Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:39:40 (3933881): wrapper (7.7.26015): starting
08:39:40 (3933881): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:39:40] Arguments: --nthreads 8
[2025-06-04 08:39:40] Threads: 8
[2025-06-04 08:39:40] Checking for CVMFS
[2025-06-04 08:39:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:39:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:39:40] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:39:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:39:41] 2.12.6.0 7995 1349 160112 146780 3 328 26443284 32935937 9997 16776704 0 17981806 99.942 1920433 32905 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:39:41] CVMFS is ok
[2025-06-04 08:39:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:39:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:39:41] Further information can be found at the LHC@home message board.
[2025-06-04 08:39:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:39:41] Checking for apptainer binary...
[2025-06-04 08:39:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:39:41] Running /usr/bin/apptainer --version
[2025-06-04 08:39:41] apptainer version 1.4.1-1.el9
[2025-06-04 08:39:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:39:41] c6-8-25-2.aglt2.org
[2025-06-04 08:39:41] apptainer works
[2025-06-04 08:39:41] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:39:41] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:39:41] Starting ATLAS job with PandaID=6678715544
[2025-06-04 08:39:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:38:06]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:38:06]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 09:38:06]  is_altstaged=None
[2025-06-04 09:38:06]  is_tar=False
[2025-06-04 09:38:06]  lfn=log.45006595._055509.job.log.tgz.1
[2025-06-04 09:38:06]  mtime=0
[2025-06-04 09:38:06]  protocol_id=None
[2025-06-04 09:38:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:38:06]  replicas=None
[2025-06-04 09:38:06]  scope=mc23_13p6TeV
[2025-06-04 09:38:06]  status=None
[2025-06-04 09:38:06]  status_code=0
[2025-06-04 09:38:06]  storage_token=
[2025-06-04 09:38:06]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678715544/log.45006595._055509.job.log.tgz.1
[2025-06-04 09:38:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cc/d5/log.45006595._055509.job.log.tgz.1
[2025-06-04 09:38:06]  workdir=None
[2025-06-04 09:38:06] ]
[2025-06-04 09:38:06] 2025-06-04 13:37:39,590 | INFO     | transferring file log.45006595._055509.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678715544/log.45006595._055509.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:38:06] 2025-06-04 13:37:39,590 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678715544/log.45006595._055509.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._055509.job
[2025-06-04 09:38:06] 2025-06-04 13:37:39,608 | INFO     | adding to output.list: log.45006595._055509.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cc/d5/log.45006595._055509.job.log.tg
[2025-06-04 09:38:06] 2025-06-04 13:37:39,609 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:38:06] 2025-06-04 13:37:39,609 | INFO     | summary of transferred files:
[2025-06-04 09:38:06] 2025-06-04 13:37:39,609 | INFO     |  -- lfn=log.45006595._055509.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:38:06] 2025-06-04 13:37:39,609 | INFO     | stage-out finished correctly
[2025-06-04 09:38:06] 2025-06-04 13:37:39,757 | INFO     | monitor loop #259: job 0:6678715544 is in state 'finished'
[2025-06-04 09:38:06] 2025-06-04 13:37:39,757 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:38:06] 2025-06-04 13:37:42,260 | INFO     | monitor loop #260: job 0:6678715544 is in state 'finished'
