Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
13:26:49 (3871748): wrapper (7.7.26015): starting
13:26:49 (3871748): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 13:26:49] Arguments: --nthreads 4
[2025-06-04 13:26:49] Threads: 4
[2025-06-04 13:26:49] Checking for CVMFS
[2025-06-04 13:26:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 13:26:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 13:26:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 13:26:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 13:26:49] 2.12.7.0 963705 1254 56392 146780 1 187 3542900 4096000 11350 130560 0 7833427 99.999 317691 1535 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.178:3128 1
[2025-06-04 13:26:49] CVMFS is ok
[2025-06-04 13:26:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:26:49] Checking for apptainer binary...
[2025-06-04 13:26:49] apptainer is not installed, using version from CVMFS
[2025-06-04 13:26:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:26:49] senture-z10pe-l
[2025-06-04 13:26:49] apptainer works
[2025-06-04 13:26:49] Set ATHENA_PROC_NUMBER=4
[2025-06-04 13:26:49] Set ATHENA_CORE_NUMBER=4
[2025-06-04 13:26:49] Starting ATLAS job with PandaID=6678314033
[2025-06-04 13:26:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:05:49]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:05:49] 2025-06-04 15:05:36,080 | INFO     | mean x: 1749044771.5
[2025-06-04 16:05:49] 2025-06-04 15:05:36,080 | INFO     | mean y: 2274986.5384615385
[2025-06-04 16:05:49] 2025-06-04 15:05:36,080 | INFO     | -- intersect: -6999774987.66396
[2025-06-04 16:05:49] 2025-06-04 15:05:36,080 | INFO     | intersect: -6999774987.66396
[2025-06-04 16:05:49] 2025-06-04 15:05:36,081 | INFO     | chi2: 1.9914225469731601
[2025-06-04 16:05:49] 2025-06-04 15:05:36,081 | INFO     | sum of square deviations: 1067554900.0
[2025-06-04 16:05:49] 2025-06-04 15:05:36,082 | INFO     | sum of deviations: 14439264799.0
[2025-06-04 16:05:49] 2025-06-04 15:05:36,082 | INFO     | mean x: 1749044619.0
[2025-06-04 16:05:49] 2025-06-04 15:05:36,082 | INFO     | mean y: 2288158.357615894
[2025-06-04 16:05:49] 2025-06-04 15:05:36,082 | INFO     | -- intersect: -23654498390.98712
[2025-06-04 16:05:49] 2025-06-04 15:05:36,082 | INFO     | intersect: -23654498390.98712
[2025-06-04 16:05:49] 2025-06-04 15:05:36,082 | INFO     | chi2: 1.1215183744937025
[2025-06-04 16:05:49] 2025-06-04 15:05:36,082 | INFO     | current chi2=1.1215183744937025 (change=43.682551139217466 %)
[2025-06-04 16:05:49] 2025-06-04 15:05:36,083 | INFO     | sum of square deviations: 964976232.5
[2025-06-04 16:05:49] 2025-06-04 15:05:36,083 | INFO     | sum of deviations: 13964302725.5
[2025-06-04 16:05:49] 2025-06-04 15:05:36,083 | INFO     | mean x: 1749044466.5
[2025-06-04 16:05:49] 2025-06-04 15:05:36,083 | INFO     | mean y: 2287451.979452055
[2025-06-04 16:05:49] 2025-06-04 15:05:36,084 | INFO     | -- intersect: -25308373668.958202
[2025-06-04 16:05:49] 2025-06-04 15:05:36,084 | INFO     | intersect: -25308373668.958202
[2025-06-04 16:05:49] 2025-06-04 15:05:36,084 | INFO     | chi2: 1.1224267190850021
[2025-06-04 16:05:49] 2025-06-04 15:05:36,084 | INFO     | current chi2=1.1224267190850021 (change=-0.08099239494936392 %)
[2025-06-04 16:05:49] 2025-06-04 15:05:36,084 | INFO     | right removable region: 145
