................
[2025-06-04 10:16:42] 2025-06-04 14:16:23,182 | INFO     | . Timing measurements:
[2025-06-04 10:16:42] 2025-06-04 14:16:23,182 | INFO     | . get job = 0 s
[2025-06-04 10:16:42] 2025-06-04 14:16:23,182 | INFO     | . initial setup = 2 s
[2025-06-04 10:16:42] 2025-06-04 14:16:23,182 | INFO     | . payload setup = 11 s
[2025-06-04 10:16:42] 2025-06-04 14:16:23,182 | INFO     | . stage-in = 0 s
[2025-06-04 10:16:42] 2025-06-04 14:16:23,183 | INFO     | . payload execution = 6162 s
[2025-06-04 10:16:42] 2025-06-04 14:16:23,183 | INFO     | . stage-out = 0 s
[2025-06-04 10:16:42] 2025-06-04 14:16:23,183 | INFO     | . log creation = 0 s
[2025-06-04 10:16:42] 2025-06-04 14:16:23,183 | INFO     | ..............................
[2025-06-04 10:16:42] 2025-06-04 14:16:23,275 | INFO     | 
[2025-06-04 10:16:42] 2025-06-04 14:16:23,275 | INFO     | job summary report
[2025-06-04 10:16:42] 2025-06-04 14:16:23,275 | INFO     | --------------------------------------------------
[2025-06-04 10:16:42] 2025-06-04 14:16:23,276 | INFO     | PanDA job id: 6678392100
[2025-06-04 10:16:42] 2025-06-04 14:16:23,276 | INFO     | task id: 45006595
[2025-06-04 10:16:42] 2025-06-04 14:16:23,276 | INFO     | errors: (none)
[2025-06-04 10:16:42] 2025-06-04 14:16:23,276 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:16:42] 2025-06-04 14:16:23,276 | INFO     | pilot state: finished 
[2025-06-04 10:16:42] 2025-06-04 14:16:23,277 | INFO     | transexitcode: 0
[2025-06-04 10:16:42] 2025-06-04 14:16:23,277 | INFO     | exeerrorcode: 0
[2025-06-04 10:16:42] 2025-06-04 14:16:23,277 | INFO     | exeerrordiag: 
[2025-06-04 10:16:42] 2025-06-04 14:16:23,277 | INFO     | exitcode: 0
[2025-06-04 10:16:42] 2025-06-04 14:16:23,277 | INFO     | exitmsg: OK
[2025-06-04 10:16:42] 2025-06-04 14:16:23,277 | INFO     | cpuconsumptiontime: 45762 s
[2025-06-04 10:16:42] 2025-06-04 14:16:23,278 | INFO     | nevents: 400
[2025-06-04 10:16:42] 2025-06-04 14:16:23,278 | INFO     | neventsw: 0
[2025-06-04 10:16:42] 2025-06-04 14:16:23,278 | INFO     | pid: 8020
[2025-06-04 10:16:42] 2025-06-04 14:16:23,278 | INFO     | pgrp: 8020
[2025-06-04 10:16:42] 2025-06-04 14:16:23,278 | INFO     | corecount: 8
[2025-06-04 10:16:42] 2025-06-04 14:16:23,278 | INFO     | event service: False
[2025-06-04 10:16:42] 2025-06-04 14:16:23,279 | INFO     | sizes: {0: 2397342, 6: 2397548, 11: 2397576, 6177: 2424203, 6178: 2433200, 6184: 2433314}
[2025-06-04 10:16:42] 2025-06-04 14:16:23,279 | INFO     | --------------------------------------------------
[2025-06-04 10:16:42] 2025-06-04 14:16:23,279 | INFO     | 
[2025-06-04 10:16:42] 2025-06-04 14:16:23,279 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 10:16:42] 2025-06-04 14:16:23,308 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:16:42] 2025-06-04 14:16:23,308 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:16:42] 2025-06-04 14:16:23,308 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:16:42] 2025-06-04 14:16:23,309 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:16:42] 2025-06-04 14:16:23,309 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:16:42] 2025-06-04 14:16:23,309 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:16:42] 2025-06-04 14:16:23,309 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:16:42] 2025-06-04 14:16:23,309 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:16:42] 2025-06-04 14:16:23,310 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:16:42] 2025-06-04 14:16:23,310 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:16:42] 2025-06-04 14:16:23,310 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:16:42] 2025-06-04 14:16:23,310 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:16:42] 2025-06-04 14:16:23,310 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:16:42] 2025-06-04 14:16:23,311 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:16:42] 2025-06-04 14:16:23,311 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:16:42] 2025-06-04 14:16:23,311 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:16:42] 2025-06-04 14:16:23,311 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:16:42] 2025-06-04 14:16:23,311 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:16:42] 2025-06-04 14:16:23,311 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:16:42] 2025-06-04 14:16:23,312 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:16:42] 2025-06-04 14:16:23,312 | INFO     | job 6678392100 has completed (purged errors)