[2025-06-04 09:38:06] 2025-06-04 13:37:42,261 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:38:06] 2025-06-04 13:37:42,963 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:38:06] 2025-06-04 13:37:43,865 | INFO     | job 6678715544 has state=finished
[2025-06-04 09:38:06] 2025-06-04 13:37:43,866 | INFO     | preparing for final server update for job 6678715544 in state='finished'
[2025-06-04 09:38:06] 2025-06-04 13:37:43,867 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:38:06] 2025-06-04 13:37:43,867 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:38:06] 2025-06-04 13:37:43,867 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:38:06] 2025-06-04 13:37:43,867 | INFO     | job 6678715544 has finished - writing final server update
[2025-06-04 09:38:06] 2025-06-04 13:37:43,867 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:38:06] 2025-06-04 13:37:43,885 | INFO     | executing command: lscpu
[2025-06-04 09:38:06] 2025-06-04 13:37:43,970 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:38:06] 2025-06-04 13:37:44,764 | INFO     | monitor loop #261: job 0:6678715544 is in state 'finished'
[2025-06-04 09:38:06] 2025-06-04 13:37:44,764 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:38:06] 2025-06-04 13:37:46,848 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:38:06] 2025-06-04 13:37:46,849 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678715544/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:38:06] 2025-06-04 13:37:46,850 | INFO     | extracted standard info from prmon json
[2025-06-04 09:38:06] 2025-06-04 13:37:46,850 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:38:06] 2025-06-04 13:37:46,850 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:38:06] 2025-06-04 13:37:46,850 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:38:06] 2025-06-04 13:37:46,850 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:38:06] 2025-06-04 13:37:46,852 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:38:06] 2025-06-04 13:37:46,852 | INFO     | sum of square deviations: 38744912.5
[2025-06-04 09:38:06] 2025-06-04 13:37:46,852 | INFO     | sum of deviations: 1550472654.5000002
[2025-06-04 09:38:06] 2025-06-04 13:37:46,852 | INFO     | mean x: 1749042612.5
[2025-06-04 09:38:06] 2025-06-04 13:37:46,853 | INFO     | mean y: 2259788.98
[2025-06-04 09:38:06] 2025-06-04 13:37:46,853 | INFO     | -- intersect: -69989968022.5163
[2025-06-04 09:38:06] 2025-06-04 13:37:46,853 | INFO     | intersect: -69989968022.5163
[2025-06-04 09:38:06] 2025-06-04 13:37:46,853 | INFO     | chi2: 0.7391256540727812
[2025-06-04 09:38:06] 2025-06-04 13:37:46,853 | INFO     | -- intersect: -69989968022.5163
[2025-06-04 09:38:06] 2025-06-04 13:37:46,853 | INFO     | current memory leak: 40.02 B/s (using 50 data points, chi2=0.74)
[2025-06-04 09:38:06] 2025-06-04 13:37:46,853 | INFO     | ..............................
[2025-06-04 09:38:06] 2025-06-04 13:37:46,854 | INFO     | . Timing measurements:
[2025-06-04 09:38:06] 2025-06-04 13:37:46,854 | INFO     | . get job = 0 s
[2025-06-04 09:38:06] 2025-06-04 13:37:46,854 | INFO     | . initial setup = 2 s
[2025-06-04 09:38:06] 2025-06-04 13:37:46,854 | INFO     | . payload setup = 5 s
[2025-06-04 09:38:06] 2025-06-04 13:37:46,854 | INFO     | . stage-in = 0 s
[2025-06-04 09:38:06] 2025-06-04 13:37:46,854 | INFO     | . payload execution = 3445 s
[2025-06-04 09:38:06] 2025-06-04 13:37:46,854 | INFO     | . stage-out = 0 s
[2025-06-04 09:38:06] 2025-06-04 13:37:46,854 | INFO     | . log creation = 0 s
[2025-06-04 09:38:06] 2025-06-04 13:37:46,854 | INFO     | ..............................