[2025-06-04 16:05:49] 2025-06-04 15:05:36,084 | INFO     | sum of square deviations: 1067554900.0
[2025-06-04 16:05:49] 2025-06-04 15:05:36,085 | INFO     | sum of deviations: -11139990983.0
[2025-06-04 16:05:49] 2025-06-04 15:05:36,085 | INFO     | mean x: 1749044924.0
[2025-06-04 16:05:49] 2025-06-04 15:05:36,085 | INFO     | mean y: 2296629.430463576
[2025-06-04 16:05:49] 2025-06-04 15:05:36,085 | INFO     | -- intersect: 18253671506.93973
[2025-06-04 16:05:49] 2025-06-04 15:05:36,085 | INFO     | intersect: 18253671506.93973
[2025-06-04 16:05:49] 2025-06-04 15:05:36,086 | INFO     | chi2: 0.8960057081624268
[2025-06-04 16:05:49] 2025-06-04 15:05:36,086 | INFO     | current chi2=0.8960057081624268 (change=55.006750851329855 %)
[2025-06-04 16:05:49] 2025-06-04 15:05:36,086 | INFO     | sum of square deviations: 964976232.5
[2025-06-04 16:05:49] 2025-06-04 15:05:36,087 | INFO     | sum of deviations: -11131534736.0
[2025-06-04 16:05:49] 2025-06-04 15:05:36,087 | INFO     | mean x: 1749045076.5
[2025-06-04 16:05:49] 2025-06-04 15:05:36,087 | INFO     | mean y: 2296612.164383562
[2025-06-04 16:05:49] 2025-06-04 15:05:36,087 | INFO     | -- intersect: 20178499266.86503
[2025-06-04 16:05:49] 2025-06-04 15:05:36,088 | INFO     | intersect: 20178499266.86503
[2025-06-04 16:05:49] 2025-06-04 15:05:36,088 | INFO     | chi2: 0.8962097145859411
[2025-06-04 16:05:49] 2025-06-04 15:05:36,088 | INFO     | current chi2=0.8962097145859411 (change=-0.0227684290017254 %)
[2025-06-04 16:05:49] 2025-06-04 15:05:36,088 | INFO     | left removable region: 20
[2025-06-04 16:05:49] 2025-06-04 15:05:36,088 | INFO     | sum of square deviations: 605592750.0
[2025-06-04 16:05:49] 2025-06-04 15:05:36,089 | INFO     | sum of deviations: -1337051679.9999998
[2025-06-04 16:05:49] 2025-06-04 15:05:36,089 | INFO     | mean x: 1749045046.0
[2025-06-04 16:05:49] 2025-06-04 15:05:36,089 | INFO     | mean y: 2311360.152
[2025-06-04 16:05:49] 2025-06-04 15:05:36,089 | INFO     | -- intersect: 3863922347.321144
[2025-06-04 16:05:49] 2025-06-04 15:05:36,089 | INFO     | intersect: 3863922347.321144
[2025-06-04 16:05:49] 2025-06-04 15:05:36,090 | INFO     | chi2: 0.0016129571053664653
[2025-06-04 16:05:49] 2025-06-04 15:05:36,090 | INFO     | -- intersect: 3863922347.321144
[2025-06-04 16:05:49] 2025-06-04 15:05:36,090 | INFO     | current memory leak: -2.21 B/s (using 125 data points, chi2=0.00)
[2025-06-04 16:05:49] 2025-06-04 15:05:36,091 | INFO     | sufficient remaining disk space (112416784384 B)
[2025-06-04 16:05:49] 2025-06-04 15:05:36,091 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 16:05:49] 2025-06-04 15:05:36,092 | INFO     | ..............................
[2025-06-04 16:05:49] 2025-06-04 15:05:36,092 | INFO     | . Timing measurements:
[2025-06-04 16:05:49] 2025-06-04 15:05:36,092 | INFO     | . get job = 0 s
[2025-06-04 16:05:49] 2025-06-04 15:05:36,092 | INFO     | . initial setup = 2 s
[2025-06-04 16:05:49] 2025-06-04 15:05:36,092 | INFO     | . payload setup = 5 s
[2025-06-04 16:05:49] 2025-06-04 15:05:36,092 | INFO     | . stage-in = 0 s
[2025-06-04 16:05:49] 2025-06-04 15:05:36,092 | INFO     | . payload execution = 9484 s
[2025-06-04 16:05:49] 2025-06-04 15:05:36,092 | INFO     | . stage-out = 1 s
[2025-06-04 16:05:49] 2025-06-04 15:05:36,092 | INFO     | . log creation = 0 s
[2025-06-04 16:05:49] 2025-06-04 15:05:36,093 | INFO     | ..............................