[2025-06-04 10:16:42] 2025-06-04 14:16:23,312 | INFO     | overall cleanup function is called
[2025-06-04 10:16:42] 2025-06-04 14:16:24,321 | INFO     | --- collectZombieJob: --- 10, [8020]
[2025-06-04 10:16:42] 2025-06-04 14:16:24,321 | INFO     | zombie collector waiting for pid 8020
[2025-06-04 10:16:42] 2025-06-04 14:16:24,321 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:16:42] 2025-06-04 14:16:24,321 | INFO     | collected zombie processes
[2025-06-04 10:16:42] 2025-06-04 14:16:24,322 | INFO     | will attempt to kill all subprocesses of pid=8020
[2025-06-04 10:16:42] 2025-06-04 14:16:24,402 | INFO     | process IDs to be killed: [8020] (in reverse order)
[2025-06-04 10:16:42] 2025-06-04 14:16:24,459 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:16:42] 2025-06-04 14:16:24,459 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:16:42] 2025-06-04 14:16:24,464 | INFO     | did not find any defunct processes belonging to 8020
[2025-06-04 10:16:42] 2025-06-04 14:16:24,467 | INFO     | did not find any defunct processes belonging to 8020
[2025-06-04 10:16:42] 2025-06-04 14:16:24,468 | INFO     | ready for new job
[2025-06-04 10:16:42] 2025-06-04 14:16:24,468 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:16:42] 2025-06-04 14:16:24,469 | INFO     | **************************************
[2025-06-04 10:16:42] 2025-06-04 14:16:24,469 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:16:42] 2025-06-04 14:16:24,470 | INFO     | **************************************
[2025-06-04 10:16:42] 2025-06-04 14:16:24,470 | INFO     | 
[2025-06-04 10:16:42] 2025-06-04 14:16:24,470 | INFO     | architecture information:
[2025-06-04 10:16:42] 2025-06-04 14:16:24,471 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:16:42] 2025-06-04 14:16:24,486 | INFO     | cat /etc/os-release:
[2025-06-04 10:16:42] NAME="CentOS Linux"
[2025-06-04 10:16:42] VERSION="7 (Core)"
[2025-06-04 10:16:42] ID="centos"
[2025-06-04 10:16:42] ID_LIKE="rhel fedora"
[2025-06-04 10:16:42] VERSION_ID="7"
[2025-06-04 10:16:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:16:42] ANSI_COLOR="0;31"
[2025-06-04 10:16:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:16:42] HOME_URL="https://www.centos.org/"
[2025-06-04 10:16:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:16:42] 
[2025-06-04 10:16:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:16:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:16:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:16:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:16:42] 
[2025-06-04 10:16:42] 2025-06-04 14:16:24,487 | INFO     | **************************************
[2025-06-04 10:16:42] 2025-06-04 14:16:24,990 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 10:16:42] 2025-06-04 14:16:25,009 | INFO     | sufficient remaining disk space (18638438400 B)
[2025-06-04 10:16:42] 2025-06-04 14:16:25,009 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:16:42] 2025-06-04 14:16:25,010 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:16:42] 2025-06-04 14:16:25,010 | INFO     | update_server=False
[2025-06-04 10:16:42] 2025-06-04 14:16:25,010 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:16:42] 2025-06-04 14:16:25,011 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:16:42] 2025-06-04 14:16:25,011 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:16:42] 2025-06-04 14:16:25,113 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 10:16:42] 2025-06-04 14:16:25,114 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 10:16:42] 2025-06-04 14:16:25,114 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:16:42] 2025-06-04 14:16:25,115 | INFO     | will abort loop