[2025-06-04 09:38:06] 2025-06-04 13:37:46,944 | INFO     | 
[2025-06-04 09:38:06] 2025-06-04 13:37:46,944 | INFO     | job summary report
[2025-06-04 09:38:06] 2025-06-04 13:37:46,944 | INFO     | --------------------------------------------------
[2025-06-04 09:38:06] 2025-06-04 13:37:46,944 | INFO     | PanDA job id: 6678715544
[2025-06-04 09:38:06] 2025-06-04 13:37:46,944 | INFO     | task id: 45006595
[2025-06-04 09:38:06] 2025-06-04 13:37:46,945 | INFO     | errors: (none)
[2025-06-04 09:38:06] 2025-06-04 13:37:46,945 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:38:06] 2025-06-04 13:37:46,945 | INFO     | pilot state: finished 
[2025-06-04 09:38:06] 2025-06-04 13:37:46,945 | INFO     | transexitcode: 0
[2025-06-04 09:38:06] 2025-06-04 13:37:46,945 | INFO     | exeerrorcode: 0
[2025-06-04 09:38:06] 2025-06-04 13:37:46,945 | INFO     | exeerrordiag: 
[2025-06-04 09:38:06] 2025-06-04 13:37:46,945 | INFO     | exitcode: 0
[2025-06-04 09:38:06] 2025-06-04 13:37:46,945 | INFO     | exitmsg: OK
[2025-06-04 09:38:06] 2025-06-04 13:37:46,945 | INFO     | cpuconsumptiontime: 22519 s
[2025-06-04 09:38:06] 2025-06-04 13:37:46,945 | INFO     | nevents: 400
[2025-06-04 09:38:06] 2025-06-04 13:37:46,945 | INFO     | neventsw: 0
[2025-06-04 09:38:06] 2025-06-04 13:37:46,945 | INFO     | pid: 3944141
[2025-06-04 09:38:06] 2025-06-04 13:37:46,945 | INFO     | pgrp: 3944141
[2025-06-04 09:38:06] 2025-06-04 13:37:46,945 | INFO     | corecount: 8
[2025-06-04 09:38:06] 2025-06-04 13:37:46,945 | INFO     | event service: False
[2025-06-04 09:38:06] 2025-06-04 13:37:46,946 | INFO     | sizes: {0: 2397292, 3: 2397498, 11: 2397526, 3454: 2423123, 3455: 2423122, 3456: 2432119, 3459: 2432303, 3463: 2432473}
[2025-06-04 09:38:06] 2025-06-04 13:37:46,946 | INFO     | --------------------------------------------------
[2025-06-04 09:38:06] 2025-06-04 13:37:46,946 | INFO     | 
[2025-06-04 09:38:06] 2025-06-04 13:37:46,946 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 09:38:06] 2025-06-04 13:37:46,966 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:38:06] 2025-06-04 13:37:46,967 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:38:06] 2025-06-04 13:37:46,967 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:38:06] 2025-06-04 13:37:46,967 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:38:06] 2025-06-04 13:37:46,967 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:38:06] 2025-06-04 13:37:46,967 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:38:06] 2025-06-04 13:37:46,967 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:38:06] 2025-06-04 13:37:46,967 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:38:06] 2025-06-04 13:37:46,967 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:38:06] 2025-06-04 13:37:46,967 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:38:06] 2025-06-04 13:37:46,967 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:38:06] 2025-06-04 13:37:46,967 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:38:06] 2025-06-04 13:37:46,967 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:38:06] 2025-06-04 13:37:46,967 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:38:06] 2025-06-04 13:37:46,967 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:38:06] 2025-06-04 13:37:46,968 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:38:06] 2025-06-04 13:37:46,968 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:38:06] 2025-06-04 13:37:46,968 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:38:06] 2025-06-04 13:37:46,968 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:38:06] 2025-06-04 13:37:46,968 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:38:06] 2025-06-04 13:37:46,968 | INFO     | job 6678715544 has completed (purged errors)