[2025-06-04 16:05:49] 2025-06-04 15:05:36,177 | INFO     | size of work directory /var/lib/boinc-client/slots/15/PanDA_Pilot-6678314033: 2846690 B (within 2537553920 B limit)
[2025-06-04 16:05:49] 2025-06-04 15:05:36,178 | INFO     | pfn file=/var/lib/boinc-client/slots/15/PanDA_Pilot-6678314033/HITS.45006595._052918.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 16:05:49] 2025-06-04 15:05:36,178 | INFO     | total size of present files: 0 B (workdir size: 2846690 B)
[2025-06-04 16:05:49] 2025-06-04 15:05:36,178 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/15/PanDA_Pilot-6678314033/HITS.45006595._052918.pool.root.1 since it does not exist
[2025-06-04 16:05:49] 2025-06-04 15:05:36,182 | INFO     | 
[2025-06-04 16:05:49] 2025-06-04 15:05:36,182 | INFO     | job summary report
[2025-06-04 16:05:49] 2025-06-04 15:05:36,183 | INFO     | --------------------------------------------------
[2025-06-04 16:05:49] 2025-06-04 15:05:36,183 | INFO     | PanDA job id: 6678314033
[2025-06-04 16:05:49] 2025-06-04 15:05:36,183 | INFO     | task id: 45006595
[2025-06-04 16:05:49] 2025-06-04 15:05:36,183 | INFO     | errors: (none)
[2025-06-04 16:05:49] 2025-06-04 15:05:36,183 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:05:49] 2025-06-04 15:05:36,183 | INFO     | pilot state: finished 
[2025-06-04 16:05:49] 2025-06-04 15:05:36,183 | INFO     | transexitcode: 0
[2025-06-04 16:05:49] 2025-06-04 15:05:36,183 | INFO     | exeerrorcode: 0
[2025-06-04 16:05:49] 2025-06-04 15:05:36,183 | INFO     | exeerrordiag: 
[2025-06-04 16:05:49] 2025-06-04 15:05:36,183 | INFO     | exitcode: 0
[2025-06-04 16:05:49] 2025-06-04 15:05:36,183 | INFO     | exitmsg: OK
[2025-06-04 16:05:49] 2025-06-04 15:05:36,183 | INFO     | cpuconsumptiontime: 36394 s
[2025-06-04 16:05:49] 2025-06-04 15:05:36,184 | INFO     | nevents: 400
[2025-06-04 16:05:49] 2025-06-04 15:05:36,184 | INFO     | neventsw: 0
[2025-06-04 16:05:49] 2025-06-04 15:05:36,184 | INFO     | pid: 3896362
[2025-06-04 16:05:49] 2025-06-04 15:05:36,184 | INFO     | pgrp: 3896362
[2025-06-04 16:05:49] 2025-06-04 15:05:36,184 | INFO     | corecount: 4
[2025-06-04 16:05:49] 2025-06-04 15:05:36,184 | INFO     | event service: False
[2025-06-04 16:05:49] 2025-06-04 15:05:36,184 | INFO     | sizes: {0: 2397350, 5: 2397556, 11: 2397612, 9495: 2425683, 9496: 2434696, 9503: 2434838}
[2025-06-04 16:05:49] 2025-06-04 15:05:36,184 | INFO     | --------------------------------------------------
[2025-06-04 16:05:49] 2025-06-04 15:05:36,184 | INFO     | 
[2025-06-04 16:05:49] 2025-06-04 15:05:36,184 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/15
[2025-06-04 16:05:49] 2025-06-04 15:05:36,208 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:05:49] 2025-06-04 15:05:36,208 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:05:49] 2025-06-04 15:05:36,209 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:05:49] 2025-06-04 15:05:36,209 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:05:49] 2025-06-04 15:05:36,209 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:05:49] 2025-06-04 15:05:36,209 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:05:49] 2025-06-04 15:05:36,209 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:05:49] 2025-06-04 15:05:36,209 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:05:49] 2025-06-04 15:05:36,209 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:05:49] 2025-06-04 15:05:36,210 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:05:49] 2025-06-04 15:05:36,210 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:05:49] 2025-06-04 15:05:36,210 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:05:49] 2025-06-04 15:05:36,210 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:05:49] 2025-06-04 15:05:36,210 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:05:49] 2025-06-04 15:05:36,210 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:05:49] 2025-06-04 15:05:36,210 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:05:49] 2025-06-04 15:05:36,210 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:05:49] 2025-06-04 15:05:36,210 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:05:49] 2025-06-04 15:05:36,211 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:05:49] 2025-06-04 15:05:36,211 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:05:49] 2025-06-04 15:05:36,211 | INFO     | job 6678314033 has completed (purged errors)
[2025-06-04 16:05:49] 2025-06-04 15:05:36,211 | INFO     | overall cleanup function is called
[2025-06-04 16:05:49] 2025-06-04 15:05:36,453 | INFO     | number of running child processes to parent process 3896362: 1
[2025-06-04 16:05:49] 2025-06-04 15:05:36,453 | INFO     | maximum number of monitored processes: 6
[2025-06-04 16:05:49] 2025-06-04 15:05:36,454 | INFO     | aborting job monitoring since job object (job id=6678314033) has expired
[2025-06-04 16:05:49] 2025-06-04 15:05:37,216 | INFO     | --- collectZombieJob: --- 10, [3896362]
[2025-06-04 16:05:49] 2025-06-04 15:05:37,216 | INFO     | zombie collector waiting for pid 3896362
[2025-06-04 16:05:49] 2025-06-04 15:05:37,216 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:05:49] 2025-06-04 15:05:37,216 | INFO     | collected zombie processes
[2025-06-04 16:05:49] 2025-06-04 15:05:37,216 | INFO     | will attempt to kill all subprocesses of pid=3896362
[2025-06-04 16:05:49] 2025-06-04 15:05:37,476 | INFO     | process IDs to be killed: [3896362] (in reverse order)
[2025-06-04 16:05:49] 2025-06-04 15:05:37,594 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:05:49] 2025-06-04 15:05:37,594 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:05:49] 2025-06-04 15:05:37,602 | INFO     | did not find any defunct processes belonging to 3896362
[2025-06-04 16:05:49] 2025-06-04 15:05:37,608 | INFO     | did not find any defunct processes belonging to 3896362
[2025-06-04 16:05:49] 2025-06-04 15:05:37,609 | INFO     | ready for new job
[2025-06-04 16:05:49] 2025-06-04 15:05:37,609 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:05:49] 2025-06-04 15:05:37,611 | INFO     | **************************************
[2025-06-04 16:05:49] 2025-06-04 15:05:37,611 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:05:49] 2025-06-04 15:05:37,611 | INFO     | **************************************
[2025-06-04 16:05:49] 2025-06-04 15:05:37,611 | INFO     | 
[2025-06-04 16:05:49] 2025-06-04 15:05:37,614 | INFO     | pilot is running in a VM
[2025-06-04 16:05:49] 2025-06-04 15:05:37,614 | INFO     | architecture information:
[2025-06-04 16:05:49] 2025-06-04 15:05:37,615 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:05:49] 2025-06-04 15:05:37,631 | INFO     | cat /etc/os-release:
[2025-06-04 16:05:49] NAME="CentOS Linux"
[2025-06-04 16:05:49] VERSION="7 (Core)"
[2025-06-04 16:05:49] ID="centos"
[2025-06-04 16:05:49] ID_LIKE="rhel fedora"
[2025-06-04 16:05:49] VERSION_ID="7"
[2025-06-04 16:05:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:05:49] ANSI_COLOR="0;31"
[2025-06-04 16:05:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:05:49] HOME_URL="https://www.centos.org/"
[2025-06-04 16:05:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:05:49] 
[2025-06-04 16:05:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:05:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:05:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:05:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:05:49] 
[2025-06-04 16:05:49] 2025-06-04 15:05:37,631 | INFO     | **************************************
[2025-06-04 16:05:49] 2025-06-04 15:05:38,132 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/15
[2025-06-04 16:05:49] 2025-06-04 15:05:38,155 | INFO     | sufficient remaining disk space (112430415872 B)
[2025-06-04 16:05:49] 2025-06-04 15:05:38,156 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:05:49] 2025-06-04 15:05:38,156 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:05:49] 2025-06-04 15:05:38,156 | INFO     | update_server=False
[2025-06-04 16:05:49] 2025-06-04 15:05:38,156 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:05:49] 2025-06-04 15:05:38,157 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:05:49] 2025-06-04 15:05:38,157 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:05:49] 2025-06-04 15:05:38,158 | INFO     | aborting loop
[2025-06-04 16:05:49] 2025-06-04 15:05:38,241 | INFO     | all job control threads have been joined
[2025-06-04 16:05:49] 2025-06-04 15:05:38,687 | INFO     | all payload control threads have been joined
[2025-06-04 16:05:49] 2025-06-04 15:05:38,775 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:05:49] 2025-06-04 15:05:38,775 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:05:49] 2025-06-04 15:05:38,775 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:05:49] 2025-06-04 15:05:39,162 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:05:49] 2025-06-04 15:05:39,162 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:05:49] 2025-06-04 15:05:39,163 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:05:49] 2025-06-04 15:05:39,229 | INFO     | all data control threads have been joined
[2025-06-04 16:05:49] 2025-06-04 15:05:39,246 | INFO     | [job] control thread has finished
[2025-06-04 16:05:49] 2025-06-04 15:05:39,335 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:05:49] 2025-06-04 15:05:39,338 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:05:49] 2025-06-04 15:05:39,574 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:05:49] 2025-06-04 15:05:39,660 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:05:49] 2025-06-04 15:05:39,692 | INFO     | [payload] control thread has finished
[2025-06-04 16:05:49] 2025-06-04 15:05:39,699 | INFO     | [job] validate thread has finished
[2025-06-04 16:05:49] 2025-06-04 15:05:39,843 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:05:49] 2025-06-04 15:05:39,899 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:05:49] 2025-06-04 15:05:40,119 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:05:49] 2025-06-04 15:05:40,168 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:05:49] 2025-06-04 15:05:40,231 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:05:49] 2025-06-04 15:05:40,235 | INFO     | [data] control thread has finished
[2025-06-04 16:05:49] 2025-06-04 15:05:41,580 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:05:49] 2025-06-04 15:05:43,666 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:05:49] 2025-06-04 15:05:44,253 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137610344163136)>', '<ExcThread(monitor, started 137609661634304)>']
[2025-06-04 16:05:49] 2025-06-04 15:05:44,805 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:05:49] 2025-06-04 15:05:44,805 | INFO     | [monitor] control thread has ended
[2025-06-04 16:05:49] 2025-06-04 15:05:49,279 | INFO     | all workflow threads have been joined
[2025-06-04 16:05:49] 2025-06-04 15:05:49,279 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:05:49] 2025-06-04 15:05:49,279 | INFO     | traces error code: 0
[2025-06-04 16:05:49] 2025-06-04 15:05:49,280 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:05:49] 2025-06-04 15:05:49,453 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:05:49] 2025-06-04 15:05:49,456 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:05:49] 2025-06-04 15:05:49,460 [wrapper] pilotpid: 3875863
[2025-06-04 16:05:49] 2025-06-04 15:05:49,463 [wrapper] Pilot exit status: 0
[2025-06-04 16:05:49] 2025-06-04 15:05:49,475 [wrapper] pandaids: 6678314033
[2025-06-04 16:05:49] 2025-06-04 15:05:49,548 [wrapper] cleanup supervisor_pilot 4160076 3875864
[2025-06-04 16:05:49] 2025-06-04 15:05:49,551 [wrapper] Test setup, not cleaning
[2025-06-04 16:05:49] 2025-06-04 15:05:49,554 [wrapper] apfmon messages muted
[2025-06-04 16:05:49] 2025-06-04 15:05:49,557 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:05:49] 2025-06-04 15:05:49,560 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:05:49]  *** Error codes and diagnostics ***
[2025-06-04 16:05:49]     "exeErrorCode": 0,
[2025-06-04 16:05:49]     "exeErrorDiag": "",
[2025-06-04 16:05:49]     "pilotErrorCode": 0,
[2025-06-04 16:05:49]     "pilotErrorDiag": "",
[2025-06-04 16:05:49]  *** Listing of results directory ***
[2025-06-04 16:05:49] total 391928
[2025-06-04 16:05:49] -rw-r--r-- 1 boinc boinc    495897 Jun  4 05:58 pilot3.tar.gz
[2025-06-04 16:05:49] -rwx------ 1 boinc boinc     37140 Jun  4 06:07 runpilot2-wrapper.sh
[2025-06-04 16:05:49] -rw-r--r-- 1 boinc boinc      5111 Jun  4 06:07 queuedata.json
[2025-06-04 16:05:49] -rw-r--r-- 1 boinc boinc       100 Jun  4 13:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:05:49] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 13:26 run_atlas
[2025-06-04 16:05:49] -rw-r--r-- 1 boinc boinc       105 Jun  4 13:26 job.xml
[2025-06-04 16:05:49] -rw-r--r-- 2 boinc boinc 214492542 Jun  4 13:26 EVNT.45006593._002119.pool.root.1
[2025-06-04 16:05:49] -rw-r--r-- 2 boinc boinc     15093 Jun  4 13:26 start_atlas.sh
[2025-06-04 16:05:49] drwxrwx--x 2 boinc boinc      4096 Jun  4 13:26 shared
[2025-06-04 16:05:49] -rw-r--r-- 2 boinc boinc    508883 Jun  4 13:26 input.tar.gz
[2025-06-04 16:05:49] -rw-r--r-- 1 boinc boinc      6663 Jun  4 13:26 init_data.xml
[2025-06-04 16:05:49] -rw-r--r-- 1 boinc boinc         0 Jun  4 13:26 boinc_lockfile
[2025-06-04 16:05:49] -rw-r--r-- 1 boinc boinc      2525 Jun  4 13:26 pandaJob.out
[2025-06-04 16:05:49] -rw------- 1 boinc boinc    986811 Jun  4 13:26 agis_schedconf.cvmfs.json
[2025-06-04 16:05:49] -rw------- 1 boinc boinc   1598969 Jun  4 13:26 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:05:49] drwx------ 4 boinc boinc      4096 Jun  4 13:26 pilot3
[2025-06-04 16:05:49] -rw------- 1 boinc boinc 180646588 Jun  4 16:04 HITS.45006595._052918.pool.root.1
[2025-06-04 16:05:49] -rw-r--r-- 1 boinc boinc       530 Jun  4 16:04 boinc_task_state.xml
[2025-06-04 16:05:49] -rw------- 1 boinc boinc        95 Jun  4 16:05 pilot_heartbeat.json
[2025-06-04 16:05:49] -rw------- 1 boinc boinc      1030 Jun  4 16:05 memory_monitor_summary.json
[2025-06-04 16:05:49] -rw------- 1 boinc boinc    292776 Jun  4 16:05 log.45006595._052918.job.log.tgz.1
[2025-06-04 16:05:49] -rw------- 1 boinc boinc      7681 Jun  4 16:05 heartbeat.json
[2025-06-04 16:05:49] -rw-r--r-- 1 boinc boinc        27 Jun  4 16:05 wrapper_checkpoint.txt
[2025-06-04 16:05:49] -rw-r--r-- 1 boinc boinc      8192 Jun  4 16:05 boinc_mmap_file
[2025-06-04 16:05:49] -rw------- 1 boinc boinc      4424 Jun  4 16:05 pilotlog.txt
[2025-06-04 16:05:49] -rw------- 1 boinc boinc    887823 Jun  4 16:05 log.45006595._052918.job.log.1
[2025-06-04 16:05:49] -rw------- 1 boinc boinc       357 Jun  4 16:05 output.list
[2025-06-04 16:05:49] -rw-r--r-- 1 boinc boinc       620 Jun  4 16:05 runtime_log
[2025-06-04 16:05:49] -rw------- 1 boinc boinc   1198080 Jun  4 16:05 result.tar.gz
[2025-06-04 16:05:49] -rw-r--r-- 1 boinc boinc      8762 Jun  4 16:05 runtime_log.err
[2025-06-04 16:05:49] -rw------- 1 boinc boinc       650 Jun  4 16:05 J5BNDmzWvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUInKDmX9xKrn.diag
[2025-06-04 16:05:49] -rw-r--r-- 1 boinc boinc     20869 Jun  4 16:05 stderr.txt
[2025-06-04 16:05:49] HITS file was successfully produced:
[2025-06-04 16:05:49] -rw------- 1 boinc boinc 180646588 Jun  4 16:04 shared/HITS.pool.root.1
[2025-06-04 16:05:49]  *** Contents of shared directory: ***
[2025-06-04 16:05:49] total 387580
[2025-06-04 16:05:49] -rw-r--r-- 2 boinc boinc 214492542 Jun  4 13:26 ATLAS.root_0
[2025-06-04 16:05:49] -rw-r--r-- 2 boinc boinc     15093 Jun  4 13:26 start_atlas.sh
[2025-06-04 16:05:49] -rw-r--r-- 2 boinc boinc    508883 Jun  4 13:26 input.tar.gz
[2025-06-04 16:05:49] -rw------- 1 boinc boinc 180646588 Jun  4 16:04 HITS.pool.root.1
[2025-06-04 16:05:49] -rw------- 1 boinc boinc   1198080 Jun  4 16:05 result.tar.gz
16:05:50 (3871748): run_atlas exited; CPU time 36733.226963
16:05:50 (3871748): called boinc_finish(0)

</stderr_txt>
]]>

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