[2025-06-04 10:16:42] 2025-06-04 14:16:25,563 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:16:42] 2025-06-04 14:16:25,563 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:16:42] 2025-06-04 14:16:25,563 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:16:42] 2025-06-04 14:16:25,621 | INFO     | all data control threads have been joined
[2025-06-04 10:16:42] 2025-06-04 14:16:25,624 | INFO     | all payload control threads have been joined
[2025-06-04 10:16:42] 2025-06-04 14:16:26,016 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:16:42] 2025-06-04 14:16:26,017 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:16:42] 2025-06-04 14:16:26,088 | INFO     | all job control threads have been joined
[2025-06-04 10:16:42] 2025-06-04 14:16:26,120 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:16:42] 2025-06-04 14:16:26,151 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:16:42] 2025-06-04 14:16:26,156 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:16:42] 2025-06-04 14:16:26,165 | INFO     | [job] validate thread has finished
[2025-06-04 10:16:42] 2025-06-04 14:16:26,170 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:16:42] 2025-06-04 14:16:26,626 | INFO     | [data] control thread has finished
[2025-06-04 10:16:42] 2025-06-04 14:16:26,630 | INFO     | [payload] control thread has finished
[2025-06-04 10:16:42] 2025-06-04 14:16:26,697 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:16:42] 2025-06-04 14:16:26,994 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:16:42] 2025-06-04 14:16:27,017 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:16:42] 2025-06-04 14:16:27,093 | INFO     | [job] control thread has finished
[2025-06-04 10:16:42] 2025-06-04 14:16:27,289 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:16:42] 2025-06-04 14:16:27,358 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:16:42] 2025-06-04 14:16:31,363 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:16:42] 2025-06-04 14:16:35,482 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:16:42] 2025-06-04 14:16:36,488 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:16:42] 2025-06-04 14:16:36,716 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140636316833600)>', '<ExcThread(monitor, started 140635709351680)>']
[2025-06-04 10:16:42] 2025-06-04 14:16:37,612 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:16:42] 2025-06-04 14:16:37,613 | INFO     | [monitor] control thread has ended
[2025-06-04 10:16:42] 2025-06-04 14:16:41,741 | INFO     | all workflow threads have been joined
[2025-06-04 10:16:42] 2025-06-04 14:16:41,742 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:16:42] 2025-06-04 14:16:41,743 | INFO     | traces error code: 0
[2025-06-04 10:16:42] 2025-06-04 14:16:41,743 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:16:42] 2025-06-04 14:16:41,863 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:16:42] 2025-06-04 14:16:41,868 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:16:42] 2025-06-04 14:16:41,873 [wrapper] pilotpid: 1422
[2025-06-04 10:16:42] 2025-06-04 14:16:41,878 [wrapper] Pilot exit status: 0
[2025-06-04 10:16:42] 2025-06-04 14:16:41,897 [wrapper] pandaids: 6678392100
[2025-06-04 10:16:42] 2025-06-04 14:16:41,939 [wrapper] cleanup supervisor_pilot 28894 1423
[2025-06-04 10:16:42] 2025-06-04 14:16:41,943 [wrapper] Test setup, not cleaning
[2025-06-04 10:16:42] 2025-06-04 14:16:41,948 [wrapper] apfmon messages muted
[2025-06-04 10:16:42] 2025-06-04 14:16:41,953 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:16:42] 2025-06-04 14:16:41,957 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:16:42]  *** Error codes and diagnostics ***
[2025-06-04 10:16:42]     "exeErrorCode": 0,
[2025-06-04 10:16:42]     "exeErrorDiag": "",
[2025-06-04 10:16:42]     "pilotErrorCode": 0,