[2025-06-04 09:38:06] 2025-06-04 13:37:46,968 | INFO     | overall cleanup function is called
[2025-06-04 09:38:06] 2025-06-04 13:37:47,973 | INFO     | --- collectZombieJob: --- 10, [3944141]
[2025-06-04 09:38:06] 2025-06-04 13:37:47,973 | INFO     | zombie collector waiting for pid 3944141
[2025-06-04 09:38:06] 2025-06-04 13:37:47,973 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:38:06] 2025-06-04 13:37:47,973 | INFO     | collected zombie processes
[2025-06-04 09:38:06] 2025-06-04 13:37:47,974 | INFO     | will attempt to kill all subprocesses of pid=3944141
[2025-06-04 09:38:06] 2025-06-04 13:37:48,298 | INFO     | process IDs to be killed: [3944141] (in reverse order)
[2025-06-04 09:38:06] 2025-06-04 13:37:48,384 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:38:06] 2025-06-04 13:37:48,385 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:38:06] 2025-06-04 13:37:48,396 | INFO     | did not find any defunct processes belonging to 3944141
[2025-06-04 09:38:06] 2025-06-04 13:37:48,407 | INFO     | did not find any defunct processes belonging to 3944141
[2025-06-04 09:38:06] 2025-06-04 13:37:48,407 | INFO     | ready for new job
[2025-06-04 09:38:06] 2025-06-04 13:37:48,407 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:38:06] 2025-06-04 13:37:48,409 | INFO     | **************************************
[2025-06-04 09:38:06] 2025-06-04 13:37:48,409 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:38:06] 2025-06-04 13:37:48,409 | INFO     | **************************************
[2025-06-04 09:38:06] 2025-06-04 13:37:48,409 | INFO     | 
[2025-06-04 09:38:06] 2025-06-04 13:37:48,426 | INFO     | architecture information:
[2025-06-04 09:38:06] 2025-06-04 13:37:48,427 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:38:06] 2025-06-04 13:37:48,442 | INFO     | cat /etc/os-release:
[2025-06-04 09:38:06] NAME="CentOS Linux"
[2025-06-04 09:38:06] VERSION="7 (Core)"
[2025-06-04 09:38:06] ID="centos"
[2025-06-04 09:38:06] ID_LIKE="rhel fedora"
[2025-06-04 09:38:06] VERSION_ID="7"
[2025-06-04 09:38:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:38:06] ANSI_COLOR="0;31"
[2025-06-04 09:38:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:38:06] HOME_URL="https://www.centos.org/"
[2025-06-04 09:38:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:38:06] 
[2025-06-04 09:38:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:38:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:38:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:38:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:38:06] 
[2025-06-04 09:38:06] 2025-06-04 13:37:48,442 | INFO     | **************************************
[2025-06-04 09:38:06] 2025-06-04 13:37:48,945 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 09:38:06] 2025-06-04 13:37:48,960 | INFO     | sufficient remaining disk space (75614912512 B)
[2025-06-04 09:38:06] 2025-06-04 13:37:48,960 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:38:06] 2025-06-04 13:37:48,960 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:38:06] 2025-06-04 13:37:48,960 | INFO     | update_server=False
[2025-06-04 09:38:06] 2025-06-04 13:37:48,960 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:38:06] 2025-06-04 13:37:48,960 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:38:06] 2025-06-04 13:37:48,961 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:38:06] 2025-06-04 13:37:48,961 | INFO     | aborting loop
[2025-06-04 09:38:06] 2025-06-04 13:37:48,961 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:38:06] 2025-06-04 13:37:48,962 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:38:06] 2025-06-04 13:37:48,962 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:38:06] 2025-06-04 13:37:49,061 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:38:06] 2025-06-04 13:37:49,119 | INFO     | all job control threads have been joined
[2025-06-04 09:38:06] 2025-06-04 13:37:49,742 | INFO     | all data control threads have been joined
[2025-06-04 09:38:06] 2025-06-04 13:37:49,966 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:38:06] 2025-06-04 13:37:49,967 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:38:06] 2025-06-04 13:37:50,025 | INFO     | all payload control threads have been joined
[2025-06-04 09:38:06] 2025-06-04 13:37:50,125 | INFO     | [job] control thread has finished
[2025-06-04 09:38:06] 2025-06-04 13:37:50,217 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:38:06] 2025-06-04 13:37:50,329 | INFO     | [job] validate thread has finished
[2025-06-04 09:38:06] 2025-06-04 13:37:50,610 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:38:06] 2025-06-04 13:37:50,661 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:38:06] 2025-06-04 13:37:50,739 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:38:06] 2025-06-04 13:37:50,748 | INFO     | [data] control thread has finished
[2025-06-04 09:38:06] 2025-06-04 13:37:50,991 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:38:06] 2025-06-04 13:37:51,030 | INFO     | [payload] control thread has finished
[2025-06-04 09:38:06] 2025-06-04 13:37:51,372 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:38:06] 2025-06-04 13:37:51,465 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:38:06] 2025-06-04 13:37:51,956 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:38:06] 2025-06-04 13:37:52,223 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:38:06] 2025-06-04 13:37:52,961 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:38:06] 2025-06-04 13:37:53,067 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:38:06] 2025-06-04 13:37:59,183 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:38:06] 2025-06-04 13:38:00,188 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:38:06] 2025-06-04 13:38:01,068 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140545593513792)>', '<ExcThread(monitor, started 140544877520640)>']
[2025-06-04 09:38:06] 2025-06-04 13:38:02,024 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:38:06] 2025-06-04 13:38:02,025 | INFO     | [monitor] control thread has ended
[2025-06-04 09:38:06] 2025-06-04 13:38:06,093 | INFO     | all workflow threads have been joined
[2025-06-04 09:38:06] 2025-06-04 13:38:06,094 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:38:06] 2025-06-04 13:38:06,094 | INFO     | traces error code: 0
[2025-06-04 09:38:06] 2025-06-04 13:38:06,094 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:38:06] 2025-06-04 13:38:06,239 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:38:06] 2025-06-04 13:38:06,241 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:38:06] 2025-06-04 13:38:06,242 [wrapper] pilotpid: 3937526
[2025-06-04 09:38:06] 2025-06-04 13:38:06,243 [wrapper] Pilot exit status: 0
[2025-06-04 09:38:06] 2025-06-04 13:38:06,250 [wrapper] pandaids: 6678715544
[2025-06-04 09:38:06] 2025-06-04 13:38:06,308 [wrapper] cleanup supervisor_pilot 4066549 3937527
[2025-06-04 09:38:06] 2025-06-04 13:38:06,310 [wrapper] Test setup, not cleaning
[2025-06-04 09:38:06] 2025-06-04 13:38:06,311 [wrapper] apfmon messages muted
[2025-06-04 09:38:06] 2025-06-04 13:38:06,313 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:38:06] 2025-06-04 13:38:06,314 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:38:06]  *** Error codes and diagnostics ***
[2025-06-04 09:38:06]     "exeErrorCode": 0,
[2025-06-04 09:38:06]     "exeErrorDiag": "",
[2025-06-04 09:38:06]     "pilotErrorCode": 0,
[2025-06-04 09:38:06]     "pilotErrorDiag": "",
[2025-06-04 09:38:06]  *** Listing of results directory ***
[2025-06-04 09:38:06] total 390556
[2025-06-04 09:38:06] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 09:38:06] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 03:51 queuedata.json
[2025-06-04 09:38:06] -rwx------. 1 boincer umatlas     37140 Jun  4 03:52 runpilot2-wrapper.sh
[2025-06-04 09:38:06] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:38:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:39 run_atlas
[2025-06-04 09:38:06] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:39 job.xml
[2025-06-04 09:38:06] -rw-r--r--. 2 boincer umatlas 213383835 Jun  4 08:39 EVNT.45006593._001120.pool.root.1
[2025-06-04 09:38:06] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:39 start_atlas.sh
[2025-06-04 09:38:06] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:39 shared
[2025-06-04 09:38:06] -rw-r--r--. 2 boincer umatlas    508886 Jun  4 08:39 input.tar.gz
[2025-06-04 09:38:06] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:39 boinc_lockfile
[2025-06-04 09:38:06] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 08:39 pandaJob.out
[2025-06-04 09:38:06] -rw-------. 1 boincer umatlas    986811 Jun  4 08:39 agis_schedconf.cvmfs.json
[2025-06-04 09:38:06] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:39 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:38:06] drwx------. 4 boincer umatlas      4096 Jun  4 08:39 pilot3
[2025-06-04 09:38:06] -rw-r--r--. 1 boincer umatlas      6852 Jun  4 09:29 init_data.xml
[2025-06-04 09:38:06] -rw-------. 1 boincer umatlas        95 Jun  4 09:36 pilot_heartbeat.json
[2025-06-04 09:38:06] -rw-------. 1 boincer umatlas 181423618 Jun  4 09:37 HITS.45006595._055509.pool.root.1
[2025-06-04 09:38:06] -rw-r--r--. 1 boincer umatlas       529 Jun  4 09:37 boinc_task_state.xml
[2025-06-04 09:38:06] -rw-------. 1 boincer umatlas      1032 Jun  4 09:37 memory_monitor_summary.json
[2025-06-04 09:38:06] -rw-------. 1 boincer umatlas    292167 Jun  4 09:37 log.45006595._055509.job.log.tgz.1
[2025-06-04 09:38:06] -rw-------. 1 boincer umatlas      7714 Jun  4 09:37 heartbeat.json
[2025-06-04 09:38:06] -rw-r--r--. 1 boincer umatlas        27 Jun  4 09:38 wrapper_checkpoint.txt
[2025-06-04 09:38:06] -rw-------. 1 boincer umatlas      4548 Jun  4 09:38 pilotlog.txt
[2025-06-04 09:38:06] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:38 boinc_mmap_file
[2025-06-04 09:38:06] -rw-------. 1 boincer umatlas    353809 Jun  4 09:38 log.45006595._055509.job.log.1
[2025-06-04 09:38:06] -rw-------. 1 boincer umatlas       357 Jun  4 09:38 output.list
[2025-06-04 09:38:06] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:38 runtime_log
[2025-06-04 09:38:06] -rw-------. 1 boincer umatlas    665600 Jun  4 09:38 result.tar.gz
[2025-06-04 09:38:06] -rw-------. 1 boincer umatlas       651 Jun  4 09:38 yB3KDm95xg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtknKDmXqpgnn.diag
[2025-06-04 09:38:06] -rw-r--r--. 1 boincer umatlas      8664 Jun  4 09:38 runtime_log.err
[2025-06-04 09:38:06] -rw-r--r--. 1 boincer umatlas     21365 Jun  4 09:38 stderr.txt
[2025-06-04 09:38:06] HITS file was successfully produced:
[2025-06-04 09:38:06] -rw-------. 1 boincer umatlas 181423618 Jun  4 09:37 shared/HITS.pool.root.1
[2025-06-04 09:38:06]  *** Contents of shared directory: ***
[2025-06-04 09:38:06] total 386728
[2025-06-04 09:38:06] -rw-r--r--. 2 boincer umatlas 213383835 Jun  4 08:39 ATLAS.root_0
[2025-06-04 09:38:06] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:39 start_atlas.sh
[2025-06-04 09:38:06] -rw-r--r--. 2 boincer umatlas    508886 Jun  4 08:39 input.tar.gz
[2025-06-04 09:38:06] -rw-------. 1 boincer umatlas 181423618 Jun  4 09:37 HITS.pool.root.1
[2025-06-04 09:38:06] -rw-------. 1 boincer umatlas    665600 Jun  4 09:38 result.tar.gz
09:38:08 (3933881): run_atlas exited; CPU time 22639.165988
09:38:08 (3933881): called boinc_finish(0)

</stderr_txt>
]]>

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