[2025-06-04 10:16:42]     "pilotErrorDiag": "",
[2025-06-04 10:16:42]  *** Listing of results directory ***
[2025-06-04 10:16:42] total 392540
[2025-06-04 10:16:42] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 10:16:42] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 03:38 queuedata.json
[2025-06-04 10:16:42] -rwx------ 1 boincer umatlas     37140 Jun  4 03:38 runpilot2-wrapper.sh
[2025-06-04 10:16:42] -rw-r--r-- 1 boincer umatlas       100 Jun  4 08:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:16:42] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 08:32 run_atlas
[2025-06-04 10:16:42] -rw-r--r-- 1 boincer umatlas       105 Jun  4 08:32 job.xml
[2025-06-04 10:16:42] -rw-r--r-- 2 boincer umatlas 213495061 Jun  4 08:32 EVNT.45006593._002206.pool.root.1
[2025-06-04 10:16:42] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:32 start_atlas.sh
[2025-06-04 10:16:42] drwxrwx--x 2 boincer umatlas      4096 Jun  4 08:32 shared
[2025-06-04 10:16:42] -rw-r--r-- 2 boincer umatlas    508885 Jun  4 08:32 input.tar.gz
[2025-06-04 10:16:42] -rw-r--r-- 1 boincer umatlas         0 Jun  4 08:32 boinc_lockfile
[2025-06-04 10:16:42] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 08:32 pandaJob.out
[2025-06-04 10:16:42] -rw------- 1 boincer umatlas    986811 Jun  4 08:32 agis_schedconf.cvmfs.json
[2025-06-04 10:16:42] -rw------- 1 boincer umatlas   1598969 Jun  4 08:33 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:16:42] drwx------ 4 boincer umatlas      4096 Jun  4 08:33 pilot3
[2025-06-04 10:16:42] -rw-r--r-- 1 boincer umatlas      5824 Jun  4 10:11 init_data.xml
[2025-06-04 10:16:42] -rw------- 1 boincer umatlas 182874927 Jun  4 10:15 HITS.45006595._055129.pool.root.1
[2025-06-04 10:16:42] -rw-r--r-- 1 boincer umatlas       529 Jun  4 10:15 boinc_task_state.xml
[2025-06-04 10:16:42] -rw------- 1 boincer umatlas      1047 Jun  4 10:16 memory_monitor_summary.json
[2025-06-04 10:16:42] -rw------- 1 boincer umatlas    307095 Jun  4 10:16 log.45006595._055129.job.log.tgz.1
[2025-06-04 10:16:42] -rw------- 1 boincer umatlas        95 Jun  4 10:16 pilot_heartbeat.json
[2025-06-04 10:16:42] -rw------- 1 boincer umatlas      7760 Jun  4 10:16 heartbeat.json
[2025-06-04 10:16:42] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 10:16 boinc_mmap_file
[2025-06-04 10:16:42] -rw-r--r-- 1 boincer umatlas        27 Jun  4 10:16 wrapper_checkpoint.txt
[2025-06-04 10:16:42] -rw------- 1 boincer umatlas      4611 Jun  4 10:16 pilotlog.txt
[2025-06-04 10:16:42] -rw------- 1 boincer umatlas    574393 Jun  4 10:16 log.45006595._055129.job.log.1
[2025-06-04 10:16:42] -rw------- 1 boincer umatlas       357 Jun  4 10:16 output.list
[2025-06-04 10:16:42] -rw-r--r-- 1 boincer umatlas       620 Jun  4 10:16 runtime_log
[2025-06-04 10:16:42] -rw------- 1 boincer umatlas    901120 Jun  4 10:16 result.tar.gz
[2025-06-04 10:16:42] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 10:16 runtime_log.err
[2025-06-04 10:16:42] -rw------- 1 boincer umatlas       657 Jun  4 10:16 4INKDmGtxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEgnKDm7DLwDn.diag
[2025-06-04 10:16:42] -rw-r--r-- 1 boincer umatlas     21049 Jun  4 10:16 stderr.txt
[2025-06-04 10:16:42] HITS file was successfully produced:
[2025-06-04 10:16:42] -rw------- 1 boincer umatlas 182874927 Jun  4 10:15 shared/HITS.pool.root.1
[2025-06-04 10:16:42]  *** Contents of shared directory: ***
[2025-06-04 10:16:42] total 388484
[2025-06-04 10:16:42] -rw-r--r-- 2 boincer umatlas 213495061 Jun  4 08:32 ATLAS.root_0
[2025-06-04 10:16:42] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:32 start_atlas.sh
[2025-06-04 10:16:42] -rw-r--r-- 2 boincer umatlas    508885 Jun  4 08:32 input.tar.gz
[2025-06-04 10:16:42] -rw------- 1 boincer umatlas 182874927 Jun  4 10:15 HITS.pool.root.1
[2025-06-04 10:16:42] -rw------- 1 boincer umatlas    901120 Jun  4 10:16 result.tar.gz
10:16:43 (30259): run_atlas exited; CPU time 45697.126085
10:16:43 (30259): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN